View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14944_high_32 (Length: 236)
Name: NF14944_high_32
Description: NF14944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14944_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43541526 - 43541748
Alignment:
| Q |
1 |
agcgtttataagcaggagacatctctcaggtggcaagttgattttgtgcggttaagttagatccaaacaaaacgctacgatggtaatgaagcctatctaa |
100 |
Q |
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| T |
43541526 |
agcgtttataagcaggagacatctctcaggtggcaagttgattttgtgcggttaagttaggtccaaacaaaacgctacgatggtaatgaagcctatctaa |
43541625 |
T |
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| Q |
101 |
gattcgttga--ctatctaaactatcttcacaatttagatgcatattatactttttatgataagatgaaggaaaagcttttcttcatactccacgtctta |
198 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43541626 |
gattcgttgagactatctaaactatcttcacaatttagatgcatattatactttttatgataagatgaaggaaaagcttttcttcatactccacgtctta |
43541725 |
T |
|
| Q |
199 |
gtagcctaaaattcagtgttatt |
221 |
Q |
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||| ||||||||||||||||||| |
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| T |
43541726 |
gtaacctaaaattcagtgttatt |
43541748 |
T |
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