View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14943_low_3 (Length: 489)

Name: NF14943_low_3
Description: NF14943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14943_low_3
NF14943_low_3
[»] chr3 (56 HSPs)
chr3 (128-291)||(19984846-19985010)
chr3 (128-290)||(19986010-19986175)
chr3 (128-299)||(22776752-22776924)
chr3 (128-289)||(54540730-54540892)
chr3 (129-290)||(7758400-7758563)
chr3 (128-288)||(49216247-49216408)
chr3 (128-290)||(12700173-12700335)
chr3 (128-290)||(7267642-7267804)
chr3 (131-299)||(29932641-29932810)
chr3 (131-299)||(29981795-29981964)
chr3 (128-292)||(29931222-29931388)
chr3 (128-292)||(29980376-29980542)
chr3 (151-285)||(54986970-54987103)
chr3 (139-289)||(55191946-55192096)
chr3 (160-288)||(46719941-46720070)
chr3 (159-290)||(534497-534629)
chr3 (128-287)||(8456479-8456639)
chr3 (128-271)||(6171183-6171324)
chr3 (128-291)||(7268767-7268930)
chr3 (128-288)||(47614185-47614347)
chr3 (128-289)||(54539754-54539916)
chr3 (152-261)||(31645001-31645110)
chr3 (157-293)||(51469967-51470104)
chr3 (158-289)||(46721190-46721322)
chr3 (128-294)||(47610519-47610687)
chr3 (128-257)||(23770346-23770476)
chr3 (160-290)||(34019117-34019246)
chr3 (213-294)||(12703525-12703606)
chr3 (158-290)||(23769855-23769987)
chr3 (128-291)||(51347265-51347430)
chr3 (133-264)||(6250522-6250652)
chr3 (160-290)||(11671313-11671443)
chr3 (158-288)||(51037536-51037666)
chr3 (129-289)||(52839036-52839197)
chr3 (159-290)||(8875904-8876036)
chr3 (158-290)||(47609695-47609828)
chr3 (157-290)||(51470424-51470557)
chr3 (187-289)||(24516459-24516562)
chr3 (128-205)||(47615516-47615594)
chr3 (213-294)||(51038815-51038897)
chr3 (213-290)||(5029708-5029785)
chr3 (213-294)||(28262187-28262268)
chr3 (128-285)||(49398130-49398287)
chr3 (162-285)||(52104484-52104604)
chr3 (214-300)||(5001188-5001275)
chr3 (237-290)||(47615597-47615651)
chr3 (232-296)||(27852998-27853063)
chr3 (216-288)||(53901416-53901487)
chr3 (128-227)||(4271502-4271601)
chr3 (128-174)||(49220492-49220538)
chr3 (213-290)||(53614817-53614895)
chr3 (157-261)||(6249637-6249740)
chr3 (158-285)||(40426748-40426877)
chr3 (138-247)||(54654256-54654365)
chr3 (197-288)||(535791-535883)
chr3 (237-281)||(22775783-22775827)
[»] chr1 (54 HSPs)
chr1 (145-289)||(45157166-45157310)
chr1 (128-285)||(39153056-39153214)
chr1 (128-264)||(39151956-39152092)
chr1 (128-288)||(45148581-45148741)
chr1 (162-290)||(51685739-51685868)
chr1 (128-293)||(14999280-14999442)
chr1 (145-264)||(45156074-45156193)
chr1 (128-289)||(11436041-11436204)
chr1 (128-290)||(45149910-45150073)
chr1 (128-288)||(39699707-39699867)
chr1 (159-290)||(43059977-43060109)
chr1 (129-290)||(11437139-11437302)
chr1 (128-289)||(44404441-44404603)
chr1 (129-288)||(39222413-39222575)
chr1 (159-290)||(43058784-43058915)
chr1 (158-288)||(51684366-51684497)
chr1 (128-254)||(44411906-44412032)
chr1 (134-285)||(24426020-24426173)
chr1 (405-470)||(31610615-31610680)
chr1 (128-290)||(24422798-24422962)
chr1 (159-291)||(50680329-50680461)
chr1 (159-291)||(35066973-35067106)
chr1 (128-293)||(36613843-36614010)
chr1 (128-289)||(52274967-52275130)
chr1 (128-290)||(35595131-35595296)
chr1 (162-289)||(36612852-36612979)
chr1 (128-289)||(35594216-35594377)
chr1 (213-289)||(33088642-33088719)
chr1 (132-290)||(52276106-52276266)
chr1 (158-289)||(52827346-52827478)
chr1 (159-285)||(30249461-30249588)
chr1 (157-288)||(41364829-41364960)
chr1 (213-291)||(7674525-7674602)
chr1 (213-290)||(23980491-23980569)
chr1 (159-233)||(30248168-30248241)
chr1 (157-290)||(52828039-52828173)
chr1 (158-291)||(7983047-7983180)
chr1 (159-292)||(25652711-25652844)
chr1 (216-288)||(50681632-50681705)
chr1 (134-289)||(14999901-15000057)
chr1 (158-261)||(40384753-40384856)
chr1 (128-261)||(43378652-43378786)
chr1 (139-289)||(39698562-39698712)
chr1 (158-301)||(46066512-46066653)
chr1 (209-292)||(16290089-16290174)
chr1 (159-233)||(31194109-31194183)
chr1 (179-291)||(7675450-7675562)
chr1 (196-290)||(11190383-11190478)
chr1 (238-289)||(21945707-21945758)
chr1 (128-227)||(33088129-33088228)
chr1 (159-285)||(37526849-37526975)
chr1 (158-288)||(2940266-2940396)
chr1 (237-294)||(41366179-41366237)
chr1 (159-191)||(39221412-39221444)
[»] chr5 (43 HSPs)
chr5 (128-285)||(24332916-24333074)
chr5 (128-289)||(19752911-19753073)
chr5 (128-290)||(28538674-28538837)
chr5 (158-285)||(2186774-2186901)
chr5 (128-285)||(28539760-28539917)
chr5 (128-290)||(25523067-25523231)
chr5 (128-291)||(40255612-40255776)
chr5 (128-289)||(36486428-36486590)
chr5 (128-290)||(18486841-18487005)
chr5 (128-288)||(20214196-20214357)
chr5 (129-288)||(22940563-22940723)
chr5 (158-294)||(42196170-42196307)
chr5 (128-231)||(16650050-16650154)
chr5 (128-291)||(33160227-33160390)
chr5 (160-290)||(16650827-16650958)
chr5 (167-289)||(21835040-21835162)
chr5 (128-293)||(25055407-25055574)
chr5 (158-285)||(42195137-42195263)
chr5 (128-290)||(5778775-5778939)
chr5 (128-294)||(1015478-1015645)
chr5 (159-291)||(19754101-19754235)
chr5 (132-286)||(36485302-36485457)
chr5 (212-288)||(21834943-21835019)
chr5 (128-288)||(25056319-25056482)
chr5 (128-289)||(1797237-1797398)
chr5 (159-248)||(25524069-25524158)
chr5 (199-289)||(33158097-33158188)
chr5 (213-294)||(18485132-18485214)
chr5 (213-290)||(20216788-20216866)
chr5 (215-261)||(34893693-34893739)
chr5 (128-257)||(1016804-1016932)
chr5 (213-291)||(25524152-25524232)
chr5 (213-288)||(1796054-1796130)
chr5 (214-290)||(5777899-5777974)
chr5 (157-260)||(5730831-5730934)
chr5 (197-261)||(7311618-7311682)
chr5 (214-290)||(5730439-5730517)
chr5 (128-219)||(5961476-5961567)
chr5 (131-261)||(5962515-5962645)
chr5 (220-288)||(2188962-2189030)
chr5 (213-290)||(2685744-2685820)
chr5 (213-291)||(18154491-18154569)
chr5 (129-257)||(38834119-38834246)
[»] chr2 (39 HSPs)
chr2 (128-289)||(802531-802692)
chr2 (128-289)||(22587894-22588055)
chr2 (128-300)||(38840433-38840606)
chr2 (128-294)||(36449772-36449939)
chr2 (128-264)||(810721-810857)
chr2 (159-290)||(18905959-18906090)
chr2 (128-261)||(22587529-22587661)
chr2 (159-287)||(13030293-13030419)
chr2 (132-289)||(11258754-11258913)
chr2 (128-290)||(41879152-41879315)
chr2 (128-290)||(7899822-7899985)
chr2 (131-290)||(36450864-36451023)
chr2 (158-288)||(18299373-18299504)
chr2 (128-289)||(22848190-22848353)
chr2 (128-297)||(7898682-7898852)
chr2 (158-257)||(11996739-11996838)
chr2 (128-291)||(18797243-18797409)
chr2 (128-290)||(38839240-38839403)
chr2 (160-294)||(18300697-18300829)
chr2 (149-288)||(41878092-41878234)
chr2 (158-261)||(24475252-24475355)
chr2 (164-290)||(23869511-23869637)
chr2 (213-285)||(13567975-13568048)
chr2 (159-275)||(18869133-18869251)
chr2 (213-290)||(18904365-18904443)
chr2 (159-290)||(11938760-11938891)
chr2 (213-261)||(32739651-32739699)
chr2 (128-248)||(32739693-32739812)
chr2 (128-289)||(11257621-11257783)
chr2 (158-261)||(26545491-26545594)
chr2 (213-290)||(18868922-18869000)
chr2 (214-288)||(1034495-1034570)
chr2 (159-261)||(28617950-28618051)
chr2 (158-231)||(26544206-26544279)
chr2 (237-289)||(21837304-21837355)
chr2 (208-288)||(24476864-24476943)
chr2 (237-288)||(21837070-21837120)
chr2 (237-287)||(1033212-1033262)
chr2 (216-289)||(5819741-5819814)
[»] chr4 (50 HSPs)
chr4 (128-290)||(1290137-1290301)
chr4 (128-288)||(31600925-31601086)
chr4 (128-290)||(10448200-10448363)
chr4 (128-288)||(10447006-10447168)
chr4 (128-285)||(12129626-12129785)
chr4 (128-289)||(31599788-31599950)
chr4 (197-290)||(26421631-26421724)
chr4 (158-286)||(19750545-19750673)
chr4 (158-286)||(19789133-19789261)
chr4 (158-290)||(37728535-37728667)
chr4 (128-290)||(5526065-5526228)
chr4 (140-285)||(8758789-8758935)
chr4 (213-291)||(49308052-49308130)
chr4 (158-288)||(1834119-1834251)
chr4 (128-290)||(1835041-1835205)
chr4 (128-290)||(25685761-25685925)
chr4 (150-288)||(50909634-50909774)
chr4 (129-290)||(1289095-1289258)
chr4 (140-290)||(8757673-8757822)
chr4 (128-290)||(21177995-21178157)
chr4 (158-290)||(1963194-1963327)
chr4 (213-294)||(17382987-17383068)
chr4 (128-292)||(17388150-17388315)
chr4 (128-285)||(35934347-35934503)
chr4 (158-288)||(25684934-25685065)
chr4 (159-290)||(49306773-49306903)
chr4 (128-288)||(10471327-10471489)
chr4 (128-292)||(52491549-52491712)
chr4 (158-289)||(10470545-10470677)
chr4 (158-290)||(13509329-13509461)
chr4 (128-290)||(13386012-13386178)
chr4 (212-285)||(55602379-55602452)
chr4 (197-257)||(27257969-27258029)
chr4 (158-289)||(5525359-5525490)
chr4 (159-285)||(8155741-8155867)
chr4 (128-191)||(54107957-54108020)
chr4 (129-285)||(35935474-35935631)
chr4 (128-290)||(46637680-46637844)
chr4 (158-257)||(37727729-37727827)
chr4 (159-289)||(3927665-3927796)
chr4 (159-289)||(3928829-3928960)
chr4 (214-289)||(14868889-14868964)
chr4 (214-289)||(14876970-14877045)
chr4 (172-291)||(50909270-50909388)
chr4 (214-290)||(48780246-48780323)
chr4 (213-288)||(1964466-1964542)
chr4 (185-257)||(21539068-21539140)
chr4 (214-289)||(48781072-48781147)
chr4 (214-289)||(13386558-13386635)
chr4 (213-290)||(55603556-55603633)
[»] chr7 (35 HSPs)
chr7 (128-290)||(7501791-7501955)
chr7 (129-288)||(18371424-18371585)
chr7 (128-290)||(42886226-42886389)
chr7 (161-291)||(21505413-21505542)
chr7 (159-275)||(18372428-18372544)
chr7 (128-261)||(22629514-22629648)
chr7 (134-283)||(14999101-14999249)
chr7 (128-291)||(46482594-46482759)
chr7 (159-290)||(22630423-22630555)
chr7 (159-289)||(7500454-7500584)
chr7 (128-288)||(31659622-31659785)
chr7 (157-287)||(3227109-3227239)
chr7 (157-290)||(31949320-31949454)
chr7 (157-290)||(127335-127467)
chr7 (214-292)||(17782579-17782658)
chr7 (157-290)||(3227563-3227697)
chr7 (213-294)||(11658373-11658455)
chr7 (128-289)||(34352726-34352888)
chr7 (128-288)||(47525306-47525468)
chr7 (128-205)||(14998064-14998140)
chr7 (158-286)||(17781663-17781792)
chr7 (217-289)||(20163585-20163658)
chr7 (197-261)||(34351520-34351584)
chr7 (132-289)||(31660953-31661111)
chr7 (157-291)||(31949771-31949906)
chr7 (215-290)||(34174010-34174085)
chr7 (159-261)||(47369809-47369911)
chr7 (213-285)||(11662576-11662649)
chr7 (213-288)||(48934928-48935004)
chr7 (215-281)||(47524532-47524599)
chr7 (197-292)||(48933664-48933759)
chr7 (233-290)||(21508449-21508505)
chr7 (134-191)||(32253373-32253430)
chr7 (207-290)||(597303-597383)
chr7 (128-168)||(34351609-34351649)
[»] chr8 (46 HSPs)
chr8 (139-290)||(24122881-24123032)
chr8 (142-279)||(18970920-18971057)
chr8 (158-288)||(30336471-30336602)
chr8 (159-293)||(5513977-5514111)
chr8 (128-288)||(10006344-10006506)
chr8 (128-294)||(12353301-12353466)
chr8 (128-285)||(30570196-30570353)
chr8 (158-290)||(8389659-8389792)
chr8 (159-283)||(1824049-1824174)
chr8 (159-283)||(1858494-1858619)
chr8 (129-290)||(30568885-30569046)
chr8 (128-292)||(10007702-10007868)
chr8 (129-279)||(18978029-18978179)
chr8 (128-288)||(22220388-22220550)
chr8 (158-289)||(30335638-30335770)
chr8 (134-257)||(18488208-18488331)
chr8 (158-290)||(2379894-2380023)
chr8 (158-289)||(8388463-8388593)
chr8 (128-285)||(11287779-11287937)
chr8 (142-287)||(18979074-18979220)
chr8 (128-300)||(45114457-45114629)
chr8 (149-261)||(24123859-24123971)
chr8 (165-289)||(32207302-32207425)
chr8 (128-290)||(17844276-17844435)
chr8 (159-289)||(22221335-22221466)
chr8 (159-289)||(22227677-22227808)
chr8 (159-290)||(11282006-11282138)
chr8 (158-285)||(40471117-40471244)
chr8 (160-289)||(1823551-1823682)
chr8 (160-289)||(1857996-1858127)
chr8 (158-289)||(24359808-24359938)
chr8 (128-289)||(12351920-12352082)
chr8 (215-285)||(29968364-29968434)
chr8 (151-260)||(29043427-29043536)
chr8 (158-246)||(24361164-24361251)
chr8 (158-289)||(43661793-43661925)
chr8 (128-257)||(43661297-43661427)
chr8 (213-290)||(5514295-5514372)
chr8 (237-288)||(24483143-24483195)
chr8 (208-290)||(42982677-42982760)
chr8 (159-288)||(32973907-32974037)
chr8 (231-290)||(11456636-11456696)
chr8 (159-290)||(32968454-32968586)
chr8 (149-288)||(36249552-36249692)
chr8 (158-235)||(2378914-2378991)
chr8 (223-288)||(23170034-23170098)
[»] scaffold1303 (1 HSPs)
scaffold1303 (158-291)||(1436-1570)
[»] scaffold0019 (2 HSPs)
scaffold0019 (158-288)||(60090-60221)
scaffold0019 (158-287)||(61429-61559)
[»] chr6 (34 HSPs)
chr6 (128-285)||(1829543-1829701)
chr6 (128-288)||(7314880-7315041)
chr6 (131-290)||(16704440-16704600)
chr6 (133-285)||(26574999-26575150)
chr6 (158-290)||(6842253-6842386)
chr6 (128-291)||(7316233-7316398)
chr6 (167-289)||(3333005-3333128)
chr6 (128-275)||(10785853-10786000)
chr6 (158-291)||(27437825-27437959)
chr6 (128-290)||(8659263-8659427)
chr6 (128-289)||(3721611-3721774)
chr6 (171-290)||(8821871-8821991)
chr6 (145-290)||(26574617-26574762)
chr6 (128-261)||(26949125-26949255)
chr6 (159-292)||(27322039-27322172)
chr6 (162-290)||(6840192-6840319)
chr6 (128-283)||(29473082-29473238)
chr6 (128-291)||(14823515-14823680)
chr6 (214-290)||(3722533-3722610)
chr6 (158-235)||(5658810-5658887)
chr6 (128-287)||(12382650-12382811)
chr6 (158-289)||(8660174-8660305)
chr6 (159-261)||(17496825-17496928)
chr6 (214-288)||(8822819-8822894)
chr6 (133-219)||(26717057-26717144)
chr6 (197-255)||(12350832-12350889)
chr6 (214-291)||(27318312-27318389)
chr6 (128-290)||(14822358-14822521)
chr6 (213-288)||(3333149-3333224)
chr6 (159-234)||(3333496-3333571)
chr6 (232-291)||(4597652-4597712)
chr6 (128-179)||(27443860-27443912)
chr6 (236-291)||(27447961-27448017)
chr6 (241-292)||(34834632-34834684)
[»] scaffold0320 (1 HSPs)
scaffold0320 (159-290)||(19486-19618)
[»] scaffold0003 (3 HSPs)
scaffold0003 (158-291)||(49403-49537)
scaffold0003 (236-291)||(39341-39397)
scaffold0003 (128-179)||(43449-43501)
[»] scaffold0302 (2 HSPs)
scaffold0302 (132-290)||(17468-17627)
scaffold0302 (139-288)||(18727-18877)
[»] scaffold2034 (2 HSPs)
scaffold2034 (128-288)||(233-394)
scaffold2034 (128-257)||(918-1047)
[»] scaffold0294 (2 HSPs)
scaffold0294 (158-290)||(5408-5541)
scaffold0294 (158-290)||(4440-4573)
[»] scaffold0586 (2 HSPs)
scaffold0586 (171-290)||(6341-6461)
scaffold0586 (159-291)||(8998-9129)
[»] scaffold0632 (1 HSPs)
scaffold0632 (128-290)||(3248-3410)
[»] scaffold0369 (1 HSPs)
scaffold0369 (175-299)||(13182-13305)
[»] scaffold0049 (2 HSPs)
scaffold0049 (167-299)||(7394-7527)
scaffold0049 (212-288)||(7538-7614)
[»] scaffold0186 (1 HSPs)
scaffold0186 (216-288)||(23081-23152)
[»] scaffold0059 (2 HSPs)
scaffold0059 (128-261)||(3703-3836)
scaffold0059 (128-287)||(4670-4829)
[»] scaffold0093 (2 HSPs)
scaffold0093 (158-287)||(2435-2564)
scaffold0093 (158-287)||(7058-7187)
[»] scaffold0045 (1 HSPs)
scaffold0045 (158-259)||(48339-48437)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 128 - 291
Target Start/End: Complemental strand, 19985010 - 19984846
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||||    
T  19985010 cacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagttttt 19984911  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
    |||||||| ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  19984910 gtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcctat 19984846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 19986010 - 19986175
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||| ||||||| | ||||||||||| ||||| |||||||||||||||    
T  19986010 cacacgtggcatgccacgtaggcattgactggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagttttt 19986109  T
Q  228 gtacatag--agggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
     |||||||   ||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19986110 atacataggaggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagccta 19986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 128 - 299
Target Start/End: Original strand, 22776752 - 22776924
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| |||||||||||   ||| |||||||| ||||||| | | ||| |||||  |||  |||||||||||||||    
T  22776752 cacacgtggcatgccacgtaggcattgaccggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagttttt 22776851  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctatattctatt 299  Q
    |||||||| ||||||||||||||| ||| ||||| || | || ||||||||||||||||||||||||| ||||    
T  22776852 gtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagcctatattttatt 22776924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 54540730 - 54540892
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||  |||||| | | |||||||||  |||  |||||||||||||||    
T  54540730 cacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagttttt 54540829  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||| ||  ||| ||||||||||||||||||||| ||  | ||||||||||||||||||||||    
T  54540830 gtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 290
Target Start/End: Complemental strand, 7758563 - 7758400
Alignment:
Q  129 acacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||  || || ||||| ||||||||||||||||||||||||||| || |||| | |||||||||||  |||  |||||||||||||||    
T  7758563 acacgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagttttt 7758464  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||| ||| ||||||||||||||||||||| ||  | ||| |||||||||||||||||||    
T  7758463 gtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 7758400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 49216408 - 49216247
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||| ||||||| |||| ||||||  ||||||||||| |||||| || |||| ||||||| ||| |||||||||| |||  | |||||||||||||    
T  49216408 cacacgtgacatgccacgtagacattgatcggtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggacataattgtagttttt 49216309  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||||||| ||| ||||||||||| ||||||||||||  | | |||||||||||||||||||    
T  49216308 gtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagcc 49216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 12700335 - 12700173
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||||||||||||||||| ||||||    | |||||| ||  |||| ||||||||||||||    
T  12700335 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttt 12700236  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||| ||| ||||||||||||||||||||||||| || | |||| ||||||||||||||||||    
T  12700235 tgtacttagggggccaaaattgcaagtttttgaaagttag-gggggaaagtgcactttagccta 12700173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 7267804 - 7267642
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||||||||  |||  |||||    | |||||||||  |||  ||||||||||||| |    
T  7267804 cacacgtggcgtgccatgtatgcattgaccggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttct 7267705  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||| ||| ||||||||||||||||||||||||| ||   |||||||||||||||||| ||||    
T  7267704 gtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttaaccta 7267642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 299
Target Start/End: Original strand, 29932641 - 29932810
Alignment:
Q  131 acgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgt 229  Q
    ||||||||||||| | || | ||||| |||||||||||| |||||||||| |  | |||||| |   |||||||||| |||| |||||||||||||||||    
T  29932641 acgtggcatgccaggaagacgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgt 29932740  T
Q  230 acatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcctatattctatt 299  Q
    || ||| ||||||||||||||||||||||||| || || ||||||||||||||||||||||  ||||||||    
T  29932741 acttag-gggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccttaattctatt 29932810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 299
Target Start/End: Original strand, 29981795 - 29981964
Alignment:
Q  131 acgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgt 229  Q
    ||||||||||||| | || | ||||| |||||||||||| |||||||||| |  | |||||| |   |||||||||| |||| |||||||||||||||||    
T  29981795 acgtggcatgccaggaagacgttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgt 29981894  T
Q  230 acatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcctatattctatt 299  Q
    || ||| ||||||||||||||||||||||||| || || ||||||||||||||||||||||  ||||||||    
T  29981895 acttag-gggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccttaattctatt 29981964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 29931388 - 29931222
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacag-gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||| |||||||  |||| ||||| | ||||||||||||||||||||| |  | |||||| | |||||||||||  |||  ||||||||||||||    
T  29931388 cacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttt 29931289  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctata 292  Q
    ||||  ||| |||| |||||||||||||||||||| || | || |||||||||||||||||||||||    
T  29931288 tgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctata 29931222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 29980542 - 29980376
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacag-gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||| |||||||  |||| ||||| | ||||||||||||||||||||| |  | |||||| | |||||||||||  |||  ||||||||||||||    
T  29980542 cacacgtggaatgccatacaggcgttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttt 29980443  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctata 292  Q
    ||||  ||| |||| |||||||||||||||||||| || | || |||||||||||||||||||||||    
T  29980442 tgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctata 29980376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 54986970 - 54987103
Alignment:
Q  151 attgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgca 250  Q
    |||||| ||||||||||| |||||| || |||| ||||||| ||| ||||||||| ||||| |||||| |||||||| ||||||| || | ||||| |||    
T  54986970 attgaccggtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgca 54987069  T
Q  251 agtttttgaaacttcgaggggaaaagtgcacttta 285  Q
    | |||||||||||| | ||||||||||||||||||    
T  54987070 actttttgaaacttag-ggggaaaagtgcacttta 54987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 55191946 - 55192096
Alignment:
Q  139 tgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagg 238  Q
    |||||||||| |||| || | ||||||||||| |||| || ||||| |||||| | ||||| |||| | |||  ||||||||||||||||||| ||||||    
T  55191946 tgccatgtagacattaaccgatcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagg 55192045  T
Q  239 gccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||||||||||||||||||||||| ||   |||| ||| | |||||||||||    
T  55192046 gccaaaattgcaagtttttgaaagttaaggggggaaaatacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 46720070 - 46719941
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttga 259  Q
    |||||||||||||||||||||||| ||||||| | | ||||||||| |||  |||||||||||||||| ||||||| |||||||||| |||| ||||| |    
T  46720070 tcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaa 46719971  T
Q  260 aactt-cgaggggaaaagtgcactttagcc 288  Q
    || ||  | |||||||| ||||||||||||    
T  46719970 aagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 534629 - 534497
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| ||||| |||||||| |||||||   | |||||||||  |||  |||||||||||||||||||||||  || ||||||||||||||||||    
T  534629 gtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttg 534530  T
Q  259 aaacttcgagggg-aaaagtgcactttagccta 290  Q
    | | || |||||| |||||||||||||||||||    
T  534529 agagttagaggggaaaaagtgcactttagccta 534497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 287
Target Start/End: Complemental strand, 8456639 - 8456479
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||||||||| | |||| ||||| |||||||||||||| ||||||| ||||  |||||    | |||||||||  |||  ||||||||||||||    
T  8456639 cacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagtttt 8456540  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagc 287  Q
    ||||  ||| || |||||||||||||||||||||| || | ||| ||||||||||||||||    
T  8456539 tgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 6171183 - 6171324
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||| ||||| |||||||||||   |||||||||| |||||||||||||| ||||||| |  |||||||||| ||||| |||||| ||||||||    
T  6171183 cacatgtggcgtgccaagtaggcattgattagtcaaaattggccaaaaggaccaaagatgcaaatg-tttaaatcttagagggtcaaaattatagttttt 6171281  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagggg 271  Q
    |||||||| ||||||||||  ||| ||||| |||||| ||||||    
T  6171282 gtacatag-gggccaaaatcacaattttttaaaacttagagggg 6171324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 7268767 - 7268930
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| ||| |||||||| |||||||||||| ||||||||  |||| |||||  |   |||||||||   ||  ||||||||||||| |    
T  7268767 cacacgtggcgtgccacgtaagcattgaccggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaaaattgtagtttct 7268866  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctat 291  Q
     ||| |||  |||||||||||||||||||||||| || | |||||||||||||||||| |||||    
T  7268867 atacttaggaggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttaacctat 7268930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 47614347 - 47614185
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||| |||||||| |||||| |||||||   | |||||||||  |||  |||||||| |||||    
T  47614347 cacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgtttt 47614248  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcc 288  Q
      ||| ||| ||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  47614247 gatacttagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 54539916 - 54539754
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| ||| || |||||  |||||||||| | ||||||| ||||  |||||| ||| |||||||||  || | |||||||||||||||    
T  54539916 cacacgtggcatgccacgtatgctttgaccagtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagttttt 54539817  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||  ||| |||  |||||||||||||||||||| ||  | | ||||||||||||||||||||    
T  54539816 gtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 31645110 - 31645001
Alignment:
Q  152 ttgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaa 251  Q
    ||||| |||||||||||  ||||||||||||| ||||||| | | |||||||||   |||||||||||||||||||| || ||| |||||||||||| ||    
T  31645110 ttgaccggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaa 31645011  T
Q  252 gtttttgaaa 261  Q
    ||||||||||    
T  31645010 gtttttgaaa 31645001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 293
Target Start/End: Complemental strand, 51470104 - 51469967
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||||||||||||  |||||  | | |||||||||  ||| | ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  51470104 aggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttt 51470005  T
Q  257 tgaaacttcgag-gggaaaagtgcactttagcctatat 293  Q
    ||||| || | | |||||||||||||||||||| ||||    
T  51470004 tgaaaattagggagggaaaagtgcactttagccaatat 51469967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 46721190 - 46721322
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||||||| |||||||||| ||||||| | | |||||||||  ||  |||||||||||||||||||||||| |||  ||||| |||| |||||    
T  46721190 ggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaacttttt 46721289  T
Q  258 gaaacttcgaggg-gaaaagtgcactttagcct 289  Q
     ||| || | ||| |||||||||||||||||||    
T  46721290 aaaagttagggggagaaaagtgcactttagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 294
Target Start/End: Original strand, 47610519 - 47610687
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| |||||    
T  47610519 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtttt 47610618  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcctatatt 294  Q
     |||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||| ||||||||    
T  47610619 ggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaacctatatt 47610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 23770346 - 23770476
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || |||||  ||||||| |||||||||||||| ||| ||||||| | |||||||||||  ||| |||||||||||||||    
T  23770346 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttt 23770445  T
Q  227 tgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||  || ||||||||| || |||||    
T  23770446 tgtacataagggaccaaaattgtaacttttt 23770476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 34019117 - 34019246
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttga 259  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| |||  ||   ||||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  34019117 tcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttga 34019216  T
Q  260 aacttcgaggggaaaagtgcactttagccta 290  Q
    || ||  ||||||||| || |||||| ||||    
T  34019217 aagtt-aaggggaaaaatgtactttacccta 34019246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 12703525 - 12703606
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctatatt 294  Q
    ||||||||||||||||||| ||| ||||||||||| ||| ||||||||| || ||||| |||||||||||||||||| ||||    
T  12703525 aaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgcactttagcctttatt 12703606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 290
Target Start/End: Complemental strand, 23769987 - 23769855
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||| |||  ||||||| | |||| |||||||||||||||| |||||||||   |||||||||| || ||    
T  23769987 ggtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatctt-aggggtcaaaattgtagtttttgcacatagaggattaaaattgcaacttgtt 23769889  T
Q  258 gaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||  | | |||||||||||||| ||||||    
T  23769888 gaaagttaagggtggaaaagtgcacttcagccta 23769855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 291
Target Start/End: Complemental strand, 51347430 - 51347265
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||| || ||||| ||| || ||||| ||||||| ||||| ||||| || ||||  |||||| | |||||||||||  |||| ||||||||  ||||    
T  51347430 cacacgtagcctgccacgtatgcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgtcatttt 51347331  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
    ||| |||||||| |||||||||||| ||||| ||||||  |||||| ||||||||||||| |||||    
T  51347330 tgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcactttaacctat 51347265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 264
Target Start/End: Original strand, 6250522 - 6250652
Alignment:
Q  133 gtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtaca 232  Q
    ||||| |||||||||||||||||   ||||||||||  |||||||| |||| ||||||| | ||||||||||| |||| ||||||| ||| |||||||||    
T  6250522 gtggcgtgccatgtaggcattgattagtcaaaattggtcaaaaggatcaaagatgcaaatg-gttaaatcttagagggctaaaattttaggttttgtaca 6250620  T
Q  233 tagagggccaaaattgcaagtttttgaaactt 264  Q
    ||| || |||||||  ||| ||||| ||||||    
T  6250621 taggggaccaaaatcacaattttttaaaactt 6250652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 11671313 - 11671443
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttga 259  Q
    |||||||||| ||||||||||||| ||| ||| | |||||||| ||  |||| |||  |||||||||| ||  ||| |||| ||||||||||||||||||    
T  11671313 tcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttga 11671412  T
Q  260 aacttcgaggggaaaagtgcactttagccta 290  Q
    || || |  || |||||||||||||||||||    
T  11671413 aagttaggcggaaaaagtgcactttagccta 11671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 51037666 - 51037536
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||   ||||||||||  | |||||| | | ||| |||||  ||| |||||||||||||||||| ||||||||| ||||||||||| |||||    
T  51037666 ggtcaaaattgttaaaaaggaccactactgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaacttttt 51037567  T
Q  258 gaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||| ||   || ||||||||||||||||||    
T  51037566 gaaagttaagggagaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 129 - 289
Target Start/End: Complemental strand, 52839197 - 52839036
Alignment:
Q  129 acacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttg 228  Q
    ||||||||| | |||  ||||| ||||| |||||||||||||||||||||  |||  |||||  | | ||||| ||| |||| ||||||||| ||||| |    
T  52839197 acacgtggcgtaccacataggctttgaccggtcaaaattgaccaaaaggatgaaatttgcaatggggctaaattttagaggggtaaaattgttgttttgg 52839098  T
Q  229 tacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcct 289  Q
    ||| ||||||| ||||||| ||| |||||| || || || |||||||| |||||||||||||    
T  52839097 tacttagagggtcaaaattacaaatttttggaagttagagggggaaaattgcactttagcct 52839036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 8876036 - 8875904
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||||| |||||||||||| |||||||   | |||||||||  |||  ||||||||||||||||||||||  |||| |||||||||  |||||     
T  8876036 gtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgcagctttttc 8875937  T
Q  259 aaactt-cgaggggaaaagtgcactttagccta 290  Q
     |||||  | || ||||||||||||||||||||    
T  8875936 gaacttaaggggtgaaaagtgcactttagccta 8875904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 290
Target Start/End: Complemental strand, 47609828 - 47609695
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  |||||||||||||  |||||  | | |||||||||  ||| | ||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  47609828 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagttttt 47609729  T
Q  258 gaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||  | ||||||||||||| |||||||||    
T  47609728 gaaagttagggggggaaaagtgcattttagccta 47609695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 51470424 - 51470557
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||||||||||||  |||||  ||| |||||||||  ||    ||||||| ||||| |||| ||| ||  | ||||||||||||||    
T  51470424 aggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttt 51470523  T
Q  257 tgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||| || | |||||| ||||||||||||||||    
T  51470524 tgaaagttaggggggaagagtgcactttagccta 51470557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 24516562 - 24516459
Alignment:
Q  187 gcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcacttta 285  Q
    ||||| ||| |||||||||| |||  ||||||||||||||| ||| ||| | ||||||||||||||||||| ||| || | |||| |||||||||||||     
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcactttg 24516463  T
Q  286 gcct 289  Q
    ||||    
T  24516462 gcct 24516459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 47615516 - 47615594
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatctta 205  Q
    |||||||||| ||||| |||||||||||  | ||||||||||||||||||||||||| ||||||| | | |||||||||    
T  47615516 cacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta 47615594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 51038815 - 51038897
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctatatt 294  Q
    ||||||||||||||||| ||||| ||| ||||||||||| ||||| ||| ||  | | |||||||||||||||||||||||||    
T  51038815 aaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctatatt 51038897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 5029708 - 5029785
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||||||| ||||| |||| |||  ||||||||||||||| ||||||||  | | |||||||||||||||||||||||    
T  5029708 aaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccta 5029785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 28262268 - 28262187
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctatatt 294  Q
    |||||||| |||||  ||||| | |||||||||| ||||  |||||||| || | |||||||||||||||||||||||||||    
T  28262268 aaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggaaaagtgcactttagcctatatt 28262187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 49398287 - 49398130
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| |||| ||||| |||||||||||| |||||| ||||   ||||||| ||||  |||||| ||| ||||||||||  ||  ||||||||| |||||    
T  49398287 cacacatggcgtgccacgtaggcattgaccggtcaacattggtaaaaaggatcaaagttgcaaatgagctaaatcttaagaggccaaaattgtaattttt 49398188  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcacttta 285  Q
    || ||||||   |||||||   || ||||| ||||||   ||||||||||||||||||    
T  49398187 gttcatagaacaccaaaataataattttttaaaacttaagggggaaaagtgcacttta 49398130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 52104604 - 52104484
Alignment:
Q  162 aaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    |||||||  ||||| ||||||| ||||||| |||||||||||||   ||  |||||| ||||||||||||||  ||| |||||||| ||| |||||||||    
T  52104604 aaaattggtcaaaatgaccaaagatgcaaatgagttaaatcttaggtggccaaaattatagtttttgtacat--aggaccaaaattacaactttttgaaa 52104507  T
Q  262 cttcgaggggaaaagtgcacttta 285  Q
     || | ||||||||||||| ||||    
T  52104506 gttag-ggggaaaagtgcatttta 52104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 300
Target Start/End: Complemental strand, 5001275 - 5001188
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctatattctatta 300  Q
    ||||||| ||||| |||| ||| |||||||||||||||| ||||||||  | | || |||||||||||||||||||||| || |||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagcctattttttatta 5001188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 47615597 - 47615651
Alignment:
Q  237 gggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||||||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  47615597 gggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 47615651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 27852998 - 27853063
Alignment:
Q  232 atagagggccaaaattgcaagtttttgaaacttcgaggg-gaaaagtgcactttagcctatattct 296  Q
    |||| |||||||||||||||  ||||||||||| ||||| |||||||| | |||||||||||||||    
T  27852998 atagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctatattct 27853063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 53901416 - 53901487
Alignment:
Q  216 attgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||||||||||||||| ||  | | ||||||||||| ||||| |||||| | |||||||||||||||||||||    
T  53901416 attgtagtttttgtacttaaggagtcaaaattgcaacttttttaaacttag-ggggaaaagtgcactttagcc 53901487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 4271601 - 4271502
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||| || ||| ||| ||||||| ||||||||||||| ||||||| ||||  |||||| | | ||||||||||   | ||||||||||||||||    
T  4271601 cacatgtggcgtgtcatatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgctaaaattgtagttttt 4271502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 49220492 - 49220538
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaa 174  Q
    ||||||||||| |||| |||| ||||||| |||||||||||||||||    
T  49220492 cacacgtggcaagccacgtagacattgaccggtcaaaattgaccaaa 49220538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 53614895 - 53614817
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||||||||||||| || ||||||| | ||||||| |||||||||||| ||  | | |||||| ||||||||||||||    
T  53614895 aaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagccta 53614817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Complemental strand, 6249740 - 6249637
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagt-taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttt 255  Q
    ||||||||||||| |||||||| ||||  |||||  |||  |||||||||| ||| |||||||||||||||||||| ||  ||   ||||||||||||||    
T  6249740 aggtcaaaattgatcaaaaggatcaaatttgcaat-gagactaaatcttaa-gggataaaattgtagtttttgtacttaagggattaaaattgcaagttt 6249643  T
Q  256 ttgaaa 261  Q
    ||||||    
T  6249642 ttgaaa 6249637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 40426748 - 40426877
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggcc-aaaattgcaagtttt 256  Q
    |||||||||| ||||||||||||||| |  |||| ||| |||||| ||  |||  ||||||||| |||||||| |||  ||||| ||| |||||| ||||    
T  40426748 ggtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaactttt 40426847  T
Q  257 tgaaactt-cgaggggaaaagtgcacttta 285  Q
    | ||| ||  | ||||||||||||||||||    
T  40426848 ttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 54654256 - 54654365
Alignment:
Q  138 atgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagag 237  Q
    |||||| |||| ||||||| ||||||| ||| | |||||||  ||| ||||||| |   |||||  || |||| |||||||||| ||||||||||||||     
T  54654256 atgccacgtagacattgaccggtcaaagttggctaaaaggattaaagatgcaaatggtctaaattctagagggctaaaattgtaatttttgtacatagaa 54654355  T
Q  238 ggccaaaatt 247  Q
    | ||||||||    
T  54654356 gaccaaaatt 54654365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 535791 - 535883
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcc 288  Q
    |||||||||  |||| |||||| |||||||  ||| ||  || |||||||||||||||||||||| || | || |||||||| ||||||||||    
T  535791 taaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcc 535883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 22775827 - 22775783
Alignment:
Q  237 gggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcac 281  Q
    ||||||||||||||| ||||||||| || | ||||||||||||||    
T  22775827 gggccaaaattgcaactttttgaaagttaggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 145 - 289
Target Start/End: Original strand, 45157166 - 45157310
Alignment:
Q  145 gtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaa 244  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  45157166 gtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaa 45157265  T
Q  245 attgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    |||||||||||||||||||| | |||| |||||||||||||||||    
T  45157266 attgcaagtttttgaaacttagggggggaaagtgcactttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 128 - 285
Target Start/End: Original strand, 39153056 - 39153214
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||| ||||| |||||||||||||||    
T  39153056 cacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagttttt 39153155  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcacttta 285  Q
    |||||||  ||||||||||||||||||||||||||||  | ||| ||||||||||||||    
T  39153156 gtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 128 - 264
Target Start/End: Complemental strand, 39152092 - 39151956
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||| || |||||||||||||||    
T  39152092 cacatgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagttttt 39151993  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt 264  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  39151992 gtacatagggggccaaaattacaagtttttgaaactt 39151956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 45148741 - 45148581
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||||||||| |||||| ||||| ||||||||||| |||||||||||||| ||||||| | |||||||||||  |||  |||||||||||||||    
T  45148741 cacatgtggcatgccacgtaggctttgaccggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt 45148642  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
     ||| ||| ||||||||||||||||||||||||| ||  | ||| |||||||||||||||||    
T  45148641 -tacttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 51685739 - 51685868
Alignment:
Q  162 aaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    ||||||| |||||||||||||| ||||||| | | |||||||||  |||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  51685739 aaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaa 51685838  T
Q  262 cttcga-ggggaaaagtgcactttagccta 290  Q
     || || |||||||||||||||||||||||    
T  51685839 gttagagggggaaaagtgcactttagccta 51685868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 293
Target Start/End: Complemental strand, 14999442 - 14999280
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| |||||||||| |||||||||||| ||||||||||||| ||||||| ||||  |||| | ||| |||||   | ||| | |||||||||||||||    
T  14999442 cacacatggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcagatgagctaaat---agaggatcaaaattgtagttttt 14999346  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctatat 293  Q
    |||| ||| ||| ||||||||||||||||||||| || | |||||||||| |||||||||||||||    
T  14999345 gtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttagcctatat 14999280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 145 - 264
Target Start/End: Complemental strand, 45156193 - 45156074
Alignment:
Q  145 gtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaa 244  Q
    |||| ||||||| |||||||||||||||||| ||||||| || ||||   ||||||||||| |||||||||||||||||||||||||||||| || ||||    
T  45156193 gtagacattgactggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaa 45156094  T
Q  245 attgcaagtttttgaaactt 264  Q
    |||| |||||||||||||||    
T  45156093 attgtaagtttttgaaactt 45156074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 11436204 - 11436041
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||  ||||| |||||  ||||||||||||||||||| |||||| ||||||| | |||||||||||  |||  ||||||||||||||    
T  11436204 cacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagtttt 11436105  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcct 289  Q
    | ||| || | |||||||||||||||||||||||| ||  | ||||||||||||||||||||||    
T  11436104 tatacttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 45149910 - 45150073
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggtt-aaaattgtagtttt 226  Q
    |||||||||||| ||| |||||| ||||| ||||||||||| ||||||||| |||| ||||||| | | |||||||||  |||   |||||||| |||||    
T  45149910 cacacgtggcattccacgtaggctttgaccggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttt 45150009  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||| ||  ||||||||||||||||||||||||| || | |||||||||||||||||| ||||    
T  45150010 tgtacttaaggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttaaccta 45150073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 39699707 - 39699867
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| |||| ||||| |||||||||||| |||||||||||||||||||||  |||  |||||  | | |||||||||  |||  ||||||||||||| |    
T  39699707 cacacatggcgtgccacgtaggcattgaccggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttct 39699806  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||| ||| ||| |||||||||||||| |||||| || | |||||||||||||||||||||    
T  39699807 gtacttagggggtcaaaattgcaagttattgaaagttaggggggaaaagtgcactttagcc 39699867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 290
Target Start/End: Original strand, 43059977 - 43060109
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||| |||| ||||||||||||||||||| ||  ||| ||||||| ||| ||||||    
T  43059977 gtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttg 43060076  T
Q  259 aaacttcga-ggggaaaagtgcactttagccta 290  Q
    ||| || || |||| ||||| ||||||||||||    
T  43060077 aaagttagagggggtaaagtacactttagccta 43060109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 129 - 290
Target Start/End: Original strand, 11437139 - 11437302
Alignment:
Q  129 acacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||  || || |||||  ||||||||||||||||||||| |||| ||| ||||| |||||||||||  |||  |||||||||||||||    
T  11437139 acacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagttttt 11437238  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||  || |||||||||||||||||||||| ||  | ||| |||||||||||||||||||    
T  11437239 gtacttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagccta 11437302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 44404603 - 44404441
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||| ||||||| |||||||   | ||||| |||  |||  |||||| ||||||||    
T  44404603 cacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagttttt 44404504  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||| ||| |||| |||||||| ||||||||||| ||  ||||| ||||||||| ||||||||    
T  44404503 gtacttagggggctaaaattgctagtttttgaaagttatgagggaaaaagtgcattttagcct 44404441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 39222413 - 39222575
Alignment:
Q  129 acacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||| ||||||| |||||| ||||  | |||||||||| |||||| ||||||| ||||||| | |  |||||||| |||| ||| ||||||||||||    
T  39222413 acacgtgtcatgccacgtaggcgttgaataagtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagttttt 39222512  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagggg--aaaagtgcactttagcc 288  Q
     ||| ||| ||||||||||||||||||||||||| ||  |||||  |||||||||||||||||    
T  39222513 atacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 43058915 - 43058784
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||||||||||||| |||| ||| ||| | | ||||||||| |||| |||||||||||||||||||| ||| ||| |||||||||||||||||     
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttc 43058816  T
Q  259 aaacttcgaggggaaaagtgcactttagccta 290  Q
    ||| || | ||| ||||||| |||||| ||||    
T  43058815 aaagttagggggaaaaagtgtactttaaccta 43058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 51684497 - 51684366
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||| |||||||||||||| ||||||| | | |||||||||  |||  ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  51684497 ggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaacttttt 51684398  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcc 288  Q
     ||| ||  | |||||||||||||||||||||    
T  51684397 aaaagttaaggggggaaaagtgcactttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 44411906 - 44412032
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| |||||||||||| ||||||||||| | ||||||| ||||  |||||| |   |||||||||||||| ||||||||||||||||    
T  44411906 cacacgtggcgtgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagttttt 44412005  T
Q  228 gtacatagagggccaaaattgcaagtt 254  Q
    |||| ||| || | |||||||||||||    
T  44412006 gtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 134 - 285
Target Start/End: Original strand, 24426020 - 24426173
Alignment:
Q  134 tggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtaca 232  Q
    |||||||||||| | || ||||| |||||||||||||||||||| | ||||  |||||  | | |||||||||  ||  ||||||||||||||||||||     
T  24426020 tggcatgccatgcaagcgttgactaggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtact 24426119  T
Q  233 tagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcacttta 285  Q
    ||| ||||||||||||||||||||||||| || || |||| |||||||||||||    
T  24426120 tagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 31610615 - 31610680
Alignment:
Q  405 gggttaatattaagcatttgaggtttcaatttaaatttttatcactttataaaattataaactgtc 470  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31610615 gggttaatattaagaatttcaggtttcaatttaaatttttatcactttataaaattataaactgtc 31610680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 24422962 - 24422798
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||   |||| ||||| | |||||||||||||||||||| ||||  |||||  | | |||||||||  |||  ||||||||||||||    
T  24422962 cacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttt 24422863  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||| ||| ||| ||||||||||||||||||||| ||  | ||| |||||||||||||||||||    
T  24422862 tgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagccta 24422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 50680461 - 50680329
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||||||||||||| |||| ||||||| | |||||||||||  ||  ||||||| |||||||| ||| ||| ||||||||||||||||||||||    
T  50680461 gtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagtttttg 50680362  T
Q  259 aaacttcgaggggaaaagtgcactttagcctat 291  Q
     || ||   |||||||| ||||||||| |||||    
T  50680361 gaagttaagggggaaaaatgcactttaacctat 50680329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 35066973 - 35067106
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||||||| |  | |||||| | | ||||| |||  |||  ||||||||||||||||| ||||| |||||||||| |||| ||||||    
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttg 35067072  T
Q  259 aaactt-cgaggggaaaagtgcactttagcctat 291  Q
    ||||||  | ||||||||||||||||||||||||    
T  35067073 aaacttaaggggggaaaagtgcactttagcctat 35067106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 293
Target Start/End: Original strand, 36613843 - 36614010
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||| ||||||||| |||  ||||||   | |||||||||  |||| ||||||||||||||    
T  36613843 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagtttt 36613942  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctatat 293  Q
    ||||| ||| ||||||||||| ||||||||| ||| || | || |||||| |||||||||||| ||||    
T  36613943 tgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagccaatat 36614010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 52275130 - 52274967
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||| |||||||||| | |||| ||||| | |||||||||||||||||||| ||||  |||||    | |||||||||  ||   ||||||||||||||    
T  52275130 cacacttggcatgccacgcaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagtttt 52275031  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcct 289  Q
    ||||| ||| ||| ||||||||||||||||||||| || | |||| ||||||||||||||||||    
T  52275030 tgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 35595131 - 35595296
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattg-tagttt 225  Q
    ||||||||||||||||  |  ||||||||  |||||||||||||||||||||||||| ||||||| | | |||||||| | |||  ||||||| ||||||    
T  35595131 cacacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctt-aggggccaaaattgttagttt 35595229  T
Q  226 ttgtacatagagggccaaaattgc-aagtttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
    || ||||||| ||| ||||||||| |||||||| ||| || || |||||||||| ||||||||||||    
T  35595230 ttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagccta 35595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 162 - 289
Target Start/End: Complemental strand, 36612979 - 36612852
Alignment:
Q  162 aaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    |||||||||||||| ||||||| ||||||| |   |||||||||  |||||||||||||||||||||||| || ||  |||||||||||| |||||||||    
T  36612979 aaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta-agatccaaaattgcaaatttttgaaa 36612881  T
Q  262 ctt-cgaggggaaaagtgcactttagcct 289  Q
     ||  | |||||||| |||||||||||||    
T  36612880 gttaaggggggaaaaatgcactttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 35594377 - 35594216
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || ||||| | |||||||||| | |||||||||||| ||||||| | | ||||| |||  |||| ||||||||||||||    
T  35594377 cacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttag-gggtcaaaattgtagtttt 35594279  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcct 289  Q
      ||| ||| ||| ||||||||||||||||||||| || | || ||||||||||||||||||||    
T  35594278 aatacttag-gggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 33088642 - 33088719
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagcct 289  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||  || ||| |||||||||||||||||||||    
T  33088642 aaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 290
Target Start/End: Original strand, 52276106 - 52276266
Alignment:
Q  132 cgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgta 230  Q
    |||||||||||||| | || ||||| ||||||||||||| |||||||| ||||  |||||  | | |||||||||  ||  |||| || |||||||||||    
T  52276106 cgtggcatgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgta 52276205  T
Q  231 catagagggccaaaattgcaagtttttgaaacttcg-aggggaaaagtgcactttagccta 290  Q
    | ||| ||||||||||| ||| ||||||||| || | ||||| ||||||||||||| ||||    
T  52276206 cttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaaccta 52276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 52827478 - 52827346
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  |||||||||||||  |||||  | | |||||||||  ||| | ||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  52827478 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagttttt 52827379  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||| ||  | ||||||||||||||||||||||    
T  52827378 gaaagttagggggggaaaagtgcactttagcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 30249461 - 30249588
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||| ||||| || |||| || |||| ||| |||||||||| |||| |||||||||||||||||||||| | |  ||||||| ||| ||||||    
T  30249461 gtcaaaattgatcaaaaagatcaaagatacaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaaattacaactttttg 30249560  T
Q  259 aaactt-cgaggggaaaagtgcacttta 285  Q
    ||| || ||  ||||| |||||||||||    
T  30249561 aaagttacggagggaagagtgcacttta 30249588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 157 - 288
Target Start/End: Complemental strand, 41364960 - 41364829
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| ||||| |||||||  |||||  | | |||||||||  |||   ||||||| ||||| |||  ||| ||||||||||||||||||||    
T  41364960 aggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttt 41364861  T
Q  257 tgaaacttcgaggggaaaagtgcactttagcc 288  Q
    ||||| || | || ||||||||||||||||||    
T  41364860 tgaaagttaggggagaaaagtgcactttagcc 41364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 7674602 - 7674525
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctat 291  Q
    ||||||||||||||||||| ||| || |||||||||||||||||| ||| || | ||||||||| ||||||||||||||    
T  7674602 aaaattgtagtttttgtacttag-ggcccaaaattgcaagtttttaaaagttaggggggaaaagggcactttagcctat 7674525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 23980491 - 23980569
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
    |||||| |||||||||||| ||| | ||||||||||||||||||| ||| || || |||||||||||||||||||||||    
T  23980491 aaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagccta 23980569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 30248241 - 30248168
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacat 233  Q
    |||||||||| |||||| || |||| ||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  30248241 gtcaaaattggccaaaatgatcaaagatgcaaaggagttaaatcttagaggg-taaaattgtagtttttgtacat 30248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 52828039 - 52828173
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| ||||| |||| ||| | ||||||||||||||||||    
T  52828039 aggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttt 52828138  T
Q  257 tgaaacttcga-ggggaaaagtgcactttagccta 290  Q
    ||||| || || |||||||||||||||||| ||||    
T  52828139 tgaaaattagagggggaaaagtgcactttaaccta 52828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 7983180 - 7983047
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||  |||  |||||  | | |||||||||  |||  |||||||| |||||  ||||||| |||||||||||||||||| ||    
T  7983180 ggtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgtt 7983081  T
Q  258 gaaacttcgaggggaaaagtgcactttagcctat 291  Q
    |||| ||   || ||||||||||||||| |||||    
T  7983080 gaaagttacgggagaaaagtgcactttaacctat 7983047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 292
Target Start/End: Complemental strand, 25652844 - 25652711
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| |||||| ||||||| ||||||| | | |||||||||  |||  ||| || || ||||||||| ||  ||  ||||||||||||||||||    
T  25652844 gtcaaaattggccaaaatgaccaaagatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgcaagtttttg 25652745  T
Q  259 aaacttcgaggggaaaagtgcactttagcctata 292  Q
    ||| || || || ||| |||||||||||||||||    
T  25652744 aaaattagaaggaaaaggtgcactttagcctata 25652711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 50681632 - 50681705
Alignment:
Q  216 attgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||||||||||| ||  ||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 289
Target Start/End: Original strand, 14999901 - 15000057
Alignment:
Q  134 tggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacat 233  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| ||||  |||||| |   ||||| |||   ||| |  ||||||| |||||||| |    
T  14999901 tggcatgccacgtaggcattgacaggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggtggtcatgattgtagattttgtactt 15000000  T
Q  234 agagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagcct 289  Q
    || ||  ||||||||||||||||| ||| || | | || ||||||| ||||||||||    
T  15000001 aggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcct 15000057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 40384856 - 40384753
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||| |||||||||||||| |||||||   | ||||| |||  || | |||||||||||||||||||||||  | | |||||||||| |||||    
T  40384856 ggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaacttttt 40384757  T
Q  258 gaaa 261  Q
    ||||    
T  40384756 gaaa 40384753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 43378652 - 43378786
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || |||||  ||||||||| |||||||||||  ||| ||||||| | | |||||||||   ||| ||||||||| ||||    
T  43378652 cacacgtggcatgccacatatgcgttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttt 43378751  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    ||||| ||| ||  |||||||| ||||||||||||    
T  43378752 tgtacttaggggatcaaaattgtaagtttttgaaa 43378786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 289
Target Start/End: Complemental strand, 39698712 - 39698562
Alignment:
Q  139 tgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagg 238  Q
    ||||||||||| |||||| |||||||||||||||||||||  |||  |||||    | |||||||| |  ||  |||||| |||||| ||||| ||| ||    
T  39698712 tgccatgtaggtattgaccggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatctt-agtggccaaaattatagtttctgtacttagggg 39698614  T
Q  239 gccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||||||||| |||||||| ||| ||  | |||| |||||||||||||||||    
T  39698613 gccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 46066653 - 46066512
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||| ||||| || || | |||||||   | |||||||||  ||| |||||||||||||||||||||||  |||| ||||| |||| |||||    
T  46066653 ggtcaaaattgatcaaaaagatcagagatgcaaattggctaaatcttag-gggctaaaattgtagtttttgtacataaggggctaaaatcgcaacttttt 46066555  T
Q  258 gaaacttcgaggggaaaagtgcactttagcctatattctattaa 301  Q
    |||| || | | |||||||||||||| |||| | ||| ||||||    
T  46066554 gaaagttag-gaggaaaagtgcacttaagccaaaattgtattaa 46066512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 16290174 - 16290089
Alignment:
Q  209 ggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcga--ggggaaaagtgcactttagcctata 292  Q
    ||||||||||||||||||| ||||||  || |||||||||||| ||||||||  || ||  ||| |||| ||||||||||||||||    
T  16290174 ggttaaaattgtagtttttatacataagggaccaaaattgcaactttttgaacgttagatggggaaaaaatgcactttagcctata 16290089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 31194183 - 31194109
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacat 233  Q
    |||| ||||| | |||||||||||| ||||||||  | ||||||||||||||  |||||| ||||||||||||||    
T  31194183 gtcagaattggcaaaaaggaccaaagatgcaaaaaggctaaatcttaaagggccaaaattttagtttttgtacat 31194109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 7675450 - 7675562
Alignment:
Q  179 ccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtg 278  Q
    ||||| ||||||| | | |||||||||  |||| |||||| || ||||| ||| |||  || ||||||||||||||||||||| ||  ||| | |||||     
T  7675450 ccaaagatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaagta 7675549  T
Q  279 cactttagcctat 291  Q
    |||||||||||||    
T  7675550 cactttagcctat 7675562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 11190478 - 11190383
Alignment:
Q  196 ttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||||||||| ||| | ||||||| |||||||||| |||| |  |||||||||||| ||||| ||| ||  | || ||||||||||||||||||||    
T  11190478 ttaaatcttagaggatcaaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagccta 11190383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 21945758 - 21945707
Alignment:
Q  238 ggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    |||||||||||||| ||||| ||||||  ||||||||||| |||||||||||    
T  21945758 ggccaaaattgcaactttttaaaacttaaaggggaaaagtacactttagcct 21945707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 33088228 - 33088129
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||| ||| | ||| |||||| ||||| ||| ||||||| |||||||||| ||| | ||||| | | |||||||||| ||  ||||||||||||||||    
T  33088228 cacacgcggcgtaccacgtaggctttgaccggttaaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaataaaattgtagttttt 33088129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 37526849 - 37526975
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||| ||||| ||||||| ||||||| | | |||||||| | |||  |||||||| |||| | ||  ||| | ||||||||||||||||||||    
T  37526849 gtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatctt-aggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttg 37526947  T
Q  259 aaactt-cgaggggaaaagtgcacttta 285  Q
    ||| ||  | |||||||||| |||||||    
T  37526948 aaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 2940396 - 2940266
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||| || ||||||| ||||| ||||||   |||||||||||  || | ||||||||  ||||||| ||||||||| ||||||  |||  ||||    
T  2940396 ggtcaaaattaactaaaaggatcaaaattgcaaagaggttaaatcttaggggatcaaaattgttatttttgttcatagagggtcaaaatcacaacatttt 2940297  T
Q  258 gaaacttcgaggggaaaagtgcactttagcc 288  Q
     ||||||   |||||||| | ||||||||||    
T  2940296 aaaacttaagggggaaaaatacactttagcc 2940266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 41366179 - 41366237
Alignment:
Q  237 gggccaaaattgcaagtttttgaaacttcg-aggggaaaagtgcactttagcctatatt 294  Q
    |||| ||||||||| |||||||||| || | ||||||||||||||||||||||| ||||    
T  41366179 gggctaaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcctttatt 41366237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 39221444 - 39221412
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaa 191  Q
    ||||||||||||||||||||||||| |||||||    
T  39221444 gtcaaaattgaccaaaaggaccaaagatgcaaa 39221412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 24333074 - 24332916
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||| ||||| |||||||||||||||    
T  24333074 cacacgtggcatgccacgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagttttt 24332975  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcacttta 285  Q
    |||||||  ||||||||||||||||||||||||||||  | ||| ||||||||||||||    
T  24332974 gtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 19753073 - 19752911
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||||||||||||||||| ||||||  | | |||||| ||  |||  ||||||||||||||    
T  19753073 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttt 19752974  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||||| ||| ||||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  19752973 tgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcct 19752911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 28538837 - 28538674
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||||||||  ||| ||||||| ||||||||||||| ||||||| ||||  |||||| | | |||||||||  ||| ||||||||||||||||    
T  28538837 cacacgtggcatgccacatagacattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagttttt 28538738  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||  ||| ||||||||||||||||||||| || || | |||||||||||||||||||||    
T  28538737 gtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagccta 28538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 2186901 - 2186774
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||| ||||  | |||||||||  || |||||||||||||||||||||||||| | |||||||||||| |||||    
T  2186901 ggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaacttttt 2186802  T
Q  258 gaaacttcgaggggaaaagtgcacttta 285  Q
    ||||||| | ||| |||| |||||||||    
T  2186801 gaaacttagggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 128 - 285
Target Start/End: Original strand, 28539760 - 28539917
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| ||||||||||| | ||||||| ||||  |||||| |   |||||||||  ||   |||||||||||||||    
T  28539760 cacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagttttt 28539859  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcacttta 285  Q
    |||| ||||||| ||||||||||||||||| ||| || | |||||||| |||||||||    
T  28539860 gtacttagagggtcaaaattgcaagtttttaaaagttaggggggaaaaatgcacttta 28539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 25523231 - 25523067
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||| |||| |||||| ||||  |  |||||||||| |||||||| |||| ||||||| | | |||||||||  |||| ||||||||||||||    
T  25523231 cacacgtggcaggccacgtaggcgttgaataaatcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttt 25523132  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||| ||| |||| |||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  25523131 tgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 25523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 40255612 - 40255776
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||| |||| |||||||||||| |||||||||||| ||||| ||  |||| |||||  | |||||||||||  |||  ||||||||||||| |    
T  40255612 cacacgtggcacgccacgtaggcattgaccggtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttagggggccaaaattgtagtttct 40255711  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
    |||  ||| ||| ||||||||||||||||| ||| ||  ||||||||||||||||||||||||||    
T  40255712 gtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcctat 40255776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 36486428 - 36486590
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||  |||||| |   |||||||||  ||   |||||||||||||||    
T  36486428 cacacgtggcatgccacgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagttttt 36486527  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcct 289  Q
    |||| ||| ||| ||||||||||||||||| ||| || | |||| |||||||||||| |||||    
T  36486528 gtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 36486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 18486841 - 18487005
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||||||||||||||||| ||||||| | | |||||||||  |||  |||||||| ||||     
T  18486841 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttc 18486940  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    | ||| ||| ||||||||||||||||||||||||| ||  | |||| ||||||||||||||||||    
T  18486941 tatacttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagccta 18487005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 20214357 - 20214196
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacag-gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| |||||| ||||| ||||| | ||||||||||||  ||||||| |  | |||||| | | ||| |||| | |||  ||||||||||||||    
T  20214357 cacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattcttgaggggccaaaattgtagtttt 20214258  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    ||||||||||| || |||||||||||||||||||| ||   |||||||||||||||||||||    
T  20214257 tgtacatagagtgctaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 22940563 - 22940723
Alignment:
Q  129 acacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||  ||||| |||||  |||||||||||||||||||||  ||| ||| ||| | | ||||| |||  |||| ||||||||| |||||    
T  22940563 acacgtggcatgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttag-gggtcaaaattgtaattttt 22940661  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||| ||| ||||||||||||||||||||||||| ||  | |||||||||||||||||||||    
T  22940662 gtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 294
Target Start/End: Original strand, 42196170 - 42196307
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||| | | |||||||||  ||  ||||| ||||||||||||||||||||||||||| |  ||| |||||    
T  42196170 ggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaacttttt 42196269  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcctatatt 294  Q
     ||| ||  | |||| ||||||||||||||||||||||    
T  42196270 aaaagttaggggggggaaagtgcactttagcctatatt 42196307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 16650154 - 16650050
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||   | ||||||||  |||||||||||||||||||||||||| ||||||| | ||||||||||| ||||| ||||||||||||||    
T  16650154 cacacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttt 16650055  T
Q  227 tgtac 231  Q
    |||||    
T  16650054 tgtac 16650050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 33160227 - 33160390
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||| ||||| |||||||||||| ||||||||||| | |||||||  |||  |||||  | | |||||||||| |||| ||||||||||||| |    
T  33160227 cacatgtggcgtgccacgtaggcattgaccggtcaaaattggctaaaaggattaaagttgcaatgg-gctaaatcttaaggggtcaaaattgtagtttct 33160325  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
     ||| ||| |||| |||||||||||||||||||| ||  | ||||||||||||||||||||||||    
T  33160326 atacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcctat 33160390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 16650827 - 16650958
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttga 259  Q
    |||||||||||||||||||||||| ||||||| | | |||| ||||  ||| |||||||||||||||| ||| ||| ||| ||||||||||||||||| |    
T  16650827 tcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaa 16650926  T
Q  260 aactt-cgaggggaaaagtgcactttagccta 290  Q
    || ||  | | |||||||||||||||||||||    
T  16650927 aagttaagggtggaaaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 289
Target Start/End: Complemental strand, 21835162 - 21835040
Alignment:
Q  167 tgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcg 266  Q
    |||| ||||||| ||||  |||||| | |||||||||||  |||| ||||||||||||||||||||||| ||| ||||||  ||| ||||| |||||| |    
T  21835162 tgactaaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttag 21835063  T
Q  267 aggggaaaagtgcactttagcct 289  Q
    ||||| |||||||||||||||||    
T  21835062 agggggaaagtgcactttagcct 21835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 293
Target Start/End: Complemental strand, 25055574 - 25055407
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacagg-tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  |  ||||||||  | |||||||||| ||||||||||||| ||||||| | | |||||||||  |||  ||||||||||||||    
T  25055574 cacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttt 25055475  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcctatat 293  Q
    | ||||||| ||  ||||||||||||   || ||| || || ||||||||||||||||||||||||||    
T  25055474 tatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagcctatat 25055407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 42195263 - 42195137
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||| | | |||||||||  ||   |||||||||| |||||||||||| |||||||||| |||| |||||    
T  42195263 ggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt 42195164  T
Q  258 gaaacttcgaggggaaaagtgcacttta 285  Q
     ||| ||   ||||||||||||||||||    
T  42195163 -aaagttaagggggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 5778775 - 5778939
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| |||||    
T  5778775 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtttt 5778874  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
     |||| ||| |||| |||||||||||||||||||| || || |||||||||||||||||||||||    
T  5778875 ggtacttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 5778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 294
Target Start/End: Complemental strand, 1015645 - 1015478
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| |||||||| || |||||||||||  |||||||||||   |||||||||||| ||||||| |   ||| |||||  ||||||||||||||| ||||    
T  1015645 cacatgtggcatgtcacgtaggcattgattggtcaaaattggggaaaaggaccaaatatgcaaagggactaattcttagggggttaaaattgtaggtttt 1015546  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctatatt 294  Q
    ||||| || |||||||||||| || ||||| ||| || | || ||||||||||| ||| |||| ||||    
T  1015545 gtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgcatttttgcctttatt 1015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 19754101 - 19754235
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||  ||||||||||||| ||||||  | | |||||| ||  |||  ||||||||||||||||||  ||| ||||||||||||||||||||||    
T  19754101 gtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttg 19754200  T
Q  259 aaacttcgagggg--aaaagtgcactttagcctat 291  Q
    ||| || | ||||  |||| |||||||||||||||    
T  19754201 aaagttaggggggaaaaaaatgcactttagcctat 19754235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 286
Target Start/End: Complemental strand, 36485457 - 36485302
Alignment:
Q  132 cgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtac 231  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||| || ||||  |||||| | |||||||||||  |||  |||||| ||||||||||||    
T  36485457 cgtggcatgccatataggcattgaccggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtac 36485358  T
Q  232 atagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttag 286  Q
     ||   || |||||||| |||||||| ||| || | || |||||| ||||||||||    
T  36485357 ttaagaggtcaaaattgtaagttttttaaagttaggggtggaaaaatgcactttag 36485302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 21834943 - 21835019
Alignment:
Q  212 taaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||||||||||||||||| |||||| || |||| |||||| ||||| ||||||  ||||||||||||||||||||||    
T  21834943 taaaattgtagtttttgttcatagaaggtcaaatttgcaactttttcaaacttataggggaaaagtgcactttagcc 21835019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 25056319 - 25056482
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagt-taaatcttaaagggttaaaattgtagttt 225  Q
    ||||||||||||||||  || || ||||| | |||||||||| | ||||  |||||| ||| ||| |||  |||||||||  |||| |||||||||||||    
T  25056319 cacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaacaaccaaagatgtaaatgaggctaaatcttagggggtcaaaattgtagttt 25056418  T
Q  226 ttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |  ||| ||| ||| ||||||||||||||||||||| ||  ||| |||||||||||||||||||    
T  25056419 taatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 1797237 - 1797398
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||| |||||  ||||||||||| ||||||||||||  ||| | | ||||  |||||| | | |||||||||| ||   |||||||||||||||    
T  1797237 cacatgtggcgtgccacataggcattgaccggtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagttttt 1797336  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||  |||  | ||||||||||||||||||| ||||||  |||| |||| | |||||||||||    
T  1797337 gtttataaggagccaaaattgcaagtttttaaaacttaaagggaaaaaatccactttagcct 1797398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 25524069 - 25524158
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattg 248  Q
    ||||||||||||||||||||| ||| ||||||| | | |||||||||  |||| |||||| |||||||||||| |||  |||||||||||    
T  25524069 gtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 33158188 - 33158097
Alignment:
Q  199 aatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggg-gaaaagtgcactttagcct 289  Q
    |||||||| |||| ||||||||||||||||||| ||| | | ||||||||||||||||||||| || | |||  |||| |||||||||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 18485214 - 18485132
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcctatatt 294  Q
    |||||||| |||||  ||| ||| ||||||||||||||||||||| ||| || |||||| |||||||||||||||||| ||||    
T  18485214 aaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcctttatt 18485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 20216788 - 20216866
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||||||||||||||||| |||| | || |||||||||||||||||||| ||  | |||||||||||||||||| ||||    
T  20216788 aaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaaccta 20216866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 34893739 - 34893693
Alignment:
Q  215 aattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaa 34893693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 1016804 - 1016932
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||| ||||| | |||||||||||| | |||||||||   |||| ||||||  ||||||| ||| ||| |||||  | || |||||||||||||||    
T  1016804 cacacgtgacatgctacgtaggcattgaccgatcaaaattggggaaaatgaccaactatgcaaaggagctaattcttag-gagtcaaaattgtagttttt 1016902  T
Q  228 gtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||| | |||||||| ||| |||||    
T  1016903 gtacatagaagaccaaaattacaatttttt 1016932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 25524152 - 25524232
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt--cgaggggaaaagtgcactttagcctat 291  Q
    ||||||||||||||||||| ||| ||||||||||| ||| ||||| ||| ||   | ||||||||||||||||||||||||    
T  25524152 aaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcctat 25524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 1796130 - 1796054
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcc 288  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||||| || | || |||||| ||||||||||||    
T  1796130 aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 5777974 - 5777899
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||||| ||||| |||| ||| ||| ||||||||||||||||||||| || | |||| ||||||||||||||||||    
T  5777974 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttag-gggggaaagtgcactttagccta 5777899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 5730831 - 5730934
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||||| ||||||  |||||  | |||||||||||  |||   ||||||| ||||| |||| ||| |||||||||||| |||||||    
T  5730831 aggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagtttt 5730930  T
Q  257 tgaa 260  Q
    ||||    
T  5730931 tgaa 5730934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 7311682 - 7311618
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    |||||||||  ||| |||||||||||||||||||| | |  |||||| |||||||||||||||||    
T  7311682 taaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaa 7311618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 5730517 - 5730439
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt--cgaggggaaaagtgcactttagccta 290  Q
    ||||||| ||||| |||| |||   ||||||||||||||||||||||| ||   | |||||||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 5961567 - 5961476
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattg 219  Q
    ||||||||||||| ||||||| ||||||| ||| |||| ||  |||||||| |||| ||||||| | ||||||| |||  ||| ||||||||    
T  5961567 cacacgtggcatgtcatgtagacattgaccggttaaaaatggtcaaaaggatcaaagatgcaaaggggttaaattttagggggctaaaattg 5961476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 5962515 - 5962645
Alignment:
Q  131 acgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgta 230  Q
    |||||||||| ||  ||| | ||||| ||| |||||||  ||||||||||||| ||| |||  || ||||| |||   || ||||||| |||||||||||    
T  5962515 acgtggcatgtcacatagacgttgacgggttaaaattggtcaaaaggaccaaagatgtaaattagctaaatattaggtggctaaaattatagtttttgta 5962614  T
Q  231 catagagggccaaaattgcaagtttttgaaa 261  Q
    | ||| || |||||||| ||| |||||||||    
T  5962615 cttaggggaccaaaattacaaatttttgaaa 5962645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 2188962 - 2189030
Alignment:
Q  220 tagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||||||||||||||| |||| ||||| |||| ||||||||||||  ||| |||||||||| ||||||||    
T  2188962 tagtttttgtacatag-gggctaaaatcgcaactttttgaaacttaagagaggaaaagtgcgctttagcc 2189030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 2685820 - 2685744
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||||||||||||||||| ||| || ||||||||  |||||||||||| || | |||||| |||||| |||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaattag-ggggaatagtgcattttatccta 2685744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 18154569 - 18154491
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagggg--aaaagtgcactttagcctat 291  Q
    ||||||||||||||||||| ||| ||| |||||||| |||||||||||| ||  |||||  |||||| |||||||||||||    
T  18154569 aaaattgtagtttttgtacttag-gggtcaaaattgtaagtttttgaaagtt-aaggggaaaaaagttcactttagcctat 18154491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 38834246 - 38834119
Alignment:
Q  129 acacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttg 228  Q
    |||| ||||||  |||| |||| ||||||  |||||||||| ||||| ||| |  | |||||| ||  |||||||||  | | |||||||||||||||||    
T  38834246 acacatggcatatcatgcaggcgttgacatatcaaaattgaacaaaaagactattattgcaaaggaactaaatcttagggagctaaaattgtagtttttg 38834147  T
Q  229 tacatagagggccaaaattgcaagttttt 257  Q
    |||||| |||| |||||| |||| |||||    
T  38834146 tacata-agggtcaaaatcgcaacttttt 38834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 7e-41; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 802531 - 802692
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| || |||||||  |||| |||||| | |||||||||||| ||||||||||| ||||||| | || |||||||| ||||| |||||||||||||||    
T  802531 cacacatgacatgccacctaggtattgactgctcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagttttt 802630  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||||| || |||||||||||||||||||||||||||| | |||||||||| |||||||||||    
T  802631 gtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacactttagcct 802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 22587894 - 22588055
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||||||||  ||| | ||||| |||| |||||| |||||||||||||| ||||||| | | |||||||||| |||  |||||||||||||||    
T  22587894 cacacgtggcatgccacatagacgttgactggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagttttt 22587993  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||||||| ||||||||||||||||||||||||| ||  |||||||||| |||||||||||||    
T  22587994 gtacatag-gggccaaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagcct 22588055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 128 - 300
Target Start/End: Original strand, 38840433 - 38840606
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||| |||  |||||||||||| |||||||||||| ||||||||  |||| |||||  | | |||||||||  ||| ||||||||||||||||    
T  38840433 cacacgtggcacgccgcgtaggcattgaccggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagttttt 38840532  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctatattctatta 300  Q
    |||| ||| |||| |||||||||||||||||||| ||  | |||||||||||||||||||||||| || |||||    
T  38840533 gtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctattttttatta 38840606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 294
Target Start/End: Complemental strand, 36449939 - 36449772
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| |||||||||| |||||||||||| |||||||||||  |||||||| ||||| |||||| |   ||| ||||   |||  |||||||||||||||    
T  36449939 cacacatggcatgccacgtaggcattgaccggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggcaaaattgtagttttt 36449840  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctatatt 294  Q
    |||| ||| ||||||||||||||||||||||||| ||  | |||||||||||||||||||||||||||    
T  36449839 gtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatatt 36449772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 128 - 264
Target Start/End: Original strand, 810721 - 810857
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| || |||||||  |||| |||||| | |||||||||| | ||||||||||| ||||||| | || |||||||| ||||| |||||||||||||||    
T  810721 cacacatgacatgccacctaggtattgactgctcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagttttt 810820  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt 264  Q
    ||||| || ||||||||||||||||||||||||||||    
T  810821 gtacacagggggccaaaattgcaagtttttgaaactt 810857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 159 - 290
Target Start/End: Original strand, 18905959 - 18906090
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||| ||||| ||||||| ||||||| ||| |||||||||  ||| |||||||||||||||||||| ||| |||| |||||||||||||||||    
T  18905959 gtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttag-gggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttg 18906057  T
Q  259 aaacttcg-aggggaaaagtgcactttagccta 290  Q
    ||| || | ||||||||||||||||||||||||    
T  18906058 aaagttagaaggggaaaagtgcactttagccta 18906090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 128 - 261
Target Start/End: Complemental strand, 22587661 - 22587529
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||   | |||||||||  |||  |||||||||||||||    
T  22587661 cacacgtggcatgccatgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagttttt 22587562  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaa 261  Q
    ||| |||| || ||||||||| || |||||||||    
T  22587561 gta-ataggggaccaaaattggaactttttgaaa 22587529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 13030419 - 13030293
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||  |||  ||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  13030419 gtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttag-gggccaaaattacaagtttttg 13030321  T
Q  259 aaacttcgaggggaaaagtgcactttagc 287  Q
    ||| || | ||||||||||||||||||||    
T  13030320 aaagttag-ggggaaaagtgcactttagc 13030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 132 - 289
Target Start/End: Original strand, 11258754 - 11258913
Alignment:
Q  132 cgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgta 230  Q
    |||||||||||||| | || ||||| |||||||||||||||||||||| ||||  |||||  | | |||||||||  ||  |||||||||||||||||||    
T  11258754 cgtggcatgccatgcaagcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgta 11258853  T
Q  231 catagagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagcct 289  Q
    | ||| ||||||||||||||||||||||||| || ||| ||| ||| |||||||||||||    
T  11258854 cttagggggccaaaattgcaagtttttgaaagttagagaggggaaaatgcactttagcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 41879152 - 41879315
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||| |||| |||||||||||| |||||||||||| ||||| ||  |||| |||||  | | ||||| |||  |||||||||||||||||| |    
T  41879152 cacacgtggcacgccacgtaggcattgactggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggttaaaattgtagtttat 41879251  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||| ||||||||||||||||||||||||| ||  | ||| ||||||| |||||||||||    
T  41879252 gtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagccta 41879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 7899822 - 7899985
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| ||| |||||||| |||||||||||||||||| ||  |||  | |||  | | |||||||||  ||| |||||||||||||| |    
T  7899822 cacacgtggcgtgccacgtatgcattgaccggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttct 7899921  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||| || |||||||||||||||||||||| ||  | |||||||||||||||||||||||    
T  7899922 gtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 7899985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 290
Target Start/End: Original strand, 36450864 - 36451023
Alignment:
Q  131 acgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgta 230  Q
    |||||| |||||| ||||||||||||  |||||||||| ||||||||| ||||| |||||| ||| ||| ||||   |||   |||||||||||| ||||    
T  36450864 acgtggtatgccacgtaggcattgaccagtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgta 36450963  T
Q  231 catagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    | ||| || |||||||||||||||||||||| ||   |||||||||||||||||| ||||    
T  36450964 cttaggggaccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttaaccta 36451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 18299504 - 18299373
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||||||||||||| |||| ||||||||| | |||||| ||  |||  ||||||||||||||| ||| |||  ||||||||||| ||||||||    
T  18299504 ggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagttttt 18299405  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||| || || | |||||||||||||||||||    
T  18299404 gaaagttacgggtggaaaagtgcactttagcc 18299373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 22848353 - 22848190
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||| |||||||||||||  |||||| | | |||||||||  | |  ||||||||||||||    
T  22848353 cacacgtggcttgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagtttt 22848254  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcct 289  Q
    ||||  ||| || |||||||||||||||||||||| || | |||| ||||||||||||||||||    
T  22848253 tgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 7898852 - 7898682
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| ||| |||||||| |||||||||||| ||||||||  |||| |||||  | | |||||||||  |||  ||||||||||||| |    
T  7898852 cacacgtggcatgccacgtaagcattgactggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttct 7898753  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctatattcta 297  Q
     ||| |||  ||| |||||||||||||||||||| ||  | || ||||||||||||||| ||||| |||||    
T  7898752 atacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaacctattttcta 7898682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 11996838 - 11996739
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||| ||| | ||||||||||| ||   |||||||||||||||||||||||| ||| |||||| |||| |||||    
T  11996838 ggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttttgtacatagggggtcaaaatcgcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 291
Target Start/End: Complemental strand, 18797409 - 18797243
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || ||||| | |||||||||| | |||||||||||| ||||||| | | ||||| |||  |||| ||||||||||||||    
T  18797409 cacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagtttt 18797310  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg--ggaaaagtgcactttagcctat 291  Q
      ||| ||  ||| ||||||||||||||||||||| || | ||  ||||||||||||||||||||||    
T  18797309 aatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagcctat 18797243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 38839403 - 38839240
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| |||||| |||| ||| |||||||| |||||||||||||||||| ||  |||| |||||  | | |||||||||  |||  |||||||||||||||    
T  38839403 cacaagtggcacgccacgtaagcattgacgggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggccaaaattgtagttttt 38839304  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||  ||| |||| |||||||||||||||||||| ||  | ||| |||| ||||||||||||||    
T  38839303 gtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagccta 38839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 18300697 - 18300829
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttga 259  Q
    ||||||||| |||||||||||||| ||||||| | | |||||  ||  |||| ||||||||||||||||||| ||| ||| ||||||||||||||| |||    
T  18300697 tcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattatag-gggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatga 18300795  T
Q  260 aacttcgaggggaaaagtgcactttagcctatatt 294  Q
    || || | ||||||||||||| |||||| ||||||    
T  18300796 aagttag-ggggaaaagtgcaatttagcttatatt 18300829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 149 - 288
Target Start/End: Complemental strand, 41878234 - 41878092
Alignment:
Q  149 gcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattg 248  Q
    |||||||| |||||||||||||||||| ||  |||| |||||  | | |||||||||| |||  ||||||||||||| ||||| ||| ||||||||||||    
T  41878234 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattg 41878135  T
Q  249 ca---agtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    ||   ||||||||||| ||   |||| ||||||||||||||||    
T  41878134 caaatagtttttgaaagttaaggggggaaagtgcactttagcc 41878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 24475355 - 24475252
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||  ||  |||  ||||||||||||||| ||| ||| |||| |||||| |||||||||    
T  24475355 ggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagttttt 24475256  T
Q  258 gaaa 261  Q
    ||||    
T  24475255 gaaa 24475252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 290
Target Start/End: Original strand, 23869511 - 23869637
Alignment:
Q  164 aattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaact 263  Q
    |||||| |||||||| |||| ||||||| | | |||||||||  | | |||||||||||||||||||  ||| ||||||||||||||||||||| ||  |    
T  23869511 aattgaacaaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagtttttaaagtt 23869610  T
Q  264 tcgaggggaaaagtgcactttagccta 290  Q
      | | |||||||||||||||||||||    
T  23869611 aagggtggaaaagtgcactttagccta 23869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 13568048 - 13567975
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcg-aggggaaaagtgcacttta 285  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  13568048 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacacttta 13567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 18869133 - 18869251
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaa-gagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattg-caagtttt 256  Q
    ||||||||||| ||||| ||||||| |||||||| | | |||||||||  || | ||||||||||||||||||| |||| ||||||||||| ||| ||||    
T  18869133 gtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaattgccaaatttt 18869232  T
Q  257 tgaaacttcgaggggaaaa 275  Q
    ||||| || |||| |||||    
T  18869233 tgaaagttagaggtgaaaa 18869251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 18904443 - 18904365
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||||||||||||||||| ||  |||||||||||||| |||||||||| ||  | |||||||||||||||||||||||    
T  18904443 aaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagccta 18904365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 290
Target Start/End: Original strand, 11938760 - 11938891
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| | |||| || ||||| |||||||||| ||| |||||  |||  |||||| || ||||||||| |||  | |||||||||||||||||||    
T  11938760 gtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaagtttttg 11938858  T
Q  259 aaacttcgagg-ggaaaagtgcactttagccta 290  Q
    ||| || | || |||||||||||||||||||||    
T  11938859 aaagttaggggtggaaaagtgcactttagccta 11938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 32739699 - 32739651
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  32739699 aaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaa 32739651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 128 - 248
Target Start/End: Complemental strand, 32739812 - 32739693
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||  ||| |||||||| ||||| ||||||||||| ||||| |||||||| ||| ||||    |||||||||| |||  |||||||||||||||    
T  32739812 cacacgtggtgtgcgatgtaggcgttgaccggtcaaaattggccaaatggaccaaagatggaaaatgactaaatcttaaggggccaaaattgtagttttt 32739713  T
Q  228 gtacatagagggccaaaattg 248  Q
    ||| || | ||||||||||||    
T  32739712 gtatat-gggggccaaaattg 32739693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 11257783 - 11257621
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||||||||| | |||| ||||| | ||||||||||| |||||||| ||||  |||||  | | |||||||||   ||  ||||||||||||||    
T  11257783 cacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtttt 11257684  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcct 289  Q
    | ||| ||| ||   |||||||||||||||||||| || |||| | ||||||||||||||||||    
T  11257683 tatacttag-ggtttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcct 11257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 26545491 - 26545594
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||| ||||| ||||||| ||||||| | | ||||||||| ||||| |||||| || ||||||||  ||  ||| ||||||||||| |||||    
T  26545491 ggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaattttt 26545590  T
Q  258 gaaa 261  Q
    ||||    
T  26545591 gaaa 26545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 18869000 - 18868922
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagccta 290  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||||| || | || |||||||| ||||||||||||    
T  18869000 aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagccta 18868922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 1034495 - 1034570
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    ||||||| ||||| |||| ||| |||||||||||||| |||||||||| ||  | |||||||||||||||||||||    
T  1034495 aaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 28618051 - 28617950
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||| ||||||||  |||||| ||||||| | | |||||||||  |||  ||||||| ||||||||||| | | |||||||||||||||| |||||    
T  28618051 gtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagattttg 28617953  T
Q  259 aaa 261  Q
    |||    
T  28617952 aaa 28617950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 26544279 - 26544206
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtac 231  Q
    |||||||||||| ||||||||||||| ||||||| | | |||||||||   || ||||| ||||||||||||||    
T  26544279 ggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggctaaaactgtagtttttgtac 26544206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 21837304 - 21837355
Alignment:
Q  237 gggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||||||||||||||||||||||||| || | ||| ||||||||||||||||||    
T  21837304 gggccaaaattgcaagtttttgaaagttag-gggaaaaagtgcactttagcct 21837355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 24476864 - 24476943
Alignment:
Q  208 gggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||| ||||||||||||||||||| ||| || |||||||| ||||||||| ||| || | ||| ||||||||||| |||||    
T  24476864 gggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt-gggggaaaaagtgcactctagcc 24476943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 21837120 - 21837070
Alignment:
Q  237 gggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    ||||||||||||||||||||||||| || || || |||||||||||||||||    
T  21837120 gggccaaaattgcaagtttttgaaagttaga-ggaaaaagtgcactttagcc 21837070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 1033262 - 1033212
Alignment:
Q  237 gggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagc 287  Q
    ||||||||||||||||||||| ||| || | |||||||||| |||||||||    
T  1033262 gggccaaaattgcaagtttttaaaagttaggggggaaaagtacactttagc 1033212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 5819741 - 5819814
Alignment:
Q  216 attgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    |||||||||||||| ||||  |||||||||| |||| ||||||||||||   |||| ||||||| | |||||||    
T  5819741 attgtagtttttgttcatatggggccaaaatcgcaactttttgaaacttaaggggggaaagtgcgccttagcct 5819814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 1290137 - 1290301
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||  ||||| |||||  |||||||||||||||||||||||||| ||||||| | |||||||||||  ||| |||||||||||||||    
T  1290137 cacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttt 1290236  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||| |||||||||||||||||||| |||||||| ||  | |||||||||||||||||||||||    
T  1290237 tgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagccta 1290301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 31600925 - 31601086
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| ||||||| ||||  |||||| | | |||||||||| |||| |||||||||||||||    
T  31600925 cacacgtggcatgccacataggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagttttt 31601024  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcc 288  Q
    |||| ||| ||| ||||||||||||||||| ||| || |||||| |||||||||||||||||    
T  31601025 gtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc 31601086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 10448200 - 10448363
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||| | | || |||||| ||||  |||||||||||||||    
T  10448200 cacacgtggcatgccacgtaggcattgactggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagttttt 10448299  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagccta 290  Q
    |||||||| |||| ||||| |||| |||||||||||| | || ||  |||||||||||||||||    
T  10448300 gtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagccta 10448363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 10447168 - 10447006
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| |||||||||||| ||| ||||||  |||||||||||||| ||||||| | | |||||||||  ||| ||||||||| ||||||    
T  10447168 cacacgtggcgtgccacgtaggcattgactggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggttttt 10447069  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cga-ggggaaaagtgcactttagcc 288  Q
    |||||||| |||| |||||||||| ||||||||||||  || |||||||||||||||||||||    
T  10447068 gtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 12129785 - 12129626
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||| ||||| ||||||| ||||||| | | |||||||||| |||| ||||||||||||||    
T  12129785 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaattgtagtttt 12129686  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcacttta 285  Q
    ||||| ||  ||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12129685 tgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 31599950 - 31599788
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| |||||||||||| ||||||||||| | ||||||| ||||  |||||| | | |||||||||  ||   |||||||||||||||    
T  31599950 cacacgtggcatgccacgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagttttt 31599851  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcct 289  Q
    |||| ||| ||| ||||||||||||||||| ||| || | |||| |||||||||||| |||||    
T  31599850 gtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 26421631 - 26421724
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||||||||| |||| ||||||||||||||||||| |||  || ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  26421631 taaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagccta 26421724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 19750545 - 19750673
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||| |||||||||||| ||||  |||||  | | |||||||||  ||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  19750545 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19750644  T
Q  258 gaaacttcgaggggaaaagtgcactttag 286  Q
     ||| || | |||||||||||||||||||    
T  19750645 aaaagttaggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 19789261 - 19789133
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||| |||||||||||| ||||  |||||  | | |||||||||  ||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  19789261 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19789162  T
Q  258 gaaacttcgaggggaaaagtgcactttag 286  Q
     ||| || | |||||||||||||||||||    
T  19789161 aaaagttaggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 37728535 - 37728667
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||||| ||||||| |||| |||||||  || ||||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||||    
T  37728535 ggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaacttttt 37728634  T
Q  258 gaaacttcgaggggaaaagtgcactttagccta 290  Q
     ||| || |  || |||| ||||||||| ||||    
T  37728635 aaaagttaggaggaaaaaatgcactttaaccta 37728667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 5526065 - 5526228
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||| |||||  | | |||||||||  |||   ||||||| |||||    
T  5526065 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggtttt 5526164  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
      ||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  5526165 gttacttagggggccaaaattgcaagtttttgaaagttagaggggaaaagtgcactttagccta 5526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 285
Target Start/End: Original strand, 8758789 - 8758935
Alignment:
Q  140 gccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagaggg 239  Q
    |||| |||||||||||  | |||||||||||||||||||  |||| |||||  ||| |||||||||| |||  ||||||||||||| ||||| ||| |||    
T  8758789 gccacgtaggcattgatcgatcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttaggggg 8758888  T
Q  240 ccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcacttta 285  Q
    |||||||||||||||||||||| ||  | ||||||||||||| ||||    
T  8758889 ccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 49308052 - 49308130
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctat 291  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  49308052 aaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctat 49308130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 1834251 - 1834119
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggtt-aaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    |||||||||||||||||||||||||| ||||||| | | |||||||||  |||   ||||||||||||||| ||||||| ||| |||||||| |||||||    
T  1834251 ggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagtttt 1834152  T
Q  257 tgaaacttcga-ggggaaaagtgcactttagcc 288  Q
    | ||| || || |||||||||||||||||||||    
T  1834151 ttaaagttagagggggaaaagtgcactttagcc 1834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 1835041 - 1835205
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || ||||| | |||||||||| | |||||||||||| ||||||| | | |||||||||  |||| ||||||||||||||    
T  1835041 cacacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttt 1835140  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagccta 290  Q
      ||| ||| ||| ||||||||||||||||||||| || | |  |||||||||||||||||||||    
T  1835141 aatacttagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagccta 1835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 25685761 - 25685925
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||  ||||  ||||||| |||||    
T  25685761 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggtttt 25685860  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
     |||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  25685861 ggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 25685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 288
Target Start/End: Original strand, 50909634 - 50909774
Alignment:
Q  150 cattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaa-agggttaaaattgtagtttttgtacatagagggccaaaattg 248  Q
    ||||||| |||||||||||| ||||||||||||| ||||||| | | ||||||||||  |||| ||||||||||||||| ||||||| | | |||||| |    
T  50909634 cattgaccggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcg 50909733  T
Q  249 caagtttttgaaacttcgag-gggaaaagtgcactttagcc 288  Q
    ||| ||||| |||||| | | || |||||||||||||||||    
T  50909734 caactttttaaaacttagggtggaaaaagtgcactttagcc 50909774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 290
Target Start/End: Complemental strand, 1289258 - 1289095
Alignment:
Q  129 acacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||  || || |||||  |||||||||||||||||||||||||| ||||||  | ||||||||||||  || ||||||||||||||||    
T  1289258 acacgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaattgtagttttt 1289159  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
     ||| ||||||  ||||||| ||| | ||||||| ||  | |||||||||| ||||||| ||||    
T  1289158 atacttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcactttaaccta 1289095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 290
Target Start/End: Complemental strand, 8757822 - 8757673
Alignment:
Q  140 gccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagaggg 239  Q
    |||| |||||||||||| | |||||||||||||||||||  |||| |||||  | | |||||||||| ||   ||||||||||||| ||||| ||| |||    
T  8757822 gccacgtaggcattgaccg-tcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttaggggg 8757724  T
Q  240 ccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    | ||||||| |||||||||||| ||   ||| |||||||||||||||||||    
T  8757723 ctaaaattgtaagtttttgaaagttaaggggaaaaagtgcactttagccta 8757673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 21178157 - 21177995
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| |||||  |||||||||||  |||||||||| | |||| || ||||  |||||||| | ||||| |||  |||| |||||||||||||||    
T  21178157 cacacgtggcgtgccacataggcattgaccagtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagttttt 21178058  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    || ||||| ||  ||||||||||| ||| ||||| || | |||| ||||| ||||||||||||    
T  21178057 gttcataggggatcaaaattgcaactttatgaaagttagggggggaaagtacactttagccta 21177995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 290
Target Start/End: Complemental strand, 1963327 - 1963194
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||   ||||||||||  | |||||| | | ||| |||||  ||| ||||||||||||||||||||||||  |||||||||||||| |||||    
T  1963327 ggtcaaaattgctaaaaaggaccactattgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaacttttt 1963228  T
Q  258 gaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||  | |||||||||||||||||||||||    
T  1963227 gaaagttaaggggggaaaagtgcactttagccta 1963194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 17383068 - 17382987
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctatatt 294  Q
    ||||||||||||||||||| ||  || |||||||||||||||||||||| || | || ||||||||||||||||||||||||    
T  17383068 aaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagttaggggagaaaagtgcactttagcctatatt 17382987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 17388150 - 17388315
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| |||||| ||||| ||||| | ||||||||||||| ||||||| |  | || ||| | | ||| ||||   |||  |||||||||||||     
T  17388150 cacacgtggcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagttta 17388249  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctata 292  Q
    ||||| ||  || |||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  17388250 tgtacttaagggaccaaaattgcaagtttttgaaagttaggggggaaaagtgcactttagcctata 17388315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 35934503 - 35934347
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||| |  |||  |||||  | | |||||||||| |||  |||||| || ||| |    
T  35934503 cacacgtgacatgccacgtaggcattgactggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttct 35934404  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcacttta 285  Q
     ||| ||| || |||||||| ||||||||||||| || | ||||||||||||||||||    
T  35934403 ttacttaggggaccaaaattacaagtttttgaaagttag-ggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 25685065 - 25684934
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||| |||||||||||||  |||||  | | |||||||||  |||   ||||||| ||||| |||| ||||||| |||||||||||||||||    
T  25685065 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagttttt 25684966  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||| ||  | |||||||||||||||||||||    
T  25684965 gaaagttagggggggaaaagtgcactttagcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 49306903 - 49306773
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||||  |||||||||||| ||||||||    |||||| ||  |||  ||||||||||||||||||| || | |||||||||||||||||||||    
T  49306903 gtcaaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattgggc-aaaattgtagtttttgtacttaaatggccaaaattgcaagtttttg 49306805  T
Q  259 aaacttcgaggggaaaagtgcactttagccta 290  Q
    ||| || | ||  |||||||||||||||||||    
T  49306804 aaagttgggggaaaaaagtgcactttagccta 49306773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 10471327 - 10471489
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| |||||    
T  10471327 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtttt 10471426  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
     |||| ||| ||||||||||||||||||||||||| ||  | |||||||||||||||||||||    
T  10471427 ggtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 52491549 - 52491712
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||  |||| ||||||||||||  ||||||||||||||||||||  |||  |||||  | | ||||| |||  |||  ||||||||||||| |    
T  52491549 cacacgtggc--gccacgtaggcattgacctgtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttct 52491646  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctata 292  Q
    |||  |||||| |||||||||||||||||||||| ||  | | |||||||| ||||||||||||||    
T  52491647 gtatttagaggaccaaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcctata 52491712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 10470677 - 10470545
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||| |||||||||||||  |||||  | | |||||||||  |||   |||||||  |||| |||| ||||||| |||||||||||||||||    
T  10470677 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagttttt 10470578  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||| ||  | ||||||||||||||||||||||    
T  10470577 gaaagttaaggggggaaaagtgcactttagcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 13509329 - 13509461
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||| ||||||||| ||||  |||||| | | |||||||||  || | ||||||||||||||  ||| | | ||||||||||||||| |||||    
T  13509329 ggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaatttttt 13509428  T
Q  258 gaaacttcgaggggaaaagtgcactttagccta 290  Q
     ||| || | |||||||||| ||||||||||||    
T  13509429 aaaagttaggggggaaaagtacactttagccta 13509461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 13386178 - 13386012
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggtta-aaattgtagttt 225  Q
    |||| |||||||||||| |  || ||||| ||||||||||||| |||||||||||||  |||||    | |||||||||  |||  | ||||||| ||||    
T  13386178 cacatgtggcatgccatatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttt 13386079  T
Q  226 ttgtacatagagggccaaaattgcaagt-ttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
    | |||| ||| ||||||||||||||||| |||||||| || || |||||||||||||||||||||||    
T  13386078 tggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 55602452 - 55602379
Alignment:
Q  212 taaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcacttta 285  Q
    |||||||||||||||| || ||||||| | |||||||||||||||||||| ||  ||||||||| |||||||||    
T  55602452 taaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaaaggggaaaaatgcacttta 55602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 27257969 - 27258029
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||| |||||||||||| |||||||||| |||||||| ||||||||||| |||||    
T  27257969 taaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaacttttt 27258029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 5525490 - 5525359
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  5525490 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagttttt 5525391  T
Q  258 gaaacttcgaggggaaaagtgcactttagcct 289  Q
    |||| || | |||||||| || ||||||||||    
T  5525390 gaaagttaggggggaaaaatgtactttagcct 5525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 8155867 - 8155741
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagg-gccaaaattgcaagttttt 257  Q
    |||||| |||||||||| ||| ||| |||||||   | |||||||||  |||  |||||||||||||||| || ||| || || ||||||||||||||||    
T  8155867 gtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagttttt 8155768  T
Q  258 gaaacttcgaggggaaaagtgcacttta 285  Q
    |||| || | ||||||||||||||||||    
T  8155767 gaaagttag-ggggaaaagtgcacttta 8155741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 54108020 - 54107957
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaa 191  Q
    |||||||||| |||||||||||||||||| ||| ||||||| |||||| ||||||| |||||||    
T  54108020 cacacgtggcgtgccatgtaggcattgactggttaaaattggccaaaaagaccaaagatgcaaa 54107957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 285
Target Start/End: Original strand, 35935474 - 35935631
Alignment:
Q  129 acacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttg 228  Q
    ||||||||| |||||  ||||||||||| ||||||||||| |||||||||  |||  |||||    | |||||||||  |||  ||||||||||||| ||    
T  35935474 acacgtggcgtgccacataggcattgaccggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatg 35935573  T
Q  229 tacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcacttta 285  Q
    ||| ||| |||| |||||||||| ||||| ||| ||  | |||| |||||||||||||    
T  35935574 tacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 46637844 - 46637680
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattg--accaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttt 225  Q
    |||| ||||||||||| |||||||||||| |||||||||||  |  |||| ||||||| |||||||    |||| | |||| ||   |||||||||||||    
T  46637844 cacatgtggcatgccacgtaggcattgaccggtcaaaattggaaaaaaaatgaccaaatatgcaaattgattaattattaagggaccaaaattgtagttt 46637745  T
Q  226 ttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||||||||| | || |||||  ||||||||| ||| ||||  |||   ||||||||||||||||    
T  46637744 ttgtacatagggagctaaaatcacaagtttttaaaagttcggaggggggagtgcactttagccta 46637680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 37727827 - 37727729
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagt-taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||| ||||||| || |||| |||  |||||||||| ||||||||||||||||||||||| ||| || ||||||||| ||| ||||    
T  37727827 ggtcaaaattgactaaaatgaccaaagatacaaa-gagactaaatcttaaggggttaaaattgtagtttttgtatata-agagccaaaattacaactttt 37727730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 289
Target Start/End: Complemental strand, 3927796 - 3927665
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| ||||||||||  |||||||||| | | |||| | || |||   ||||||||||||||  ||||| | |||||||||| ||||  ||||     
T  3927796 gtcaaaattgcccaaaaggactgaaaatgcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacatttta 3927697  T
Q  259 aaacttcgagggg-aaaagtgcactttagcct 289  Q
    ||| || |||||| ||||||||||||||||||    
T  3927696 aaagttagagggggaaaagtgcactttagcct 3927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 3928829 - 3928960
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| | ||||||||  |||||||||| | | |||| | || ||||  |||||||| |||||  ||||||| |||||||||| ||||  |||||    
T  3928829 gtcaaaattgcctaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttg 3928928  T
Q  259 aaacttcgagggg-aaaagtgcactttagcct 289  Q
    ||| || | |||| ||||||||||||||||||    
T  3928929 aaagttagggggggaaaagtgcactttagcct 3928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 14868964 - 14868889
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||||||| |||||  ||| ||| |||||||||||||||| ||||||||  | | ||||||||||||||||||||||    
T  14868964 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 14876970 - 14877045
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcct 289  Q
    ||||||| |||||  ||| ||| |||||||||||||||| ||||||||  | | ||||||||||||||||||||||    
T  14876970 aaattgtggttttgatacttagcgggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcct 14877045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 50909388 - 50909270
Alignment:
Q  172 aaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagggg 271  Q
    |||||||||||| ||||||| || | ||||||||   ||||||||||||||||||| || ||||  || ||||||||||| ||||| |||||| | ||      
T  50909388 aaaaggaccaaagatgcaaatgact-aaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttaggggaa 50909290  T
Q  272 aaaagtgcactttagcctat 291  Q
    |||| | |||||||||||||    
T  50909289 aaaaatacactttagcctat 50909270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 48780323 - 48780246
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||||| ||||| |||| ||| ||| ||||||||||||||||| ||| ||  | |||||||||||||||||||||||    
T  48780323 aaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagccta 48780246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 1964466 - 1964542
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    ||||||||||||||||| ||||| |||||||||||| || ||||| ||| ||  | | |||||||||||||||||||    
T  1964466 aaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 21539068 - 21539140
Alignment:
Q  185 atgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||| ||| |||||||||  |||| |||||||||||||||  || |||  ||||||||||||||||||||    
T  21539068 atgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagttttt 21539140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 48781072 - 48781147
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagggg-aaaagtgcactttagcct 289  Q
    ||||||| ||||| |||| ||| || |||||||||||| ||||||||| || |||||| ||||||||||||||||||    
T  48781072 aaattgtggttttagtacttag-ggaccaaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcct 48781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 13386558 - 13386635
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagggg--aaaagtgcactttagcct 289  Q
    ||||||| ||||| |||| ||  ||| ||||||||||||||||||||| || | ||||  ||||||||||||||||||    
T  13386558 aaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcct 13386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 55603556 - 55603633
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||| |||||||||||||| || ||   |||||||||||||||||||| ||   ||| |||||||||||||| ||||    
T  55603556 aaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaaggggaaaaagtgcactttaaccta 55603633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 7501791 - 7501955
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||||||||  | ||||||||||||||||||||||||| ||||||| | | || ||||||| |||  |||||||| |||||    
T  7501791 cacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgtttt 7501890  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
      ||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  7501891 gatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 7501955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 18371585 - 18371424
Alignment:
Q  129 acacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||| ||||| |||||| ||||  | |||||||||||||||||||| |||| ||||||| | | |||||||||  |||  |||||||||||||||    
T  18371585 acacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagttttt 18371486  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||| ||  ||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  18371485 gtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 42886226 - 42886389
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||||||||  ||| ||||||  |||||||||||||||||| || |||| ||||||| | | |||||||||  ||| ||||||||||||||||    
T  42886226 cacacgtggcatgccacatagacattgatcggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagttttt 42886325  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||  ||| ||| ||||||||||| ||||||||| ||  |||| ||||||||||||||| ||||    
T  42886326 gtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcactttaaccta 42886389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 21505542 - 21505413
Alignment:
Q  161 caaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaa 260  Q
    |||||||| |||||||||||||| ||||||| | | |||||||||  |||| |||||||||||||||||| || | |||||||||| |||| ||||||||    
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaa 21505443  T
Q  261 acttcgaggggaaaagtgcactttagcctat 291  Q
    | || | ||||||||||||||||||||||||    
T  21505442 agttag-ggggaaaagtgcactttagcctat 21505413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 18372428 - 18372544
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||||||||||| || |||| | | |||||||||  |||  ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  18372428 gtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttg 18372527  T
Q  259 aaacttcgaggggaaaa 275  Q
    ||| || | ||||||||    
T  18372528 aaaattaggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 128 - 261
Target Start/End: Complemental strand, 22629648 - 22629514
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||| |||| |||||| ||||  | ||||||||||||||||||||||||| ||||||| | | |||||||||  |||  ||||||||||||||    
T  22629648 cacacgtggcaggccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttt 22629549  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    ||||| |||  |||||||||| |||||||||||||    
T  22629548 tgtacttaggaggccaaaattacaagtttttgaaa 22629514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 134 - 283
Target Start/End: Original strand, 14999101 - 14999249
Alignment:
Q  134 tggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacat 233  Q
    |||||||||| ||| |||||||| |||||||||||||| |||||| |||| ||||||| | | |||||||||  | |  ||||||||||||||||||  |    
T  14999101 tggcatgccacgtaagcattgaccggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtattt 14999200  T
Q  234 agagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactt 283  Q
    || ||| |||||||||||| |||||||| || | ||||||||||||||||    
T  14999201 agggggtcaaaattgcaag-ttttgaaaattaggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 128 - 291
Target Start/End: Complemental strand, 46482759 - 46482594
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||| |||| ||||| |||||||||||  | ||||||||||||||||||||  ||||||||||| ||| |||||||||  || |||||||| |||||||    
T  46482759 cacacatggcttgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagtttt 46482660  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
    ||||||||| ||| |||| || ||| ||||||||| ||  |||| ||||| |||||||||| ||||    
T  46482659 tgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcactttagtctat 46482594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 290
Target Start/End: Original strand, 22630423 - 22630555
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||||||||||| || ||||   | | |||||||  ||| |||||||||||||||||||  ||| ||||||||||||||||||||||    
T  22630423 gtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttg 22630522  T
Q  259 aaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||| ||  |  ||||||||||||||||||||||    
T  22630523 aaagttatggagggaaaagtgcactttagccta 22630555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 289
Target Start/End: Complemental strand, 7500584 - 7500454
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||||||||||||| |||| ||||||| | | |||||||||  |||  |||||||| |||| | ||| ||||||  ||||||||||||||||||    
T  7500584 gtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttg 7500485  T
Q  259 aaacttcgaggggaaaagtgcactttagcct 289  Q
    ||| ||   ||||||||||||||||||||||    
T  7500484 aaagttaagggggaaaagtgcactttagcct 7500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 31659785 - 31659622
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||||||||| | | || ||||| | |||||||||||||||||||| ||||  |||||  | | |||||||||  |||  ||||||||||||||    
T  31659785 cacacgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttt 31659686  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagggg--aaaagtgcactttagcc 288  Q
    ||||| ||| ||| |||||||| |||||||||||| || | ||||  |||||||||||||||||    
T  31659685 tgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagcc 31659622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 287
Target Start/End: Complemental strand, 3227239 - 3227109
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||  |||||||||||||  |||||  | | |||||||||| |||   ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  3227239 aggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttt 3227140  T
Q  257 tgaaacttcgaggggaaaagtgcactttagc 287  Q
    ||||| || | |||| |||||||||||||||    
T  3227139 tgaaaattagggggggaaagtgcactttagc 3227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 290
Target Start/End: Complemental strand, 31949454 - 31949320
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||||||||||||  |||||  | | |||||||||  |||   ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  31949454 aggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttt 31949355  T
Q  257 tgaaacttcgag-gggaaaagtgcactttagccta 290  Q
    ||||| || | | ||||||||||||||||||||||    
T  31949354 tgaaaattagggagggaaaagtgcactttagccta 31949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 290
Target Start/End: Complemental strand, 127467 - 127335
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||  |||||||||||||  |||||  | | |||||||||  ||| |||| |||| ||||| |||| ||| || |||||||||||||||||    
T  127467 aggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagtttt 127369  T
Q  257 tgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||| || | |||||||||||||||||||||||    
T  127368 tgaaagttaggggggaaaagtgcactttagccta 127335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 17782579 - 17782658
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcctata 292  Q
    ||||||| ||||| |||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||||    
T  17782579 aaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctata 17782658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 290
Target Start/End: Original strand, 3227563 - 3227697
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||||||||||||  |||||  | | |||||||||  ||    ||||||| ||||| |||| ||| ||||||||||||||||||||    
T  3227563 aggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttt 3227662  T
Q  257 tgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||||| ||  | |||||||||||||||||||||||    
T  3227663 tgaaagttagggggggaaaagtgcactttagccta 3227697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 11658455 - 11658373
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctatatt 294  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||| ||  | ||||||||||||| |||||||||||||    
T  11658455 aaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagcctatatt 11658373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 34352726 - 34352888
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| || || |||||||||||| ||||||||||| |||||| ||  |||  ||||| |  ||||||||||| ||||  |||||| |||||| |    
T  34352726 cacacgtggcgtgtcacgtaggcattgaccggtcaaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggccaaaattatagtttat 34352825  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcct 289  Q
    |||| ||  || ||||||| | |||||||||||| || |||| | ||||||||||||||||||    
T  34352826 gtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagcct 34352888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 47525306 - 47525468
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| |||||    
T  47525306 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtttt 47525405  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcc 288  Q
      ||| ||| |||| |||||||||||||||||||| || || |||||||||||||||||||||    
T  47525406 gatacttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 14998140 - 14998064
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatctta 205  Q
    |||||||||||||| |||||||||||||| | | |||||||||||||||||||||| ||||||| | | |||||||||    
T  14998140 cacacgtggcatgc-atgtaggcattgaccgattaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta 14998064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 17781792 - 17781663
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  |||||||||||||  |||||  | | |||||||||  ||| | ||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  17781792 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagttttt 17781693  T
Q  258 gaaactt-cgaggggaaaagtgcactttag 286  Q
    |||| ||  | |||||||||||||||||||    
T  17781692 gaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 20163585 - 20163658
Alignment:
Q  217 ttgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcct 289  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| || | || ||| ||||||||||||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 34351584 - 34351520
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    |||||||||| |||||||||||||||||| | ||| | ||| |||||||||||||||||||||||    
T  34351584 taaatcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttgaaa 34351520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 289
Target Start/End: Original strand, 31660953 - 31661111
Alignment:
Q  132 cgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgta 230  Q
    |||||||||||||| | || ||||| |||||||||||  ||||||||| ||||  |||||    ||||||| |||  ||  ||||||| |||||||||||    
T  31660953 cgtggcatgccatgcaagcgttgactaggtcaaaattc-ccaaaaggatcaaatttgcaatgaggttaaattttaggggactaaaattatagtttttgta 31661051  T
Q  231 catagagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagcct 289  Q
    | || |||| ||||||||||| ||||||||| || ||| ||| |||||||||||||||||    
T  31661052 cgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcct 31661111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 31949771 - 31949906
Alignment:
Q  157 aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||||| |||||||||||||  |||||  | | |||||||||  ||    ||||||| ||||| |||  ||| ||||||||||||||||||||    
T  31949771 aggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttt 31949870  T
Q  257 tgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
    ||||| ||  | |||||| |||||||||||||||||    
T  31949871 tgaaagttagggggggaagagtgcactttagcctat 31949906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 34174010 - 34174085
Alignment:
Q  215 aattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||||| ||||| |||| ||| |||||||||||||||| ||||||||  | | |||||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagccta 34174085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 47369911 - 47369809
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||||||||||  || ||| ||||||| | | |||||||||| |||  |||||| |||||||||||| ||   ||| |||||||||||||||||    
T  47369911 gtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttg 47369812  T
Q  259 aaa 261  Q
    |||    
T  47369811 aaa 47369809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 11662576 - 11662649
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcacttta 285  Q
    |||||| |||||||||||||||||| || |||||||||||||||||||| ||  | |||||||| |||||||||    
T  11662576 aaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcacttta 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 48934928 - 48935004
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcc 288  Q
    |||||| |||||||||||| ||||||| ||||||| ||||||||||||| || | || |||||| ||||||||||||    
T  48934928 aaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  215 aattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcac 281  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||||||| || || ||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 48933759 - 48933664
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctata 292  Q
    |||||||||| || | |||||||||||||||||  |||  ||  ||||||||||||||||| ||| ||  | ||||||||| || |||||||||||    
T  48933759 taaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattgcaagtttttaaaatttaaaagggaaaagtacattttagcctata 48933664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 21508449 - 21508505
Alignment:
Q  233 tagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||||||||||||||| || ||||||||| ||  ||||||||| ||||||||||||||    
T  21508449 tagagggccaaaattgaaactttttgaaagtt-aaggggaaaaatgcactttagccta 21508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 32253373 - 32253430
Alignment:
Q  134 tggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaa 191  Q
    |||| ||||| |||| ||||||| ||||||||||  |||||||||||||| |||||||    
T  32253373 tggcgtgccacgtagacattgaccggtcaaaatttgccaaaaggaccaaagatgcaaa 32253430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 597303 - 597383
Alignment:
Q  207 agggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||| ||||||||||||||||||| ||  | | ||||||| ||||||||||||| ||  ||||||||| ||||| ||||||||    
T  597303 agggtcaaaattgtagtttttgtactta-tgcgtcaaaatttcaagtttttgaaagtt--aggggaaaaatgcacattagccta 597383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 34351649 - 34351609
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattg 168  Q
    |||||||||| ||||| |||||||||||| |||||||||||    
T  34351649 cacacgtggcgtgccacgtaggcattgaccggtcaaaattg 34351609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 290
Target Start/End: Complemental strand, 24123032 - 24122881
Alignment:
Q  139 tgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagg 238  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| |||||||  || |||||||||  ||  ||||||| |||||||||||| ||| ||    
T  24123032 tgccacgtaggcattgaccggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggg 24122933  T
Q  239 gccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    | ||||||||||| ||||| ||| || | |||||||| ||||||||||||||    
T  24122932 gtcaaaattgcaaattttttaaagttaggggggaaaaatgcactttagccta 24122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 18971057 - 18970920
Alignment:
Q  142 catgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggcc 241  Q
    ||||||||||||||| ||||||||||| | ||||||||||||  |||||| | |||||||||| | |||| ||||||||||||||||||| ||| |||||    
T  18971057 catgtaggcattgaccggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggcc 18970958  T
Q  242 aaaattgcaagtttttgaaacttcgaggggaaaagtgc 279  Q
    ||||||| ||| |||||||| || | ||||||||||||    
T  18970957 aaaattgaaagattttgaaagttaggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 158 - 288
Target Start/End: Original strand, 30336471 - 30336602
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||||  | ||||||||| ||||||||||||||||||||||||| |||  ||| ||||||  ||||||||    
T  30336471 ggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagttttt 30336570  T
Q  258 gaaacttcgaggggaa-aagtgcactttagcc 288  Q
    |||| || | |||||| |||||||||||||||    
T  30336571 gaaagttaggggggaagaagtgcactttagcc 30336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 5514111 - 5513977
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||| ||||||||||||| ||||||| | | ||||| |||  |||  ||||||||||||||||||| ||| |||||||||||| |||||||||    
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttg 5514012  T
Q  259 aaacttcgaggggaaaagtgcactttagcctatat 293  Q
    ||| || | ||| ||||||||||||||||||||||    
T  5514011 aaagttagggggtaaaagtgcactttagcctatat 5513977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 10006506 - 10006344
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||||||||||||||||| ||||||| | | |||||||||  |||  |||||||| |||||    
T  10006506 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgtttt 10006407  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcc 288  Q
      ||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  10006406 gatacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 294
Target Start/End: Original strand, 12353301 - 12353466
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||||| |  |||| |||||  | | |||||||||  |||  |||||| |||||||     
T  12353301 cacacgtggcacgccatgtaagcattgaccggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatagtttt- 12353399  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctatatt 294  Q
    |||| ||| ||||||||||||||||||||||||| ||   |||||||||||||||||||||| ||||    
T  12353400 gtacttagggggccaaaattgcaagtttttgaaagttaagggggaaaagtgcactttagcctttatt 12353466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 285
Target Start/End: Original strand, 30570196 - 30570353
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| |||| ||||||| ||||||||||| |||||||||||||| ||||||||| | |||||||||  |||  |||||| || |||||    
T  30570196 cacacgtggcgtgccacgtagacattgactggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaattttt 30570295  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaa-gtgcacttta 285  Q
    ||||||| |||  ||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  30570296 gtacata-aggatcaaaattgcaactttttaaaacttagaggggaaaaggtgcacttta 30570353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 8389659 - 8389792
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  ||||||||||||||||| ||| | |||||||||||  ||  |||||||||||||||||||||||  || |||||||||||| |||||    
T  8389659 ggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaacttttt 8389758  T
Q  258 gaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||||||  |||||||||||||||||||| ||||    
T  8389759 gaaacttaagaggggaaaagtgcactttaaccta 8389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 1824049 - 1824174
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||||||||||| ||||||||  | |||||||||  |||  ||||||||||||||||||| ||| || |||||||||||||||||||    
T  1824049 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttg 1824148  T
Q  259 aaacttcga-ggggaaaagtgcactt 283  Q
    ||| || || |||||||| |||||||    
T  1824149 aaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 1858494 - 1858619
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||||||||||| ||||||||  | |||||||||  |||  ||||||||||||||||||| ||| || |||||||||||||||||||    
T  1858494 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttg 1858593  T
Q  259 aaacttcga-ggggaaaagtgcactt 283  Q
    ||| || || |||||||| |||||||    
T  1858594 aaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 290
Target Start/End: Complemental strand, 30569046 - 30568885
Alignment:
Q  129 acacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttg 228  Q
    ||||||||| ||||| |||| ||||||| ||||| ||||| |||||||||||||| ||||||| | | |||||||||  || | |||||| |||||||||    
T  30569046 acacgtggcgtgccacgtagacattgactggtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttg 30568947  T
Q  229 tacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||| ||   |  |||||||| || |||||||||||| |||||| ||||||||||||||||||    
T  30568946 tacctaagagatcaaaattgtaactttttgaaacttagagggggaaagtgcactttagccta 30568885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 10007702 - 10007868
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | |||||||||||| |||||||||||| ||||||| | | |||||||||  ||   |||||||| ||||     
T  10007702 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttc 10007801  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctata 292  Q
    | ||| ||| ||||||||||||||||||||||||| ||  | |||||||||||||||||||||||||    
T  10007802 tatacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctata 10007868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 129 - 279
Target Start/End: Complemental strand, 18978179 - 18978029
Alignment:
Q  129 acacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttg 228  Q
    ||||||||| ||||| ||||||||||||  ||||||||||   ||||||| ||||  |||||| | | |||||||||| |||  ||||||||||||||||    
T  18978179 acacgtggcgtgccacgtaggcattgacccgtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttg 18978080  T
Q  229 tacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgc 279  Q
    ||| ||| |||||||||||| ||| |||||||| || | ||||||||||||    
T  18978079 tacttagggggccaaaattgaaagattttgaaagttaggggggaaaagtgc 18978029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 22220550 - 22220388
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacagg-tcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  |  ||||||||  | |||||||||| ||||||||||||| ||||||| | | |||||||||  |||  ||||||||||||||    
T  22220550 cacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttt 22220451  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcc 288  Q
    | ||||||| ||| ||||||||||||| ||| ||| || || |||||||||||||||||||||    
T  22220450 tatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagcc 22220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 30335770 - 30335638
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||| ||||||||||||| ||||||| | | |||||||||  |||||||||||||| ||||||||| ||| | |||||||||||||||||||    
T  30335770 ggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagttttt 30335671  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcct 289  Q
     ||| ||  | | |||||| |||||||||||||    
T  30335670 aaaagttaagggtggaaaaatgcactttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 18488208 - 18488331
Alignment:
Q  134 tggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacat 233  Q
    |||||||||| |||||||||||| |||||||| ||  ||||||||||||| ||||||| | |||| |||||| ||||  |||||||||||||||||| ||    
T  18488208 tggcatgccacgtaggcattgactggtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatat 18488307  T
Q  234 agagggccaaaattgcaagttttt 257  Q
    || || | |||||||||| |||||    
T  18488308 aggggactaaaattgcaacttttt 18488331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 2379894 - 2380023
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||||||||||| |||||| ||||||| ||| |||||||||| |||  |||||||||| ||| |||||||| ||||||||||| ||| |||||    
T  2379894 ggtcaaaattgaccaaaagaaccaaagatgcaaatgagctaaatcttaaggggccaaaattgtag-tttcgtacatag-gggccaaaattacaacttttt 2379991  T
Q  258 gaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||| || | ||||||||||  |||||||||||    
T  2379992 gaaagttag-ggggaaaagtaaactttagccta 2380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 8388593 - 8388463
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  ||||||||||||||| ||||| | | |||||||||  |||  |||||| |||||||||||||||| |||| |||||||||| |||||    
T  8388593 ggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaacttttt 8388494  T
Q  258 gaaacttcgaggggaaaagtgcactttagcct 289  Q
     ||| || | |||| |||||||||||||||||    
T  8388493 aaaagttag-gggggaaagtgcactttagcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 11287937 - 11287779
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||||||||   ||||| ||||| ||||||||||||  |||| || ||||| |||||| ||||||| |||||  |||  ||||||||||||| |    
T  11287937 cacatgtggcatgccgcataggcgttgaccggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggccaaaattgtagtttct 11287838  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcacttta 285  Q
    |||| ||| ||||||||||||||||||||| ||| || | || | ||||||||||||||    
T  11287837 gtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 18979074 - 18979220
Alignment:
Q  142 catgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggcc 241  Q
    |||||||||||||||  |||||||||| | ||||||| ||||  |||||| | | |||||| ||| |||  ||||||||||||||| ||  ||| |||||    
T  18979074 catgtaggcattgacctgtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggcc 18979173  T
Q  242 aaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagc 287  Q
    ||||||||||||| |||||| ||  | ||||||||||||||||||||    
T  18979174 aaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 300
Target Start/End: Original strand, 45114457 - 45114629
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||  ||||| |||||||||||| |||||||||| ||||||| ||  |||  |||||    ||||||||||| |||   ||||||||||||| |    
T  45114457 cacacgtggtgtgccacgtaggcattgaccggtcaaaattaaccaaaatgattaaagttgcaatgaggttaaatcttagaggcc-aaaattgtagtttgt 45114555  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagcctatattctatta 300  Q
    |||||||| |  |||||||||||||||||||||| || | || |||||||||||||| ||||| | ||||||||    
T  45114556 gtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcctttgttctatta 45114629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 24123859 - 24123971
Alignment:
Q  149 gcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattg 248  Q
    ||||| || |||||||||||||||||||||||||| ||||||| | | |||||||||   || |||||||||| |||| |||| ||   |||||||||||    
T  24123859 gcattaaccggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattg 24123958  T
Q  249 caagtttttgaaa 261  Q
    |||||||||||||    
T  24123959 caagtttttgaaa 24123971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 289
Target Start/End: Original strand, 32207302 - 32207425
Alignment:
Q  165 attgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt 264  Q
    ||||||||||||||||||| |||||||   | ||||||||||  ||  ||||||||||||||||||| ||| | | ||||||||||||||||||||  ||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtt 32207401  T
Q  265 cgaggggaaaagtgcactttagcct 289  Q
     | |||| |||||||||||||||||    
T  32207402 ag-gggggaaagtgcactttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 17844435 - 17844276
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||| | |||||||||||||||||| | ||||||||| |||||||||||||| ||  |||   ||||||| || | ||   |||||||||||||||    
T  17844435 cacacgtgacgtgccatgtaggcattgaccgatcaaaattggccaaaaggaccaaagatataaagaggttaaatgtt-agggaccaaaattgtagttttt 17844337  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||||  ||| |||||||  ||| |||||||||||| |  ||| ||||||||||||||||||    
T  17844336 gtacat--aggaccaaaatcacaactttttgaaactttggaggggaaagtgcactttagccta 17844276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 22221335 - 22221466
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| | ||||||| |||| ||| ||| | | |||||||||  |||| ||||||||||||||  ||| ||| ||| ||||||||||||||||||    
T  22221335 gtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttg 22221434  T
Q  259 aaacttcgagg-ggaaaagtgcactttagcct 289  Q
    ||| || | || ||||||||||||||||||||    
T  22221435 aaagttaggggtggaaaagtgcactttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 22227677 - 22227808
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| | ||||||| |||| ||| ||| | | |||||||||  |||| ||||||||||||||  ||| ||| ||| ||||||||||||||||||    
T  22227677 gtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttg 22227776  T
Q  259 aaacttcgagg-ggaaaagtgcactttagcct 289  Q
    ||| || | || ||||||||||||||||||||    
T  22227777 aaagttaggggtggaaaagtgcactttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 11282138 - 11282006
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||| ||||| || ||||| |||||| | |||||||||||  |||| ||||||||  |||||||| |||| ||||||||||||||| |||||     
T  11282138 gtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaacttttta 11282039  T
Q  259 aaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||| ||  | ||| |||||||||||||| ||||    
T  11282038 aaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 40471117 - 40471244
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||| ||||||| || ||||   |||||||||||| ||| |||||||||||||||||||  ||  || ||||||||| ||||||||    
T  40471117 ggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgtattta-tggaccaaaattgtaagttttt 40471215  T
Q  258 gaaacttcga-ggggaaaagtgcacttta 285  Q
     ||| ||  | ||||||||||||||||||    
T  40471216 taaagttaaagggggaaaagtgcacttta 40471244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 289
Target Start/End: Complemental strand, 1823682 - 1823551
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaa-tgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||| |||||||||||||||| |||||| | | |||||||||  ||    |||||||||||||||||| ||||||| |||||||||||||||||     
T  1823682 tcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagttttta 1823583  T
Q  259 aaactt-cgaggggaaaagtgcactttagcct 289  Q
    ||| ||  | ||| |||||| |||||||||||    
T  1823582 aaagttaagggggaaaaagtacactttagcct 1823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 289
Target Start/End: Complemental strand, 1858127 - 1857996
Alignment:
Q  160 tcaaaattgaccaaaaggaccaaaaa-tgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||| |||||||||||||||| |||||| | | |||||||||  ||    |||||||||||||||||| ||||||| |||||||||||||||||     
T  1858127 tcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagttttta 1858028  T
Q  259 aaactt-cgaggggaaaagtgcactttagcct 289  Q
    ||| ||  | ||| |||||| |||||||||||    
T  1858027 aaagttaagggggaaaaagtacactttagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 24359938 - 24359808
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||  ||| ||| |||||||   | |||||||||  |||| |||||||||||||||||| ||||| ||| ||||| |||| |||||    
T  24359938 ggtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttttgtatataga-ggcaaaaatcgcaacttttt 24359840  T
Q  258 gaaacttcgaggggaaaagtgcactttagcct 289  Q
     ||| || ||||| ||||| ||||||||||||    
T  24359839 aaaagttagagggaaaaagagcactttagcct 24359808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 12352082 - 12351920
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||| || ||||  || |||||||| ||||||||||| ||||||||   |||| |||||    | |||||||||  |||| |||||||||||||||    
T  12352082 cacacgtgacacgccacatatgcattgaccggtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttagggggtcaaaattgtagttttt 12351983  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||| ||| ||| ||||||||||| ||||||||| ||  | |||| ||| |||||||||||||    
T  12351982 gtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcct 12351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 29968364 - 29968434
Alignment:
Q  215 aattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcacttta 285  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||   ||||||||||||||||||    
T  29968364 aattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 260
Target Start/End: Complemental strand, 29043536 - 29043427
Alignment:
Q  151 attgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgca 250  Q
    |||||| ||||||||||| | ||||||| |||| || |||| | | ||||||||| ||||  ||||||||||||||||||||||| ||| |||||| ||     
T  29043536 attgactggtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcg 29043437  T
Q  251 agtttttgaa 260  Q
    | ||||||||    
T  29043436 actttttgaa 29043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 24361164 - 24361251
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaat 246  Q
    ||||||||||||  ||||  || ||||||||||| | | ||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  24361164 ggtcaaaattgataaaaaaaactaaaaatgcaaatg-gctaaatcttaaaggattaaaattgtaatttttgtacatagaggaccaaaat 24361251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 43661793 - 43661925
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||| ||||||||||||| ||||||  | |  ||||||||  |||  |||||| |||||||||||||||||||   |||||||||| |||||    
T  43661793 ggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaacttttt 43661892  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcct 289  Q
    |||| ||  | | |||||||||||||| |||||    
T  43661893 gaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 257
Target Start/End: Complemental strand, 43661427 - 43661297
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || |||||  ||||||| ||||||||||| |||||| ||||||| | | |||||||||  |||  |||||| |||||||    
T  43661427 cacacgtggcatgccacatatgcgttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttt 43661328  T
Q  227 tgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||  || ||||||||| || |||||    
T  43661327 tgtacataagggaccaaaattgtaacttttt 43661297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 5514295 - 5514372
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    ||||||||||||||||||  |||| ||| |||||||||||||||| ||| || | ||  |||||||||||||||||||    
T  5514295 aaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgcactttagccta 5514372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 24483195 - 24483143
Alignment:
Q  237 gggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  24483195 gggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 42982677 - 42982760
Alignment:
Q  208 gggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagccta 290  Q
    |||| |||||||||||||||||  | || ||||||||||| ||| ||||| ||||||  ||| |||||||||||||||||||||    
T  42982677 gggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagccta 42982760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 32973907 - 32974037
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||||| ||||||||||  |||||||||| | | |||| | || ||||  |||||||| |||||  ||||| | |||||||||| ||||  |||||    
T  32973907 gtcaaaattgtccaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttg 32974006  T
Q  259 aaacttcgaggggaaaa-gtgcactttagcc 288  Q
    ||| || | |||||||| |||||||||||||    
T  32974007 aaagttaggggggaaaaagtgcactttagcc 32974037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 11456696 - 11456636
Alignment:
Q  231 catagagggccaaaattgcaagtttttgaaacttcgaggg-gaaaagtgcactttagccta 290  Q
    ||||| ||||||||||||||| ||||||||| || | ||| ||||||||||||||||||||    
T  11456696 catagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagccta 11456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 32968586 - 32968454
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||  |||||||||  |||||||||| | | |||| | || ||||  |||||||| |||||  ||||| | |||||||||| ||||  |||||    
T  32968586 gtcaaaattgctcaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttg 32968487  T
Q  259 aaacttcgagggg-aaaagtgcactttagccta 290  Q
    ||| || | |||| |||||||||||||||||||    
T  32968486 aaagttagggggggaaaagtgcactttagccta 32968454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 288
Target Start/End: Complemental strand, 36249692 - 36249552
Alignment:
Q  149 gcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattg 248  Q
    |||||||| |||||||||||  ||||||||  || | |||||| |   |||| | ||| || ||||| ||||  ||||| | |||||  |||||||||||    
T  36249692 gcattgactggtcaaaattggacaaaaggattaatattgcaaagggcctaaaacataagggattaaatttgtcatttttattcataggaggccaaaattg 36249593  T
Q  249 caagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    ||| ||||||||||||  | |||||||||||||||||||||    
T  36249592 caactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 2378991 - 2378914
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatag 235  Q
    |||||||||||| ||||||||||||| |||||||   | || ||||||| |||| |||||| | ||||||||| ||||    
T  2378991 ggtcaaaattgatcaaaaggaccaaagatgcaaataggctagatcttaaggggtcaaaattatggtttttgtatatag 2378914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 23170034 - 23170098
Alignment:
Q  223 tttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    ||||||||| ||| ||  ||||||||||||||||||||| || | |||||||| ||||||||||||    
T  23170034 tttttgtacttaggggatcaaaattgcaagtttttgaaaattaggggggaaaa-tgcactttagcc 23170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 1570 - 1436
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||| | | |||||||||  |||| |||||| |||||||| ||||||| ||| |||||||||||||||||    
T  1570 ggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttt 1471  T
Q  258 gaaacttcga-ggggaaaagtgcactttagcctat 291  Q
     ||| || || |||||||||| |||||||||||||    
T  1470 taaagttagagggggaaaagtacactttagcctat 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 60221 - 60090
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||| ||||||| ||||||| | | |||||| ||  |||| ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  60221 ggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagttttt 60122  T
Q  258 gaaacttcgagg-ggaaaagtgcactttagcc 288  Q
     ||| || |||| |||||||||||||||||||    
T  60121 aaaagttagaggaggaaaagtgcactttagcc 60090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 61429 - 61559
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||||||||||||||||| ||||||||| | |||||| ||  |||  |||||| |||||||||||| ||| |||| ||||||||||||||||    
T  61429 ggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagttttt 61528  T
Q  258 gaaactt-cgaggggaaaagtgcactttagc 287  Q
    |||| ||  | | ||||||||||||||||||    
T  61529 gaaaattaagggaggaaaagtgcactttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 285
Target Start/End: Original strand, 1829543 - 1829701
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||  ||||| |||||||||||| |||||||||||||||||| ||||||| ||||||| | | |||||||||  |||  |||||||||||||||    
T  1829543 cacacgtggtgtgccacgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagttttt 1829642  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggg-gaaaagtgcacttta 285  Q
     ||| ||| ||| ||||||||||||||||| ||| || | |||  ||||||||||||||    
T  1829643 atacttagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 7315041 - 7314880
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||||||||| ||||||| ||||||| | | |||||||||  |||| |||||||| |||||    
T  7315041 cacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgtttt 7314942  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcc 288  Q
      ||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  7314941 gatacttag-gggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 7314880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 290
Target Start/End: Original strand, 16704440 - 16704600
Alignment:
Q  131 acgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgta 230  Q
    ||||||||| ||| ||||||||||||   ||||||||||| ||||||| || |  ||||||   | ||||||||||||| | ||||||||||||||||||    
T  16704440 acgtggcataccacgtaggcattgaccaatcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgta 16704539  T
Q  231 catagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    | ||| ||| ||||||||||||||||||||| ||  | | |||||||||||||||||||||    
T  16704540 cttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagccta 16704600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 133 - 285
Target Start/End: Original strand, 26574999 - 26575150
Alignment:
Q  133 gtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtaca 232  Q
    ||||||||||| |||| ||||||| ||||||||||| | ||||||| ||||  |||||| |||||||||||||  |||  |||||||||||||||||||     
T  26574999 gtggcatgccacgtagacattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtact 26575098  T
Q  233 tagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcacttta 285  Q
    ||  |||  |||||||||||||||||||| || ||| || |||||||||||||    
T  26575099 taaggggttaaaattgcaagtttttgaaagttagagagg-aaagtgcacttta 26575150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 6842253 - 6842386
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaa-agagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttt 256  Q
    ||||||||||| ||||||||| |||| ||||||| ||| | |||| |||| |   ||||||||||||||||| |||||| ||||||||||||||| ||||    
T  6842253 ggtcaaaattggccaaaaggatcaaagatgcaaacagact-aaattttaaggaactaaaattgtagtttttgcacatagggggccaaaattgcaactttt 6842351  T
Q  257 tgaaacttcga-ggggaaaagtgcactttagccta 290  Q
    |||||||| || |||||||||||||||||||||||    
T  6842352 tgaaacttagagggggaaaagtgcactttagccta 6842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 7316233 - 7316398
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| |||||| ||||  | ||||||||||||||||||||||| | ||||||| | | |||||||||| |||  |||||||| ||||     
T  7316233 cacacgtggcttgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggtttc 7316332  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcctat 291  Q
      ||  ||| ||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||    
T  7316333 aatatttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctat 7316398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 3333005 - 3333128
Alignment:
Q  167 tgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcg 266  Q
    |||| ||||||| ||||  |||||| | | ||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||| |    
T  3333005 tgactaaaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttag 3333104  T
Q  267 -aggggaaaagtgcactttagcct 289  Q
     |||||||||||||| ||||||||    
T  3333105 aaggggaaaagtgcaatttagcct 3333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 128 - 275
Target Start/End: Original strand, 10785853 - 10786000
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||||||| ||||||||  ||||||||||   ||||||| ||||  |||||| | | |||||||||| ||||||||||||||||||||    
T  10785853 cacacgtggcgtgccatgtatgcattgactagtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagttttt 10785952  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaa 275  Q
    |||| ||| |||  |||||||||| ||||| ||| || | ||||||||    
T  10785953 gtacttagggggttaaaattgcaaatttttaaaagttaggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 27437959 - 27437825
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||| ||||||||||||||  |||||| ||| |||||||||  |||| ||||||||||||||| |  |||| ||||||||||||||| |||||    
T  27437959 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 27437860  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcctat 291  Q
     ||| ||  | || |||||||||||||||||||||    
T  27437859 taaagttaaggggagaaaagtgcactttagcctat 27437825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 8659427 - 8659263
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||  |||   ||||||| |||||    
T  8659427 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtttt 8659328  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagccta 290  Q
     |||| ||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  8659327 ggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 8659263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 289
Target Start/End: Complemental strand, 3721774 - 3721611
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    |||| |||||||||||| |  || ||||| ||||||||||||  |||||||||||||  |||||  | | |||||||||| ||||  ||||| | |||||    
T  3721774 cacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggtttt 3721675  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcga-ggggaaaagtgcactttagcct 289  Q
     |||| ||| ||| ||||||||||||||||||||| || || ||||||||||||||||||||||    
T  3721674 ggtacttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 3721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 8821991 - 8821871
Alignment:
Q  171 caaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcga-gg 269  Q
    |||||||||||||  |||||  ||| |||||||||  |||   ||||||| ||||| |||| ||| ||||||||||||||||||||||||| || || ||    
T  8821991 caaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagaggg 8821892  T
Q  270 ggaaaagtgcactttagccta 290  Q
    |||||||||||||||||||||    
T  8821891 ggaaaagtgcactttagccta 8821871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 290
Target Start/End: Complemental strand, 26574762 - 26574617
Alignment:
Q  145 gtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaa 244  Q
    ||||||||| |  ||||||||||||| |||| || ||||  |||||| | | |||||||||| || | ||||| ||||||||||||| ||||||  ||||    
T  26574762 gtaggcattaatcggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaa 26574664  T
Q  245 attgcaagtttttgaaacttcgagg-ggaaaagtgcactttagccta 290  Q
    ||||||||||||||||| || |||| || ||| ||||||||||||||    
T  26574663 attgcaagtttttgaaagttagaggtgggaaattgcactttagccta 26574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 26949125 - 26949255
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| |||||  || ||| ||||||| | ||||||||||| | | |||||||||||||||||    
T  26949125 cacatgtggcgtgccatgaaggcattgactggtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagattaaaattgtagttttt 26949224  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaa 261  Q
     ||| |  |||| ||||||||||| |||||||||    
T  26949225 atactt--aggggcaaaattgcaa-tttttgaaa 26949255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 292
Target Start/End: Original strand, 27322039 - 27322172
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    |||||||| || ||||||||| ||| | ||||| | | ||| |||||  |||  |||||||| ||||| |||| ||| |||||||||||||||| |||||    
T  27322039 gtcaaaatagagcaaaaggacgaaataagcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttg 27322138  T
Q  259 aaacttcgaggggaaaagtgcactttagcctata 292  Q
    |||  | | |||||||||||||||||||||||||    
T  27322139 aaagataggggggaaaagtgcactttagcctata 27322172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 6840319 - 6840192
Alignment:
Q  162 aaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaa 261  Q
    |||||||  |||||||| |||| ||||||| |  |||||||||| ||||| |||||| |||||||||||  ||  |||||||||| |||| |||||||||    
T  6840319 aaaattggtcaaaaggatcaaagatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaaggggccaaaatcgcaactttttgaaa 6840220  T
Q  262 cttcgaggggaaaagtgcactttagccta 290  Q
    |||  ||||| ||||||||||| ||||||    
T  6840219 ctt-aagggggaaagtgcacttcagccta 6840192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 283
Target Start/End: Complemental strand, 29473238 - 29473082
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||||||||| |||||||||||| ||| ||||||||| ||||||| ||||| |||||| | |  || ||||  ||||  ||||||||  |||||    
T  29473238 cacatgtggcatgccacgtaggcattgaccggtaaaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggccaaaattgttattttt 29473139  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactt 283  Q
    || ||||| |  |||||||||||| ||||| ||||||  | ||||||||||||||||    
T  29473138 gttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 14823515 - 14823680
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||| |  ||   |||||  |   |||||||||  |||  ||||||||||||| |    
T  14823515 cacacgtggcgtgccacgtaggcattgaccggtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaaaattgtagtttct 14823614  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgagggg--aaaagtgcactttagcctat 291  Q
    |||| ||  |||| |||||||||||||||| ||| ||   ||||  ||||||||||||||||||||    
T  14823615 gtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcctat 14823680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 3722533 - 3722610
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagccta 290  Q
    ||||||| ||||| |||| ||||||| ||||||||||||||||||||| || | | ||||||||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagccta 3722610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 5658887 - 5658810
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatag 235  Q
    ||||||||||||||||||||| ||||  |||||| | | |||||||||| || | |||||||||||||||||||||||    
T  5658887 ggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatag 5658810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 287
Target Start/End: Original strand, 12382650 - 12382811
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttt 226  Q
    ||||||||||||||||  || || ||||| | |||||||||  | |||||||||||| ||||||||| ||||||||||   || | |||||| |||||||    
T  12382650 cacacgtggcatgccaaataagcgttgaccaagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattatagtttt 12382749  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaacttcgagg-ggaaaagtgcactttagc 287  Q
      ||| ||| ||| ||||||| ||| ||||| ||| || |||| ||||||||||||||||||    
T  12382750 aatacttagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagc 12382811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 8660174 - 8660305
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||||  |||||||| ||||  |||||  ||| |||||||||  |||   ||||||| ||||| |||| ||| ||| |||||||||||||||||    
T  8660174 ggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttag-gggtcaaaattgcaagttttt 8660272  T
Q  258 gaaacttcg-aggggaaaagtgcactttagcct 289  Q
    |||| || | |||||||||||||||||||||||    
T  8660273 gaaagttaggaggggaaaagtgcactttagcct 8660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 17496928 - 17496825
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggtt-aaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||| ||||||||||||| |||||||   |||||||||||  |||   ||||||| ||||||||||| |||||||  ||||||| ||||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgtaagttttt 17496829  T
Q  258 gaaa 261  Q
    ||||    
T  17496828 gaaa 17496825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 8822819 - 8822894
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagcc 288  Q
    ||||||| ||||| |||| ||| ||| ||||||||||||||||||||| ||  || ||||||||||||||||||||    
T  8822819 aaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 26717057 - 26717144
Alignment:
Q  133 gtggcatgccatgtaggcattgaca-ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattg 219  Q
    |||||||||||  || ||||||||  |||||||||||| |||||||| ||||  |||||||||| |||||||||| |||| |||||||    
T  26717057 gtggcatgccaattaagcattgacttggtcaaaattgatcaaaaggatcaaagttgcaaaagagctaaatcttaaggggtcaaaattg 26717144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 12350889 - 12350832
Alignment:
Q  197 taaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttt 255  Q
    |||||||||  |||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  12350889 taaatcttagggggttaaaattgtagtttttatacatag-gggtcaaaattgcaagttt 12350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 27318389 - 27318312
Alignment:
Q  214 aaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcctat 291  Q
    ||||||| ||||| |||| ||| |||||||||||||||| ||||||||  | | ||| ||| ||||||||||||||||    
T  27318389 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagatagggggaaaaggtgcactttagcctat 27318312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 14822521 - 14822358
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagt-taaatcttaaagggttaaaattgtagtttt 226  Q
    |||||||||| ||||| ||| |||||||| ||||||||| ||  |||||||  |||  |||||  |||  |||||||||  |||  |||||||||||||     
T  14822521 cacacgtggcgtgccacgtaagcattgaccggtcaaaatagattaaaaggattaaagttgcaat-gagactaaatcttagggggccaaaattgtagtttc 14822423  T
Q  227 tgtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
    | ||| ||  ||||||||||||||||||||||||| ||  | || |||||||||||| |||||||    
T  14822422 tatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagccta 14822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 3333224 - 3333149
Alignment:
Q  213 aaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||||| |||||||| | ||||| ||| |||| |||||| ||||| ||||||  ||||||||||| ||||||||||    
T  3333224 aaaattatagtttttattcatagggggtcaaatttgcaattttttcaaacttataggggaaaagttcactttagcc 3333149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 3333496 - 3333571
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacata 234  Q
    |||||||||| ||||||||| ||||  ||| || | | |||||| || ||||||||||||||||||||||| ||||    
T  3333496 gtcaaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagtttttgttcata 3333571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 4597652 - 4597712
Alignment:
Q  232 atagagggccaaaattgcaagtttttgaaacttcgaggg-gaaaagtgcactttagcctat 291  Q
    |||| |||||||||||||||  ||||||||||| ||||| |||||||| | ||||||||||    
T  4597652 atagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctat 4597712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 27443912 - 27443860
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggac 179  Q
    ||||||||||||| |||||| |||||||| | ||||||||||| |||||||||    
T  27443912 cacacgtggcatgacatgtaagcattgacaaagtcaaaattgaacaaaaggac 27443860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 27447961 - 27448017
Alignment:
Q  236 agggccaaaattgcaagtttttgaaacttc-gaggggaaaagtgcactttagcctat 291  Q
    ||||||||||||| || ||||| ||||||  | ||||||||||||||||||||||||    
T  27447961 agggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctat 27448017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 34834632 - 34834684
Alignment:
Q  241 caaaattgcaagtttttgaaacttcgag-gggaaaagtgcactttagcctata 292  Q
    ||||||||||||||||||||| || | | ||||||||||||||||| ||||||    
T  34834632 caaaattgcaagtttttgaaagttagggagggaaaagtgcactttaacctata 34834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 19618 - 19486
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||||||||| || |||| ||||||| | |||||||||||  || | ||||||||||||||| ||| ||| |||||||||||||||| |||||    
T  19618 gtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggttttg 19519  T
Q  259 aaactt-cgaggggaaaagtgcactttagccta 290  Q
    ||| ||  | |||||||| ||||||||||||||    
T  19518 aaaattaaggggggaaaaatgcactttagccta 19486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 49403 - 49537
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||| ||||||||||||||  |||||| ||| |||||||||  |||| ||||||||||||||| |  |||| ||||||||||||||| |||||    
T  49403 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttt 49502  T
Q  258 gaaactt-cgaggggaaaagtgcactttagcctat 291  Q
     ||| ||  | || |||||||||||||||||||||    
T  49503 taaagttaaggggagaaaagtgcactttagcctat 49537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 39397 - 39341
Alignment:
Q  236 agggccaaaattgcaagtttttgaaacttc-gaggggaaaagtgcactttagcctat 291  Q
    ||||||||||||| || ||||| ||||||  | ||||||||||||||||||||||||    
T  39397 agggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcctat 39341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 43449 - 43501
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgac-aggtcaaaattgaccaaaaggac 179  Q
    ||||||||||||| |||||| |||||||| | ||||||||||| |||||||||    
T  43449 cacacgtggcatgacatgtaagcattgacaaagtcaaaattgaacaaaaggac 43501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 290
Target Start/End: Complemental strand, 17627 - 17468
Alignment:
Q  132 cgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtac 231  Q
    |||||||||||| |||||||||||| |||||||||||   |||| || | ||| |||||| | | ||| ||||   |||  |||||||||||||||||||    
T  17627 cgtggcatgccacgtaggcattgaccggtcaaaattggtaaaaaagatcgaaattgcaaaggggataattcttggggggccaaaattgtagtttttgtac 17528  T
Q  232 atagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagccta 290  Q
     ||| ||||||||||||||||||||| ||| ||  | ||| |||||||||||||||||||    
T  17527 ttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagccta 17468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 288
Target Start/End: Original strand, 18727 - 18877
Alignment:
Q  139 tgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagg 238  Q
    ||||| |||||||||||| |||||||||||||||||| ||  |||  |||||  | | ||||| |||| |||  |||||| |||||||||||| ||| ||    
T  18727 tgccacgtaggcattgaccggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctagggg 18826  T
Q  239 gccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
     |||||||||||| ||||| ||| ||  ||||| |||||||||||||||||    
T  18827 accaaaattgcaaatttttaaaagttaggagggaaaaagtgcactttagcc 18877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 394 - 233
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||||||||||||||  ||||| ||||| |||||||||||   ||||||| |||| ||||||| | | ||| |||||  ||   |||||| ||||||||    
T  394 cacacgtggcatgccacataggcgttgaccggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagttttt 295  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaactt-cgaggggaaaagtgcactttagcc 288  Q
    |||||||| || |||||||||||| ||||||||| ||  | |||| ||||||||||||||||    
T  294 gtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 918 - 1047
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||||||||| ||| || ||||| |||||||||||   |||||||||||| ||||||| | | ||| ||||   |||  |||||| ||||||||    
T  918 cacacgtggcatgccacgtaagcgttgaccggtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagttttt 1017  T
Q  228 gtacatagagggccaaaattgcaagttttt 257  Q
    |||||||  || |||||||||||| |||||    
T  1018 gtacataagggaccaaaattgcaacttttt 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 5408 - 5541
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    |||||||||| |||||||||| ||||  || ||  | | |||||||||| |||  ||||||||||||||||||| ||  ||| |||||||||||||||||    
T  5408 ggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 5507  T
Q  258 gaaactt-cgaggggaaaagtgcactttagccta 290  Q
    |||| ||  | |||||||||||||||||||||||    
T  5508 gaaaattagggggggaaaagtgcactttagccta 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 290
Target Start/End: Complemental strand, 4573 - 4440
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||| |||||||| |||||||  || ||  | | ||||| |||  ||| |||||||||| ||||||||| ||  |||| ||||||| ||||||||    
T  4573 ggtcaaaatcgaccaaaatgaccaaatttgtaatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagttttt 4474  T
Q  258 gaaacttcgaggggaaaa-gtgcactttagccta 290  Q
    |||| || | |||||||| |||||||||||||||    
T  4473 gaaaattaggggggaaaatgtgcactttagccta 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 6461 - 6341
Alignment:
Q  171 caaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaactt-cgagg 269  Q
    ||||||||||||| ||||||||  | |||||||||  |||| ||||||||||||||||||||||| |||| ||||| | || ||||||||||||  | |     
T  6461 caaaaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggc 6362  T
Q  270 ggaaaagtgcactttagccta 290  Q
    |||||||||||||||| ||||    
T  6361 ggaaaagtgcactttaaccta 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 8998 - 9129
Alignment:
Q  159 gtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttg 258  Q
    ||||||||||  |||||||| |||| |||||  || | |||||||||  |||  |||||||||||||||||||||||  ||| |||||  ||| ||||||    
T  8998 gtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatcttag-gggccaaaattgtagtttttgtacataggaggcaaaaatcacaactttttg 9096  T
Q  259 aaacttcgaggggaaaagtgcactttagcctat 291  Q
    ||| |  |  || ||||||||||||||||||||    
T  9097 aaattaaggaggaaaaagtgcactttagcctat 9129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 3248 - 3410
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||| ||||||||| | ||||||||||||  || ||||||| | ||||||| ||||  |||||| | | |||||||||  ||   |||||| ||||||||    
T  3248 cacatgtggcatgctacgtaggcattgaccagtaaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagttttt 3347  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagccta 290  Q
    |||| ||  ||| |||||||| |||||||||||| |  | |||||||||||||||||||||||    
T  3348 gtacctatggggtcaaaattgtaagtttttgaaagtaaggggggaaaagtgcactttagccta 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 299
Target Start/End: Complemental strand, 13305 - 13182
Alignment:
Q  175 aggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaa 274  Q
    ||||||||| |||||||||||||||||||||  ||   |||||||||||||| ||||||||  || ||||||  ||| ||||| ||| || | |||||||    
T  13305 aggaccaaatatgcaaaagagttaaatcttaggggacaaaaattgtagttttcgtacataggaggtcaaaatcacaactttttcaaagttag-ggggaaa 13207  T
Q  275 agtgcactttagcctatattctatt 299  Q
    ||||||||||||||| |||| ||||    
T  13206 agtgcactttagcctttattttatt 13182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 7394 - 7527
Alignment:
Q  167 tgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcg 266  Q
    |||| ||||||| ||||  |||||| | | |||||||||  |||| ||||||||||||| ||||||||| ||| |||||| | || ||||| |||||| |    
T  7394 tgactaaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttag 7493  T
Q  267 a-ggggaaaagtgcactttagcctatattctatt 299  Q
    | ||||| |||||||||||||||| |||| ||||    
T  7494 agggggacaagtgcactttagcctttattttatt 7527  T

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Target: scaffold0049; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 7614 - 7538
Alignment:
Q  212 taaaattgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    |||||||||||||||||| ||||| ||| |||| || ||| ||||| ||||||  ||||| ||||||||||||||||    
T  7614 taaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttatagggggaaagtgcactttagcc 7538  T

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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 23152 - 23081
Alignment:
Q  216 attgtagtttttgtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagcc 288  Q
    ||||| ||||| |||| ||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  23152 attgttgttttggtacttagagggacaaaattgcaagtttttgaaagttag-ggggaaaagtgcactttagcc 23081  T

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Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 261
Target Start/End: Complemental strand, 3836 - 3703
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    |||||||||| ||||| ||||||||||||  ||||||||||||||||| ||  |||  |||||    | |||||||||  ||  ||||||| |||||| |    
T  3836 cacacgtggcgtgccacgtaggcattgaccagtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggggactaaaattatagtttct 3737  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaa 261  Q
     |||  || |||||||||||||||||||||||||    
T  3736 ttactcagggggccaaaattgcaagtttttgaaa 3703  T

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Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 287
Target Start/End: Original strand, 4670 - 4829
Alignment:
Q  128 cacacgtggcatgccatgtaggcattgacaggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagttttt 227  Q
    ||||| || |||| || |||||||||||  |||||||||||  ||||||||  |||  |||||  | | ||||  ||| ||||| ||||||||||||| |    
T  4670 cacacatgacatgtcacgtaggcattgatcggtcaaaattggtcaaaaggattaaagttgcaatggggctaaaatttagagggtcaaaattgtagtttct 4769  T
Q  228 gtacatagagggccaaaattgcaagtttttgaaacttcgaggggaaaagtgcactttagc 287  Q
    |||  ||| |||||||||||||| |||||| ||| || | | || |||||||||||||||    
T  4770 gtatttagggggccaaaattgcatgtttttaaaagttagggagggaaagtgcactttagc 4829  T

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Target: scaffold0093 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 2435 - 2564
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaag-tttt 256  Q
    |||||||||||||||||||||  |||  |||||   || |||||| ||  |||  ||||| || |||||||||| ||| ||| |||||||||||| ||||    
T  2435 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 2534  T
Q  257 tgaaacttcgaggggaaaagtgcactttagc 287  Q
    ||||| || | ||||||||||||||||||||    
T  2535 tgaaagttag-ggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 7058 - 7187
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaag-tttt 256  Q
    |||||||||||||||||||||  |||  |||||   || |||||| ||  |||  ||||| || |||||||||| ||| ||| |||||||||||| ||||    
T  7058 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 7157  T
Q  257 tgaaacttcgaggggaaaagtgcactttagc 287  Q
    ||||| || | ||||||||||||||||||||    
T  7158 tgaaagttag-ggggaaaagtgcactttagc 7187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 48437 - 48339
Alignment:
Q  158 ggtcaaaattgaccaaaaggaccaaaaatgcaaaagagttaaatcttaaagggttaaaattgtagtttttgtacatagagggccaaaattgcaagttttt 257  Q
    ||||||||||||||||| |||||||| ||||||| |   |||||||||  ||   |||||| |||||||||||||||| || |  |||||||||||||||    
T  48437 ggtcaaaattgaccaaa-ggaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttttgtacataggggtc--aaattgcaagttttt 48341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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