View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14943_low_32 (Length: 223)
Name: NF14943_low_32
Description: NF14943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14943_low_32 |
 | |
|
| [»] chr5 (7 HSPs) |
| |
|
| [»] scaffold0440 (1 HSPs) |
| | |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] chr6 (10 HSPs) |
| |
|
| [»] scaffold0665 (1 HSPs) |
| | |
|
| [»] scaffold0500 (1 HSPs) |
| |
|
| [»] scaffold0063 (2 HSPs) |
| |
|
| [»] scaffold0115 (1 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 85 - 223
Target Start/End: Complemental strand, 26713497 - 26713359
Alignment:
| Q |
85 |
attgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaa |
184 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26713497 |
attgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaa |
26713398 |
T |
|
| Q |
185 |
gaaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26713397 |
gaaattgaagttttcaagattggaaatcggccaccgatt |
26713359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 85 - 223
Target Start/End: Complemental strand, 26983235 - 26983097
Alignment:
| Q |
85 |
attgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaa |
184 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26983235 |
attgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaa |
26983136 |
T |
|
| Q |
185 |
gaaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26983135 |
gaaattgaagttttcaagattggaaatcggccaccgatt |
26983097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 33574221 - 33574357
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33574221 |
tgatgacattctgtcattactcttttagtagaaatttttcatgtaattttaagggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
33574320 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33574321 |
aattaaagttttcaagattggaaatcggccaccgatt |
33574357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 34404964 - 34405072
Alignment:
| Q |
89 |
atgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaagaaa |
188 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||| |||||| |
|
|
| T |
34404964 |
atgacattctgtcattactcttttagtagacatttttcatgtaatttttggggttatttattgtaattcattgagttgcaagctacagaagaacaagaaa |
34405063 |
T |
|
| Q |
189 |
ttgaagttt |
197 |
Q |
| |
|
||||||||| |
|
|
| T |
34405064 |
ttgaagttt |
34405072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 15533375 - 15533238
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||| ||||||| ||| |||| || ||||||| |||||||| ||| |
|
|
| T |
15533375 |
tgatgacattctgtcattactcttttagtatgcatttttcatgtaattttagggggttttttattggaattcatgaagctgcaagccgcaaaagaaaaag |
15533276 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
15533275 |
aaaatgaagtttgaagtattggaaatcggccaccgatt |
15533238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 15543557 - 15543420
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||| ||||||| ||| |||| || ||||||| ||||||| ||| |
|
|
| T |
15543557 |
tgatgacattctgtcattactcttttagtatgcatttttcatgtaattttagggggttttttattggaattcatgaagctgcaagccgcaaaagacaaag |
15543458 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
15543457 |
aaaatgaagtttgaagtattggaaatcggccaccgatt |
15543420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 14617599 - 14617490
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
|||||||| |||| ||||||| |||| |||||||||| ||| |||||||| || | ||| ||||| || ||||||| ||||||||||||||||| |||| |
|
|
| T |
14617599 |
tgatgacactctgtcattactagtttattagacatttttcatataattttaaggat-attcattgtgattcatggagctgcaagctacaaaagaacaaga |
14617501 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
14617500 |
aattgaagttt |
14617490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 9080 - 9215
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9080 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
9179 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgat |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
9180 |
aattgaagttttcaagattggaaatcggccaccgat |
9215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 11139723 - 11139588
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
11139723 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
11139624 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgat |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
11139623 |
aattgaagttttcaagattggaaatcggccaccgat |
11139588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 22627487 - 22627352
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22627487 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
22627388 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgat |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
22627387 |
aattgaagttttcaagattggaaatcggccaccgat |
22627352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 39564638 - 39564506
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39564638 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
39564539 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccacc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
39564538 |
aattgaagttttcaagattggaaatcggccacc |
39564506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 6966240 - 6966376
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6966240 |
ttgatgacattctgtcattactcttttagtagacatttttcatgtaatttttggggttatttattgtaattcatggagttgcaagctacaaaagaagaag |
6966339 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgat |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6966340 |
aaattgaagttttcaagattggaaatcggccaccgat |
6966376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 35773704 - 35773574
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35773704 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
35773605 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggcca |
217 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |
|
|
| T |
35773604 |
aattgaagttttcaagattggaaaccggcca |
35773574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 24782537 - 24782672
Alignment:
| Q |
88 |
gatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaagaa |
187 |
Q |
| |
|
||||||||||| |||||||||||| ||| ||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
24782537 |
gatgacattctatcattactcttttggtaaacatttttcatgttatttgaggggttatttattgtaattcatggagttgcaagctacaaaagaagaagaa |
24782636 |
T |
|
| Q |
188 |
attgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24782637 |
attgaagtttttaagattggaaatcggccaccgatt |
24782672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 17864246 - 17864136
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
17864246 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaacaaga |
17864147 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
17864146 |
aattgaagttt |
17864136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 17867527 - 17867415
Alignment:
| Q |
85 |
attgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaa |
184 |
Q |
| |
|
||||||||||||| | ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
17867527 |
attgatgacattccgtcattactcttttaatagacatttttcatgtaattttaggagttatttattgtaattcatggagttgcaagctacaaaagaacaa |
17867428 |
T |
|
| Q |
185 |
gaaattgaagttt |
197 |
Q |
| |
|
||||||||||||| |
|
|
| T |
17867427 |
gaaattgaagttt |
17867415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 33312095 - 33312232
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggg-gttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||| || |||||||||||||||||| ||||| ||||||||||||||| || ||||||| ||| ||||||| ||||||| |||||||| ||| |
|
|
| T |
33312095 |
tgatgacattttgtcattactcttttagtagaaatttttcatgtaattttagggttttttttattggaattcatggagctgcaagccacaaaagacaaag |
33312194 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
33312195 |
aaaatgaagtttgaagtattggaaatcggccaccgatt |
33312232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 23760783 - 23760646
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||| ||||||| ||| |||| || ||||||| ||||||| ||| |
|
|
| T |
23760783 |
tgatgacattctctcattactcttttagtaggcatttttcatgtaattttagggggttttttattggaattcatgaagctgcaagccgcaaaagacaaag |
23760684 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
23760683 |
aaaatgaagtttgaagtattggaaatcggccaccgatt |
23760646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 294026 - 294162
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||| |||| ||||||| |||| |||||||||| ||||||||||| | || |||| ||||| || ||||||| | | ||||||||||||| ||| |
|
|
| T |
294026 |
ttgatgacgctctgtcattactagtttattagacatttttcatgtaatttt-gaggatattcattgtgattcatggagctcccagctacaaaagaacaag |
294124 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||| |
|
|
| T |
294125 |
aaattgaagtttagaagactggaattcggccaccgatt |
294162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 1310013 - 1309920
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaaga |
180 |
Q |
| |
|
|||||||||| || |||||| ||||||||| |||||| ||| |||||||||| | |||| |||||||| |||||||||||||| |||||||| |
|
|
| T |
1310013 |
tgatgacattatgtcattacatttttagtaggcatttttcatataattttaggtgatattcattgtaatttatggagttgcaagccacaaaaga |
1309920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 12171115 - 12171251
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12171115 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
12171214 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12171215 |
aattgaagtttgcaagattggaaatcggccaccgatt |
12171251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 651632 - 651520
Alignment:
| Q |
85 |
attgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaa |
184 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
651632 |
attgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaacaa |
651533 |
T |
|
| Q |
185 |
gaaattgaagttt |
197 |
Q |
| |
|
||||||||||||| |
|
|
| T |
651532 |
gaaattgaagttt |
651520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 648356 - 648246
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
648356 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtcattcatggagttgcaagctacaaaagaacaaga |
648257 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
648256 |
aattgaagttt |
648246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 26063814 - 26063735
Alignment:
| Q |
117 |
gacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaagaaattgaagttt |
197 |
Q |
| |
|
|||||||| |||||||||||| || | ||| ||||| || ||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
26063814 |
gacatttttcatgtaattttaaggat-attcattgtgattcatggagctgcaagctacaaaagaacaagaaattgaagttt |
26063735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 117; Significance: 9e-60; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 15537394 - 15537530
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15537394 |
tgatgacattctgtcattactcttttaatagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaaga |
15537493 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15537494 |
aattgaagttttcaagattggaaatcagccaccgatt |
15537530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 15534181 - 15534318
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
15534181 |
ttgatgacattatgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaagaac |
15534280 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15534281 |
aaattgaagttttcaagattggaaatcggccatcgatt |
15534318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 19665837 - 19665701
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
19665837 |
tgatgacattctatcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttccaagctacaaaagaagaaga |
19665738 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19665737 |
aattgaagtttttaagattggaaatcggccaccgatt |
19665701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 32705446 - 32705336
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
32705446 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaacaaga |
32705347 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
32705346 |
aattgaagttt |
32705336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 14789693 - 14789802
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| |
|
|
| T |
14789693 |
ttgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattg--attcatggagttgcaagctacaaaagaacaag |
14789790 |
T |
|
| Q |
186 |
aaattgaagttt |
197 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14789791 |
aaattgaagttt |
14789802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 14794718 - 14794830
Alignment:
| Q |
87 |
tgatgacattctgacattactctttt--agtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaa |
184 |
Q |
| |
|
||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
14794718 |
tgatgacattctgtcattacttttttttagtagacatttctcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaacaa |
14794817 |
T |
|
| Q |
185 |
gaaattgaagttt |
197 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14794818 |
gaaattgaagttt |
14794830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 223
Target Start/End: Complemental strand, 13018358 - 13018220
Alignment:
| Q |
85 |
attgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaaga |
183 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||| |||||| ||| |||| || ||||||| | |||||| | |
|
|
| T |
13018358 |
attgatgacattctgtcattactcttttagtaggcatttttcatgtaattttagggggtttcttattggaattcatgaagctgcaagccaaaaaagacaa |
13018259 |
T |
|
| Q |
184 |
agaaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||||| ||||| ||| ||| | ||||||||||||||||| |
|
|
| T |
13018258 |
agaaaatgaag-tttgaagtattgaaatcggccaccgatt |
13018220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 22246631 - 22246683
Alignment:
| Q |
89 |
atgacattctgacattactcttttagtagacattttccatgtaattttagggg |
141 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
22246631 |
atgacattctgtcattactcttttagtggacatttttcatgtaattttagggg |
22246683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 1837575 - 1837656
Alignment:
| Q |
115 |
tagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaagaaattgaagttt |
197 |
Q |
| |
|
|||||||||| |||||||||||| || | ||| ||||| || ||||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
1837575 |
tagacatttttcatgtaattttaaggat-attcattgtgattcatggagctgcaagctacaaaaaaacaagaaattgaagttt |
1837656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 22220939 - 22220993
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttagggg |
141 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| ||| |||||||||||||||| |
|
|
| T |
22220939 |
tgatgacattctgtcattactcttttagtgaacaattttcatgtaattttagggg |
22220993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 10759234 - 10759345
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
10759234 |
ttgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattcatggagttgcaagctacaaaagaacaag |
10759333 |
T |
|
| Q |
186 |
aaattgaagttt |
197 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10759334 |
aaattgaagttt |
10759345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 13495151 - 13495261
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
13495151 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgttattcatggagttgcaagctacaaaagaacaaga |
13495250 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
13495251 |
aattgaagttt |
13495261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 13492356 - 13492467
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
13492356 |
ttgatgacattctgtaattactcttttagtagatatttttcatgtaattttagggattatttattgtaatttatggagttgcaagctacaaaagaacaag |
13492455 |
T |
|
| Q |
186 |
aaattgaagttt |
197 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13492456 |
aaattgaagttt |
13492467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 32507027 - 32506918
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
|||||||| |||| ||||||| |||| |||||||||| ||||||||||| || | ||| ||||| || ||||||| ||||||||||||||||| |||| |
|
|
| T |
32507027 |
tgatgacactctgtcattactaatttattagacattttttatgtaattttaaggat-attcattgtgattcatggagctgcaagctacaaaagaacaaga |
32506929 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
32506928 |
aattgaagttt |
32506918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 1935706 - 1935790
Alignment:
| Q |
96 |
tctgacattactcttttagtagaca-ttttccatgtaa-ttttaggggttatttattgtaatgcatggagttgcaagctacaaaa |
178 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||||||| ||||| | | |||| |||||||| ||||||| ||||||| |||||| |
|
|
| T |
1935706 |
tctgtcattactcttttagtaggcatttttccatgtaatttttaagtgatattcattgtaattcatggagctgcaagccacaaaa |
1935790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 4843176 - 4843066
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
4843176 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttaggggttatttattgtaattaatggagttgcaagctacaaaagaacaaga |
4843077 |
T |
|
| Q |
187 |
aattgaagttt |
197 |
Q |
| |
|
||||||||||| |
|
|
| T |
4843076 |
aattgaagttt |
4843066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 31527460 - 31527597
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||| || ||||||||| |||||| ||||||| ||| |||| || |||||||| ||||||| ||| |
|
|
| T |
31527460 |
tgatgacattctgtcattactcttttagtaggcatttttcaagtaattttagggggttttttattggaattcatgaagctgcaagctgcaaaagacaaag |
31527559 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
31527560 |
aaaatgaagtttgaagtattggaaatcggccaccgatt |
31527597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 31625618 - 31625754
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| ||| | || ||||||||||||||| |||||||| |||| |
|
|
| T |
31625618 |
tgatgacatcttgtcattactcttttagtagacatttttgatgtaattttaggggttattcattttgattcatggagttgcaagccacaaaagacaaaga |
31625717 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|| |||||||| || || ||||||||| ||| |||| |
|
|
| T |
31625718 |
aaatgaagtttcaaatataggaaatcgggcactgatt |
31625754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 36325992 - 36326102
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
||||||||| |||| ||||||| |||| |||||||||| |||||||||||| || | ||| ||||| || ||||||| ||||||||||||||||| ||| |
|
|
| T |
36325992 |
ttgatgacactctgtcattactagtttattagacatttttcatgtaattttaaggat-attcattgtgattcatggagctgcaagctacaaaagaacaag |
36326090 |
T |
|
| Q |
186 |
aaattgaagttt |
197 |
Q |
| |
|
|||||||||||| |
|
|
| T |
36326091 |
aaattgaagttt |
36326102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0665 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0665
Description:
Target: scaffold0665; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 820 - 707
Alignment:
| Q |
86 |
ttgatgacattctgacattactcttttagtagacattttccatgt-aattttagggg-ttatttattgtaatgcatggagttgcaagctacaaaagaaga |
183 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| | | || ||||||||||||||||||||||||| | |
|
|
| T |
820 |
ttgatgacattctgtcattactcttttagtagacatttttcatgtaaattttaggggtttattttatttgattcatggagttgcaagctacaaaagaaca |
721 |
T |
|
| Q |
184 |
agaaattgaagttt |
197 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
720 |
agaaattgaagttt |
707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 1762 - 1899
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttagg-ggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||| ||| |||| || ||||||| |||||||| ||| |
|
|
| T |
1762 |
tgatgacattctatcattactcttttagtagacatttttcatgtaattttaggtggtttcttattggaattcatgaagctgcaagccacaaaagacaaag |
1861 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| || ||||||||||||||||||||| |
|
|
| T |
1862 |
aaaatgaagtttgaaatattggaaatcggccaccgatt |
1899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 13272 - 13132
Alignment:
| Q |
84 |
cattgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaag |
182 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||| ||| |||| || ||||||| |||||||| |
|
|
| T |
13272 |
cattgatgacattctgtcattactcttttagtagacatttttcatgtaattttagggggtttcttattggaattcatgaagctgcaagccacaaaagaca |
13173 |
T |
|
| Q |
183 |
aagaaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||| |||| |
|
|
| T |
13172 |
aagaaaatgaagtttgaagtattggaaatcggccactgatt |
13132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 8166 - 8029
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaatttta-ggggttatttattgtaatgcatggagttgcaagctacaaaagaagaag |
185 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||| ||| |||| || ||||||| |||||||| ||| |
|
|
| T |
8166 |
tgatgacattctgtcattactcttttagtagacatttttcatgtaattttagggggtttcttattggaattcatgaagctgcaagccacaaaagacaaag |
8067 |
T |
|
| Q |
186 |
aaattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
||| |||||||| | |||||||||||||||| |||| |
|
|
| T |
8066 |
aaaatgaagtttgaattattggaaatcggccactgatt |
8029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0115
Description:
Target: scaffold0115; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 189 - 53
Alignment:
| Q |
87 |
tgatgacattctgacattactcttttagtagacattttccatgtaattttaggggttatttattgtaatgcatggagttgcaagctacaaaagaagaaga |
186 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| ||||||| ||| ||| || ||||||| |||||| |||| |
|
|
| T |
189 |
tgatgacattctgtcattactcttttagtatgcatttttcatgtaattttaggggttttttattggaattcattaagctgcaagccgcaaaagtcaaaga |
90 |
T |
|
| Q |
187 |
aattgaagttttcaagattggaaatcggccaccgatt |
223 |
Q |
| |
|
|| |||||||| | ||||||||||||||||||||| |
|
|
| T |
89 |
aaatgaagtttgaagtattggaaatcggccaccgatt |
53 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University