View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14944_low_21 (Length: 340)

Name: NF14944_low_21
Description: NF14944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14944_low_21
NF14944_low_21
[»] chr6 (62 HSPs)
chr6 (18-187)||(26478831-26479000)
chr6 (188-340)||(2598007-2598159)
chr6 (183-339)||(2707541-2707698)
chr6 (229-340)||(29050353-29050465)
chr6 (229-340)||(30379098-30379210)
chr6 (231-340)||(1077318-1077428)
chr6 (239-337)||(6503802-6503900)
chr6 (239-340)||(3408270-3408371)
chr6 (188-338)||(12626719-12626870)
chr6 (186-340)||(17943117-17943272)
chr6 (239-338)||(31376000-31376099)
chr6 (231-340)||(10256318-10256428)
chr6 (239-340)||(1915302-1915403)
chr6 (230-340)||(26392958-26393069)
chr6 (238-340)||(2390346-2390448)
chr6 (239-340)||(8178208-8178309)
chr6 (187-340)||(9382600-9382754)
chr6 (239-338)||(12612930-12613029)
chr6 (231-340)||(17428222-17428332)
chr6 (231-340)||(12612798-12612908)
chr6 (229-340)||(3258755-3258868)
chr6 (230-340)||(6785050-6785158)
chr6 (239-340)||(16193391-16193492)
chr6 (239-340)||(25820508-25820609)
chr6 (229-333)||(11133962-11134068)
chr6 (230-340)||(26230882-26230992)
chr6 (240-340)||(26196281-26196382)
chr6 (239-298)||(3258990-3259049)
chr6 (239-298)||(26393192-26393251)
chr6 (239-295)||(17942937-17942993)
chr6 (239-298)||(12626535-12626594)
chr6 (239-298)||(17515006-17515065)
chr6 (239-298)||(29050171-29050230)
chr6 (240-298)||(6785281-6785339)
chr6 (231-298)||(10931334-10931402)
chr6 (240-300)||(17428453-17428513)
chr6 (239-295)||(26936506-26936562)
chr6 (239-298)||(2390164-2390223)
chr6 (239-298)||(2707358-2707417)
chr6 (239-298)||(6503617-6503676)
chr6 (239-298)||(9382416-9382475)
chr6 (240-298)||(3408089-3408147)
chr6 (231-340)||(10931098-10931207)
chr6 (240-298)||(16193210-16193268)
chr6 (240-297)||(8178433-8178490)
chr6 (243-300)||(26231113-26231170)
chr6 (300-340)||(35223919-35223959)
chr6 (239-298)||(1915526-1915585)
chr6 (242-300)||(11133775-11133833)
chr6 (172-212)||(3408400-3408440)
chr6 (238-298)||(30378915-30378975)
chr6 (258-298)||(35224082-35224122)
chr6 (239-298)||(26196504-26196563)
chr6 (186-215)||(8178538-8178567)
chr6 (239-276)||(12613026-12613063)
chr6 (229-277)||(12626495-12626544)
chr6 (229-277)||(17942897-17942946)
chr6 (186-215)||(30457520-30457549)
chr6 (239-298)||(6503588-6503645)
chr6 (230-277)||(6785331-6785379)
chr6 (183-215)||(30378830-30378862)
chr6 (239-271)||(35224130-35224162)
[»] chr7 (99 HSPs)
chr7 (179-340)||(11476454-11476616)
chr7 (230-340)||(8162662-8162772)
chr7 (230-340)||(35600071-35600182)
chr7 (231-340)||(1469443-1469553)
chr7 (239-340)||(43752735-43752836)
chr7 (240-340)||(23842386-23842486)
chr7 (188-340)||(31684041-31684194)
chr7 (231-340)||(43968209-43968319)
chr7 (188-340)||(48628886-48629039)
chr7 (231-340)||(30798319-30798428)
chr7 (231-340)||(33884400-33884509)
chr7 (239-340)||(44544490-44544591)
chr7 (239-340)||(47219226-47219327)
chr7 (229-340)||(37393946-37394058)
chr7 (229-340)||(41113458-41113570)
chr7 (188-340)||(47294198-47294351)
chr7 (229-336)||(11050209-11050317)
chr7 (229-340)||(30876340-30876452)
chr7 (240-340)||(38427523-38427623)
chr7 (230-340)||(2960589-2960700)
chr7 (238-340)||(45723449-45723551)
chr7 (239-340)||(47281083-47281184)
chr7 (239-340)||(221356-221457)
chr7 (229-340)||(44800358-44800470)
chr7 (240-340)||(47272062-47272162)
chr7 (230-340)||(47579036-47579147)
chr7 (239-333)||(42888937-42889031)
chr7 (239-336)||(5106127-5106223)
chr7 (231-340)||(18353225-18353336)
chr7 (239-338)||(40851357-40851456)
chr7 (239-340)||(47120072-47120175)
chr7 (239-340)||(27364298-27364399)
chr7 (239-300)||(42979519-42979580)
chr7 (257-333)||(30971918-30971994)
chr7 (239-340)||(41139368-41139472)
chr7 (240-340)||(42979299-42979398)
chr7 (229-340)||(29248423-29248531)
chr7 (229-298)||(40520775-40520845)
chr7 (186-298)||(40851128-40851241)
chr7 (239-340)||(7336141-7336241)
chr7 (188-298)||(31684317-31684428)
chr7 (239-298)||(2960768-2960827)
chr7 (239-298)||(44544308-44544367)
chr7 (239-298)||(45233641-45233700)
chr7 (231-300)||(30876149-30876219)
chr7 (240-298)||(35600305-35600363)
chr7 (239-300)||(1469674-1469735)
chr7 (183-298)||(47294474-47294590)
chr7 (238-298)||(3797696-3797756)
chr7 (231-298)||(44550982-44551050)
chr7 (238-298)||(48628703-48628763)
chr7 (239-298)||(11476739-11476798)
chr7 (239-298)||(47219044-47219103)
chr7 (239-298)||(47271880-47271939)
chr7 (229-298)||(43968442-43968512)
chr7 (239-300)||(221195-221256)
chr7 (230-298)||(47119880-47119949)
chr7 (240-300)||(39033962-39034022)
chr7 (285-340)||(4923297-4923352)
chr7 (239-298)||(11050444-11050503)
chr7 (239-298)||(18353043-18353102)
chr7 (239-298)||(29248241-29248300)
chr7 (239-298)||(33884224-33884283)
chr7 (239-298)||(42888774-42888833)
chr7 (239-298)||(47281309-47281368)
chr7 (183-279)||(25801468-25801565)
chr7 (240-298)||(27364522-27364580)
chr7 (240-298)||(30798551-30798609)
chr7 (240-298)||(38427745-38427803)
chr7 (240-293)||(44800598-44800651)
chr7 (240-300)||(30972122-30972182)
chr7 (238-298)||(41107268-41107328)
chr7 (238-298)||(41139595-41139655)
chr7 (242-298)||(43025014-43025070)
chr7 (240-300)||(45723672-45723732)
chr7 (240-295)||(7335960-7336015)
chr7 (240-295)||(8162898-8162953)
chr7 (301-340)||(27774189-27774228)
chr7 (239-298)||(37394181-37394239)
chr7 (240-298)||(4923116-4923174)
chr7 (240-298)||(37354443-37354501)
chr7 (230-298)||(23842194-23842263)
chr7 (257-298)||(40520835-40520876)
chr7 (229-277)||(47271841-47271889)
chr7 (301-340)||(3797544-3797583)
chr7 (239-278)||(31793822-31793861)
chr7 (301-340)||(37354284-37354323)
chr7 (183-214)||(45233726-45233757)
chr7 (235-277)||(27692026-27692068)
chr7 (229-277)||(18353003-18353052)
chr7 (229-277)||(27364572-27364621)
chr7 (229-277)||(30798601-30798650)
chr7 (229-277)||(37394230-37394279)
chr7 (239-300)||(47579268-47579329)
chr7 (229-275)||(3797490-3797538)
chr7 (230-277)||(31793852-31793900)
chr7 (239-279)||(43025170-43025210)
chr7 (179-215)||(47218954-47218990)
chr7 (187-215)||(47281029-47281057)
[»] chr5 (97 HSPs)
chr5 (230-340)||(1052614-1052725)
chr5 (229-340)||(11000676-11000788)
chr5 (188-340)||(6252053-6252206)
chr5 (231-340)||(27457147-27457257)
chr5 (238-338)||(26593238-26593338)
chr5 (229-340)||(31710363-31710475)
chr5 (186-340)||(41282423-41282578)
chr5 (240-340)||(43166229-43166329)
chr5 (231-340)||(6600086-6600196)
chr5 (230-340)||(30297697-30297809)
chr5 (229-340)||(6739903-6740015)
chr5 (229-340)||(28078353-28078465)
chr5 (229-340)||(8689653-8689764)
chr5 (188-340)||(20408614-20408767)
chr5 (239-340)||(23128871-23128973)
chr5 (231-340)||(27116049-27116159)
chr5 (188-340)||(38964021-38964174)
chr5 (240-340)||(39001985-39002085)
chr5 (230-340)||(3351951-3352062)
chr5 (187-340)||(35342261-35342415)
chr5 (231-340)||(20079208-20079318)
chr5 (229-338)||(39824639-39824749)
chr5 (231-340)||(40075031-40075141)
chr5 (231-340)||(42993599-42993709)
chr5 (239-340)||(8215981-8216082)
chr5 (239-340)||(8694947-8695048)
chr5 (239-340)||(11935526-11935627)
chr5 (231-340)||(14952405-14952514)
chr5 (240-340)||(4015834-4015934)
chr5 (240-340)||(30863334-30863433)
chr5 (188-340)||(19659408-19659561)
chr5 (239-340)||(16095919-16096020)
chr5 (240-340)||(30208362-30208462)
chr5 (240-340)||(33760430-33760530)
chr5 (258-340)||(14717686-14717768)
chr5 (263-340)||(11692130-11692207)
chr5 (239-340)||(19398152-19398253)
chr5 (231-340)||(27510052-27510162)
chr5 (231-298)||(16752006-16752074)
chr5 (239-298)||(6740138-6740197)
chr5 (239-298)||(14717504-14717563)
chr5 (239-298)||(42993417-42993476)
chr5 (240-298)||(19398376-19398434)
chr5 (238-300)||(23129094-23129156)
chr5 (239-300)||(4016054-4016115)
chr5 (239-324)||(6332873-6332958)
chr5 (230-298)||(14952213-14952282)
chr5 (229-297)||(30863141-30863210)
chr5 (238-298)||(28078588-28078648)
chr5 (239-298)||(6251892-6251951)
chr5 (239-298)||(6331276-6331335)
chr5 (239-298)||(6600319-6600378)
chr5 (239-298)||(8689471-8689530)
chr5 (239-298)||(20408432-20408491)
chr5 (239-298)||(30297932-30297991)
chr5 (239-298)||(41282241-41282300)
chr5 (239-298)||(43166443-43166502)
chr5 (239-297)||(31710181-31710239)
chr5 (240-298)||(37923581-37923639)
chr5 (240-297)||(39824456-39824513)
chr5 (239-295)||(11692333-11692389)
chr5 (239-295)||(33760656-33760712)
chr5 (239-298)||(3352184-3352243)
chr5 (239-298)||(11000911-11000970)
chr5 (239-298)||(26035529-26035588)
chr5 (240-295)||(39401952-39402007)
chr5 (238-300)||(27509876-27509938)
chr5 (238-298)||(8215798-8215858)
chr5 (238-298)||(16096142-16096202)
chr5 (239-295)||(20079443-20079499)
chr5 (242-298)||(20517060-20517116)
chr5 (239-295)||(35342079-35342135)
chr5 (239-298)||(1052435-1052494)
chr5 (239-294)||(17002343-17002398)
chr5 (239-298)||(26593463-26593522)
chr5 (230-275)||(16752242-16752288)
chr5 (240-298)||(27116276-27116334)
chr5 (240-298)||(40074850-40074908)
chr5 (229-290)||(42263047-42263108)
chr5 (242-298)||(19661814-19661870)
chr5 (181-275)||(26035266-26035361)
chr5 (239-295)||(38964299-38964355)
chr5 (301-340)||(445035-445074)
chr5 (239-282)||(567707-567750)
chr5 (188-277)||(6600369-6600459)
chr5 (301-340)||(16752197-16752236)
chr5 (230-277)||(27509839-27509886)
chr5 (239-277)||(9919241-9919279)
chr5 (185-215)||(20408347-20408377)
chr5 (239-300)||(444853-444914)
chr5 (240-277)||(6251864-6251901)
chr5 (229-277)||(20408392-20408441)
chr5 (229-273)||(27116331-27116376)
chr5 (229-277)||(31710141-31710190)
chr5 (183-215)||(3351904-3351936)
chr5 (230-277)||(17002389-17002437)
chr5 (231-274)||(39002201-39002245)
[»] chr2 (95 HSPs)
chr2 (239-340)||(2456091-2456192)
chr2 (230-340)||(27328665-27328776)
chr2 (239-340)||(36444187-36444288)
chr2 (229-340)||(2314923-2315035)
chr2 (229-340)||(11949374-11949486)
chr2 (186-340)||(12759655-12759810)
chr2 (239-338)||(2094369-2094468)
chr2 (187-340)||(41500408-41500562)
chr2 (181-340)||(771876-772035)
chr2 (239-340)||(9276655-9276756)
chr2 (239-340)||(14630695-14630796)
chr2 (239-340)||(16246152-16246253)
chr2 (229-340)||(7379044-7379155)
chr2 (230-340)||(17484499-17484610)
chr2 (239-340)||(28650385-28650486)
chr2 (239-340)||(33106928-33107029)
chr2 (239-340)||(37838378-37838479)
chr2 (229-340)||(2057007-2057119)
chr2 (240-340)||(34253223-34253323)
chr2 (229-340)||(40854690-40854802)
chr2 (188-340)||(36211127-36211281)
chr2 (179-340)||(37732091-37732253)
chr2 (242-340)||(17134310-17134407)
chr2 (231-340)||(3430575-3430684)
chr2 (239-340)||(7297193-7297294)
chr2 (239-340)||(8899763-8899863)
chr2 (240-340)||(921103-921203)
chr2 (229-340)||(42630043-42630155)
chr2 (231-340)||(1106509-1106619)
chr2 (231-340)||(38751129-38751239)
chr2 (229-315)||(28216912-28216999)
chr2 (230-340)||(29737829-29737940)
chr2 (239-340)||(19180502-19180603)
chr2 (239-340)||(45124200-45124301)
chr2 (239-331)||(9331846-9331938)
chr2 (231-340)||(25087746-25087856)
chr2 (257-340)||(33865244-33865327)
chr2 (229-298)||(34253031-34253100)
chr2 (240-336)||(43249372-43249468)
chr2 (239-298)||(7297415-7297474)
chr2 (239-298)||(45124018-45124077)
chr2 (229-298)||(772158-772228)
chr2 (188-340)||(23671719-23671871)
chr2 (239-300)||(23673054-23673115)
chr2 (231-297)||(37653998-37654065)
chr2 (240-298)||(920922-920980)
chr2 (229-298)||(27328475-27328545)
chr2 (230-298)||(11949612-11949681)
chr2 (238-295)||(19511520-19511577)
chr2 (240-297)||(41178203-41178260)
chr2 (230-298)||(42629845-42629914)
chr2 (238-298)||(2056824-2056884)
chr2 (239-295)||(17484736-17484792)
chr2 (239-298)||(9276473-9276532)
chr2 (240-298)||(36210946-36211004)
chr2 (240-298)||(38750948-38751006)
chr2 (240-300)||(1106740-1106800)
chr2 (231-298)||(8396734-8396802)
chr2 (242-298)||(8899584-8899640)
chr2 (238-298)||(25087979-25088039)
chr2 (238-298)||(28650611-28650671)
chr2 (239-298)||(2315158-2315217)
chr2 (239-298)||(2455909-2455968)
chr2 (239-298)||(12759932-12759991)
chr2 (239-298)||(16246376-16246435)
chr2 (239-306)||(41177994-41178061)
chr2 (239-300)||(33107150-33107211)
chr2 (229-277)||(37654237-37654286)
chr2 (231-295)||(40854499-40854564)
chr2 (239-295)||(29737647-29737703)
chr2 (239-298)||(3430807-3430866)
chr2 (239-298)||(7378862-7378921)
chr2 (239-298)||(19916169-19916228)
chr2 (238-300)||(33865448-33865510)
chr2 (240-297)||(2094594-2094651)
chr2 (239-288)||(3358109-3358158)
chr2 (231-275)||(19915957-19916002)
chr2 (239-279)||(9331664-9331704)
chr2 (244-300)||(36444409-36444465)
chr2 (246-298)||(43249595-43249647)
chr2 (301-340)||(8396572-8396611)
chr2 (239-298)||(17134128-17134187)
chr2 (239-298)||(19180321-19180380)
chr2 (301-340)||(19916008-19916047)
chr2 (241-300)||(37838180-37838239)
chr2 (239-277)||(19180292-19180330)
chr2 (240-298)||(37732376-37732434)
chr2 (229-277)||(3430857-3430906)
chr2 (182-215)||(8899888-8899921)
chr2 (182-215)||(28650327-28650360)
chr2 (257-298)||(41500685-41500726)
chr2 (179-215)||(920831-920867)
chr2 (187-215)||(16246489-16246517)
chr2 (239-271)||(29737618-29737650)
chr2 (187-215)||(41178315-41178343)
[»] chr8 (86 HSPs)
chr8 (229-340)||(23972243-23972355)
chr8 (231-340)||(43806483-43806593)
chr8 (239-340)||(260058-260159)
chr8 (239-340)||(655762-655863)
chr8 (239-340)||(841497-841598)
chr8 (239-340)||(36400029-36400130)
chr8 (183-340)||(37933723-37933881)
chr8 (231-340)||(28496305-28496415)
chr8 (239-340)||(513388-513489)
chr8 (188-340)||(35443392-35443545)
chr8 (239-340)||(440921-441022)
chr8 (239-340)||(38107180-38107281)
chr8 (240-340)||(2533353-2533453)
chr8 (244-340)||(35884394-35884490)
chr8 (240-336)||(41536487-41536583)
chr8 (240-339)||(4649232-4649331)
chr8 (230-340)||(24193079-24193190)
chr8 (231-340)||(1293567-1293677)
chr8 (231-340)||(38633660-38633770)
chr8 (239-340)||(3875989-3876090)
chr8 (239-340)||(22683947-22684048)
chr8 (231-340)||(15847193-15847303)
chr8 (238-340)||(38208834-38208935)
chr8 (239-340)||(13797169-13797270)
chr8 (229-340)||(9056286-9056398)
chr8 (231-340)||(33651922-33652032)
chr8 (229-340)||(12010630-12010745)
chr8 (243-340)||(28707410-28707506)
chr8 (231-336)||(40301843-40301949)
chr8 (230-340)||(24430520-24430631)
chr8 (179-298)||(22684171-22684291)
chr8 (230-315)||(8137244-8137324)
chr8 (269-340)||(39513328-39513399)
chr8 (229-298)||(29485175-29485245)
chr8 (240-298)||(35884613-35884671)
chr8 (230-298)||(23972480-23972549)
chr8 (240-300)||(9884756-9884816)
chr8 (231-298)||(28496537-28496605)
chr8 (242-298)||(42988409-42988465)
chr8 (239-298)||(28707629-28707688)
chr8 (239-298)||(37933541-37933600)
chr8 (239-298)||(38633887-38633946)
chr8 (239-297)||(259877-259935)
chr8 (229-298)||(440728-440798)
chr8 (239-297)||(655986-656044)
chr8 (239-297)||(841721-841779)
chr8 (240-298)||(13796989-13797047)
chr8 (229-298)||(23935121-23935191)
chr8 (240-298)||(35443211-35443269)
chr8 (240-330)||(42988187-42988276)
chr8 (239-295)||(8137072-8137128)
chr8 (238-298)||(24430754-24430814)
chr8 (231-298)||(38208642-38208710)
chr8 (240-299)||(39295333-39295392)
chr8 (231-298)||(40302076-40302143)
chr8 (239-297)||(6016104-6016162)
chr8 (240-294)||(15847039-15847093)
chr8 (240-298)||(43806716-43806774)
chr8 (241-298)||(12010450-12010507)
chr8 (259-340)||(36218760-36218840)
chr8 (240-300)||(9056519-9056579)
chr8 (238-294)||(39513526-39513582)
chr8 (230-277)||(1293347-1293394)
chr8 (239-298)||(2533171-2533230)
chr8 (239-298)||(4649049-4649108)
chr8 (245-300)||(41536708-41536763)
chr8 (187-274)||(3875785-3875873)
chr8 (240-297)||(38107000-38107056)
chr8 (183-215)||(9056663-9056695)
chr8 (239-298)||(1293385-1293444)
chr8 (240-275)||(6016331-6016366)
chr8 (239-298)||(7434785-7434844)
chr8 (301-340)||(7434967-7435006)
chr8 (301-340)||(23935314-23935353)
chr8 (229-275)||(23935359-23935406)
chr8 (239-298)||(24193466-24193525)
chr8 (301-340)||(29485367-29485406)
chr8 (240-295)||(36218966-36219021)
chr8 (229-290)||(21356654-21356716)
chr8 (229-298)||(33651729-33651799)
chr8 (229-273)||(35443169-35443214)
chr8 (181-214)||(36341986-36342019)
chr8 (239-295)||(513207-513263)
chr8 (183-215)||(8137338-8137370)
chr8 (187-215)||(35884336-35884364)
chr8 (230-277)||(38633937-38633985)
[»] chr4 (121 HSPs)
chr4 (229-340)||(17847044-17847156)
chr4 (183-336)||(28812189-28812343)
chr4 (229-340)||(33807729-33807840)
chr4 (239-340)||(25730321-25730422)
chr4 (231-340)||(37381927-37382036)
chr4 (188-340)||(5227471-5227624)
chr4 (188-340)||(28264724-28264877)
chr4 (239-340)||(19496061-19496162)
chr4 (239-340)||(42273883-42273984)
chr4 (239-340)||(55517144-55517245)
chr4 (229-340)||(22298599-22298711)
chr4 (229-340)||(50276086-50276198)
chr4 (230-340)||(11795103-11795214)
chr4 (230-340)||(15985091-15985202)
chr4 (230-340)||(48551713-48551824)
chr4 (231-340)||(30466953-30467063)
chr4 (188-340)||(33173927-33174080)
chr4 (239-340)||(9339082-9339183)
chr4 (239-340)||(26017504-26017605)
chr4 (239-340)||(31591156-31591257)
chr4 (239-340)||(49118692-49118793)
chr4 (244-340)||(24458595-24458691)
chr4 (229-340)||(48149580-48149692)
chr4 (187-340)||(23553145-23553299)
chr4 (230-340)||(50542303-50542414)
chr4 (239-340)||(4544944-4545045)
chr4 (239-340)||(12196550-12196651)
chr4 (239-340)||(20534246-20534347)
chr4 (239-340)||(23134965-23135066)
chr4 (239-340)||(31973672-31973773)
chr4 (239-340)||(32118795-32118896)
chr4 (239-340)||(44490400-44490501)
chr4 (239-340)||(48707692-48707793)
chr4 (240-340)||(31208825-31208925)
chr4 (230-340)||(10588661-10588772)
chr4 (230-340)||(35930120-35930231)
chr4 (231-340)||(8881963-8882073)
chr4 (229-340)||(39995115-39995227)
chr4 (231-340)||(28159903-28160013)
chr4 (231-340)||(40988714-40988820)
chr4 (238-340)||(14564877-14564979)
chr4 (231-340)||(30141058-30141168)
chr4 (231-340)||(33693283-33693393)
chr4 (238-340)||(32318034-32318135)
chr4 (246-336)||(51371013-51371103)
chr4 (231-340)||(25734174-25734283)
chr4 (240-340)||(2055359-2055459)
chr4 (265-340)||(17993002-17993077)
chr4 (229-298)||(14564684-14564754)
chr4 (229-298)||(35929928-35929998)
chr4 (229-298)||(48551929-48551999)
chr4 (230-298)||(42549804-42549873)
chr4 (229-300)||(25734404-25734476)
chr4 (239-298)||(12196377-12196436)
chr4 (239-298)||(19496328-19496387)
chr4 (239-298)||(28812469-28812528)
chr4 (240-298)||(24458814-24458872)
chr4 (183-298)||(26017265-26017381)
chr4 (239-295)||(9339312-9339368)
chr4 (188-298)||(19168978-19169089)
chr4 (239-295)||(28160139-28160195)
chr4 (239-295)||(44490109-44490165)
chr4 (239-295)||(49118510-49118566)
chr4 (239-298)||(8882196-8882255)
chr4 (239-298)||(15984909-15984968)
chr4 (239-298)||(17993200-17993259)
chr4 (239-298)||(31208647-31208706)
chr4 (239-298)||(33174203-33174262)
chr4 (239-298)||(42273699-42273758)
chr4 (240-298)||(10588480-10588538)
chr4 (239-297)||(32118613-32118671)
chr4 (231-340)||(39700126-39700231)
chr4 (238-295)||(23552960-23553017)
chr4 (239-296)||(25730139-25730196)
chr4 (239-300)||(48707914-48707975)
chr4 (230-298)||(50276318-50276387)
chr4 (238-298)||(28264541-28264601)
chr4 (239-298)||(11795337-11795396)
chr4 (239-298)||(17847278-17847337)
chr4 (239-298)||(23135189-23135248)
chr4 (239-298)||(31617618-31617677)
chr4 (239-298)||(39995350-39995409)
chr4 (240-315)||(56555125-56555200)
chr4 (239-300)||(56555324-56555385)
chr4 (239-295)||(37381745-37381801)
chr4 (243-298)||(2055181-2055236)
chr4 (301-340)||(19168816-19168855)
chr4 (301-340)||(24623229-24623268)
chr4 (239-298)||(30467190-30467249)
chr4 (239-298)||(48149398-48149457)
chr4 (240-298)||(40988533-40988591)
chr4 (239-300)||(4545166-4545227)
chr4 (229-277)||(11795387-11795436)
chr4 (257-298)||(19496297-19496338)
chr4 (230-298)||(33452358-33452427)
chr4 (254-295)||(44490233-44490274)
chr4 (239-295)||(22298418-22298473)
chr4 (179-215)||(25734519-25734555)
chr4 (184-215)||(24622991-24623022)
chr4 (239-298)||(33807963-33808022)
chr4 (184-215)||(39995069-39995100)
chr4 (242-297)||(51371262-51371317)
chr4 (260-298)||(8433830-8433868)
chr4 (185-215)||(9339422-9339452)
chr4 (178-215)||(17847420-17847458)
chr4 (230-275)||(19168764-19168810)
chr4 (239-277)||(44490080-44490118)
chr4 (186-215)||(11795058-11795087)
chr4 (182-215)||(19496442-19496475)
chr4 (229-277)||(20534338-20534387)
chr4 (182-215)||(22298331-22298364)
chr4 (231-275)||(24623274-24623319)
chr4 (186-215)||(31208564-31208593)
chr4 (238-298)||(31617649-31617707)
chr4 (229-277)||(32118573-32118622)
chr4 (238-298)||(33693516-33693577)
chr4 (239-300)||(50542535-50542596)
chr4 (229-277)||(50542587-50542636)
chr4 (187-215)||(24458537-24458565)
chr4 (187-215)||(32118911-32118939)
chr4 (257-297)||(51371231-51371271)
[»] chr1 (141 HSPs)
chr1 (229-340)||(12143153-12143264)
chr1 (230-340)||(19315721-19315832)
chr1 (240-340)||(7552976-7553076)
chr1 (229-340)||(38473574-38473686)
chr1 (231-340)||(23767365-23767474)
chr1 (231-340)||(36781122-36781232)
chr1 (188-340)||(46051531-46051684)
chr1 (239-340)||(26549469-26549570)
chr1 (239-340)||(46825612-46825713)
chr1 (239-340)||(49094670-49094771)
chr1 (239-340)||(50690024-50690125)
chr1 (229-340)||(5400951-5401063)
chr1 (229-340)||(33325808-33325920)
chr1 (229-340)||(36157626-36157737)
chr1 (187-340)||(7651743-7651897)
chr1 (231-340)||(21929607-21929717)
chr1 (188-340)||(28425270-28425423)
chr1 (238-340)||(33674098-33674200)
chr1 (229-338)||(44978716-44978826)
chr1 (180-340)||(48802230-48802391)
chr1 (242-340)||(49814381-49814479)
chr1 (238-339)||(24204429-24204530)
chr1 (240-340)||(52067611-52067711)
chr1 (230-340)||(9962832-9962943)
chr1 (241-340)||(19274640-19274739)
chr1 (231-340)||(18892410-18892519)
chr1 (239-340)||(25988230-25988331)
chr1 (239-340)||(26069973-26070074)
chr1 (239-340)||(37216977-37217078)
chr1 (239-340)||(40721424-40721525)
chr1 (229-340)||(9878732-9878844)
chr1 (229-336)||(18917609-18917717)
chr1 (240-340)||(23228154-23228254)
chr1 (230-340)||(7608716-7608826)
chr1 (231-340)||(16705951-16706061)
chr1 (239-340)||(6711521-6711622)
chr1 (239-340)||(21965146-21965247)
chr1 (239-340)||(25800723-25800823)
chr1 (239-340)||(43396756-43396857)
chr1 (229-340)||(45670434-45670547)
chr1 (239-340)||(46095034-46095135)
chr1 (229-340)||(52147074-52147186)
chr1 (230-340)||(18782038-18782149)
chr1 (257-340)||(48669373-48669456)
chr1 (239-340)||(45350676-45350775)
chr1 (258-340)||(50533464-50533546)
chr1 (240-340)||(41982195-41982295)
chr1 (269-340)||(41106097-41106168)
chr1 (230-300)||(48319227-48319297)
chr1 (243-340)||(8141450-8141546)
chr1 (230-340)||(33714310-33714421)
chr1 (265-340)||(52349909-52349984)
chr1 (231-300)||(45670667-45670737)
chr1 (239-300)||(50099119-50099180)
chr1 (229-300)||(33325615-33325687)
chr1 (239-298)||(18782272-18782331)
chr1 (239-298)||(24204654-24204712)
chr1 (238-297)||(37216794-37216853)
chr1 (231-340)||(17983848-17983958)
chr1 (240-298)||(18892229-18892287)
chr1 (229-298)||(19315528-19315598)
chr1 (185-293)||(22351029-22351138)
chr1 (240-298)||(25988454-25988512)
chr1 (229-298)||(40721239-40721309)
chr1 (239-300)||(43396574-43396635)
chr1 (239-300)||(50533282-50533343)
chr1 (238-298)||(7651558-7651618)
chr1 (240-300)||(41982417-41982477)
chr1 (239-298)||(23767597-23767656)
chr1 (183-300)||(52146835-52146953)
chr1 (239-298)||(52350107-52350166)
chr1 (240-298)||(9974742-9974800)
chr1 (239-297)||(12964545-12964603)
chr1 (240-298)||(28425546-28425604)
chr1 (240-298)||(46095258-46095316)
chr1 (239-300)||(38473807-38473868)
chr1 (239-300)||(44979369-44979430)
chr1 (240-297)||(49094895-49094952)
chr1 (238-298)||(9962658-9962718)
chr1 (231-298)||(36781355-36781423)
chr1 (239-298)||(5400770-5400829)
chr1 (239-298)||(7608949-7609008)
chr1 (239-298)||(8141669-8141728)
chr1 (239-298)||(9878967-9879026)
chr1 (242-293)||(16505199-16505250)
chr1 (239-298)||(17989950-17990009)
chr1 (239-298)||(26069791-26069850)
chr1 (239-298)||(32373736-32373795)
chr1 (239-298)||(46825399-46825458)
chr1 (243-298)||(49973845-49973900)
chr1 (242-300)||(6711342-6711400)
chr1 (229-298)||(7553199-7553269)
chr1 (238-292)||(12142963-12143017)
chr1 (229-298)||(16705758-16705828)
chr1 (240-298)||(23228377-23228435)
chr1 (229-298)||(33673905-33673975)
chr1 (239-288)||(25800542-25800591)
chr1 (239-300)||(52067835-52067896)
chr1 (300-340)||(9974923-9974963)
chr1 (242-298)||(34970982-34971038)
chr1 (240-303)||(12964750-12964813)
chr1 (301-340)||(16506809-16506848)
chr1 (188-293)||(16508117-16508222)
chr1 (247-298)||(18917431-18917482)
chr1 (301-340)||(30281712-30281751)
chr1 (273-340)||(34971161-34971228)
chr1 (239-298)||(48669579-48669638)
chr1 (239-298)||(50689843-50689901)
chr1 (239-297)||(26549287-26549345)
chr1 (240-298)||(45350897-45350955)
chr1 (229-298)||(46051338-46051408)
chr1 (257-298)||(46825448-46825489)
chr1 (239-284)||(49973971-49974016)
chr1 (229-277)||(8141719-8141767)
chr1 (179-215)||(18782385-18782421)
chr1 (178-214)||(21929330-21929366)
chr1 (239-279)||(24036660-24036700)
chr1 (238-277)||(12964515-12964554)
chr1 (239-298)||(19274458-19274517)
chr1 (230-298)||(21964953-21965023)
chr1 (184-215)||(24204766-24204797)
chr1 (301-340)||(33194672-33194711)
chr1 (184-215)||(41105830-41105861)
chr1 (301-340)||(48319067-48319106)
chr1 (239-298)||(49814199-49814258)
chr1 (177-277)||(25800450-25800551)
chr1 (239-273)||(25988509-25988543)
chr1 (230-271)||(52067893-52067935)
chr1 (240-297)||(21929421-21929478)
chr1 (240-297)||(33714543-33714600)
chr1 (240-273)||(45350952-45350985)
chr1 (229-277)||(50099079-50099128)
chr1 (229-277)||(50533242-50533291)
chr1 (239-271)||(17990006-17990038)
chr1 (187-215)||(18781995-18782023)
chr1 (179-215)||(18917334-18917370)
chr1 (187-215)||(19274376-19274404)
chr1 (230-277)||(23228427-23228475)
chr1 (183-215)||(26549201-26549233)
chr1 (183-215)||(37217103-37217135)
chr1 (230-277)||(38473859-38473907)
[»] chr3 (118 HSPs)
chr3 (231-340)||(35346421-35346531)
chr3 (239-340)||(20760030-20760131)
chr3 (239-340)||(27070698-27070799)
chr3 (229-340)||(20813389-20813501)
chr3 (229-340)||(41250967-41251079)
chr3 (188-340)||(21656599-21656752)
chr3 (231-340)||(26455663-26455773)
chr3 (231-340)||(40922115-40922225)
chr3 (239-340)||(31122743-31122844)
chr3 (229-340)||(21564577-21564689)
chr3 (230-340)||(20086263-20086374)
chr3 (231-340)||(47329125-47329235)
chr3 (239-340)||(1687732-1687833)
chr3 (231-340)||(42016954-42017063)
chr3 (239-340)||(55164074-55164175)
chr3 (229-340)||(44798348-44798460)
chr3 (239-338)||(33151779-33151878)
chr3 (231-340)||(37248037-37248147)
chr3 (239-340)||(1017125-1017226)
chr3 (239-340)||(42107058-42107159)
chr3 (229-340)||(38446557-38446669)
chr3 (239-340)||(21890251-21890352)
chr3 (239-340)||(50287647-50287748)
chr3 (229-340)||(20913702-20913814)
chr3 (229-340)||(20921820-20921932)
chr3 (182-340)||(29677557-29677716)
chr3 (240-340)||(35608091-35608191)
chr3 (240-340)||(48651329-48651429)
chr3 (231-340)||(19664622-19664731)
chr3 (240-340)||(10618440-10618540)
chr3 (231-338)||(38923948-38924056)
chr3 (240-335)||(33473199-33473294)
chr3 (239-340)||(22852077-22852178)
chr3 (231-340)||(32650770-32650880)
chr3 (239-340)||(36314930-36315032)
chr3 (239-336)||(3697231-3697328)
chr3 (240-340)||(53925939-53926039)
chr3 (239-338)||(39069809-39069908)
chr3 (230-340)||(52820998-52821109)
chr3 (231-340)||(51562243-51562353)
chr3 (231-340)||(53196095-53196204)
chr3 (238-322)||(44152772-44152856)
chr3 (239-298)||(21890069-21890128)
chr3 (238-300)||(44152598-44152660)
chr3 (239-340)||(45380219-45380321)
chr3 (239-300)||(39069626-39069687)
chr3 (237-298)||(42016770-42016831)
chr3 (239-340)||(1448694-1448792)
chr3 (239-298)||(12748290-12748349)
chr3 (237-300)||(38446373-38446436)
chr3 (239-298)||(50365070-50365129)
chr3 (240-298)||(52821244-52821302)
chr3 (239-300)||(19664440-19664501)
chr3 (239-300)||(45380441-45380502)
chr3 (288-340)||(12748472-12748524)
chr3 (240-300)||(41250786-41250846)
chr3 (231-298)||(50977754-50977822)
chr3 (231-298)||(51080886-51080954)
chr3 (239-298)||(1448915-1448974)
chr3 (240-298)||(19268421-19268479)
chr3 (240-298)||(33473422-33473480)
chr3 (240-298)||(37247856-37247914)
chr3 (229-298)||(51475431-51475501)
chr3 (240-298)||(53195914-53195972)
chr3 (188-295)||(1016891-1016999)
chr3 (179-298)||(21564334-21564454)
chr3 (239-300)||(35346646-35346707)
chr3 (237-298)||(47329358-47329419)
chr3 (239-300)||(47473129-47473190)
chr3 (239-300)||(55164296-55164357)
chr3 (188-298)||(1687498-1687609)
chr3 (231-298)||(10618663-10618731)
chr3 (239-295)||(20760257-20760313)
chr3 (240-300)||(20813622-20813682)
chr3 (229-296)||(28699573-28699641)
chr3 (229-340)||(19268602-19268720)
chr3 (239-298)||(20086497-20086556)
chr3 (239-298)||(50287465-50287524)
chr3 (238-300)||(3697044-3697106)
chr3 (240-298)||(27070922-27070980)
chr3 (229-291)||(28775426-28775487)
chr3 (240-298)||(36315155-36315213)
chr3 (240-294)||(51562062-51562116)
chr3 (239-300)||(26455481-26455542)
chr3 (179-215)||(20914051-20914087)
chr3 (179-215)||(20922169-20922205)
chr3 (240-300)||(31122562-31122622)
chr3 (231-275)||(34019586-34019630)
chr3 (238-298)||(42107282-42107342)
chr3 (239-298)||(20913937-20913996)
chr3 (239-298)||(20922055-20922114)
chr3 (229-275)||(51475214-51475261)
chr3 (301-340)||(51475267-51475306)
chr3 (240-298)||(21656418-21656476)
chr3 (239-300)||(22851895-22851956)
chr3 (239-300)||(35608312-35608372)
chr3 (239-300)||(40922346-40922407)
chr3 (183-215)||(1448999-1449031)
chr3 (178-214)||(20813738-20813774)
chr3 (230-277)||(32651053-32651101)
chr3 (238-298)||(42641335-42641395)
chr3 (229-272)||(50364855-50364899)
chr3 (188-277)||(33151869-33151959)
chr3 (243-298)||(48651151-48651206)
chr3 (301-340)||(50364908-50364947)
chr3 (301-340)||(50977945-50977984)
chr3 (301-340)||(51081077-51081116)
chr3 (185-215)||(19229257-19229287)
chr3 (239-297)||(32651004-32651062)
chr3 (182-215)||(20760367-20760400)
chr3 (229-295)||(53926165-53926233)
chr3 (179-215)||(1687858-1687894)
chr3 (187-215)||(10618387-10618415)
chr3 (230-277)||(19268381-19268429)
chr3 (230-277)||(19664401-19664449)
chr3 (239-275)||(50977990-50978026)
chr3 (239-275)||(51081122-51081158)
chr3 (230-277)||(51562022-51562070)
[»] scaffold0693 (3 HSPs)
scaffold0693 (229-340)||(4975-5087)
scaffold0693 (240-298)||(5210-5268)
scaffold0693 (229-277)||(5260-5309)
[»] scaffold0727 (2 HSPs)
scaffold0727 (187-340)||(5266-5420)
scaffold0727 (238-295)||(5081-5138)
[»] scaffold0184 (3 HSPs)
scaffold0184 (231-340)||(13176-13286)
scaffold0184 (240-298)||(12995-13053)
scaffold0184 (230-277)||(12955-13003)
[»] scaffold0078 (3 HSPs)
scaffold0078 (231-340)||(59558-59668)
scaffold0078 (240-298)||(59791-59849)
scaffold0078 (230-277)||(59841-59889)
[»] scaffold0004 (2 HSPs)
scaffold0004 (231-340)||(218967-219077)
scaffold0004 (230-300)||(218774-218845)
[»] scaffold0005 (2 HSPs)
scaffold0005 (238-340)||(252396-252498)
scaffold0005 (229-298)||(252621-252691)
[»] scaffold1562 (2 HSPs)
scaffold1562 (239-340)||(620-721)
scaffold1562 (229-277)||(712-761)
[»] scaffold1158 (2 HSPs)
scaffold1158 (239-340)||(1872-1973)
scaffold1158 (229-277)||(1832-1881)
[»] scaffold0717 (1 HSPs)
scaffold0717 (239-340)||(1898-1999)
[»] scaffold0096 (2 HSPs)
scaffold0096 (231-340)||(48043-48153)
scaffold0096 (239-297)||(47861-47919)
[»] scaffold0952 (1 HSPs)
scaffold0952 (239-340)||(3331-3431)
[»] scaffold1986 (2 HSPs)
scaffold1986 (265-340)||(195-270)
scaffold1986 (239-298)||(13-72)
[»] scaffold0122 (2 HSPs)
scaffold0122 (239-298)||(11264-11323)
scaffold0122 (265-338)||(11441-11514)
[»] scaffold0392 (1 HSPs)
scaffold0392 (231-295)||(387-451)
[»] scaffold0542 (2 HSPs)
scaffold0542 (231-297)||(2157-2224)
scaffold0542 (301-340)||(1994-2033)
[»] scaffold0338 (1 HSPs)
scaffold0338 (184-293)||(5728-5838)
[»] scaffold0117 (1 HSPs)
scaffold0117 (239-297)||(14548-14606)
[»] scaffold0031 (1 HSPs)
scaffold0031 (183-215)||(101297-101329)


Alignment Details
Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 26478831 - 26479000
Alignment:
Q  18 gatggagatttctcaccttacaagtcgattttatagagttgacttatgtctaatccaaattttaagaataacaagatgataaaatataattagatgtttg 117  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26478831 gatggagatttctcaccttacaagtcgatttta--gagttgacttatgtctaacccaaattttaagaataacaagatgataaaatataattagatgtttg 26478928  T
Q  118 aataaaacttaattatactttgtt-nnnnnnnctt-atttatactaatttacaatgagttccttttattttt 187  Q
    ||||||||||| ||||||||||||        ||| |||||||||||||||||||||||||| |||||||||    
T  26478929 aataaaacttatttatactttgttaaataaagcttaatttatactaatttacaatgagttccatttattttt 26479000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 2598007 - 2598159
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtt 287  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||    
T  2598007 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtctttaagttttaaaggtctcaaacaagtccttttagtttttgaatcgtt 2598106  T
Q  288 tcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||||||||||| |||| |||||||||||||  |||||||||    
T  2598107 tcaaacaagtcatattgtagatatcatagttggtaattgctttattgaactca 2598159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 183 - 339
Target Start/End: Complemental strand, 2707698 - 2707541
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaa 281  Q
    |||||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |    
T  2707698 tttttggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtccttttagtttttga 2707599  T
Q  282 attgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    || |||||||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  2707598 atcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaactc 2707541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 29050465 - 29050353
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  29050465 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 29050366  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  29050365 ttccttgaactca 29050353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 30379210 - 30379098
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  30379210 ccaaagtggtcatttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 30379111  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  30379110 ttccttgaactca 30379098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 1077428 - 1077318
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| |||||||||||||    
T  1077428 aaagtggtcatttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaataagtcatgttgtagatagcatagttggtaattgctt 1077329  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  1077328 ccttgaactca 1077318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 6503900 - 6503802
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  6503900 ctttaagtttcaaaagtctcaaacaagtccttttagtttttaaatcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttccttgaac 6503802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 3408371 - 3408270
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  3408371 ctttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcatattgtagatagtatagttggtaattgcttccttgaact 3408272  T
Q  339 ca 340  Q
    ||    
T  3408271 ca 3408270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 338
Target Start/End: Complemental strand, 12626870 - 12626719
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  12626870 ggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 12626771  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  12626770 ttcaaacaagtcctattgtagatagaatagttggtaattgcttccttgaact 12626719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 17943272 - 17943117
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaatt 284  Q
    ||||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| |||     
T  17943272 ttggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatc 17943173  T
Q  285 gtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  17943172 gtttcaaacaagtcctaatgtagatagcataattggtaattgcttccttaaactca 17943117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 239 - 338
Target Start/End: Complemental strand, 31376099 - 31376000
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  31376099 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttgttaattgcttccttgaact 31376000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 10256428 - 10256318
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||| |||| |||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  10256428 aaagtggtcctttaagtttcaaaagtctcaaacaagtcattttcgtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctt 10256329  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  10256328 ccttgaactca 10256318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 1915302 - 1915403
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||| || ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  1915302 ctttaagtttccaaagtcccaaacaagtccttttagtttttgaatagtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 1915401  T
Q  339 ca 340  Q
    ||    
T  1915402 ca 1915403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 26392958 - 26393069
Alignment:
Q  230 caaagtggtctt-taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||| || |  |||||||||||||||| ||||||||||||    
T  26392958 caaagtggtcctctaagtttcaaaggtctcaaacaagtccttttagtttttgaatcgtttcaaaaaacttctattgtagatagcatagttggtaattgct 26393057  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  26393058 tccttgaactca 26393069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 2390448 - 2390346
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||| ||| ||||||| |||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  2390448 tctttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaac 2390349  T
Q  338 tca 340  Q
    |||    
T  2390348 tca 2390346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 8178208 - 8178309
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||| ||| ||| |||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  8178208 ctttaagttttaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacatgtcctattgtagatagcatagttggtaattgcttccttgaact 8178307  T
Q  339 ca 340  Q
    ||    
T  8178308 ca 8178309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 9382754 - 9382600
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattg 285  Q
    |||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||  |||||||||||||||||||||| ||| |    
T  9382754 tggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcg 9382655  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||| |  |||||||| |||| ||||||||||||||||||||||||    
T  9382654 tttcaaacaagtcctgatgtagataacatagttggtaattgcttccttgaactca 9382600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 12612930 - 12613029
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||| ||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  12612930 ctttaaatttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 12613029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 17428222 - 17428332
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||| ||||||| ||  |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||    
T  17428222 aaagtggtcctttaaatttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgctt 17428321  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  17428322 ccttgaactca 17428332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 12612798 - 12612908
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||| | || ||| ||||||    
T  12612798 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtcctattgtagatagcaaagttagtacttgctt 12612897  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  12612898 cattgaactca 12612908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 3258755 - 3258868
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata-attggtaattg 326  Q
    ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||  ||||||||||| ||||  ||||||||||    
T  3258755 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagttctattgtagataccatagtttggtaattg 3258854  T
Q  327 cttccttgaactca 340  Q
    ||||||||||||||    
T  3258855 cttccttgaactca 3258868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 6785050 - 6785158
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| |||| |||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| || |||||||| |||||||||   |||||    
T  6785050 caaagtggtcctttatgtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtcctaatgtagataacataattgg---ttgct 6785146  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  6785147 tccttgaactca 6785158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 16193492 - 16193391
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||  || || |||||  ||| ||||||||||||||||||||||    
T  16193492 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagttctaatgcagataaaatagttggtaattgcttccttgaact 16193393  T
Q  339 ca 340  Q
    ||    
T  16193392 ca 16193391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 25820508 - 25820609
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||| ||||| ||||| ||| ||||||||||| || ||| |||||||||||| |||||||||||||| |||||||    
T  25820508 ctttaagtttcaaaagtcccaaacaagtcattttaattttttaatcgtttcaaacaattcctatcgtagatagcatagttggtaattgcttcattgaact 25820607  T
Q  339 ca 340  Q
    ||    
T  25820608 ca 25820609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 229 - 333
Target Start/End: Complemental strand, 11134068 - 11133962
Alignment:
Q  229 ccaaagtggtc--tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattg 326  Q
    |||||||||||  ||||||||||||| |||  ||| ||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||  |||||||||    
T  11134068 ccaaagtggtccttttaagtttcaaaagtcctaaataagtccttttagtttttgaatcgtttcaaacaagtcctatcgtagatagcatagatggtaattg 11133969  T
Q  327 cttcctt 333  Q
    |||||||    
T  11133968 cttcctt 11133962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 26230882 - 26230992
Alignment:
Q  230 caaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||| |||||||||||||| ||| ||||||||||| || ||||||||||| ||| |||||||||||||| || |||| ||| |||| |||||| || |||    
T  26230882 caaaatggtctttaagttttaaaagtctcaaacaaatcattttagtttttgaatcgtttcaaacaagtcctaatgtaaataacatagttggtagtttctt 26230981  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  26230982 ccttgaactca 26230992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 26196281 - 26196382
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata-attggtaattgcttccttgaact 338  Q
    ||||||||||||| ||||||||||| || ||||||||||| ||| | ||||| |||||| ||||||||||| ||||  ||||||||||||||| ||||||    
T  26196281 tttaagtttcaaaagtctcaaacaaatcattttagtttttgaatcggttcaaccaagtcctattgtagataacatagtttggtaattgcttccgtgaact 26196380  T
Q  339 ca 340  Q
    ||    
T  26196381 ca 26196382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 3259049 - 3258990
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  3259049 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 3258990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 26393251 - 26393192
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  26393251 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 26393192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 17942937 - 17942993
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  17942937 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 17942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12626535 - 12626594
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  12626535 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 12626594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 17515006 - 17515065
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  17515006 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 17515065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 29050171 - 29050230
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  29050171 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 29050230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 6785339 - 6785281
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  6785339 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 6785281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 10931402 - 10931334
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  10931402 aaagtggtcctttaagtttcaaaagtcacaaacaaatccttttagtttttgaatcgtttcaaacaagtc 10931334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 17428513 - 17428453
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| |||||||||||||  ||||||||||| ||| ||||||||||||||||    
T  17428513 tttaagtttcaaaagtctcaaacaagtatttttagtttttgaatcgtttcaaacaagtcat 17428453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 26936506 - 26936562
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||    
T  26936506 ctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaa 26936562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2390164 - 2390223
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||  |||||||||||||    
T  2390164 ctttaagtttcaaaagtctcaaacacgtccttttagtttttgaatcatttcaaacaagtc 2390223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2707358 - 2707417
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| |||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  2707358 ctttaagttccaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 2707417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 6503617 - 6503676
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| || ||||||||||| ||||||||||| ||| ||||||||||||||    
T  6503617 ctttaagtttcaaaagtttcaaacaagtctttttagtttttgaatcgtttcaaacaagtc 6503676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 9382416 - 9382475
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||| ||||||||||||| ||| ||||||||||||||    
T  9382416 ctttaagtttcaaaagtcccaaacaagcccttttagtttttgaatcgtttcaaacaagtc 9382475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 3408089 - 3408147
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  3408089 tttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtc 3408147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 10931098 - 10931207
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||  ||||||| | |||||||||||| ||| || ||||||||||| || ||| ||||||||| || ||||||| ||    
T  10931098 aaagtggtcctttaagtttcaaaagttccaaacaaatacttttagtttttgaatcgtatcaaacaagtcctaatgtggatagcatagtt-gtaattgttt 10931196  T
Q  330 ccttgaactca 340  Q
     ||||||||||    
T  10931197 tcttgaactca 10931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 16193210 - 16193268
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  || |||||||||||||||||||||| ||| ||||||||||||||    
T  16193210 tttaagtttcaaaattcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 16193268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 8178490 - 8178433
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||  |||||||||||||||||||| |||| ||| |||||||||||||    
T  8178490 tttaagtttcaaaaatctcaaacaagtccttttaggttttgaatcgtttcaaacaagt 8178433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 26231170 - 26231113
Alignment:
Q  243 aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||  ||||||||||||||||||||||||| |||  |||||||||||||||    
T  26231170 aagtttcaaaattctcaaacaagtccttttagtttttgaatcctttcaaacaagtcat 26231113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 35223919 - 35223959
Alignment:
Q  300 tattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  35223919 tattgtagatagcatagttggtaattgcttccttgaactca 35223959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 1915585 - 1915526
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| || ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  1915585 ctttaagtttccaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtc 1915526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 11133775 - 11133833
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||| ||| |||| ||||||||||| ||||| ||| ||||||||||||||||    
T  11133775 taagtttcaaaagtcccaaataagtccttttaattttttaatcgtttcaaacaagtcat 11133833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 3408440 - 3408400
Alignment:
Q  172 agttccttttatttttggtcaaatgcatctaaaggtccttt 212  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  3408440 agttgcttttatttttggtcaaatgcatttaaaggtccttt 3408400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 30378915 - 30378975
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||  ||| ||||||||||||||||  |||| ||| ||||||||||||||    
T  30378915 tctttaagtttcaacagtcccaaacaagtccttttaaattttgaatcgtttcaaacaagtc 30378975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 35224122 - 35224082
Alignment:
Q  258 caaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  35224122 caaacaaatccttttagtttttaaatcgtttcaaacaagtc 35224082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 26196563 - 26196504
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| ||||||| ||| ||||||||||||||||  |||| ||| ||||||||||||||    
T  26196563 ctttaactttcaaaagtcccaaacaagtccttttaagttttgaatcgtttcaaacaagtc 26196504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Complemental strand, 8178567 - 8178538
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||    
T  8178567 ttggtcaaatgcatctaaaggtcctttaag 8178538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 12613063 - 12613026
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtt 276  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  12613063 ctttaagtttcaaaagtctcaaacaagtcattttagtt 12613026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 12626495 - 12626544
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  12626495 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 12626544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 17942897 - 17942946
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  17942897 ccaaagtggtcatttaagtttcaaaagtcccaaacaagtcctttaagttt 17942946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Complemental strand, 30457549 - 30457520
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||    
T  30457549 ttggtcaaatgcatctaaaggtcctttaag 30457520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 6503588 - 6503645
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||| |||||  |||  ||||||||||||||    
T  6503588 ctttaagtttcaaaagtcccaaacaagtcctttaagtttcaaaa--gtttcaaacaagtc 6503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 6785379 - 6785331
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  6785379 caaagtggtcctttaagtttcaaaagtctcaaacaagtcttttaagttt 6785331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 30378830 - 30378862
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| |||||||||||||||||||||||||||    
T  30378830 ttttttgtcaaatgcatctaaaggtcctttaag 30378862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 35224162 - 35224130
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttt 271  Q
    |||||||||||||| ||||||||||||||||||    
T  35224162 ctttaagtttcaaaagtctcaaacaagtccttt 35224130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 99)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 11476454 - 11476616
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||| ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  11476454 tttattttaggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagttt 11476553  T
Q  278 ttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    || ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11476554 ttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 11476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 8162662 - 8162772
Alignment:
Q  230 caaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  8162662 caaagtggtctttaagtttcaaaagtctcaaacaagttattttagtttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgctt 8162761  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  8162762 ccttgaactca 8162772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 35600071 - 35600182
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  35600071 caaagtggtcctttaagtttcaaaagtctcaaataagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgct 35600170  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  35600171 tccttgaactca 35600182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 1469443 - 1469553
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  1469443 aaagtggtcctttaagtttcaaaggtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctt 1469542  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  1469543 ccttgaactca 1469553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 43752735 - 43752836
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43752735 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaact 43752834  T
Q  339 ca 340  Q
    ||    
T  43752835 ca 43752836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 23842486 - 23842386
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  23842486 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactc 23842387  T
Q  340 a 340  Q
    |    
T  23842386 a 23842386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 31684041 - 31684194
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  31684041 ggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 31684140  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  31684141 ttcaaacaagtcctattgtagatagaatagttggtaattgcttccttgaactca 31684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 43968209 - 43968319
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| || |||||||||||||    
T  43968209 aaagtggtcatttaagtttcaaaggtcacaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcgtagttggtaattgctt 43968308  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  43968309 ccttgaactca 43968319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 48629039 - 48628886
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  48629039 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgt 48628940  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  48628939 ttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactca 48628886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 30798319 - 30798428
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| || ||| ||||||||||| || |||||||||||||||| ||||||||||||||    
T  30798319 aaagtggtctttaagtttcaaaagtcccaaacaagtccttttagttgttgaatcgtttcaaacaaatcctattgtagatagcatagttggtaattgcttc 30798418  T
Q  331 cttgaactca 340  Q
    ||||||||||    
T  30798419 cttgaactca 30798428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 33884509 - 33884400
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    |||||| ||||||||||| ||| || |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33884509 aaagtgatctttaagttttaaaagtttcaaccaagtccttttcgtttttaaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttc 33884410  T
Q  331 cttgaactca 340  Q
    ||||||||||    
T  33884409 cttgaactca 33884400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 44544591 - 44544490
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||| || ||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  44544591 ctttaagtttctaaagtcccaaacaagtccttttagtttttaaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 44544492  T
Q  339 ca 340  Q
    ||    
T  44544491 ca 44544490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 47219327 - 47219226
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  47219327 ctttaagtttcaaaagtcccaaacaagtcattttagtttttaaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 47219228  T
Q  339 ca 340  Q
    ||    
T  47219227 ca 47219226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 37393946 - 37394058
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||| ||||    
T  37393946 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtagttgc 37394045  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  37394046 ttccttgaactca 37394058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 41113570 - 41113458
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||  ||||||||||||| |||||||||||||||| |||||||||||    
T  41113570 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcatttcaaacaagtcctattgtagatagcatagttggtaattgc 41113471  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  41113470 ttccttgaactca 41113458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 47294198 - 47294351
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  47294198 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 47294297  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  47294298 ttcaaacaagtcctattgtagatagcatcgttggtaattgcttccttgaactca 47294351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 336
Target Start/End: Original strand, 11050209 - 11050317
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  11050209 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttcagtttttgaatcgtttcaaacaagtcctattgtagatagcatatttggtaattgc 11050308  T
Q  328 ttccttgaa 336  Q
    |||||||||    
T  11050309 ttccttgaa 11050317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 30876452 - 30876340
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| |||||||||||    
T  30876452 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtgctattgtagatagcatagttggtaattgc 30876353  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  30876352 ttcattgaactca 30876340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 38427523 - 38427623
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  38427523 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattatagatagcatagttggtaattgcttccttgaactc 38427622  T
Q  340 a 340  Q
    |    
T  38427623 a 38427623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 2960589 - 2960700
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||| |    
T  2960589 caaagtggtcctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtt 2960688  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  2960689 tccttgaactca 2960700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 238 - 340
Target Start/End: Original strand, 45723449 - 45723551
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||| || |||||||    
T  45723449 tctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaaatcatattgtagatagcataattagtaattgttttcttgaac 45723548  T
Q  338 tca 340  Q
    |||    
T  45723549 tca 45723551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 47281083 - 47281184
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||| |||||| | |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  47281083 ctttaagcttcaaaagactcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataccatagttggtaattgcttccttgaact 47281182  T
Q  339 ca 340  Q
    ||    
T  47281183 ca 47281184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 221457 - 221356
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||  ||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  221457 ctttaagtttcaaaagttccaaacaaatccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaact 221358  T
Q  339 ca 340  Q
    ||    
T  221357 ca 221356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 44800358 - 44800470
Alignment:
Q  229 ccaaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    |||||||||||||| ||||||||||  |||||||||||| |||||||||||| |||||||||||||||||| | ||||||||| |||| ||||||||||     
T  44800358 ccaaagtggtcttttaagtttcaaaaatctcaaacaagttcttttagtttttgaattgtttcaaacaagtcctgttgtagataacatagttggtaattgt 44800457  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  44800458 ttcattgaactca 44800470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 47272162 - 47272062
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    |||||||||||||  ||| |||||| |||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  47272162 tttaagtttcaaaattctaaaacaaatccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactc 47272063  T
Q  340 a 340  Q
    |    
T  47272062 a 47272062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 47579036 - 47579147
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaa-ttgc 327  Q
    |||||||||| ||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||| ||||    
T  47579036 caaagtggtcctttaagtttcaaaagtc-caaacaagtcattttagtttttgaattgtttcagacaagtcctattatagatagcataattggtaatttgc 47579134  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  47579135 ttccttgaactca 47579147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 42889031 - 42888937
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttcctt 333  Q
    |||||||||||||| || ||||| ||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  42889031 ctttaagtttcaaaagtttcaaataagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcctt 42888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 5106223 - 5106127
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaa 336  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||| | || |||||||||||||||| ||||||||||||||||||||    
T  5106223 ctttaagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaac-attcttattgtagatagcatagttggtaattgcttccttgaa 5106127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 18353336 - 18353225
Alignment:
Q  231 aaagtggtctttaagtttcaaagg--tctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||||||||||||||| |  || |||||||||||||||||||||| ||| |||||||||||||| ||  |||||||||||| |||||||||| |    
T  18353336 aaagtggtctttaagtttcaaatgagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctaaggtagatagcatagttggtaattgtt 18353237  T
Q  329 tccttgaactca 340  Q
    | ||||||||||    
T  18353236 ttcttgaactca 18353225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 338
Target Start/End: Complemental strand, 40851456 - 40851357
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  | |||||||||||||||||| |||| ||| |||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||    
T  40851456 ctttaagtttcaaaaatttcaaacaagtccttttagcttttgaatcgtttcaaacaagtcctattgtaggtagaatagttggtaattgcttccttgaact 40851357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 47120175 - 47120072
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagc--ataattggtaattgcttccttgaa 336  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| ||||||||| |||  ||| ||||||||||||| ||||||    
T  47120175 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagagagcatatagttggtaattgctttcttgaa 47120076  T
Q  337 ctca 340  Q
    ||||    
T  47120075 ctca 47120072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 27364298 - 27364399
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||| ||| || |||||||| |||||||||||||| ||| ||||||||||  || ||||||||||| |||| ||||||||| ||||||||||||    
T  27364298 ctttaagttttaaaagtttcaaacaaatccttttagtttttgaatcgtttcaaacagatcctattgtagataacatagttggtaattacttccttgaact 27364397  T
Q  339 ca 340  Q
    ||    
T  27364398 ca 27364399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 42979580 - 42979519
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  42979580 ctttaagtttcaaaagtctcaaacaagtccttttagtttttaaatcgtttcaaacaagtcat 42979519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 30971918 - 30971994
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttcctt 333  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  30971918 tcaaacaagtcgttttagtttttgaatcgtttcaaacaagtcatattgtagatggcatagttggtaattacttcctt 30971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 41139368 - 41139472
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataa----ttggtaattgcttccttg 334  Q
    |||||||||||||| ||| |||||||||||||| ||||||| ||| |||||||||||||| ||||||| ||||||||     ||||||||||||||||||    
T  41139368 ctttaagtttcaaaagtcccaaacaagtccttt-agtttttgaatcgtttcaaacaagtcctattgtaaatagcatatatagttggtaattgcttccttg 41139466  T
Q  335 aactca 340  Q
    ||||||    
T  41139467 aactca 41139472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 42979299 - 42979398
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    |||||||||||||  ||| ||||||||||||||||||| | ||| |||||||||||||| || |||||||| |||| |||||||||||||| ||||||||    
T  42979299 tttaagtttcaaaattct-aaacaagtccttttagtttgtgaatcgtttcaaacaagtcctactgtagataacatagttggtaattgcttcgttgaactc 42979397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 29248531 - 29248423
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||| ||| ||||||||||| || ||||||||    |||  ||||||||||||| |||||||||||||||| ||||||||||     
T  29248531 ccaaagtggtcatttaagttttaaaagtctcaaacaaatcattttagtt----aatcatttcaaacaagtcttattgtagatagcatagttggtaattga 29248436  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  29248435 ttccttgaactca 29248423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 40520775 - 40520845
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  40520775 ccaaagtggtcctttaagtttcgaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtc 40520845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 298
Target Start/End: Original strand, 40851128 - 40851241
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaatt 284  Q
    ||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||     
T  40851128 ttggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatc 40851227  T
Q  285 gtttcaaacaagtc 298  Q
    ||||||||||||||    
T  40851228 gtttcaaacaagtc 40851241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 7336241 - 7336141
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  |  ||||||||| |||||||||||| ||| ||||||||||  || |||||||||||||||| ||| ||||||||||||||||||    
T  7336241 ctttaagtttcaaaaattccaaacaagttcttttagtttttgaatcgtttcaaacagttc-tattgtagatagcatagttgataattgcttccttgaact 7336143  T
Q  339 ca 340  Q
    ||    
T  7336142 ca 7336141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 31684428 - 31684317
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  31684428 ggtcaaatgcatctaaaggtcctttaagttttgcattttttccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 31684329  T
Q  287 ttcaaacaagtc 298  Q
    ||||||||||||    
T  31684328 ttcaaacaagtc 31684317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 2960827 - 2960768
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  2960827 ctttaagtttcaaaagtctcaaacaagtccttttagtttttcaatcgtttcaaacaagtc 2960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 44544308 - 44544367
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  44544308 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 44544367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 45233700 - 45233641
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  45233700 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 45233641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 30876149 - 30876219
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  30876149 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaagaagtcat 30876219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 35600363 - 35600305
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  35600363 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 35600305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 1469735 - 1469674
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  1469735 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 1469674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 47294590 - 47294474
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaa 281  Q
    |||||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||| ||||||||||| |    
T  47294590 tttttggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaaaagtcccaaacaagtctttttagtttttga 47294491  T
Q  282 attgtttcaaacaagtc 298  Q
    || ||||||||||||||    
T  47294490 atcgtttcaaacaagtc 47294474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 3797756 - 3797696
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||    
T  3797756 tctttaagtttcaaaagtttcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 3797696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 44551050 - 44550982
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||    
T  44551050 aaagtggtcctttaagtttcaaaagtctcaaacacgtccttttagtttttgaatcgtttcaaacaagtc 44550982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 48628703 - 48628763
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  48628703 tctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 48628763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 11476798 - 11476739
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  11476798 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 11476739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 47219044 - 47219103
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  47219044 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 47219103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 47271880 - 47271939
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  47271880 ctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtc 47271939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 43968512 - 43968442
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||||    
T  43968512 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacgagtc 43968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 221195 - 221256
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||||    
T  221195 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcat 221256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 47119880 - 47119949
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||| |||||    
T  47119880 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaataagtc 47119949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 39033962 - 39034022
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  39033962 tttaagtttcaaaagtcccaaacaaatcattttagtttttaaatcgtttcaaacaagtcat 39034022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 4923352 - 4923297
Alignment:
Q  285 gtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||    
T  4923352 gtttcaaacaagtcctattgtggatagcatagttggtaattacttccttgaactca 4923297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 11050503 - 11050444
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  11050503 ctttaagtttcaaatgtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 11050444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 18353043 - 18353102
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  18353043 ctttaagtttcaaaagtcccaaacaagttcttttagtttttgaatcgtttcaaacaagtc 18353102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 29248241 - 29248300
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| ||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  29248241 ctttaaatttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 29248300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 33884224 - 33884283
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  33884224 ctttaagtttcaaaagtaccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 33884283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 42888774 - 42888833
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  42888774 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 42888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 47281368 - 47281309
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  47281368 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 47281309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 25801468 - 25801565
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagttttt 279  Q
    |||||||||||||||||||||||||||||||||             |||||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  25801468 tttttggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtggtcctttaagtttcaaaagtcctaaacaagtccttttagttttt 25801565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 27364580 - 27364522
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  27364580 tttaagtttcaaaagtcacaaacaagtctttttagtttttgaatcgtttcaaacaagtc 27364522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 30798609 - 30798551
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||  ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  30798609 tttaagtttcaatagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 30798551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 38427803 - 38427745
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||  |||||||||||||    
T  38427803 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcatttcaaacaagtc 38427745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 44800651 - 44800598
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaac 293  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||    
T  44800651 tttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaac 44800598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 30972182 - 30972122
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| ||||||| || ||||||||||| ||| ||||||||||||||||    
T  30972182 tttaagtttcaaaagtcccaaacaaatcattttagtttttgaatcgtttcaaacaagtcat 30972122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 41107268 - 41107328
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||| ||||||| |||||||| ||||| || |||||||||||| ||||||||||||||    
T  41107268 tctttaaatttcaaaagtctcaaataagtctttatagtttttaaatcgtttcaaacaagtc 41107328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 41139655 - 41139595
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||  |||| ||||||||||||||||| ||| ||||||||||||||    
T  41139655 tctttaagtttcaaaagttccaaataagtccttttagtttttgaatcgtttcaaacaagtc 41139595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 43025014 - 43025070
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||| |||||| || ||||||||||||||||||||||| ||| ||||||||||||||    
T  43025014 taagattcaaaagtttcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 43025070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 45723732 - 45723672
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| |||| |||| |||||||||||| ||| ||||||||||||||||    
T  45723732 tttaagtttcaaaagtcccaaagaagttcttttagtttttgaatcgtttcaaacaagtcat 45723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 7335960 - 7336015
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||    
T  7335960 tttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaa 7336015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 8162953 - 8162898
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||  ||||||||||    
T  8162953 tttaagtttcaaaagttgcaaacaagtccttttagtttttaaatcttttcaaacaa 8162898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 27774228 - 27774189
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27774228 attgtagatagcatagttggtaattgcttccttgaactca 27774189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 37394239 - 37394181
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| |||| ||||||||||||||||||| ||||| ||| ||||||||||||||    
T  37394239 ctttaagtttaaaag-tctcaaacaagtccttttaatttttgaatcgtttcaaacaagtc 37394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 4923116 - 4923174
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| ||||| |||| ||||||||||| ||| ||||||||||||||    
T  4923116 tttaagtttcaaaagtcccaaactagtcattttagtttttgaatcgtttcaaacaagtc 4923174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 37354501 - 37354443
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||| |||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  37354501 tttaagttacaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtc 37354443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 23842194 - 23842263
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||||| ||   ||||||||| ||||||||||| ||| ||||||||||||||    
T  23842194 caaagtggtcctttaagtttcaaaagttcaaaacaagtcattttagtttttgaatcgtttcaaacaagtc 23842263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 40520835 - 40520876
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  40520835 tcaaacaagtccttttagcttttgaattgtttcaaacaagtc 40520876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 47271841 - 47271889
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||| |||||||||||||||| ||||||| |||||||||| |||||    
T  47271841 ccaaagtcgtctttaagtttcaaaagtctcaagcaagtcctttaagttt 47271889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 3797544 - 3797583
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  3797544 attgtagatagcatagttgataattgcttccttgaactca 3797583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 31793861 - 31793822
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttt 278  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  31793861 ctttaagtttcaaaagtcccaaacaagtccttttagtttt 31793822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 37354284 - 37354323
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  37354284 attgtagatagcatagttggtaattgcttcattgaactca 37354323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 214
Target Start/End: Complemental strand, 45233757 - 45233726
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaa 214  Q
    ||||||||||||||||||||||||||||||||    
T  45233757 tttttggtcaaatgcatctaaaggtcctttaa 45233726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 27692068 - 27692026
Alignment:
Q  235 tggtctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||||||||||| ||| |||| |||||||||||||||    
T  27692068 tggtctttaagtttcaaaagtcccaaataagtccttttagttt 27692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 18353003 - 18353052
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| |||||||||| || |||||||||||||||||| |||||    
T  18353003 ccaaagtggtcatttaagtttcgaaagtctcaaacaagtcctttaagttt 18353052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 27364621 - 27364572
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  27364621 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtcttttaagttt 27364572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 30798650 - 30798601
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  30798650 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtcttttaagttt 30798601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 37394279 - 37394230
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  37394279 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 37394230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 47579329 - 47579268
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||  || ||||||||||| || ||||||||||| ||| |||||||||| |||||    
T  47579329 ctttaagtttttaaagtctcaaacaaatcattttagtttttgaatcgtttcaaacatgtcat 47579268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 3797490 - 3797538
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggt-ctcaaacaagtccttttagt 275  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  3797490 ccaaagtggtcctttaagtttcaaaagttctcaaacaagtccttttagt 3797538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 31793900 - 31793852
Alignment:
Q  230 caaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  31793900 caaagtggtcttttaagtttcaaaagtcccaaacaagtcctttaagttt 31793852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 43025170 - 43025210
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttttt 279  Q
    |||||||||||||| ||||||||||| || |||||||||||    
T  43025170 ctttaagtttcaaaagtctcaaacaaatcgttttagttttt 43025210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 47218954 - 47218990
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  47218954 tttagtttaggtcaaatgcatctaaaggtcctttaag 47218990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 47281029 - 47281057
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  47281029 tggtcaaatgcatctaaaggtcctttaag 47281057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 97)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 1052725 - 1052614
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  1052725 caaagtggtcatttaagtttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgct 1052626  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  1052625 tccttgaactca 1052614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 11000676 - 11000788
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  11000676 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 11000775  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  11000776 ttccttgaactca 11000788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 6252206 - 6252053
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  6252206 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgt 6252107  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  6252106 ttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 6252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 27457147 - 27457257
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  27457147 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgctt 27457246  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  27457247 ccttgaactca 27457257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 26593238 - 26593338
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  26593238 tctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttctttgaac 26593337  T
Q  338 t 338  Q
    |    
T  26593338 t 26593338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 31710475 - 31710363
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||| |||||||||||    
T  31710475 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcataatgtagataacatagttggtaattgc 31710376  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  31710375 ttccttgaactca 31710363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 41282578 - 41282423
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaatt 284  Q
    ||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||| |||||||||||||||     
T  41282578 ttggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtcattttagtttttaaatc 41282479  T
Q  285 gtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
     ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41282478 atttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 41282423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 43166229 - 43166329
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  43166229 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactc 43166328  T
Q  340 a 340  Q
    |    
T  43166329 a 43166329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 6600086 - 6600196
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  6600086 aaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctt 6600185  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  6600186 ccttgaactca 6600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 30297697 - 30297809
Alignment:
Q  230 caaagtggtc--tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  30297697 caaagtggtccttttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 30297796  T
Q  328 ttccttgaactca 340  Q
    |||||| ||||||    
T  30297797 ttccttcaactca 30297809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 6739903 - 6740015
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  6739903 ccaaagtggtcctttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgc 6740002  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  6740003 ttccttgaactca 6740015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 28078353 - 28078465
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||| |||||||||||    
T  28078353 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctaatgtagatagcatagttggtaattgc 28078452  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  28078453 ttccttgaactca 28078465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 8689764 - 8689653
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||||| |||||||| |||| |||||||||| |    
T  8689764 ccaaagtggtctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcataatgtagataacatagttggtaattgat 8689665  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  8689664 tccttgaactca 8689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 20408767 - 20408614
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||| ||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  20408767 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaaatggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 20408668  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  20408667 ttcaaacaagtcctattgtagatagcatagttggtaattgcttcattgaactca 20408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 23128871 - 23128973
Alignment:
Q  239 ctttaagtttcaaaggtctcaaa-caagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    |||||||||||||| |||||||| |||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23128871 ctttaagtttcaaaagtctcaaaacaagtcattttagtttttgaatcgtttcaaacaagtcatatcgtagatagcataattggtaattgcttccttgaac 23128970  T
Q  338 tca 340  Q
    |||    
T  23128971 tca 23128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 27116049 - 27116159
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| |||  ||| ||||||||| |||||||||||||||| |||||||||||||    
T  27116049 aaagtggtcttttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcattttaaacaagtcctattgtagatagcatagttggtaattgctt 27116148  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  27116149 ccttgaactca 27116159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 38964021 - 38964174
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||||||||| |||| ||||||||| | ||| ||    
T  38964021 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacgagtctttttagtttctgaatcgt 38964120  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38964121 ttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactca 38964174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 39001985 - 39002085
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||  |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39001985 tttaagtttcaaaagttccaaataaatccttttagtttttgaattgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaactc 39002084  T
Q  340 a 340  Q
    |    
T  39002085 a 39002085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 3351951 - 3352062
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||| |||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||    
T  3351951 caaagtggtcatttaagtttcaaaagtctcgaacaagtcctttttgtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgct 3352050  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  3352051 tccttgaactca 3352062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 35342415 - 35342261
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattg 285  Q
    |||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||| |    
T  35342415 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaaaagtttcaaataagtccttttagtttttgaatcg 35342316  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||    
T  35342315 tttcaaacaagtctcattgtagatagcatagttgataattgcttccttgaactca 35342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 20079208 - 20079318
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| || |||||||| |||| |||||||||||||    
T  20079208 aaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgctt 20079307  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  20079308 ccttgaactca 20079318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 229 - 338
Target Start/End: Complemental strand, 39824749 - 39824639
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||  |||| |||||||||||    
T  39824749 ccaaagtggtcatttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcctattgtagatgacatagttggtaattgc 39824650  T
Q  328 ttccttgaact 338  Q
    |||||||||||    
T  39824649 ttccttgaact 39824639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 40075141 - 40075031
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  40075141 aaagtggtcctttaagtttcaaaagtctcaaacaaatcctttttgtttttgaattgtttcaaacaagtcctattgtagataacatagttggtaattgctt 40075042  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  40075041 cattgaactca 40075031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 42993709 - 42993599
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||  |||| ||||||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||    
T  42993709 aaagtggtcctttaagtttcaaaagttccaaagaagtccttttagtttttgaattgtttcaaacaattcctattgtagatagcatagttggtaattgctt 42993610  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  42993609 ccttgaactca 42993599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 8216082 - 8215981
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||| ||| ||| || ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  8216082 ctttaagttttaaaagtcccatacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 8215983  T
Q  339 ca 340  Q
    ||    
T  8215982 ca 8215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 8695048 - 8694947
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||  ||| |||||||    
T  8695048 ctttaaatttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtcctattgtagatagcataattgataattatttcattgaact 8694949  T
Q  339 ca 340  Q
    ||    
T  8694948 ca 8694947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 11935627 - 11935526
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||| |||||||| ||    
T  11935627 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgtttccttgatct 11935528  T
Q  339 ca 340  Q
    ||    
T  11935527 ca 11935526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 14952514 - 14952405
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    ||||||||||| || ||||||| ||||||||||||| |||||||||||| ||| |||||||||||||| | ||||||||| |||| ||||||||||||||    
T  14952514 aaagtggtcttcaaatttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcttgttgtagataacatagttggtaattgcttc 14952415  T
Q  331 cttgaactca 340  Q
    ||||||||||    
T  14952414 cttgaactca 14952405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 4015834 - 4015934
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||    
T  4015834 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaagcaagtcctattgtagataacatagttggtaattgcttccttgaactc 4015933  T
Q  340 a 340  Q
    |    
T  4015934 a 4015934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 30863433 - 30863334
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  30863433 tttaagtttcaaaagtc-caaacaagtcattttagtttttaaatcgtttcaaacaagtcataatgtagatagcatagttggtaattgcttctttgaactc 30863335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 19659408 - 19659561
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||| ||||||||||| ||| ||    
T  19659408 ggtcaaatgcatctaaaggtcctttaagttttttatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgt 19659507  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||| ||||| |||||||||||||||| |||||||||||||  |||||||||    
T  19659508 ttcaaataagtcctattgtagatagcatagttggtaattgcttttttgaactca 19659561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 16095919 - 16096020
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||  ||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  16095919 ctttaagtttcaaaagtcccaaacaaacccttttaatttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 16096018  T
Q  339 ca 340  Q
    ||    
T  16096019 ca 16096020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 30208362 - 30208462
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||  ||||||||||| |||| |||||||||||||||||||||||    
T  30208362 tttaagtttcaaaagtctcaaacaaatccttttagtttttgaatcatttcaaacaagttctattgtagataacatagttggtaattgcttccttgaactc 30208461  T
Q  340 a 340  Q
    |    
T  30208462 a 30208462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 33760430 - 33760530
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||| |||||||||||| ||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||    
T  33760430 tttaagtttcaaaagtcccaaacaagtcctcttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattacttctttgaactc 33760529  T
Q  340 a 340  Q
    |    
T  33760530 a 33760530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 258 - 340
Target Start/End: Complemental strand, 14717768 - 14717686
Alignment:
Q  258 caaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14717768 caaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 14717686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 11692130 - 11692207
Alignment:
Q  263 aagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||| |||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  11692130 aagttcttttagtttttgaatcgtttcaaacaagtcatattgcagatagcatagttggtaattgcttccttgaactca 11692207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 19398152 - 19398253
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||| | |||||||||||| |||  ||||||||||||  |||||||||||||||| |||||||||| ||| |||||||    
T  19398152 ctttaagtttcaaaagtctcaaacaaattcttttagtttttgaatcatttcaaacaagttctattgtagatagcatagttggtaattgtttctttgaact 19398251  T
Q  339 ca 340  Q
    ||    
T  19398252 ca 19398253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 27510162 - 27510052
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||| ||| || ||||| ||||||||||||||||| ||| |||||||||||||| |||||||   |||||| |||||||||||||    
T  27510162 aaagtggtcttttaagttttaaaagtttcaaataagtccttttagtttttgaatcgtttcaaacaagtcctattgtaataagcatagttggtaattgctt 27510063  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  27510062 ctttgaactca 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 16752006 - 16752074
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  16752006 aaagtggtcatttaagtttcaaaagtctcaaacaagttcttttagtttttgaattgtttcaaacaagtc 16752074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6740197 - 6740138
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  6740197 ctttaagtttcaaaagtctcaaacaagtctttttagtttttaaatcgtttcaaacaagtc 6740138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 14717504 - 14717563
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  14717504 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 14717563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 42993417 - 42993476
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  42993417 ctttaagtttcaaaagtcacaaacaagtccttttagtttttgaattgtttcaaacaagtc 42993476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 19398434 - 19398376
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  19398434 tttaaatttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtc 19398376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 23129156 - 23129094
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  23129156 tctttaagtttcaaaagtctaaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 23129094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 4016115 - 4016054
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  4016115 ctttaagtttcaaaaatctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 4016054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 6332958 - 6332873
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaat 324  Q
    |||||||||| ||| |||  ||||||||||||||||||||| ||| |||||||||||||  |||||||||||| ||| ||||||||    
T  6332958 ctttaagttttaaaagtcctaaacaagtccttttagtttttgaatcgtttcaaacaagttctattgtagatagaatagttggtaat 6332873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 14952213 - 14952282
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  14952213 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 14952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 30863141 - 30863210
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  30863141 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtcgttttagtttttgaatcgtttcaaacaagt 30863210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 28078648 - 28078588
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||    
T  28078648 tctttaagtttcaaaagtcccaaacaaatccttttagtttttgaattgtttcaaacaagtc 28078588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 6251892 - 6251951
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  6251892 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 6251951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 6331276 - 6331335
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  6331276 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 6331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6600378 - 6600319
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  6600378 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtc 6600319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 8689471 - 8689530
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||    
T  8689471 ctttaagtttcaaaagtctcaaaaaagtccttttagtttttgaatcgtttcaaacaagtc 8689530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 20408432 - 20408491
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  20408432 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 20408491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 30297991 - 30297932
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  30297991 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 30297932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 41282241 - 41282300
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  41282241 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 41282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 43166502 - 43166443
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||    
T  43166502 ctttaagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaagtc 43166443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 31710181 - 31710239
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  31710181 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagt 31710239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 37923639 - 37923581
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||    
T  37923639 tttaagtttcaaaagtctcaaacaagtccttttagtgtttgaatcgtttcaaacaagtc 37923581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 39824456 - 39824513
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  39824456 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagt 39824513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 11692389 - 11692333
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||    
T  11692389 ctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaa 11692333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 33760712 - 33760656
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||    
T  33760712 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaa 33760656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 3352243 - 3352184
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| || ||||||||||||||||||| ||| ||||||||||||||    
T  3352243 ctttaagtttcaaaagtcccatacaagtccttttagtttttgaatcgtttcaaacaagtc 3352184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 11000970 - 11000911
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  11000970 ctttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtc 11000911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 26035588 - 26035529
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  26035588 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 26035529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 39401952 - 39402007
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||    
T  39401952 tttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaa 39402007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 27509876 - 27509938
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||||| |||||    
T  27509876 tctttaagtttcaaaagtctcgaacaagtcattttagtttttgaatcgtttcaaacaggtcat 27509938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 8215798 - 8215858
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||| ||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  8215798 tctttaaatttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 8215858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 16096202 - 16096142
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| ||||||| || ||||||||||| ||| ||||||||||||||    
T  16096202 tctttaagtttcaaaagtcccaaacaaatcattttagtttttgaatcgtttcaaacaagtc 16096142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 20079499 - 20079443
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| |||||||||||    
T  20079499 ctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaa 20079443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 20517060 - 20517116
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||| |||||||||| ||||||||||| |||||||||||| |||||    
T  20517060 taagtttcaaaagtcccaaacaagtctttttagtttttgaattgtttcaaataagtc 20517116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 35342079 - 35342135
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| ||| ||| |||||||||||||||||| ||| |||||||||||    
T  35342079 ctttaagtttcaaaagtcccaatcaagtccttttagtttttgaatcgtttcaaacaa 35342135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 1052435 - 1052494
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||| ||||  ||||||||||| ||| ||||||||||||||    
T  1052435 ctttaagtttcaaaagtctcaaataagtttttttagtttttgaatcgtttcaaacaagtc 1052494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 17002398 - 17002343
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaaca 294  Q
    |||||||||||||| ||| || |||| |||||||||||||||||| ||||||||||    
T  17002398 ctttaagtttcaaaagtcacagacaaatccttttagtttttaaatcgtttcaaaca 17002343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 26593522 - 26593463
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| |||| |||||| ||| ||||||||||||||    
T  26593522 ctttaagtttcaaaagtcccaaacaagtcattttggtttttgaatcgtttcaaacaagtc 26593463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 16752288 - 16752242
Alignment:
Q  230 caaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  16752288 caaagtggttctttaagtttcaaaagtctcaaacaagtccttttagt 16752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 27116334 - 27116276
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| ||| ||||| |||||||||||| ||| ||||||||||||||    
T  27116334 tttaagtttcaaaagtcccaaccaagttcttttagtttttgaatcgtttcaaacaagtc 27116276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 40074850 - 40074908
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| ||||||||| |||||| ||||| ||| ||||||||||||||    
T  40074850 tttaagtttcaaaagtcccaaacaagttcttttaatttttgaatcgtttcaaacaagtc 40074908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 42263108 - 42263047
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttca 290  Q
    |||||||||||||||||||||||| ||| ||||   ||||||||||||||| ||| ||||||    
T  42263108 ccaaagtggtctttaagtttcaaaagtcccaaaatggtccttttagtttttgaatcgtttca 42263047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 19661870 - 19661814
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||| |||||||||  ||||||||||| ||| ||||||||||||||    
T  19661870 taagtttcaaaagtcccaaacaagtttttttagtttttgaatcgtttcaaacaagtc 19661814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 26035266 - 26035361
Alignment:
Q  181 tatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    |||||| ||||||||||||||||||||||||||||             |||||||||| |||||| ||||||| ||| ||||||||||||||||||    
T  26035266 tattttaggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaaatttcaaaagtcccaaacaagtccttttagt 26035361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 38964355 - 38964299
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| ||| ||||||| || ||||||||||| ||| |||||||||||    
T  38964355 ctttaagtttcaaaagtcccaaacaaatcattttagtttttgaatcgtttcaaacaa 38964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 445074 - 445035
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  445074 attgtagatagcatagttggtaattgctttcttgaactca 445035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 567750 - 567707
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaa 282  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||    
T  567750 ctttaagtttcaaaagtctaaaacaagtcctttaagtttttaaa 567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 6600459 - 6600369
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  6600459 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 6600369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 16752236 - 16752197
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  16752236 attgtagataacatagttggtaattgcttccttgaactca 16752197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 27509839 - 27509886
Alignment:
Q  230 caaagtggtctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||||||||||||| ||| ||||||||| |||| |||||    
T  27509839 caaagtggtctttaagtttcaaaagtcccaaacaagttctttaagttt 27509886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 9919241 - 9919279
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  9919241 ctttaagtttcaaaagtctcaaataagtccttttagttt 9919279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 215
Target Start/End: Original strand, 20408347 - 20408377
Alignment:
Q  185 tttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||    
T  20408347 tttggtcaaatgcatctaaaggtcctttaag 20408377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 444853 - 444914
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||| ||| ||| |||| |||||| |||||||||||||| ||| ||||||||||| ||||    
T  444853 ctttaaattttaaaagtcttaaacaaatccttttagtttttgaatcgtttcaaacaaatcat 444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 6251864 - 6251901
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  6251864 tttaagtttcaaaagtctcaaacaagtcctttaagttt 6251901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 20408392 - 20408441
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  20408392 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 20408441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 27116376 - 27116331
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtcctttta 273  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  27116376 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttta 27116331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 31710141 - 31710190
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  31710141 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 31710190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 3351904 - 3351936
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| |||||||||||||||||||||||||||    
T  3351904 tttttcgtcaaatgcatctaaaggtcctttaag 3351936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 17002437 - 17002389
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  17002437 caaagtggtcatttaagtttcaaaagtcccaaacaagtcctttaagttt 17002389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 274
Target Start/End: Complemental strand, 39002245 - 39002201
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttag 274  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||    
T  39002245 aaagtggtcttttaagtttcaaaagtcccaaacaagtccttttag 39002201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 95)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 2456192 - 2456091
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  2456192 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 2456093  T
Q  339 ca 340  Q
    ||    
T  2456092 ca 2456091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 27328776 - 27328665
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||    
T  27328776 caaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgct 27328677  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  27328676 tccttgaactca 27328665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 36444187 - 36444288
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  36444187 ctttaagtttcaaaagtctcaaacaagtccttttagtttttaaatcgtttcaaacaagtcctatagtagatagcatagttggtaattgcttccttgaact 36444286  T
Q  339 ca 340  Q
    ||    
T  36444287 ca 36444288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 2314923 - 2315035
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||     
T  2314923 ccaaagtggtcctttaagtttcaaaggtcccaaataagtccttttagtttttgaattgtttcaaacaagtcttattgtagatagcatagttggtaattgt 2315022  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  2315023 ttccttgaactca 2315035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 11949374 - 11949486
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||     
T  11949374 ccaaagtggtcatttaagtttcaaatgtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgt 11949473  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  11949474 ttccttgaactca 11949486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 12759655 - 12759810
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaatt 284  Q
    ||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||     
T  12759655 ttggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatc 12759754  T
Q  285 gtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  12759755 gtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaactca 12759810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 2094369 - 2094468
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  2094369 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 2094468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 340
Target Start/End: Original strand, 41500408 - 41500562
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattg 285  Q
    |||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||| |    
T  41500408 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttctagtttttgaatcg 41500507  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  41500508 tttcaaacaagtcctattgtacatagcatagttggtaattgcttccttgaactca 41500562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 771876 - 772035
Alignment:
Q  181 tatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttttt 279  Q
    |||| ||||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  771876 tattattggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagttttt 771975  T
Q  280 aaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
     |||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  771976 gaatc-tttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 772035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 9276756 - 9276655
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9276756 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 9276657  T
Q  339 ca 340  Q
    ||    
T  9276656 ca 9276655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 14630796 - 14630695
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  14630796 ctttaagttttaaaggtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaact 14630697  T
Q  339 ca 340  Q
    ||    
T  14630696 ca 14630695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 16246152 - 16246253
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  16246152 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 16246251  T
Q  339 ca 340  Q
    ||    
T  16246252 ca 16246253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 7379155 - 7379044
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    ||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||| ||| ||||||||||||    
T  7379155 ccaaagttgtctttaagtttcaaaagtcccaaacaagttcttttagtttttgaatcgtttcaaacaagtcataatgtagatagaatagttggtaattgct 7379056  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  7379055 tccttgaactca 7379044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 17484499 - 17484610
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||    
T  17484499 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgct 17484598  T
Q  329 tccttgaactca 340  Q
    || |||||||||    
T  17484599 tctttgaactca 17484610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 28650385 - 28650486
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  28650385 ctttaagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaatttcttccttgaact 28650484  T
Q  339 ca 340  Q
    ||    
T  28650485 ca 28650486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 33106928 - 33107029
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||    
T  33106928 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacgagtcctattgtagatatcatagttggtaattgcttccttgaact 33107027  T
Q  339 ca 340  Q
    ||    
T  33107028 ca 33107029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 37838479 - 37838378
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  37838479 ctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttctttgaact 37838380  T
Q  339 ca 340  Q
    ||    
T  37838379 ca 37838378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 2057119 - 2057007
Alignment:
Q  229 ccaaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    |||||||||||||| |||||||||| ||| || ||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  2057119 ccaaagtggtcttttaagtttcaaaagtcccagacaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagataacatagttggtaattgc 2057020  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  2057019 ttccttgaactca 2057007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 34253323 - 34253223
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    |||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  34253323 tttaagtttcaaaggtcctaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctttcttgaactc 34253224  T
Q  340 a 340  Q
    |    
T  34253223 a 34253223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 40854802 - 40854690
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| ||||| ||||||||| |||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  40854802 ccaaagtggtcctttaagtttcaaaagtcccaaactagtcctttttgtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 40854703  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  40854702 ttccttgaactca 40854690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 36211281 - 36211127
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaa-ggtctcaaacaagtccttttagtttttaaattg 285  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  36211281 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaaggtctcaaacaagtccttttaatttttaaattg 36211182  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||| |||| |||||| |||| || ||||||||||| |||||||||    
T  36211181 tttcaaacaagtcctattctagataacatagtttgtaattgcttctttgaactca 36211127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 37732091 - 37732253
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||  ||||||||||||||||||||||||||||             ||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  37732091 tttatttaaggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcttttaagtttcaaaagtctcaaacaagtccttttagttt 37732190  T
Q  278 ttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    || ||| |||||||||||||| ||||||| ||| |||| ||||||||||||| ||||||||||    
T  37732191 ttgaatcgtttcaaacaagtcttattgtaaataacatagttggtaattgctttcttgaactca 37732253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 242 - 340
Target Start/End: Complemental strand, 17134407 - 17134310
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  17134407 taagtttcaaaagtcccaaacaagtccttttagtttt-aaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 17134310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 3430575 - 3430684
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    |||||||||||||||||||||| ||| ||||||||||||  |||||||| |||   |||||||||||| |||||||||||||||| ||||||||||||||    
T  3430575 aaagtggtctttaagtttcaaaagtcccaaacaagtcctactagtttttgaataagttcaaacaagtcctattgtagatagcatagttggtaattgcttc 3430674  T
Q  331 cttgaactca 340  Q
    ||||||||||    
T  3430675 cttgaactca 3430684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 7297193 - 7297294
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||||||  | ||||||||    
T  7297193 ctttaagtttcaaaagtctcaaacaagtccttttagattttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgtcttcttgaact 7297292  T
Q  339 ca 340  Q
    ||    
T  7297293 ca 7297294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 8899863 - 8899763
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  8899863 ctttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaa-caagtcatattgtagatagcatagttggtaattgcttccatgaact 8899765  T
Q  339 ca 340  Q
    ||    
T  8899764 ca 8899763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 921203 - 921103
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||| ||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  921203 tttaagtttcaaaagtcttaaataagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttgataattgcttccttgaactc 921104  T
Q  340 a 340  Q
    |    
T  921103 a 921103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 42630155 - 42630043
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| |||  ||||||||||||||| |||||||    
T  42630155 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtcctatcatagatagcataattgataattgc 42630056  T
Q  328 ttccttgaactca 340  Q
    || ||||||||||    
T  42630055 tttcttgaactca 42630043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 1106509 - 1106619
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||| ||||||| ||  |||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||||||||||||||    
T  1106509 aaagtggtcctttaaatttcaaaagttgcaaacaagtccttttagtttttgaatcatttcaaataagtcctattgtagatagcataattggtaattgctt 1106608  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  1106609 ccttgaactca 1106619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 38751239 - 38751129
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| |||  ||||||||||||||||||||| ||| |||||||||||||| || ||||||||| ||| |||||||||||||    
T  38751239 aaagtggtcttttaagtttcaaaagtcctaaacaagtccttttagttttttaatcgtttcaaacaagtcctaatgtagatagtatagttggtaattgctt 38751140  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  38751139 ccttgaactca 38751129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 28216912 - 28216999
Alignment:
Q  229 ccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata 315  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  28216912 ccaaagtggttctttaagtttcaaaagtcccaaacaagtccttttagtttttgaattgtttcaaacaagtcatattgtagataacata 28216999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 29737940 - 29737829
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||| ||||||| | | ||||||| |||||||||||||| |||||||||||||||||| |||||| ||||||||| ||| ||||||||    
T  29737940 caaagtggtcctttaaatttcaaaaggcccaaacaaatccttttagtttttgaattgtttcaaacaagtcctattgtcgatagcatagttgataattgct 29737841  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  29737840 tccttgaactca 29737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 19180603 - 19180502
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||  ||||||||||| |||||||||| ||| |||||||||||||| |||||||||||| ||| || |||||||||||||||||||    
T  19180603 ctttaagtttcaaaagttccaaacaagtccatttagtttttgaatcgtttcaaacaagtcttattgtagatagtatagttagtaattgcttccttgaact 19180504  T
Q  339 ca 340  Q
    ||    
T  19180503 ca 19180502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 45124301 - 45124200
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||| | |||||||||||| ||| ||||||||||| || |||||||||||||||| |||||||||| |||||| ||||    
T  45124301 ctttaagtttcaaaagtctcaaacaaattcttttagtttttgaatcgtttcaaacaaatcttattgtagatagcatagttggtaattgtttccttaaact 45124202  T
Q  339 ca 340  Q
    ||    
T  45124201 ca 45124200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 9331938 - 9331846
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttcc 331  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||  |||||||||||||||    
T  9331938 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagtattgttggtaattgcttcc 9331846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 25087746 - 25087856
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||| ||||||||| ||| |||||||||| |||| |||||| |||||||||||||||||| ||||||| ||| |||| ||| |||||||||    
T  25087746 aaagtggtcattttagtttcaaaagtcccaaacaagtcatttttgtttttgaattgtttcaaacaagtcttattgtatataacatagttgataattgctt 25087845  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  25087846 ccttgaactca 25087856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 33865244 - 33865327
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||| || |||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  33865244 tcaaacaagtcattctagtttttgaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactca 33865327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 34253031 - 34253100
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||    
T  34253031 ccaaagtggtctttaaatttcaaaagtctcaaacaagtccttttagtttttaaatcgtttcgaacaagtc 34253100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 336
Target Start/End: Original strand, 43249372 - 43249468
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaa 336  Q
    ||||||||||||| ||  |||||||||||||||||||||| ||| ||||| |||||||| |||||  ||||||||| |||||||||| |||||||||    
T  43249372 tttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcgaacaagtcctattgatgatagcatagttggtaattgtttccttgaa 43249468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 7297474 - 7297415
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  7297474 ctttaagtttcaaaagtctcaaacaagtccttttagtttttaaatcgtttcaaacaagtc 7297415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 45124018 - 45124077
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  45124018 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtc 45124077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 772228 - 772158
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  772228 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 772158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 23671719 - 23671871
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||||||| ||| || |||||| |||| ||| ||    
T  23671719 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaaaagtctcaa-caaatcattttagattttgaatcgt 23671817  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||| |||||| |||  ||||||||||||||||||||||||    
T  23671818 ttcaaacaagtcttattatagataacatggttggtaattgcttccttgaactca 23671871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 23673115 - 23673054
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  23673115 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 23673054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 37653998 - 37654065
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  37653998 aaagtggtcatttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagt 37654065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 920922 - 920980
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  920922 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 920980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 27328475 - 27328545
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||||    
T  27328475 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttaaaacaagtc 27328545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 11949681 - 11949612
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||||    
T  11949681 caaagtggtcctttaagtttcaaaagtccaaaacaagtccttttagtttttaaatcgtttcaaacaagtc 11949612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 19511520 - 19511577
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  19511520 tctttaagtttcaaaagtctcaaacaaattcttttagtttttaaattgtttcaaacaa 19511577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 41178260 - 41178203
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  41178260 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagt 41178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 42629845 - 42629914
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  42629845 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 42629914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 2056824 - 2056884
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  2056824 tctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 2056884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 17484792 - 17484736
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  17484792 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 17484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 9276473 - 9276532
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  9276473 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 9276532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 36210946 - 36211004
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  36210946 tttaagtttcaaaagtcacaaacaagtccttttagtttttgaatcgtttcaaacaagtc 36211004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 38750948 - 38751006
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  38750948 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 38751006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 1106800 - 1106740
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||||    
T  1106800 tttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtcat 1106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 8396802 - 8396734
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||  |||||||||||||    
T  8396802 aaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcatttcaaacaagtc 8396734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 8899584 - 8899640
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  8899584 taagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 8899640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 25088039 - 25087979
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| |||||||||||||  ||||||||||| ||| ||||||||||||||    
T  25088039 tctttaagtttcaaaagtctcaaacaagtttttttagtttttgaatcgtttcaaacaagtc 25087979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 28650671 - 28650611
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  28650671 tctttaagtttcaaaagtcccaaacaagttcttttagtttttgaatcgtttcaaacaagtc 28650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 2315217 - 2315158
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  2315217 ctttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtc 2315158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2455909 - 2455968
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||    
T  2455909 ctttaagtttcaaaagtcccaagcaagtccttttagtttttgaatcgtttcaaacaagtc 2455968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 12759991 - 12759932
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  |||||||||||||||||| ||||||| ||| ||||||||||||||    
T  12759991 ctttaagtttcaacagtctcaaacaagtcctttaagtttttgaatcgtttcaaacaagtc 12759932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 16246435 - 16246376
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  16246435 ctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 16246376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 41177994 - 41178061
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgta 306  Q
    |||||||||||||| ||| ||||||| || ||||||||||| ||| |||||||||||||| |||||||    
T  41177994 ctttaagtttcaaaagtcccaaacaaatcattttagtttttgaatcgtttcaaacaagtcctattgta 41178061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 33107211 - 33107150
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||| |||||| |||||||||||||| | | ||||||||||||||||    
T  33107211 ctttaagtttcaaaagtcttaaacaaatccttttagtttttgagtcgtttcaaacaagtcat 33107150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 37654286 - 37654237
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  37654286 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagttt 37654237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 40854499 - 40854564
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||| |||||| ||| |||||||||||||| ||||||||||| ||| |||||||||||    
T  40854499 aaagtggtcttttaagttttaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaa 40854564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 29737647 - 29737703
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||| ||||||| ||||||||||| |||||||||||||| ||| |||||||||||    
T  29737647 ctttaaatttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaa 29737703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 3430866 - 3430807
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||||||| ||||||||||| ||| ||||||||||||||    
T  3430866 ctttaagtttcaaaagttccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 3430807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 7378862 - 7378921
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| |||||||    
T  7378862 ctttaagtttcaaaagtcccaaagaagtccttttagtttttgaatcgtttcacacaagtc 7378921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 19916228 - 19916169
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||| || ||||||||||| ||| ||||||||||||||    
T  19916228 ctttaagtttcaaaagtcccaaacaaatctttttagtttttgaatcgtttcaaacaagtc 19916169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 33865510 - 33865448
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||| |||||||| ||| ||| ||| |||||||||||||| ||| ||||||||||||||||    
T  33865510 tctttatgtttcaaaagtcccaaccaaatccttttagtttttgaatcgtttcaaacaagtcat 33865448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 2094651 - 2094594
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||| ||| |||||||||||||||||||| ||||| |||  ||||||||||||    
T  2094651 tttaagtttgaaaagtctcaaacaagtccttttaatttttgaatcctttcaaacaagt 2094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 3358109 - 3358158
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgttt 288  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  3358109 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgttt 3358158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 19915957 - 19916002
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  19915957 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagt 19916002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 9331664 - 9331704
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttttt 279  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  9331664 ctttaagtttcaaaagtcccaaacaagtccttttagttttt 9331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 36444465 - 36444409
Alignment:
Q  244 agtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||| ||| |||||||||| ||||||||||| ||| ||| ||||||||||||    
T  36444465 agtttcaaaagtcacaaacaagtctttttagtttttgaatcgttacaaacaagtcat 36444409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 43249647 - 43249595
Alignment:
Q  246 tttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||| ||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  43249647 tttcaaaagtcccaaacaagttcttttagtttttgaatcgtttcaaacaagtc 43249595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 8396572 - 8396611
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  8396572 attgtagatagcatagttgataattgcttccttgaactca 8396611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 17134128 - 17134187
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||| ||||||| ||||||| ||| ||||||||||||||    
T  17134128 ctttaagtttcaaaagttccaaacaggtcctttaagtttttgaatcgtttcaaacaagtc 17134187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 19180321 - 19180380
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||  ||||||||||| ||| |||| |||||||||    
T  19180321 ctttaagtttcaaaagtcccaaacaagttattttagtttttgaatcgttttaaacaagtc 19180380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 19916008 - 19916047
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  19916008 attgtagatagcatagttggtaattggttccttgaactca 19916047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 37838180 - 37838239
Alignment:
Q  241 ttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||| ||| ||||||| || ||||||||||| |||  |||||||||||||||    
T  37838180 ttaagtttcaaaagtcccaaacaaatcattttagtttttgaatcatttcaaacaagtcat 37838239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 19180292 - 19180330
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  19180292 ctttaagtttcaaaagtctcaaacaagtcctttaagttt 19180330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 37732434 - 37732376
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||| ||||||| |||  ||||||||| ||||||||||| ||| ||||||||||||||    
T  37732434 tttaaatttcaaaagtcctaaacaagtcattttagtttttgaatcgtttcaaacaagtc 37732376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 3430906 - 3430857
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||| |||||    
T  3430906 ccaaagtggtcctttaagtttcaaaagtctcaaacaaatcctttaagttt 3430857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 8899921 - 8899888
Alignment:
Q  182 atttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| |||||||||||||||||||||||||||||    
T  8899921 atttatggtcaaatgcatctaaaggtcctttaag 8899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 28650327 - 28650360
Alignment:
Q  182 atttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| ||||||||||||||||||||||||||||    
T  28650327 attttaggtcaaatgcatctaaaggtcctttaag 28650360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 41500726 - 41500685
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||| |||||||||||||| ||| ||||||||||||||    
T  41500726 tcaaacaaatccttttagtttttgaatcgtttcaaacaagtc 41500685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 920831 - 920867
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||  ||||||||||||||||||||||||||||    
T  920831 tttatttaaggtcaaatgcatctaaaggtcctttaag 920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Complemental strand, 16246517 - 16246489
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  16246517 tggtcaaatgcatctaaaggtcctttaag 16246489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 271
Target Start/End: Original strand, 29737618 - 29737650
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttt 271  Q
    |||||||||||||| ||||||||||||||||||    
T  29737618 ctttaagtttcaaaagtctcaaacaagtccttt 29737650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Complemental strand, 41178343 - 41178315
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  41178343 tggtcaaatgcatctaaaggtcctttaag 41178315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 86)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 23972243 - 23972355
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||    
T  23972243 ccaaagtggtcctttaagtttcaaaggtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgc 23972342  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  23972343 ttccttgaactca 23972355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 43806483 - 43806593
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  43806483 aaagtggtcctttaagtttcaaaagtcgcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgctt 43806582  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  43806583 ccttgaactca 43806593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 260159 - 260058
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  260159 ctttaagtttcaaaattctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaact 260060  T
Q  339 ca 340  Q
    ||    
T  260059 ca 260058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 655762 - 655863
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  655762 ctttaagtttcaaaattctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaact 655861  T
Q  339 ca 340  Q
    ||    
T  655862 ca 655863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 841497 - 841598
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  841497 ctttaagtttcaaaattctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaact 841596  T
Q  339 ca 340  Q
    ||    
T  841597 ca 841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 36400029 - 36400130
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36400029 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaact 36400128  T
Q  339 ca 340  Q
    ||    
T  36400129 ca 36400130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 340
Target Start/End: Complemental strand, 37933881 - 37933723
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaa 281  Q
    |||||||||||||||||||||| ||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |    
T  37933881 tttttggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtccttttagtttttga 37933782  T
Q  282 attgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    || |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  37933781 atcgtttcaaacaagtcttatcgtagatagcatagttggtaattgcttccttgaactca 37933723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 28496305 - 28496415
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||    
T  28496305 aaagtggtcatttaagtttcaaaggtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgctt 28496404  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  28496405 ccttgaactca 28496415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 513489 - 513388
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  513489 ctttaagtttcaaaagtctcaaactagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 513390  T
Q  339 ca 340  Q
    ||    
T  513389 ca 513388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 35443545 - 35443392
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||| ||| ||    
T  35443545 ggtcaaatgcatctaaaggtcctttaagattttcatttttcccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttttgtttttgaatcgt 35443446  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  35443445 ttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaactca 35443392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 441022 - 440921
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  441022 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttccttgaact 440923  T
Q  339 ca 340  Q
    ||    
T  440922 ca 440921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 38107281 - 38107180
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  38107281 ctttaagtttcaaaagtcccaaaaaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaact 38107182  T
Q  339 ca 340  Q
    ||    
T  38107181 ca 38107180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 2533453 - 2533353
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  2533453 tttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcatattgtagatatcatagttggtaattgcttccttgaactc 2533354  T
Q  340 a 340  Q
    |    
T  2533353 a 2533353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 35884394 - 35884490
Alignment:
Q  244 agtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  35884394 agtttcaaaggtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactca 35884490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 336
Target Start/End: Original strand, 41536487 - 41536583
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaa 336  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  41536487 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaa 41536583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 4649331 - 4649232
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  4649331 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtccaattgtagatagcataattggtaattgtttccttgaactc 4649232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 24193079 - 24193190
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||| ||| ||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||    
T  24193079 caaagtggtcctttaaattttaaaagtctcaaacaagtccttttagttttttaatcgtttcaaacaagtcctattgtagataacatagttggtaattgct 24193178  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  24193179 tccttgaactca 24193190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 1293677 - 1293567
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||| ||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||| |||||||||||||    
T  1293677 aaagtggtcctttaaattttaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatgttgtagataacatagttggtaattgctt 1293578  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  1293577 ccttgaactca 1293567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 38633660 - 38633770
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||  || ||||||||||||| |||||||||||||    
T  38633660 aaagtggtcttttaagtttcaaaagtctcaaacaggtccttttagtttttgaatcgtttcaaacaagttctaatgtagatagcatagttggtaattgctt 38633759  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  38633760 ccttgaactca 38633770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 3876090 - 3875989
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  3876090 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaact 3875991  T
Q  339 ca 340  Q
    ||    
T  3875990 ca 3875989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 22683947 - 22684048
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  22683947 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcatttcaaacaagtcatattgtagatatcatagttggtaattgtttccttgaact 22684046  T
Q  339 ca 340  Q
    ||    
T  22684047 ca 22684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 15847303 - 15847193
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |   |||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  15847303 aaagtggtcctttaagtttcaaaagctccaaataagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctt 15847204  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  15847203 ccttgaactca 15847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 38208935 - 38208834
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    |||||||||||||||||||| ||||||||  ||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  38208935 tctttaagtttcaaaggtcttaaacaagtt-ttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttctttgaac 38208837  T
Q  338 tca 340  Q
    |||    
T  38208836 tca 38208834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 13797270 - 13797169
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||||||| |||||||    
T  13797270 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaaatcctattgtatatagcatagttggtaattgcttctttgaact 13797171  T
Q  339 ca 340  Q
    ||    
T  13797170 ca 13797169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 9056286 - 9056398
Alignment:
Q  229 ccaaagtggtct-ttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||| |||| |||||||||||| || |||||||| || ||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||||||    
T  9056286 ccaaagtcgtctcttaagtttcaaaagtttcaaacaaatcattttagtttttgaattgtttcaaacaagtcctattgtagataacatagttggtaattgc 9056385  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  9056386 ttctttgaactca 9056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 33652032 - 33651922
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| ||| |||||||||||| || ||||||| ||    
T  33652032 aaagtggtcttttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtcctatcgtagatagcatagtttgtaattgttt 33651933  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  33651932 ccttgaactca 33651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 12010745 - 12010630
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatatt---gtagatagcataattggtaat 324  Q
    ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||| ||||   |||||||||||| ||||||||    
T  12010745 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcattttagtttttgaattgtttcaaacaagtcctattgtagtagatagcatagttggtaat 12010646  T
Q  325 tgcttccttgaactca 340  Q
    || | |||||||||||    
T  12010645 tgttgccttgaactca 12010630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 243 - 340
Target Start/End: Original strand, 28707410 - 28707506
Alignment:
Q  243 aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| ||||||| |||||| ||||||||||| ||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  28707410 aagtttcaaaagtctcaagcaagtc-ttttagtttttgaatcgtttcaaacaaatcctattgtagatatcataattggtaattgcttccttgaactca 28707506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 336
Target Start/End: Original strand, 40301843 - 40301949
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||  ||| |||||||||||| |||| ||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  40301843 aaagtggtcatttaagtttcaaatgtcctaaataagtccttttagattttgaatcgtttcaaaaaagtcatattgtagatagcatagttggtaattgctt 40301942  T
Q  330 ccttgaa 336  Q
    | |||||    
T  40301943 cattgaa 40301949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 24430520 - 24430631
Alignment:
Q  230 caaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    ||||||||||||| ||||||||||  ||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||| ||| |||||| |    
T  24430520 caaagtggtcttttaagtttcaaaaatccaaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagtatagttgataattgtt 24430619  T
Q  329 tccttgaactca 340  Q
    |  |||||||||    
T  24430620 ttattgaactca 24430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 22684291 - 22684171
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||| ||||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| ||||||||||||||||||||    
T  22684291 tttaattttggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagttt 22684192  T
Q  278 ttaaattgtttcaaacaagtc 298  Q
    || ||| ||||||||||||||    
T  22684191 ttgaatcgtttcaaacaagtc 22684171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 8137324 - 8137244
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata 315  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||      |||||||||||||||| ||||||||||||||||    
T  8137324 caaagtggtcctttaagtttcaaaggtcccaaacaagtccttttagtt------ttgtttcaaacaagtcttattgtagatagcata 8137244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 39513328 - 39513399
Alignment:
Q  269 ttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||||||||||||| ||||| || |||||||| |||| ||||||||||||| ||||||||||    
T  39513328 ttttagtttttaaattgtttcaaataagtcctaatgtagataacatagttggtaattgctttcttgaactca 39513399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 29485175 - 29485245
Alignment:
Q  229 ccaaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  29485175 ccaaagtggtcttttaagtttcaaaagtcacaaacaagtccttttagtttttgaatcgtttcaaacaagtc 29485245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 35884671 - 35884613
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  35884671 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 35884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 23972549 - 23972480
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||    
T  23972549 caaagtggtcatttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtc 23972480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 9884756 - 9884816
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||    
T  9884756 tttaagtttcaaaagtctcaaacaagtccttttagtttttgagtcgtttcaaacaagtcat 9884816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 28496605 - 28496537
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||    
T  28496605 aaagtggtcctttaagtttcaaaagtctcaaacaaatccttttagttttttaatcgtttcaaacaagtc 28496537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 42988465 - 42988409
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  42988465 taagtttcaaaagtctcaaacaagtctttttagtttttaaatcgtttcaaacaagtc 42988409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 28707688 - 28707629
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  28707688 ctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtc 28707629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 37933541 - 37933600
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  37933541 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 37933600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 38633946 - 38633887
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  38633946 ctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtc 38633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 259877 - 259935
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  259877 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagt 259935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 440728 - 440798
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||| |||| ||| ||||||||||||||    
T  440728 ccaaagtggtcctttaagttttaaaagtctcaaacaagtccttttagcttttgaatcgtttcaaacaagtc 440798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 656044 - 655986
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  656044 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagt 655986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 841779 - 841721
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  841779 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagt 841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 13796989 - 13797047
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||    
T  13796989 tttaagtttcaaaaatctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 13797047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 23935121 - 23935191
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| ||| |||| ||||||||||||||||| ||| ||||||||||||||    
T  23935121 ccaaagtggtcatttaagtttcaaaagtcccaaataagtccttttagtttttgaatcgtttcaaacaagtc 23935191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 35443211 - 35443269
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  35443211 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 35443269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 330
Target Start/End: Original strand, 42988187 - 42988276
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    ||||||||| ||| ||||||||||| |||||||||||||| ||| |||||||| ||||| |||||||||||  ||| ||| ||||||||||    
T  42988187 tttaagttttaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaa-aagtcctattgtagataatatagttgataattgcttc 42988276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 8137072 - 8137128
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||    
T  8137072 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaa 8137128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 24430814 - 24430754
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||  |||||||||||||    
T  24430814 tctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcatttcaaacaagtc 24430754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 38208642 - 38208710
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||| || ||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||    
T  38208642 aaagtggtcttttaaatttcaaaagtctcagacaagtccttttagtttttgaatcgtttcaaacaagtc 38208710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 39295392 - 39295333
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtca 299  Q
    ||||||||||||| ||| |||| ||||||||||||||||| ||| |||||||||||||||    
T  39295392 tttaagtttcaaaagtcccaaataagtccttttagtttttgaatcgtttcaaacaagtca 39295333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 40302143 - 40302076
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||||||| ||| ||  ||||||| |||||||||||||| ||| ||||||||||||||    
T  40302143 aaagtggtctttaagtttaaaaagttccaaacaaatccttttagtttttgaatcgtttcaaacaagtc 40302076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 6016104 - 6016162
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||    
T  6016104 ctttaagtttcaaaagtcacaaacaagtctttttagtttttgaatcgtttcaaacaagt 6016162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 15847039 - 15847093
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaaca 294  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||    
T  15847039 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaaca 15847093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 43806774 - 43806716
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  43806774 tttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtc 43806716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 12010450 - 12010507
Alignment:
Q  241 ttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||| ||| ||||||||||||||||| |||| ||| ||||||||||||||    
T  12010450 ttaagtttcaaaagtcccaaacaagtccttttagcttttgaatcgtttcaaacaagtc 12010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 340
Target Start/End: Original strand, 36218760 - 36218840
Alignment:
Q  259 aaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||  ||| ||| ||||||||| ||||||||||    
T  36218760 aaacaagtcattttagtttttgaatcgtttcaaacaagtcatgatgtagataatatagttgataattgctt-cttgaactca 36218840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 9056579 - 9056519
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||| ||||    
T  9056579 tttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaaatcat 9056519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 39513582 - 39513526
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaaca 294  Q
    ||||||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||    
T  39513582 tctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaaca 39513526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 1293347 - 1293394
Alignment:
Q  230 caaagtggtctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  1293347 caaagtgatctttaagtttcaaaagtctcaaacaagtcctttaagttt 1293394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2533171 - 2533230
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||  ||||||||| ||||||||||| ||| ||||||||||||||    
T  2533171 ctttaagtttcaaaagtcctaaacaagtcattttagtttttgaatcgtttcaaacaagtc 2533230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 4649049 - 4649108
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||  ||| ||||||||||||||    
T  4649049 ctttaagtttcaaaagtcccaaacaagtcattttagttttcgaatcgtttcaaacaagtc 4649108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 41536763 - 41536708
Alignment:
Q  245 gtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||| |||||||||||||||||||||||||| ||| |||| |||||| ||||    
T  41536763 gtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttgaaacaattcat 41536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 3875785 - 3875873
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttag 274  Q
    |||||||||||||||||||||||||||||             ||||||||||| |||||||||||||  ||||||||||||||||||||    
T  3875785 tggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcatttaagtttcaaaaatctcaaacaagtccttttag 3875873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 38107000 - 38107056
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||    
T  38107000 tttaagtttcaaaagtcccaaacaagtc-ttttagtttttgaatcgtttcaaacaagt 38107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 9056695 - 9056663
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||||    
T  9056695 tttttggtcaaatgcatctaaaggtcctttaag 9056663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 1293385 - 1293444
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||  || |||||||||||||||| ||||| ||| ||||||||| ||||    
T  1293385 ctttaagtttcaaaaatcacaaacaagtccttttaatttttgaatcgtttcaaactagtc 1293444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 275
Target Start/End: Complemental strand, 6016366 - 6016331
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6016366 tttaagtttcaaaagtctcaaacaagtccttttagt 6016331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 7434785 - 7434844
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| |||| || ||| |||||||||||||||||||||| ||| | ||||||||||||    
T  7434785 ctttaaatttcgaaagtcccaaacaagtccttttagtttttgaatcgcttcaaacaagtc 7434844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 7435006 - 7434967
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  7435006 attgtagataacatagttggtaattgcttccttgaactca 7434967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 23935353 - 23935314
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  23935353 attgtagatagcatagttgataattgcttccttgaactca 23935314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 23935406 - 23935359
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  23935406 ccaaagtggtcctttaagtttcaaaagtctcaaacaaatccttttagt 23935359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 24193525 - 24193466
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||| |||||||| ||||||||||| || ||||||||||| | | ||||||||||||||    
T  24193525 ctttatgtttcaaaagtctcaaacaaatctttttagtttttgattcgtttcaaacaagtc 24193466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 29485406 - 29485367
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  29485406 attgtagataacatagttggtaattgcttccttgaactca 29485367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 36219021 - 36218966
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||| ||| ||| |||| ||||||||||||||||||||| |||| ||||||||||    
T  36219021 tttaacttttaaaagtcttaaacaagtccttttagtttttgaattatttcaaacaa 36218966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 21356716 - 21356654
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttca 290  Q
    ||||||||||| ||||||||| ||| ||||||||||||| |||| ||||||| ||| ||||||    
T  21356716 ccaaagtggtcctttaagtttaaaaagtctcaaacaagttctttcagtttttgaatcgtttca 21356654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 33651729 - 33651799
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||| ||| |||| ||||| ||| ||||||||||| ||| |||| |||||||||    
T  33651729 ccaaagtggtcctttaagttttaaaagtctgaaacatgtcattttagtttttgaatcgttttaaacaagtc 33651799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 35443169 - 35443214
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtcctttta 273  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  35443169 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttta 35443214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 36342019 - 36341986
Alignment:
Q  181 tatttttggtcaaatgcatctaaaggtcctttaa 214  Q
    |||||||||||||||||||||||| |||||||||    
T  36342019 tatttttggtcaaatgcatctaaaagtcctttaa 36341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 513207 - 513263
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| ||| ||||||| |  ||||||||||| ||| |||||||||||    
T  513207 ctttaagtttcaaaagtcccaaacaaattattttagtttttgaatcgtttcaaacaa 513263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 8137370 - 8137338
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| ||||||||||||||||||||||||||||    
T  8137370 ttttaggtcaaatgcatctaaaggtcctttaag 8137338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 35884336 - 35884364
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  35884336 tggtcaaatgcatctaaaggtcctttaag 35884364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 38633985 - 38633937
Alignment:
Q  230 caaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  38633985 caaagtggtcttttaagtttcaaaagtcccaaacaagtcctttaagttt 38633937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 121)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 17847044 - 17847156
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  17847044 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttatagtttttgaatcgtttcaaacaagtcctattgtagatagcataattggtaattgc 17847143  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  17847144 ttccttgaactca 17847156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 336
Target Start/End: Original strand, 28812189 - 28812343
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaa 281  Q
    |||||||||||||||||||||||||||||||||             |||||||| || ||||||||||||| |||||||||||||||||||||||||| |    
T  28812189 tttttggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctttaagtttcaaaagtctcaaacaagtccttttagtttttga 28812288  T
Q  282 attgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaa 336  Q
    || |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  28812289 atcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaa 28812343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 33807729 - 33807840
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||    
T  33807729 ccaaagtcgtctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgct 33807828  T
Q  329 tccttgaactca 340  Q
    || |||||||||    
T  33807829 tctttgaactca 33807840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 25730422 - 25730321
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25730422 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgattccttgaact 25730323  T
Q  339 ca 340  Q
    ||    
T  25730322 ca 25730321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 37382036 - 37381927
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  37382036 aaagtggtttttaagtttcaaaagtctcaaacaagtcctttttgtttttaaatcatttcaaacaagtcatattgtagatagcatagttggtaattgcttc 37381937  T
Q  331 cttgaactca 340  Q
    ||| ||||||    
T  37381936 cttaaactca 37381927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 5227624 - 5227471
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             |||||||||| |||||||||||||| ||| |||||||||| ||||||||||| ||| ||    
T  5227624 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggttctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgt 5227525  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  5227524 ttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 5227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 28264877 - 28264724
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  28264877 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 28264778  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28264777 ttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 28264724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 19496061 - 19496162
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  19496061 ctttaaatttcaaaggtcccaaacaagtccttttagtttttgaattgtttcaaacaagtcctattgtagataccatagttggtaattgcttccttgaact 19496160  T
Q  339 ca 340  Q
    ||    
T  19496161 ca 19496162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 42273984 - 42273883
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  42273984 ctttaagtttcaaaaatctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 42273885  T
Q  339 ca 340  Q
    ||    
T  42273884 ca 42273883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 55517144 - 55517245
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  55517144 ctttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttctttgaact 55517243  T
Q  339 ca 340  Q
    ||    
T  55517244 ca 55517245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 22298711 - 22298599
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||     
T  22298711 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagccctattgtagatagcataattggtaattgt 22298612  T
Q  328 ttccttgaactca 340  Q
    |||||| ||||||    
T  22298611 ttccttaaactca 22298599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 50276086 - 50276198
Alignment:
Q  229 ccaaagtggtctt-taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  50276086 ccaaagtggtcctgtaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 50276185  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  50276186 ttccttgaactca 50276198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 11795103 - 11795214
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||| |    
T  11795103 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattctagatagcatagttggtaattgtt 11795202  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  11795203 tccttgaactca 11795214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 15985202 - 15985091
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||| ||||||||||||    
T  15985202 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattctagataacatagttggtaattgct 15985103  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  15985102 tccttgaactca 15985091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 48551713 - 48551824
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  48551713 caaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcatattgtagatagcatggttggtaattgct 48551812  T
Q  329 tccttgaactca 340  Q
    | ||||||||||    
T  48551813 ttcttgaactca 48551824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 30466953 - 30467063
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| ||||||||| |||    
T  30466953 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagttctattgtagatagcatagttggtaatttctt 30467052  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  30467053 ccttgaactca 30467063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 33173927 - 33174080
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||| ||    
T  33173927 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcatttaagtttcaaaagtctcaaacaagtccttttagttttcaaatcgt 33174026  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| ||||||||||  |||| ||||||||||||||||||||||||    
T  33174027 ttcaaacaagtcttattgtagatttcatagttggtaattgcttccttgaactca 33174080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 9339082 - 9339183
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  9339082 ctttaagtttcaaaagtctcaaacaattccttttagtttttgaatcatttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaact 9339181  T
Q  339 ca 340  Q
    ||    
T  9339182 ca 9339183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 26017605 - 26017504
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| ||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  26017605 ctttaagtttcaaaagtcacaaacaagtccttgtagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 26017506  T
Q  339 ca 340  Q
    ||    
T  26017505 ca 26017504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 31591257 - 31591156
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||| |||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31591257 ctttaagtttcaaaagtctcaaacgagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 31591158  T
Q  339 ca 340  Q
    ||    
T  31591157 ca 31591156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 49118793 - 49118692
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  49118793 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcattgaact 49118694  T
Q  339 ca 340  Q
    ||    
T  49118693 ca 49118692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 24458595 - 24458691
Alignment:
Q  244 agtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  24458595 agtttcaaaggtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagataacatagttggtaattgcttccttgaactca 24458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 48149692 - 48149580
Alignment:
Q  229 ccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| || |||||||| |||| |||||||||||    
T  48149692 ccaaagtggttctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgc 48149593  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  48149592 ttccttgaactca 48149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 23553299 - 23553145
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattg 285  Q
    |||||||||||||||||||||||||||||             | ||||||||| ||||||||| ||| ||| ||||||| |||||||||||||| ||| |    
T  23553299 tggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctttaagttttaaaagtcacaaacaaatccttttagtttttgaatcg 23553200  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  23553199 tttcaaacaagtcatgttgtagatagcataattgttaattgcttccttgaactca 23553145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 50542303 - 50542414
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||| || |||||||||||||||| ||||||||||||    
T  50542303 caaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgttttaaacaaatcttattgtagatagcatagttggtaattgct 50542402  T
Q  329 tccttgaactca 340  Q
    || |||||||||    
T  50542403 tcattgaactca 50542414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 4544944 - 4545045
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||| ||||    
T  4544944 ctttaagtttcaaaggtcctaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttaaact 4545043  T
Q  339 ca 340  Q
    ||    
T  4545044 ca 4545045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 12196651 - 12196550
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||| |||||| ||| |||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  12196651 ctttaagcttcaaaagtcccaaacaagtccttttagtttttgaatcatttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 12196552  T
Q  339 ca 340  Q
    ||    
T  12196551 ca 12196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 20534347 - 20534246
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  20534347 ctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaagtcctattgttgatagcatagttggtaattgcttctttgaact 20534248  T
Q  339 ca 340  Q
    ||    
T  20534247 ca 20534246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 23134965 - 23135066
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| || |||||||| |||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  23134965 ctttaagtttcaaaagtttcaaacaaatccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaact 23135064  T
Q  339 ca 340  Q
    ||    
T  23135065 ca 23135066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 31973773 - 31973672
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  31973773 ctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaact 31973674  T
Q  339 ca 340  Q
    ||    
T  31973673 ca 31973672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 32118896 - 32118795
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||| |||||||    
T  32118896 ctttaagtttcaaaagtcccaaacaaatccttttagtttttaaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttcattgaact 32118797  T
Q  339 ca 340  Q
    ||    
T  32118796 ca 32118795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 44490501 - 44490400
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||| |||||||    
T  44490501 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatatcatagttggtaattgcttcattgaact 44490402  T
Q  339 ca 340  Q
    ||    
T  44490401 ca 44490400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 48707692 - 48707793
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||||| ||||||| |||| |||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  48707692 ctttaagtttcaaaagtctcaaacaagttcttttagattttgaatcttttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 48707791  T
Q  339 ca 340  Q
    ||    
T  48707792 ca 48707793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 31208925 - 31208825
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||  |||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  31208925 tttaagtttcaaaagtccaaaacaactccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactc 31208826  T
Q  340 a 340  Q
    |    
T  31208825 a 31208825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 10588772 - 10588661
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||| ||||||| |||||||| |||||  || |||||||||||||| |||||||||||||||| ||||||||||||    
T  10588772 caaagtggtcctttaagtttcaaaagtcccaaacaaatccttttaatttttggatcgtttcaaacaagtcgtattgtagatagcatagttggtaattgct 10588673  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  10588672 tccttgaactca 10588661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 35930231 - 35930120
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||||||  ||||||| |||||||||||||| ||| |||||||||||||  |||||||||||||||| ||||||||||||    
T  35930231 caaagtggtcctttaagtttcaaaggttccaaacaaatccttttagtttttgaatcgtttcaaacaagttctattgtagatagcatagttggtaattgct 35930132  T
Q  329 tccttgaactca 340  Q
    ||| ||||||||    
T  35930131 tccatgaactca 35930120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 8881963 - 8882073
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||| ||| |||||||||    
T  8881963 aaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattctagatagcatagttgataattgctt 8882062  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  8882063 ctttgaactca 8882073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 39995115 - 39995227
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||| |||||||||||||  ||||||||||| |||| |||||||||||    
T  39995115 ccaaagtggtcctttaagttttaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagttctattgtagataacatagttggtaattgc 39995214  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  39995215 ttcattgaactca 39995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 28159903 - 28160013
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| |||||||||||||  |||||||||||| |||||||||||| |||  ||||||||||||| ||||||||||| |||| |||||||||||||    
T  28159903 aaagtggtcctttaagtttcaaaaatctcaaacaagttcttttagtttttgaatcatttcaaacaagtcttattgtagataccatagttggtaattgctt 28160002  T
Q  330 ccttgaactca 340  Q
     ||||||||||    
T  28160003 tcttgaactca 28160013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 40988820 - 40988714
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||    ||| |||||||||||||| |||||||||||||||| ||| |||||||||    
T  40988820 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttaatt----aatcgtttcaaacaagtcctattgtagatagcatagttgataattgctt 40988725  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  40988724 ccttgaactca 40988714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 14564979 - 14564877
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||| |||||||  |||||||||| ||| |||||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||||||| ||||||    
T  14564979 tctttaaatttcaaaactctcaaacaaatccatttagtttttgaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttcattgaac 14564880  T
Q  338 tca 340  Q
    |||    
T  14564879 tca 14564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 30141058 - 30141168
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| ||||||||||  |   ||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||| |||||||||||||    
T  30141058 aaagtggtcttttaagtttcaaaaattctaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgttgatagcatagttggtaattgctt 30141157  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  30141158 cattgaactca 30141168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 33693283 - 33693393
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||| ||||||| ||  |||| ||||||||||| ||||| ||| |||||||||||||| | |||||||||||||| |||||||||||||    
T  33693283 aaagtggtcctttaaatttcaaaagttccaaataagtccttttaatttttgaatcgtttcaaacaagtcctgttgtagatagcatagttggtaattgctt 33693382  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  33693383 ccttgaactca 33693393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 32318135 - 32318034
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||| ||  ||| |||||||||||||||||| |||  ||||||||||||| ||||||||||| |||| |||||||||||||| ||||||    
T  32318135 tctttaagtttcaaaagtaccaa-caagtccttttagtttttgaatcatttcaaacaagtcctattgtagataacatagttggtaattgcttcattgaac 32318037  T
Q  338 tca 340  Q
    |||    
T  32318036 tca 32318034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 51371013 - 51371103
Alignment:
Q  246 tttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaa 336  Q
    ||||||| |||||||| || |||||||| ||||| ||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  51371013 tttcaaaagtctcaaataaatccttttaatttttgaatcgtttcaaacaagttctattgtagatagcatagttggtaattgcttccttgaa 51371103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 25734174 - 25734283
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    |||||||||||||||||| ||| ||||||||||| ||   ||||||||| |||  ||||||||||||| ||||||||||| |||| |||||||||||||     
T  25734174 aaagtggtctttaagttttaaaagtctcaaacaactctagttagtttttgaatcatttcaaacaagtcctattgtagataacatagttggtaattgctta 25734273  T
Q  331 cttgaactca 340  Q
     |||||||||    
T  25734274 attgaactca 25734283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 2055459 - 2055359
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||| ||| ||  |||||||||| |||| |||||| ||| |||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||    
T  2055459 tttaagttttaaaagttccaaacaagtcgtttttgtttttgaatcgtttcaaacaagtcatattgtagataacatagttgataattgcttccttaaactc 2055360  T
Q  340 a 340  Q
    |    
T  2055359 a 2055359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 17993002 - 17993077
Alignment:
Q  265 gtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||    
T  17993002 gtccttttagtttttgaatcgtttcaaacaagtcctattgtaaatagcatagttggtaattgcttccttaaactca 17993077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 14564684 - 14564754
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  14564684 ccaaagtggtcctttaagttttaaaagtctcaaacaagtccttttagtttttaaatcgtttcaaacaagtc 14564754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 35929928 - 35929998
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  35929928 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 35929998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 48551999 - 48551929
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  48551999 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 48551929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 42549873 - 42549804
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  42549873 caaagtggtcatttaagtttcaaaggtctcaaacaagtccttttagtttttgaatcgtttcaaataagtc 42549804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 25734476 - 25734404
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  25734476 ccaaagtggtcctttaagttttaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 25734404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12196377 - 12196436
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  12196377 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 12196436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 19496387 - 19496328
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  19496387 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 19496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 28812528 - 28812469
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  28812528 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 28812469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 24458872 - 24458814
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  24458872 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 24458814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 298
Target Start/End: Original strand, 26017265 - 26017381
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaa 281  Q
    |||| ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| |    
T  26017265 ttttaggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttga 26017364  T
Q  282 attgtttcaaacaagtc 298  Q
    || ||||||||||||||    
T  26017365 atcgtttcaaacaagtc 26017381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 9339368 - 9339312
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  9339368 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 9339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 298
Target Start/End: Complemental strand, 19169089 - 19168978
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             |||||||| || ||||||||||||| |||||||||||||| ||||||||||| ||| ||    
T  19169089 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcatttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgt 19168990  T
Q  287 ttcaaacaagtc 298  Q
    ||||||||||||    
T  19168989 ttcaaacaagtc 19168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 28160195 - 28160139
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  28160195 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 28160139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 44490109 - 44490165
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  44490109 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 44490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 49118510 - 49118566
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  49118510 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 49118566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 8882255 - 8882196
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||    
T  8882255 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaatcaagtc 8882196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 15984909 - 15984968
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  15984909 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 15984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 17993259 - 17993200
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  17993259 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 17993200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 31208647 - 31208706
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||    
T  31208647 ctttaagtttcaaaagtatcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 31208706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 33174262 - 33174203
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  33174262 ctttaaatttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 33174203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 42273699 - 42273758
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  42273699 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 42273758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 10588480 - 10588538
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||||    
T  10588480 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgttttaaacaagtc 10588538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 32118613 - 32118671
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||    
T  32118613 ctttaagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaagt 32118671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 39700231 - 39700126
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||||||| ||     ||| ||||| || || ||| |||||||||||||| |||| |||||| ||||||||||||||| ||    
T  39700231 aaagtggtcctttaagtttcaaaggtccca-----gtctttttaattattgaatcgtttcaaacaagtcttattatagataacataattggtaattgttt 39700137  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  39700136 ccttgaactca 39700126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 23552960 - 23553017
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||    
T  23552960 tctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaa 23553017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 25730139 - 25730196
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaag 296  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||    
T  25730139 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaag 25730196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 48707975 - 48707914
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| |||||    
T  48707975 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaggtcat 48707914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 50276387 - 50276318
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  50276387 caaagtggtcctttaagttttaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtc 50276318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 28264541 - 28264601
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  28264541 tctttaagtttcaaaagtcccaaacaagtccttttaatttttgaatcgtttcaaacaagtc 28264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 11795396 - 11795337
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||| ||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  11795396 cttttagtttcaaaagtcacaaacaagtccttttagtttttgaatcgtttcaaacaagtc 11795337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 17847337 - 17847278
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  17847337 ctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 17847278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 23135248 - 23135189
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||| |||||||| |||||    
T  23135248 ctttaagtttaaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaataagtc 23135189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 31617677 - 31617618
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| || ||||||||||||||||||||||| ||| ||| ||||||||||    
T  31617677 ctttaagtttcaaaagtttcaaacaagtccttttagtttttgaatcgttccaaacaagtc 31617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 39995409 - 39995350
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  39995409 ctttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtc 39995350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 56555125 - 56555200
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata 315  Q
    |||||||||||||| |  ||||||| || ||||||||||| ||| |||||||||||||| ||||||||||| ||||    
T  56555125 tttaagtttcaaagattccaaacaaatctttttagtttttgaatcgtttcaaacaagtcctattgtagataacata 56555200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 56555385 - 56555324
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||| |||||||    
T  56555385 ctttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaagaagtcat 56555324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 37381745 - 37381801
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||  ||||||||||||||||||||| ||| |||||||||||    
T  37381745 ctttaagtttcaaaagtccaaaacaagtccttttagtttttgaatcgtttcaaacaa 37381801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 2055181 - 2055236
Alignment:
Q  243 aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  2055181 aagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 2055236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 19168816 - 19168855
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19168816 attgtagatagcatagttggtaattgcttccttgaactca 19168855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 24623268 - 24623229
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24623268 attgtagatagcatagttggtaattgcttccttgaactca 24623229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 30467249 - 30467190
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||| ||||||||| |||| ||| ||||||||||||||    
T  30467249 ctttaagtttcaaaagtcccaaacaaatccttttagcttttgaatcgtttcaaacaagtc 30467190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 48149398 - 48149457
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||||||||| |||||| ||||| ||| ||||||||||||||    
T  48149398 ctttaagtttcaaaagtcccaaacaagttcttttaatttttgaatcgtttcaaacaagtc 48149457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 40988533 - 40988591
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||| ||| ||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  40988533 tttaaattttaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtc 40988591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 4545227 - 4545166
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||| ||| ||||||||||| || ||||||||||| ||| ||| ||||||||||||    
T  4545227 ctttaagttttaaaagtctcaaacaaatctttttagtttttgaatcgttccaaacaagtcat 4545166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 11795436 - 11795387
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  11795436 ccaaagtggtcctttaagtatcaaaagtctcaaacaagtccttttagttt 11795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 19496338 - 19496297
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  19496338 tcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 19496297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 33452358 - 33452427
Alignment:
Q  230 caaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||||  |  |||||||||| ||||||||||| ||| ||||||||||||||    
T  33452358 caaagtggttctttaagtttcaaaaattccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 33452427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 44490233 - 44490274
Alignment:
Q  254 gtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  44490233 gtctcaaacaagtccttttagtttttgaatcgtttcaaacaa 44490274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 22298418 - 22298473
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| ||| ||| |||||||||||||||||| ||| |||||||||||    
T  22298418 ctttaagtttcaaaagtcccaa-caagtccttttagtttttgaatcgtttcaaacaa 22298473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 25734555 - 25734519
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| ||||||||||||||||||||||||||||||||    
T  25734555 tttaattttggtcaaatgcatctaaaggtcctttaag 25734519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 24622991 - 24623022
Alignment:
Q  184 ttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  24622991 ttttggtcaaatgcatctaaaggtcctttaag 24623022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 33808022 - 33807963
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||||||| ||| ||||||| ||| ||||||||||||||    
T  33808022 ctttaagtttcaaaagttccaaacaagtcatttaagtttttgaatcgtttcaaacaagtc 33807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 39995069 - 39995100
Alignment:
Q  184 ttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  39995069 ttttggtcaaatgcatctaaaggtcctttaag 39995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 297
Target Start/End: Complemental strand, 51371317 - 51371262
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||| ||  |||||||||||||||| ||||| ||| |||||||||||||    
T  51371317 taagtttcaaaagttccaaacaagtccttttaatttttgaatcgtttcaaacaagt 51371262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 8433868 - 8433830
Alignment:
Q  260 aacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  8433868 aacaagtccttttagtttttgaatcgtttcaaacaagtc 8433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 215
Target Start/End: Complemental strand, 9339452 - 9339422
Alignment:
Q  185 tttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||    
T  9339452 tttggtcaaatgcatctaaaggtcctttaag 9339422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 17847458 - 17847420
Alignment:
Q  178 ttttattttt-ggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  17847458 ttttatttttaggtcaaatgcatctaaaggtcctttaag 17847420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 19168764 - 19168810
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  19168764 caaagtggtcctttaagttttaaaagtctcaaacaagtccttttagt 19168810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 44490080 - 44490118
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  44490080 ctttaagtttcaaaagtctcaaacaagtcctttaagttt 44490118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Original strand, 11795058 - 11795087
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||    
T  11795058 ttggtcaaatgcatctaaaggtcctttaag 11795087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 19496475 - 19496442
Alignment:
Q  182 atttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| ||||||||||||||||||||||||||||    
T  19496475 attttaggtcaaatgcatctaaaggtcctttaag 19496442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 20534387 - 20534338
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||| |||||    
T  20534387 ccaaagtggtcctttaagtttcaaaagtctcaaacaattcctttaagttt 20534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 22298331 - 22298364
Alignment:
Q  182 atttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| ||||||||||||||||||||||||||||    
T  22298331 attttaggtcaaatgcatctaaaggtcctttaag 22298364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 24623319 - 24623274
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||    
T  24623319 aaagtggtcatttaagtttcaaaagtctcaaataagtccttttagt 24623274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 215
Target Start/End: Original strand, 31208564 - 31208593
Alignment:
Q  186 ttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||    
T  31208564 ttggtcaaatgcatctaaaggtcctttaag 31208593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 31617707 - 31617649
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| |||||| ||||||||||| |||||  |||  ||||||||||||||    
T  31617707 tctttaagtttcaaaagtctcatacaagtcctttaagtttcaaaa--gtttcaaacaagtc 31617649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 32118573 - 32118622
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  32118573 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 32118622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 33693577 - 33693516
Alignment:
Q  238 tctttaagtttcaaaggtctcaa-acaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| ||| | ||||||||||||||||| ||| ||||||||| ||||    
T  33693577 tctttaagtttcaaaagtcccaagaaaagtccttttagtttttgaatcgtttcaaactagtc 33693516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 50542596 - 50542535
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||   ||| ||||||||| |||||| ||||| ||| ||||||||||||||||    
T  50542596 ctttaagtttcagcagtcccaaacaagttcttttattttttgaatcgtttcaaacaagtcat 50542535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 50542636 - 50542587
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||| |||||    
T  50542636 ccaaagtggtcctttaaatttcaaaagtctcaaacaagtcctttaagttt 50542587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 24458537 - 24458565
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  24458537 tggtcaaatgcatctaaaggtcctttaag 24458565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Complemental strand, 32118939 - 32118911
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  32118939 tggtcaaatgcatctaaaggtcctttaag 32118911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 51371271 - 51371231
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||| |||||||||||| ||| |||||||||||||    
T  51371271 tcaaacaagttcttttagtttttgaatcgtttcaaacaagt 51371231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 141)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 12143264 - 12143153
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||    
T  12143264 ccaaagtcgtctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgct 12143165  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  12143164 tccttgaactca 12143153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 19315832 - 19315721
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19315832 caaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgct 19315733  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  19315732 tccttgaactca 19315721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 7552976 - 7553076
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  7552976 tttaagtttcaaaggtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttccttgaactc 7553075  T
Q  340 a 340  Q
    |    
T  7553076 a 7553076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 38473574 - 38473686
Alignment:
Q  229 ccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  38473574 ccaaagtggtactttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatatcatagttggtaattgc 38473673  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  38473674 ttccttgaactca 38473686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 23767365 - 23767474
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  23767365 aaagtggtcctttaagtttcaaaagtctcaaacaa-tccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgctt 23767463  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  23767464 ccttgaactca 23767474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 36781122 - 36781232
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||    
T  36781122 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagatatcatagttggtaattgctt 36781221  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  36781222 ccttgaactca 36781232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 46051684 - 46051531
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  46051684 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 46051585  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  46051584 ttcaaacaagtcctgttgtagatagcatagttggtaattgcttccttgaactca 46051531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 26549570 - 26549469
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  26549570 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgttttaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 26549471  T
Q  339 ca 340  Q
    ||    
T  26549470 ca 26549469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 46825713 - 46825612
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46825713 ctttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagtcctattgtagatagcataattggtaattgcttccttgaact 46825614  T
Q  339 ca 340  Q
    ||    
T  46825613 ca 46825612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 49094670 - 49094771
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  49094670 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 49094769  T
Q  339 ca 340  Q
    ||    
T  49094770 ca 49094771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 50690125 - 50690024
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  50690125 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttcattgaact 50690026  T
Q  339 ca 340  Q
    ||    
T  50690025 ca 50690024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 5401063 - 5400951
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||| |||  ||||||||||||| |||||||||||||||| |||||||||||    
T  5401063 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcttttcaaacaagtcctattgtagatagcatagttggtaattgc 5400964  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  5400963 ttccttgaactca 5400951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 33325920 - 33325808
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||    
T  33325920 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgc 33325821  T
Q  328 ttccttgaactca 340  Q
    |||||| ||||||    
T  33325820 ttccttaaactca 33325808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 36157626 - 36157737
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  36157626 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcataattgg-aattgc 36157724  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  36157725 ttccttgaactca 36157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 7651897 - 7651743
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattg 285  Q
    |||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| ||| |    
T  7651897 tggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcg 7651798  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  7651797 tttcaaacaagtcatattgtagatagcatagttgataattgcttcattgaactca 7651743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 21929717 - 21929607
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||  |||||||||||||||| |||||||||||||    
T  21929717 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaagttctattgtagatagcatagttggtaattgctt 21929618  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  21929617 ccttgaactca 21929607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 340
Target Start/End: Original strand, 28425270 - 28425423
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  28425270 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 28425369  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  28425370 ttcaaacaagtcctattgcagatagcatagttggtaattgcttccttgaactca 28425423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 33674200 - 33674098
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  33674200 tctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtgtcaaacaagtcctattgtagatagcatagctggtaattgcttccttgaac 33674101  T
Q  338 tca 340  Q
    |||    
T  33674100 tca 33674098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 338
Target Start/End: Original strand, 44978716 - 44978826
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||| |||||||    
T  44978716 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcagaatgtagatagcataattgataattgc 44978815  T
Q  328 ttccttgaact 338  Q
    |||||||||||    
T  44978816 ttccttgaact 44978826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 340
Target Start/End: Original strand, 48802230 - 48802391
Alignment:
Q  180 ttatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttt 278  Q
    ||||||| ||||||||||||||||||||||||||||              |||||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  48802230 ttattttaggtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttt 48802329  T
Q  279 taaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    | ||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  48802330 tgaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttcattgaactca 48802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 242 - 340
Target Start/End: Complemental strand, 49814479 - 49814381
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  49814479 taagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaataagtcatattctagatagcatagttggtaattgcttccttgaactca 49814381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 24204429 - 24204530
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||| ||| |||||||||||||||||||||| | | |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  24204429 tctttaagtttcaaaagtcccaaacaagtccttttagtttttgagtcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaac 24204528  T
Q  338 tc 339  Q
    ||    
T  24204529 tc 24204530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 52067611 - 52067711
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  52067611 tttaaatttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatgttgtagatggcataatttgtaattgcttccttgaactc 52067710  T
Q  340 a 340  Q
    |    
T  52067711 a 52067711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 9962943 - 9962832
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||  | |||||||||||||| ||||||||||||    
T  9962943 caaagtggtcctttaagtttcaaaagtctcaaagaagtccttttagtttttgaatcgtttcaaacaagttctgttgtagatagcatagttggtaattgct 9962844  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  9962843 tccttgaactca 9962832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 19274739 - 19274640
Alignment:
Q  241 ttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  19274739 ttaagtttcaaaagtcccaaacaagtccttttagtttttaaatcgtttcaaacaagtcctattgtagataacatagctggtaattgcttccttgaactca 19274640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 18892519 - 18892410
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    ||||| |||||||||||||||| ||  |||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  18892519 aaagttgtctttaagtttcaaaagttccaaaaaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttc 18892420  T
Q  331 cttgaactca 340  Q
     |||||||||    
T  18892419 tttgaactca 18892410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 25988230 - 25988331
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  25988230 ctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattggttccttgaact 25988329  T
Q  339 ca 340  Q
    ||    
T  25988330 ca 25988331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 26070074 - 26069973
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||| || |||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  26070074 ctttaagtttcaaaagtctcaaagaaatccttttagtttttgaatcgtttcaaacaagtcatattgtagatatcatagttggtaattgtttccttgaact 26069975  T
Q  339 ca 340  Q
    ||    
T  26069974 ca 26069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 37217078 - 37216977
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  37217078 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaact 37216979  T
Q  339 ca 340  Q
    ||    
T  37216978 ca 37216977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 40721525 - 40721424
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||| ||| ||||||||| ||||||||    
T  40721525 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttccaacaagtcctattgtagatagcatagttgataattgctttcttgaact 40721426  T
Q  339 ca 340  Q
    ||    
T  40721425 ca 40721424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 9878732 - 9878844
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||| |||| |||||||||||| ||| ||||||||||||||||||||||||||  ||| |||||||||||    
T  9878732 ccaaagtggtcatttaagtttcaaaagtcccaaataagttcttttagtttttgaatcgtttcaaacaagtcatattgtagataaaatagttggtaattgc 9878831  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  9878832 ttccttgaactca 9878844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 229 - 336
Target Start/End: Complemental strand, 18917717 - 18917609
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||  |||||||    
T  18917717 ccaaagtggtcctttaagtttcataagtctcaaacaagtccttttagttttttaatcgtttcaaacaaatcatattgtagatagcatatttaataattgc 18917618  T
Q  328 ttccttgaa 336  Q
    |||||||||    
T  18917617 ttccttgaa 18917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 23228154 - 23228254
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||| | |||||||||||||||||||| ||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  23228154 tttaagtttcaaaagtccctaacaagtccttttagtttttgaatcgtttcaaacaagtactattgtagatagcatagttggtaattgcttccttgaactc 23228253  T
Q  340 a 340  Q
    |    
T  23228254 a 23228254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 7608716 - 7608826
Alignment:
Q  230 caaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||||||||| |||||||  || |||||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||| ||| |||||||||    
T  7608716 caaagtggtctttaaatttcaaaaatcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattatagatagcatagttgataattgctt 7608815  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  7608816 ctttgaactca 7608826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 16706061 - 16705951
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| |||||||||||||  | ||||||||||||||||||||||| ||| |||||||||||||| |||| |||||| |||| |||||||||||||    
T  16706061 aaagtggtcctttaagtttcaaaaatttcaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattttagataacatagttggtaattgctt 16705962  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  16705961 ccttgaactca 16705951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 6711622 - 6711521
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||  ||||| ||| |||||||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  6711622 ctttaagtttcaaaagtctcaaacaagtcctttttatttttgaatcgtttcaaacaagtcatattgtagacattatagttggtaattgcttccttgaact 6711523  T
Q  339 ca 340  Q
    ||    
T  6711522 ca 6711521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 21965247 - 21965146
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||| || ||||    
T  21965247 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatgacataattggtaattgcttcattaaact 21965148  T
Q  339 ca 340  Q
    ||    
T  21965147 ca 21965146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 25800823 - 25800723
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||  ||||||||||||||||||||||    
T  25800823 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagataacat-gttggtaattgcttccttgaact 25800725  T
Q  339 ca 340  Q
    ||    
T  25800724 ca 25800723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 43396857 - 43396756
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| || || ||||||||||| | ||| ||||||||||||||||||    
T  43396857 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaaatcctactgtagatagcagagttgataattgcttccttgaact 43396758  T
Q  339 ca 340  Q
    ||    
T  43396757 ca 43396756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 45670434 - 45670547
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata-attggtaattg 326  Q
    ||||||||||| ||||||||||||| ||| |||| ||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||  ||||||||||    
T  45670434 ccaaagtggtcctttaagtttcaaaagtcccaaataagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagtttggtaattg 45670533  T
Q  327 cttccttgaactca 340  Q
    ||||||||||||||    
T  45670534 cttccttgaactca 45670547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 46095034 - 46095135
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  |  |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  46095034 ctttaagtttcaaaaattccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgtttccttgaact 46095133  T
Q  339 ca 340  Q
    ||    
T  46095134 ca 46095135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 52147186 - 52147074
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||| |||||||  ||||||||||||||||||| ||||| ||| |||||||||||||||| ||||| |||||||| || ||||||||    
T  52147186 ccaaagtggtcctttaaatttcaaaaatctcaaacaagtccttttaatttttgaatcgtttcaaacaagtcatgttgtatatagcatagtttgtaattgc 52147087  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  52147086 ttcattgaactca 52147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 18782038 - 18782149
Alignment:
Q  230 caaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||||||||||| |||  |||||||||||||||||| ||||||||||| ||| ||||||||    
T  18782038 caaagtggttctttatgtttcaaaagtcccaaacaagtccttttagtttttgaatcatttcaaacaagtcatattctagatagcatagttgataattgct 18782137  T
Q  329 tccttgaactca 340  Q
    |  |||||||||    
T  18782138 tatttgaactca 18782149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 48669373 - 48669456
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  48669373 tcaaacaagtccttttaatttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtgattgcttccttgaactca 48669456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 45350676 - 45350775
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||  | ||||||||||| |||| ||||||||||||||||||| ||    
T  45350676 ctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaacaa--cctattgtagataacatagttggtaattgcttccttgatct 45350773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 258 - 340
Target Start/End: Complemental strand, 50533546 - 50533464
Alignment:
Q  258 caaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| |||||| |||| |||||||||||||| |||||||||    
T  50533546 caaacaagtccttttagtttttaaatcgtttcaaacaagtcctattatagataacatagttggtaattgcttcattgaactca 50533464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 41982195 - 41982295
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| |||||| | |||||||||||||||||  || |||||||||||||||||||||||||| |||| ||| ||||| |||| ||||||||    
T  41982195 tttaagtttcaaaagtctcatataagtccttttagtttttgcatcgtttcaaacaagtcatattgtagataacatagttgataattacttctttgaactc 41982294  T
Q  340 a 340  Q
    |    
T  41982295 a 41982295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 41106168 - 41106097
Alignment:
Q  269 ttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41106168 ttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 41106097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 48319297 - 48319227
Alignment:
Q  230 caaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  48319297 caaagtggtctttaagtttcaattgtctcaaacaagtccttttagtttttgaattgcttcaaacaagtcat 48319227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 340
Target Start/End: Original strand, 8141450 - 8141546
Alignment:
Q  243 aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| ||  |||||||||  ||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  8141450 aagtttcaaaagttccaaacaagtt-ttttagtttttgaatcgtttcaaacaagtcctattgtagatagcataatttgtaattgcttctttgaactca 8141546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 33714310 - 33714421
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| |||| |||||||| ||| |||||||||| || |||||||| ||| ||||||||||| || ||||||||||| |||| ||| |||||| |    
T  33714310 caaagtggtcatttatgtttcaaatgtcccaaacaagtctttctagtttttgaatcgtttcaaacaaatcctattgtagataacatagttgataattgtt 33714409  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  33714410 tccttgaactca 33714421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 340
Target Start/End: Original strand, 52349909 - 52349984
Alignment:
Q  265 gtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||    
T  52349909 gtccttttagtttttgaatcgtttcaaacaagtcctattgtaaatagcatagttggtaattgcttccttaaactca 52349984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 45670737 - 45670667
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  45670737 aaagtggtcatttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 45670667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 50099119 - 50099180
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  50099119 ctttaagtttcaaaagtctcaaacaagaccttttagtttttaaatcgtttcaaacaagtcat 50099180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 33325615 - 33325687
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  33325615 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaaatcat 33325687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 18782331 - 18782272
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  18782331 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 18782272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 24204712 - 24204654
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  24204712 ctttaagtttcaaag-tctcaaacaagtccttttagtttttgaattgtttcaaacaagtc 24204654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 37216794 - 37216853
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  37216794 tctttaagtttcaaaagtctcaaacaagtcattttagtttttgaattgtttcaaacaagt 37216853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 17983848 - 17983958
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| || ||||||| |||| ||||||||||||||| ||||| ||| ||||||| |||||| || |||| ||| |||| || ||||||||||    
T  17983848 aaagtggtcttttaaatttcaaaagtcttaaacaagtccttttaatttttgaatcgtttcaaccaagtcctaatgtaaataacatagtttgtaattgctt 17983947  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  17983948 ctttgaactca 17983958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 18892229 - 18892287
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  18892229 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 18892287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 19315528 - 19315598
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||    
T  19315528 ccaaagtggtcctttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtc 19315598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 22351029 - 22351138
Alignment:
Q  185 tttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaat 283  Q
    |||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| |||    
T  22351029 tttggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaat 22351128  T
Q  284 tgtttcaaac 293  Q
    ||||||||||    
T  22351129 tgtttcaaac 22351138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 25988512 - 25988454
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  25988512 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 25988454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 40721239 - 40721309
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||    
T  40721239 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttctgaatcgtttcaaacaagtc 40721309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 43396574 - 43396635
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  43396574 ctttaagttttaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 43396635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 50533282 - 50533343
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  50533282 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaaaaagtcat 50533343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 7651558 - 7651618
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  7651558 tctttaaatttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 7651618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 41982477 - 41982417
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  41982477 tttaaatttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 41982417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 23767656 - 23767597
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||    
T  23767656 ctttaagtttcaaaagtctcaaataagtccttttagtttttgaatcgtttcaaacaagtc 23767597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 52146835 - 52146953
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaa 281  Q
    |||||||||||||||||||||| ||||||||||             ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| |    
T  52146835 tttttggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaaaagtcccaaacaagtcattttagtttttga 52146934  T
Q  282 attgtttcaaacaagtcat 300  Q
    || ||||||||| ||||||    
T  52146935 atcgtttcaaactagtcat 52146953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 52350166 - 52350107
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  52350166 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 52350107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 9974742 - 9974800
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||    
T  9974742 tttaagtttcaaaagttccaaacaagtccttttagtttttaaatcgtttcaaacaagtc 9974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 12964545 - 12964603
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||    
T  12964545 ctttaagtttcaaaagtctcaaacaagttcttttaatttttgaattgtttcaaacaagt 12964603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 28425604 - 28425546
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  28425604 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 28425546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 46095316 - 46095258
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||    
T  46095316 tttaagtttcaaaaatctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 46095258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 38473868 - 38473807
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||||||    
T  38473868 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaactagtcat 38473807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 44979430 - 44979369
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||||||||||||| | ||| ||||||||||||||||    
T  44979430 ctttaagtttcaaaagtcccaaacaagtccttttagtttatgaatcgtttcaaacaagtcat 44979369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 49094952 - 49094895
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  49094952 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagt 49094895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 9962658 - 9962718
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  9962658 tctttaagtttcaaaagtctcaaacacgtccttttagtttttgaatcgtttcaaactagtc 9962718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 36781423 - 36781355
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  36781423 aaagtggtcctttaagtttcaaaagtcccaaacaagtccttttaatttttgaatcgtttcaaacaagtc 36781355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 5400770 - 5400829
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||| |||||||| |||||    
T  5400770 ctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttcaaagaagtc 5400829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 7609008 - 7608949
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  7609008 ctttaagtttcaacagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 7608949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 8141728 - 8141669
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||||||||  ||| ||||||||||||||    
T  8141728 ctttaagtttcaaaagtcccaaacaagtccttttagttttcgaatcgtttcaaacaagtc 8141669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 9879026 - 9878967
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  9879026 ctttaagtttcaaaagtcccaaacaagtccttttaatttttgaatcgtttcaaacaagtc 9878967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 16505199 - 16505250
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaac 293  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  16505199 taagtttcaaaagtcccaaacaagtccttttagtttttgaattgtttcaaac 16505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 17990009 - 17989950
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| ||||||| |||  ||||||||||||||||||||| ||||||||||||||||||    
T  17990009 ctttaaatttcaaaagtcctaaacaagtccttttagtttttgaattgtttcaaacaagtc 17989950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 26069791 - 26069850
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  26069791 ctttaaatttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 26069850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 32373795 - 32373736
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||  |||||||||||||    
T  32373795 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcttttcaaacaagtc 32373736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 46825399 - 46825458
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| | |||||||||||||||||| ||||| ||| ||||||||||||||    
T  46825399 ctttaagtttcaaaagactcaaacaagtccttttaatttttgaatcgtttcaaacaagtc 46825458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 49973845 - 49973900
Alignment:
Q  243 aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||    
T  49973845 aagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaagtc 49973900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 6711342 - 6711400
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||| ||||||||||| || ||||||||||| ||| ||||||||||||||||    
T  6711342 taagtttcaaaagtctcaaacaaatcattttagtttttgaatcgtttcaaacaagtcat 6711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 7553269 - 7553199
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||| ||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  7553269 ccaaagtggtcctttaattttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 7553199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 12142963 - 12143017
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaa 292  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||    
T  12142963 tctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaa 12143017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 16705758 - 16705828
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| | | |||||||||||||| ||||||| ||| ||||||||||||||    
T  16705758 ccaaagtggtcatttaagtttcaaaagccacaaacaagtcctttaagtttttgaatcgtttcaaacaagtc 16705828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 23228435 - 23228377
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  23228435 tttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 23228377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 33673905 - 33673975
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||| ||| ||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  33673905 ccaaagtggtcctttaagttttaaaagtcccaaacaagttcttttagtttttgaatcgtttcaaacaagtc 33673975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 25800542 - 25800591
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgttt 288  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  25800542 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgttt 25800591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 52067896 - 52067835
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||| |||||| ||  |||||||||||||||||||||| ||| ||||||||||||||||    
T  52067896 ctttaagattcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 52067835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 9974963 - 9974923
Alignment:
Q  300 tattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  9974963 tattgtagatagcatagttggtaattgcttccttgaactca 9974923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 34970982 - 34971038
Alignment:
Q  242 taagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  34970982 taagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 34971038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 303
Target Start/End: Complemental strand, 12964813 - 12964750
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatatt 303  Q
    ||||||||||||| ||| ||||||||| |||||||||||| ||| | |||||||||||| ||||    
T  12964813 tttaagtttcaaaagtcccaaacaagttcttttagtttttgaatcgattcaaacaagtcctatt 12964750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 16506809 - 16506848
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  16506809 attgtagatagcatagttggtaattgcttccttgaactca 16506848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 293
Target Start/End: Complemental strand, 16508222 - 16508117
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| ||||||||||||||||| |||| ||||||    
T  16508222 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttag-ttttgaattgt 16508124  T
Q  287 ttcaaac 293  Q
    |||||||    
T  16508123 ttcaaac 16508117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 18917431 - 18917482
Alignment:
Q  247 ttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  18917431 ttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 18917482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 30281751 - 30281712
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30281751 attgtagatagcatagttggtaattgcttccttgaactca 30281712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 34971228 - 34971161
Alignment:
Q  273 agtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||| ||| |||||||||||||| || |||||||| |||| |||||||||| ||| |||||||||    
T  34971228 agtttttgaatcgtttcaaacaagtcctaatgtagataacatagttggtaattgtttctttgaactca 34971161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 48669638 - 48669579
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||| |||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  48669638 ctttatgtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 48669579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 50689843 - 50689901
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||    
T  50689843 ctttaagtttcaaaagtcccaa-caagtccttttagtttttgaatcgtttcaaacaagtc 50689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 26549287 - 26549345
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||| ||||||| | | |||||||||||||||||||||| ||| |||||||||||||    
T  26549287 ctttaaatttcaaaagccacaaacaagtccttttagtttttgaatcgtttcaaacaagt 26549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 45350955 - 45350897
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||  ||||||||||| ||| ||||||||||||||    
T  45350955 tttaagtttcaaaagtcccaaacaagtttttttagtttttgaatcgtttcaaacaagtc 45350897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 46051338 - 46051408
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| ||| |||| ||| ||||||||||||| ||| ||||||||| ||||    
T  46051338 ccaaagtggtcctttaagtttcaaaagtcccaaataaggccttttagtttttgaatcgtttcaaactagtc 46051408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 46825448 - 46825489
Alignment:
Q  257 tcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  46825448 tcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 46825489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 49974016 - 49973971
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaatt 284  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||    
T  49974016 ctttaagtttcaaaagtttcaaacaagtccttttagtttttgaatt 49973971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 8141767 - 8141719
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  8141767 ccaaagtggtttttaagtttcaaaagtcccaaacaagtcctttaagttt 8141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 18782421 - 18782385
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18782421 tttatttttggtcaaatgcatctaaaagtcctttaag 18782385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 21929330 - 21929366
Alignment:
Q  178 ttttatttttggtcaaatgcatctaaaggtcctttaa 214  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21929330 ttttattttcggtcaaatgcatctaaaggtcctttaa 21929366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 24036660 - 24036700
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttttt 279  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  24036660 ctttaagtttcaaaagtcccaaacaagtccttttagttttt 24036700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 12964515 - 12964554
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  12964515 tctttaagtttcaaaagtctcaaacaagtcctttaagttt 12964554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 19274458 - 19274517
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||| |||||||| ||| |||| ||||||||||||||||  ||| ||||||||||||||    
T  19274458 ctttatgtttcaaaagtcccaaataagtccttttagttttcgaatcgtttcaaacaagtc 19274517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 298
Target Start/End: Original strand, 21964953 - 21965023
Alignment:
Q  230 caaagtggtc--tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||  ||||||||||||| ||||||| ||| |||||||||||||  ||| |||||||| |||||    
T  21964953 caaagtggtccttttaagtttcaaaagtctcaatcaaatccttttagttttcgaatcgtttcaaataagtc 21965023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 24204797 - 24204766
Alignment:
Q  184 ttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  24204797 ttttggtcaaatgcatctaaaggtcctttaag 24204766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 33194672 - 33194711
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  33194672 attgtagatagcatagttggtagttgcttccttgaactca 33194711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 215
Target Start/End: Original strand, 41105830 - 41105861
Alignment:
Q  184 ttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||||||||||||||||||||||||||||||    
T  41105830 ttttggtcaaatgcatctaaaggtcctttaag 41105861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 48319067 - 48319106
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  48319067 attgtatatagcatagttggtaattgcttccttgaactca 48319106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 49814199 - 49814258
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||  |||||||||  ||||||||||| ||| ||||||||||||||    
T  49814199 ctttaagtttcaaaagttccaaacaagttattttagtttttgaatcgtttcaaacaagtc 49814258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 25800450 - 25800551
Alignment:
Q  177 cttttatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagt 275  Q
    |||||| || |||||||||| ||||||||||||||||||             ||||||| |||||| |||||||||| |||||||||||||||||| |||    
T  25800450 cttttacttatggtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcttttaagtttcaaaagtctcaaacaagtcctttaagt 25800549  T
Q  276 tt 277  Q
    ||    
T  25800550 tt 25800551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #127
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 25988543 - 25988509
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtcctttta 273  Q
    |||||||||||||| ||||||||||||||||||||    
T  25988543 ctttaagtttcaaaagtctcaaacaagtcctttta 25988509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #128
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 52067935 - 52067893
Alignment:
Q  230 caaagtggt-ctttaagtttcaaaggtctcaaacaagtccttt 271  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  52067935 caaagtggttctttaagtttcaaaagtctcaaacaagtccttt 52067893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #129
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 21929421 - 21929478
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||||||| ||  || |||| |||||||||||||| ||| |||||||||||||    
T  21929421 tttaagtttcaaaagttccagacaaatccttttagtttttgaatcgtttcaaacaagt 21929478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #130
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 33714600 - 33714543
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||| ||||||| ||  |||||||||||| ||||||||| ||| |||||||||||||    
T  33714600 tttaaatttcaaaagttccaaacaagtcctcttagtttttgaatcgtttcaaacaagt 33714543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #131
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 45350985 - 45350952
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtcctttta 273  Q
    ||||||||||||| ||||||||||||||||||||    
T  45350985 tttaagtttcaaaagtctcaaacaagtcctttta 45350952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #132
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 50099079 - 50099128
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  50099079 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 50099128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #133
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 50533242 - 50533291
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| |||||||| |||| |||||||||||||||||| |||||    
T  50533242 ccaaagtggtcatttaagttacaaaagtctcaaacaagtcctttaagttt 50533291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #134
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 17990038 - 17990006
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttt 271  Q
    |||||||||||||| ||||||||||||||||||    
T  17990038 ctttaagtttcaaaagtctcaaacaagtccttt 17990006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #135
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 18781995 - 18782023
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  18781995 tggtcaaatgcatctaaaggtcctttaag 18782023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #136
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 18917334 - 18917370
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  18917334 tttatgtttggtcaaatgcatctaaagatcctttaag 18917370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #137
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 19274376 - 19274404
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  19274376 tggtcaaatgcatctaaaggtcctttaag 19274404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #138
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 23228475 - 23228427
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  23228475 caaagtggtcctttaagtttcaaaagtctcaaacaagtcatttaagttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #139
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 26549201 - 26549233
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| ||||||||||||||||||||||||||||    
T  26549201 ttttaggtcaaatgcatctaaaggtcctttaag 26549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #140
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 37217135 - 37217103
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| ||||||||||||||||||||||||||||    
T  37217135 ttttaggtcaaatgcatctaaaggtcctttaag 37217103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #141
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 38473907 - 38473859
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  38473907 caaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 38473859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 118)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 35346421 - 35346531
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  35346421 aaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgctt 35346520  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  35346521 ccttgaactca 35346531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 20760030 - 20760131
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20760030 ctttaagtttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgcttccttgaact 20760129  T
Q  339 ca 340  Q
    ||    
T  20760130 ca 20760131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 27070698 - 27070799
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  27070698 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaact 27070797  T
Q  339 ca 340  Q
    ||    
T  27070798 ca 27070799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 20813389 - 20813501
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||    
T  20813389 ccaaagtggtcctttaagtttcaaaagtcctaaacaagtccttttagtttttgaatcgtttcaaacaagtcataatgtagatagcataattggtaattgc 20813488  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  20813489 ttccttgaactca 20813501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 41251079 - 41250967
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||     
T  41251079 ccaaagtggtcctttaagtttcaaaggtcccaaataagtccttttagtttttgaattgtttcaaacaagtcttattgtagatagcatagttggtaattgt 41250980  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  41250979 ttccttgaactca 41250967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 340
Target Start/End: Complemental strand, 21656752 - 21656599
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  21656752 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 21656653  T
Q  287 ttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  21656652 ttcaaacaagtcctattgtatatagcatagttggtaattgcttccttgaactca 21656599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 26455773 - 26455663
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  26455773 aaagtggtcctttaagtttcaaaagtctcaaccaagtccttttagtttttgaatcgtttcaaacaagtcatgttgtagatagcatagttggtaattgctt 26455674  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  26455673 ccttgaactca 26455663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 40922115 - 40922225
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||| |||    
T  40922115 aaagtggtcttttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcgtattgtagatagcatagttggtaattactt 40922214  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  40922215 ccttgaactca 40922225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 31122844 - 31122743
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31122844 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcttattgtagatagcatagttggtaattgcttccttgaact 31122745  T
Q  339 ca 340  Q
    ||    
T  31122744 ca 31122743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 21564689 - 21564577
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  21564689 ccaaagtggtcctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 21564590  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  21564589 ttccttgaactca 21564577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 20086263 - 20086374
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||| |||| ||||||||||| ||||||||||||    
T  20086263 caaagtggtcctttaagtttcaaaagtctcaaacaagttcttttagtttttgaatcgtttcaaacaagtcctattatagatagcatacttggtaattgct 20086362  T
Q  329 tccttgaactca 340  Q
    ||||||||||||    
T  20086363 tccttgaactca 20086374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 47329125 - 47329235
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||| ||||| |||||||||||| |||||||||||| |||||||||||||    
T  47329125 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttaatttttgaatcgtttccaacaagtcatatcgtagatagcatagttggtaattgctt 47329224  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  47329225 ccttgaactca 47329235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 1687833 - 1687732
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  1687833 ctttaagtttcaaaagtttcaaacaagtccttttaatttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 1687734  T
Q  339 ca 340  Q
    ||    
T  1687733 ca 1687732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 42017063 - 42016954
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttc 330  Q
    |||||||||||||| ||||||| || ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  42017063 aaagtggtctttaaatttcaaaagtttcaaacaggtccttttagtttttgaatcgtttcaaacaagtcatattgtagataacatagttggtaattgcttc 42016964  T
Q  331 cttgaactca 340  Q
     |||||||||    
T  42016963 attgaactca 42016954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 55164074 - 55164175
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  55164074 ctttaagtttcaaaagtctcaaacaagtcattttaatttttgaattgtttcaaataagtcatattgtagatagcatagttgctaattgcttccttgaact 55164173  T
Q  339 ca 340  Q
    ||    
T  55164174 ca 55164175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 44798460 - 44798348
Alignment:
Q  229 ccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||    
T  44798460 ccaaagtggtgctttaagtttcaaaattctcatacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgc 44798361  T
Q  328 ttccttgaactca 340  Q
    || ||||||||||    
T  44798360 tttcttgaactca 44798348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 239 - 338
Target Start/End: Complemental strand, 33151878 - 33151779
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  33151878 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgcttccttgaact 33151779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 37248147 - 37248037
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||| |||||||||||||    
T  37248147 aaagtggtcctttaagtttcaaaagtctcaaacaagtacttttagtttttgaatcgtttcaaacaagtcctattgtagataacatagttggtaattgctt 37248048  T
Q  330 ccttgaactca 340  Q
    | |||||||||    
T  37248047 cattgaactca 37248037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 1017226 - 1017125
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| || ||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  1017226 ctttaagtttcaaaagtcccatacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaact 1017127  T
Q  339 ca 340  Q
    ||    
T  1017126 ca 1017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 42107058 - 42107159
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||    
T  42107058 ctttaagtttcaaaagtcacaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatagtatagttggtaattacttccttgaact 42107157  T
Q  339 ca 340  Q
    ||    
T  42107158 ca 42107159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 38446669 - 38446557
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||| ||| ||  |||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  38446669 ccaaagtggtcctttaagttttaaaagttccaaagaagtgcttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgc 38446570  T
Q  328 ttccttgaactca 340  Q
    |||||||||||||    
T  38446569 ttccttgaactca 38446557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 21890352 - 21890251
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||  |||||||||||||||||||||| ||| |||||||||||||| |||| |||||| |||| ||||||||||||||||||||||    
T  21890352 ctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattatagataacatatttggtaattgcttccttgaact 21890253  T
Q  339 ca 340  Q
    ||    
T  21890252 ca 21890251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 50287748 - 50287647
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||||| ||||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||| || ||||    
T  50287748 ctttaagtttcaaaagtctcatacaagtcattttagtttttgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgcttcattaaact 50287649  T
Q  339 ca 340  Q
    ||    
T  50287648 ca 50287647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 20913702 - 20913814
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||||||||||| || ||||||||||| ||| |||||||||||||  |||||||||||||||| ||| |||||||    
T  20913702 ccaaagtggtcatttaagtttcaaaagtctcaaacaaatctttttagtttttgaatcgtttcaaacaagttctattgtagatagcatagttgataattgc 20913801  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  20913802 ttctttgaactca 20913814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 20921820 - 20921932
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| ||||||||||| || ||||||||||| ||| |||||||||||||  |||||||||||||||| ||| |||||||    
T  20921820 ccaaagtggtcatttaagtttcaaaagtctcaaacaaatctttttagtttttgaatcgtttcaaacaagttctattgtagatagcatagttgataattgc 20921919  T
Q  328 ttccttgaactca 340  Q
    ||| |||||||||    
T  20921920 ttctttgaactca 20921932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 340
Target Start/End: Complemental strand, 29677716 - 29677557
Alignment:
Q  182 atttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttttta 280  Q
    ||||||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| ||||||||||| ||||||||||     
T  29677716 atttttggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccgtttagtttttc 29677617  T
Q  281 aattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||| |||||||||| ||| ||| ||||||| |||| || |||||||||||||||||||||    
T  29677616 aatcgtttcaaacaggtcctatcgtagatatcatagtttgtaattgcttccttgaactca 29677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 35608091 - 35608191
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    |||||||||||||  | ||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  35608091 tttaagtttcaaaaatgtcaaacaagtcattttagtttttgaatcgtttcaaataagtcctattgtagatagcataattggtaattggttccttgaactc 35608190  T
Q  340 a 340  Q
    |    
T  35608191 a 35608191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 48651429 - 48651329
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||| ||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| || ||||||||||||| ||||||||||||||||| |||||    
T  48651429 tttaaatttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaacaagtcctaatgtagatagcatagttggtaattgcttccttaaactc 48651330  T
Q  340 a 340  Q
    |    
T  48651329 a 48651329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 19664731 - 19664622
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| |||||||||||||  | ||||| ||||| ||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  19664731 aaagtggtcctttaagtttcaaaaatttcaaataagtctttttagtttttgaat-gtttcaaacaagtcctattgtagatagcatagttggtaattgctt 19664633  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  19664632 ccttgaactca 19664622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 10618440 - 10618540
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    |||| |||||||| |||  ||||||||||||||||||||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  10618440 tttatgtttcaaaagtcctaaacaagtccttttagtttttgaatcgtttcaaacaagtcctattgtagatgacataattggtaattgcttcattgaactc 10618539  T
Q  340 a 340  Q
    |    
T  10618540 a 10618540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 231 - 338
Target Start/End: Original strand, 38923948 - 38924056
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||| ||| |||||||  ||| |||||||||||||    
T  38923948 aaagtggtcttttaagtttcaaaagtcccaaacaagtcattttagtttttgaattgtttcaaacaagtcctatcgtagataaaatagttggtaattgctt 38924047  T
Q  330 ccttgaact 338  Q
    | |||||||    
T  38924048 cgttgaact 38924056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 33473199 - 33473294
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttga 335  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||| |||| |||||||||| ||||||||    
T  33473199 tttaagtttcaaaaatctcaaacaagtccttttagtttttgaatcgtttcaaacaagttttattgtagataacatagttggtaattgtttccttga 33473294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 22852178 - 22852077
Alignment:
Q  239 ctttaagtttcaa-aggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||| || ||| ||||||||||||||||||||| || | ||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  22852178 ctttaagtttcaacagttct-aaacaagtccttttagtttttgaaatctttcaaataagtcctattgtagatagcatagttggtaattgcttccttgaac 22852080  T
Q  338 tca 340  Q
    |||    
T  22852079 tca 22852077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 32650770 - 32650880
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| || |||||||| || ||||||||||| |||  ||||||||||||  |||| ||||||||||| |||||||||||||    
T  32650770 aaagtggtcctttaagtttcaaaagtttcaaacaattctttttagtttttgaatcatttcaaacaagttctattatagatagcatagttggtaattgctt 32650869  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  32650870 ccttgaactca 32650880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 36314930 - 36315032
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagttttta-aattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||||||||||  |  ||||||| ||||||| ||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  36314930 ctttaagtttcaaaatttccaaacaaatccttttcgttttttgaattgtttcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaac 36315029  T
Q  338 tca 340  Q
    |||    
T  36315030 tca 36315032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 3697328 - 3697231
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaa 336  Q
    |||||||||| ||| |||||||| ||||||||||||||||| |||  ||||||||||||| |||||||||||| ||| |||||||||||||| |||||    
T  3697328 ctttaagttttaaaagtctcaaataagtccttttagtttttgaatcctttcaaacaagtcctattgtagatagtatagttggtaattgcttcattgaa 3697231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 240 - 340
Target Start/End: Original strand, 53925939 - 53926039
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactc 339  Q
    ||||||||||||| ||  |||||||||| ||||||||||| |||  ||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||    
T  53925939 tttaagtttcaaaagttccaaacaagtcattttagtttttgaatcatttcaaataagtcatattgtagatagtatagttggtaattgcttcattgaactc 53926038  T
Q  340 a 340  Q
    |    
T  53926039 a 53926039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 338
Target Start/End: Complemental strand, 39069908 - 39069809
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||| ||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||||||  |||||||| ||| |||||| |||||| ||||    
T  39069908 ctttaaatttcaaaagtctcaaacaaatccttttagtttttgaatcgtttcaaacaagtcatattgttaatagcatagttgataattgtttcctttaact 39069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 340
Target Start/End: Original strand, 52820998 - 52821109
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgct 328  Q
    |||||||||| ||||||||||||| ||  |||||||||| ||||||||||| ||| |||| ||||||||| | ||||||||| |||| ||||||||||||    
T  52820998 caaagtggtcctttaagtttcaaaagttccaaacaagtctttttagtttttgaatcgttttaaacaagtcctgttgtagataacatagttggtaattgct 52821097  T
Q  329 tccttgaactca 340  Q
    || |||||||||    
T  52821098 tctttgaactca 52821109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 51562353 - 51562243
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||| ||||||||| ||||||| |||||||||||| ||||| ||| |||||||||||||  || |||||||| |||| |||||||||| ||    
T  51562353 aaagtggtcctttgagtttcaaaagtctcaagcaagtccttttaatttttgaatcgtttcaaacaagttctaatgtagataacatagttggtaattgttt 51562254  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  51562253 ccttgaactca 51562243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 53196204 - 53196095
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||| || | |||||||| ||||| ||||||||||| |||| |||||||||  ||    
T  53196204 aaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagttttgaa-tcgtttcaaagaagtcttattgtagataacatagttggtaattattt 53196106  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  53196105 ccttgaactca 53196095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 44152856 - 44152772
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggta 322  Q
    ||||||| |||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||| ||||||    
T  44152856 tctttaaatttcaaaaatctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattatagataacatagttggta 44152772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 21890069 - 21890128
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21890069 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaattgtttcaaacaagtc 21890128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 44152598 - 44152660
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  44152598 tctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 44152660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 45380219 - 45380321
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcata-attggtaattgcttccttgaac 337  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||||  ||||||||||||||||  ||| |||||||||| || |||    
T  45380219 ctttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaagttctattgtagatagcatagtttgataattgcttctttaaac 45380318  T
Q  338 tca 340  Q
    |||    
T  45380319 tca 45380321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 39069626 - 39069687
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  39069626 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 39069687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 42016770 - 42016831
Alignment:
Q  237 gtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  42016770 gtctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 42016831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 1448694 - 1448792
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| ||  ||||||||| |||||||||||| ||| |||||||| ||||| ||||||   || |||| ||||||||||||||||||||||    
T  1448694 ctttaagtttcaaaagtaccaaacaagttcttttagtttttgaatcgtttcaaagaagtcctattgt---taccatagttggtaattgcttccttgaact 1448790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12748290 - 12748349
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  12748290 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 12748349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 38446373 - 38446436
Alignment:
Q  237 gtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  38446373 gtctttaagtttcaaaagtctcatacaagtccttttagtttttgaatcgtttcaaacaagtcat 38446436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 50365129 - 50365070
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  50365129 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 50365070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 52821302 - 52821244
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  52821302 tttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 52821244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 19664440 - 19664501
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  19664440 ctttaagtttcaaaagtctcaaataagtccttttagtttttgaatcgtttcaaacaagtcat 19664501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 45380502 - 45380441
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  45380502 ctttaagtttcaaaagtctcaaataagtccttttagtttttgaatcgtttcaaacaagtcat 45380441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 12748524 - 12748472
Alignment:
Q  288 tcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12748524 tcaaacaagtcctattgtagatagcatagttggtaattgcttccttgaactca 12748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 41250786 - 41250846
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  41250786 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 41250846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 50977754 - 50977822
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  50977754 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtc 50977822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 51080886 - 51080954
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||||    
T  51080886 aaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcatttcaaacaagtc 51080954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 1448974 - 1448915
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  1448974 ctttaagttttaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 1448915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 19268421 - 19268479
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  19268421 tttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 19268479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 33473480 - 33473422
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||    
T  33473480 tttaagtttcaaaagtcccaaacaagtcattttagtttttgaattgtttcaaacaagtc 33473422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 37247856 - 37247914
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  37247856 tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 37247914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 51475501 - 51475431
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||    
T  51475501 ccaaagtggtcctttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 51475431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 53195914 - 53195972
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||||    
T  53195914 tttaagtttcaaaagtcctaaacaagtccttttagtttttaaatcgtttcaaacaagtc 53195972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 1016891 - 1016999
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| ||| ||    
T  1016891 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgt 1016990  T
Q  287 ttcaaacaa 295  Q
    |||||||||    
T  1016991 ttcaaacaa 1016999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 21564334 - 21564454
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||| ||| ||||||||||||||||||||||||||||             || ||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  21564334 tttaatttaggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccgaagtggttctttaagtttcaaaagtcccaaacaagttcttttagttt 21564433  T
Q  278 ttaaattgtttcaaacaagtc 298  Q
    || ||| ||||||||||||||    
T  21564434 ttgaatcgtttcaaacaagtc 21564454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 35346707 - 35346646
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| ||| |||||||||||||||| ||||| ||| ||||||||||||||||    
T  35346707 ctttaagtttcaaaagtcccaaacaagtccttttaatttttgaatcgtttcaaacaagtcat 35346646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 47329419 - 47329358
Alignment:
Q  237 gtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||| ||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  47329419 gtctttaaatttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 47329358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 47473129 - 47473190
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||  ||||||||||||||||||||| ||| ||||||||||||||||    
T  47473129 ctttaagtttcaaaagtccaaaacaagtccttttagtttttgaatcgtttcaaacaagtcat 47473190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 55164357 - 55164296
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||| ||||||    
T  55164357 ctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacgagtcat 55164296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 298
Target Start/End: Original strand, 1687498 - 1687609
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgt 286  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| ||||||| |||||||||||||| ||| ||    
T  1687498 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgt 1687597  T
Q  287 ttcaaacaagtc 298  Q
    ||||||||||||    
T  1687598 ttcaaacaagtc 1687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 10618731 - 10618663
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||  ||| ||||||||||||||    
T  10618731 aaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagttttcgaatcgtttcaaacaagtc 10618663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 20760313 - 20760257
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||    
T  20760313 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttaaaacaa 20760257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 20813682 - 20813622
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||||||||||| | |||||||||||| ||| ||||||||||||||||    
T  20813682 tttaagtttcaaaagtctcaaacaaattcttttagtttttgaatcgtttcaaacaagtcat 20813622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 28699573 - 28699641
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaag 296  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||||||||||| ||| ||||||||||||    
T  28699573 ccaaagtggtcctttaagtttcaaaagtcctaaacaagtccttttagtttttgaatcgtttcaaacaag 28699641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 340
Target Start/End: Complemental strand, 19268720 - 19268602
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtag------atagcataattggt 321  Q
    ||||||||||| ||||||||||||| ||| |||||||||  ||||||||||| ||| |||| ||||||||| || |||||      ||| |||| |||||    
T  19268720 ccaaagtggtcctttaagtttcaaaagtcccaaacaagttattttagtttttgaatcgttttaaacaagtcctaatgtagataacaataacatagttggt 19268621  T
Q  322 aattgcttccttgaactca 340  Q
    ||||||||| |||||||||    
T  19268620 aattgcttcattgaactca 19268602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 20086556 - 20086497
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||| ||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  20086556 ctttgagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 20086497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 50287465 - 50287524
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||||||    
T  50287465 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgtttcaaacaagtc 50287524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 3697044 - 3697106
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||| ||  ||||||||| |||||||||||| ||||||||||||||| ||||    
T  3697044 tctttaagtttcaaaagttccaaacaagttcttttagtttttgaattgtttcaaacaaatcat 3697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 27070980 - 27070922
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  || |||||||||||||||||||||| ||| ||||||||||||||    
T  27070980 tttaagtttcaaaaatcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 27070922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 291
Target Start/End: Original strand, 28775426 - 28775487
Alignment:
Q  229 ccaaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaa 291  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| |||||||    
T  28775426 ccaaagtggt-tttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaa 28775487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 36315213 - 36315155
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  36315213 tttaagtttcaaaagtcccaaacaaatccttttagtttttgaatcgtttcaaacaagtc 36315155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 51562062 - 51562116
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaaca 294  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||    
T  51562062 tttaagtttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaaca 51562116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 26455481 - 26455542
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||| ||||||||| ||||||    
T  26455481 ctttaaatttcaaaagtctcaaacaagtctttttagtttttgaatcgtttcaaactagtcat 26455542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 20914087 - 20914051
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  20914087 tttatttttggtcaaatgcatctaaaggtcctttaag 20914051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 20922205 - 20922169
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||||||||    
T  20922205 tttatttttggtcaaatgcatctaaaggtcctttaag 20922169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 31122562 - 31122622
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||||||| ||||    
T  31122562 tttaagtttcaaaagtcccaaacaagtctttttagtttttgaatcgtttcaaacaaatcat 31122622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 34019630 - 34019586
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  34019630 aaagtggtccttaagtttcaaaagtctcaaacaagtccttttagt 34019586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 42107342 - 42107282
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||| |||||| |||||| ||||| | ||||||||||| ||||||||||||||||||    
T  42107342 tctttaagattcaaaagtctcagacaagccgttttagtttttgaattgtttcaaacaagtc 42107282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 20913996 - 20913937
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||| |||||||||    
T  20913996 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgttttaaacaagtc 20913937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 20922114 - 20922055
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||||||||||| ||| |||| |||||||||    
T  20922114 ctttaagtttcaaaagtcccaaacaagtcattttagtttttgaatcgttttaaacaagtc 20922055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 51475214 - 51475261
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  51475214 ccaaagtggtcctttaagtttcaaaagtctcaaacaagtccttttagt 51475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 51475267 - 51475306
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  51475267 attgtagatagcatagttggtaattgcttccttgaactca 51475306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 21656418 - 21656476
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||| ||  |||||||||||||||||||||| ||| || |||||||||||    
T  21656418 tttaagtttcaaaagttccaaacaagtccttttagtttttgaatcgtctcaaacaagtc 21656476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 22851895 - 22851956
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||| ||| |||  ||||||||| ||||||||||| ||| ||||||||||||||||    
T  22851895 ctttaagttttaaaagtcctaaacaagtcattttagtttttgaatcgtttcaaacaagtcat 22851956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 35608372 - 35608312
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    ||||||||||||||  || |||||||||| ||||||||||| ||| ||||||||||||||||    
T  35608372 ctttaagtttcaaaattcccaaacaagtc-ttttagtttttgaatcgtttcaaacaagtcat 35608312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 40922407 - 40922346
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||||||| |||  ||||||||| ||||||||||| | | ||||||||||||||||    
T  40922407 ctttaagtttcaaaagtccaaaacaagtcattttagtttttgactcgtttcaaacaagtcat 40922346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 1449031 - 1448999
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||||    
T  1449031 tttttggtcaaatgcatctaaaggtcctttaag 1448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 20813774 - 20813738
Alignment:
Q  178 ttttatttttggtcaaatgcatctaaaggtcctttaa 214  Q
    ||||||||| |||||||||||||||||||||||||||    
T  20813774 ttttattttaggtcaaatgcatctaaaggtcctttaa 20813738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 32651101 - 32651053
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  32651101 caaagtggtcctttaagtttcaaaagtctcaaacaagtcctttaagttt 32651053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 42641395 - 42641335
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||||||| ||| |||| || || ||||||||||| ||| ||||||||||||||    
T  42641395 tctttaagtttcaaaagtcccaaataaatctttttagtttttgaatcgtttcaaacaagtc 42641335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 50364855 - 50364899
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtcctttt 272  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  50364855 ccaaagtggtcatttaagtttcaaaagtctcaaacaagtcctttt 50364899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 33151959 - 33151869
Alignment:
Q  188 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| |||||||||||||||||| |||||    
T  33151959 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaacaagtcctttaagttt 33151869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 48651151 - 48651206
Alignment:
Q  243 aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||| ||| |||||||||| |||||| |||| ||| ||||||||||||||    
T  48651151 aagtttcaaaagtcccaaacaagtctttttaggttttgaatcgtttcaaacaagtc 48651206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 50364908 - 50364947
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  50364908 attgtagataacatagttggtaattgcttccttgaactca 50364947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 50977984 - 50977945
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  50977984 attgtagatagcatagttggtagttgcttccttgaactca 50977945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 51081116 - 51081077
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  51081116 attgtagatagcatagttggtagttgcttccttgaactca 51081077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 215
Target Start/End: Complemental strand, 19229287 - 19229257
Alignment:
Q  185 tttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||||    
T  19229287 tttggtcaaatgcatctaaaggtcctttaag 19229257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 32651062 - 32651004
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||  ||||||| | |||||||||||| ||| |||||||||||||    
T  32651062 ctttaagtttcaaaagttccaaacaaattcttttagtttttgaatcgtttcaaacaagt 32651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 20760400 - 20760367
Alignment:
Q  182 atttttggtcaaatgcatctaaaggtcctttaag 215  Q
    ||||| ||||||||||||||||||||||||||||    
T  20760400 attttaggtcaaatgcatctaaaggtcctttaag 20760367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 53926233 - 53926165
Alignment:
Q  229 ccaaagtggtc--tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||  ||||||||||||| |||| |||||| || ||||||||||| ||  |||||||||||    
T  53926233 ccaaagtggtccttttaagtttcaaaagtctaaaacaaatctttttagtttttgaaccgtttcaaacaa 53926165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 1687894 - 1687858
Alignment:
Q  179 tttatttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  1687894 tttagtttaggtcaaatgcatctaaaggtcctttaag 1687858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 10618387 - 10618415
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||||||    
T  10618387 tggtcaaatgcatctaaaggtcctttaag 10618415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 19268381 - 19268429
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  19268381 caaagtggtcctttaagtttcaaaagtctcaaacaagtcttttaagttt 19268429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 19664401 - 19664449
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  19664401 caaagtggtcctttaagtttcaaaagtcccaaacaagtcctttaagttt 19664449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 50978026 - 50977990
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    |||||||||||||| |||||||||||||| |||||||    
T  50978026 ctttaagtttcaaaagtctcaaacaagtcattttagt 50977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 51081158 - 51081122
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagt 275  Q
    |||||||||||||| |||||||||||||| |||||||    
T  51081158 ctttaagtttcaaaagtctcaaacaagtcattttagt 51081122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 51562022 - 51562070
Alignment:
Q  230 caaagtggt-ctttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||| |||||||||||||| |||||||||||||| ||| |||||    
T  51562022 caaagtggttctttaagtttcaaaagtctcaaacaagtcttttaagttt 51562070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 4975 - 5087
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgc 327  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||     
T  4975 ccaaagtggtcctttaagtttcaaaagtccaaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcatagttggtaattgt 5074  T
Q  328 ttccttgaactca 340  Q
    || ||||||||||    
T  5075 tttcttgaactca 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 5268 - 5210
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||  ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  5268 tttaagtttcaaaaatctcaaacaagtcattttagtttttgaatcgtttcaaacaagtc 5210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 5309 - 5260
Alignment:
Q  229 ccaaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||||||| |||||||||| |||||||||||||| ||| |||||    
T  5309 ccaaagtggtcttttaagtttcaaaagtctcaaacaagtcatttaagttt 5260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 5420 - 5266
Alignment:
Q  187 tggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattg 285  Q
    |||||||||||||||||||||||||||||             | ||||||||| ||||||||| ||| ||| ||||||| |||||||||||||| ||| |    
T  5420 tggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctttaagttttaaaagtcacaaacaaatccttttagtttttgaatcg 5321  T
Q  286 tttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  5320 tttcaaacaagtcatgttgtagatagcataattgttaattgcttccttgaactca 5266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 5081 - 5138
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    ||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||    
T  5081 tctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaa 5138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 13286 - 13176
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| ||||||  || ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||    
T  13286 aaagtggtcttttaagttttgaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcataattgataattcctt 13187  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  13186 ccttgaactca 13176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 12995 - 13053
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  12995 tttaagtttcacaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 13053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 12955 - 13003
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  12955 caaagtggtcctttaagtttcaaaagtctcaaacaagtcttttaagttt 13003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 59558 - 59668
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| ||||||  || ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||    
T  59558 aaagtggtcttttaagttttgaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtcatattgtagatagcataattgataattcctt 59657  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  59658 ccttgaactca 59668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 59849 - 59791
Alignment:
Q  240 tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  59849 tttaagtttcacaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagtc 59791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 59889 - 59841
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    |||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  59889 caaagtggtcctttaagtttcaaaagtctcaaacaagtcttttaagttt 59841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 219077 - 218967
Alignment:
Q  231 aaagtggtcttt-aagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    |||||||||||| |||||||||| ||| |||||||||||||||| ||||  ||| |||||||||||||| |||||||||||||||| |||||||||||||    
T  219077 aaagtggtcttttaagtttcaaaagtcccaaacaagtccttttaattttcgaatcgtttcaaacaagtcctattgtagatagcatagttggtaattgctt 218978  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  218977 ccttgaactca 218967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 218774 - 218845
Alignment:
Q  230 caaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcat 300  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  218774 caaagtggtcctttaagtttcaaaagtctcaaacaagtcattttagtttttgaatcgtttcaaacaagtcat 218845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 340
Target Start/End: Original strand, 252396 - 252498
Alignment:
Q  238 tctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaac 337  Q
    ||||||| |||||||  |||||||||| ||| |||||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||||||| ||||||    
T  252396 tctttaaatttcaaaactctcaaacaaatccatttagtttttgaatcgtttcaaacaagtcctattgtatatagcatagttggtaattgcttcattgaac 252495  T
Q  338 tca 340  Q
    |||    
T  252496 tca 252498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 252691 - 252621
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  252691 ccaaagtggtcctttaagttttaaaagtctcaaacaagtccttttagtttttaaatcgtttcaaacaagtc 252621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 721 - 620
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||| ||| || |||||||||||||| ||| |||||||||||||| || |||  |||||||| ||||||||||||||||||||||    
T  721 ctttaagtttcaaaagtctgaaataaatccttttagtttttgaatcgtttcaaacaagtcctaatgttaatagcatagttggtaattgcttccttgaact 622  T
Q  339 ca 340  Q
    ||    
T  621 ca 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 761 - 712
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  761 ccaaagtggtccttttagtttcaaaagtctcaaacaagtcctttaagttt 712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 1872 - 1973
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    |||||||||||||| |||| ||| || |||||||||||||| ||| |||||||||||||| || |||  |||||||| ||||||||||||||||||||||    
T  1872 ctttaagtttcaaaagtctgaaataaatccttttagtttttgaatcgtttcaaacaagtcctaatgttaatagcatagttggtaattgcttccttgaact 1971  T
Q  339 ca 340  Q
    ||    
T  1972 ca 1973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 1832 - 1881
Alignment:
Q  229 ccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagttt 277  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||| |||||    
T  1832 ccaaagtggtccttttagtttcaaaagtctcaaacaagtcctttaagttt 1881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 1999 - 1898
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||| |||||||| |||||||||||||| ||||||||||| ||| |||||||||||||| || ||| ||||||||| ||| ||||||||||||||| ||    
T  1999 ctttatgtttcaaaagtctcaaacaagtcgttttagtttttgaatcgtttcaaacaagtcctaatgttgatagcatagttgataattgcttccttgacct 1900  T
Q  339 ca 340  Q
    ||    
T  1899 ca 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 48153 - 48043
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgctt 329  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||||||||| ||| |||| |||||||||  |||||| ||  |||| |||||||||||||    
T  48153 aaagtggtcatttaagtttcaaaagtccaaaacaagtccttttagtttttgaatcgttttaaacaagtccgattgtatatcacatagttggtaattgctt 48054  T
Q  330 ccttgaactca 340  Q
    |||||||||||    
T  48053 ccttgaactca 48043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 47861 - 47919
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||| ||||||| |||||||||||||| | |  ||||||||||||    
T  47861 ctttaagtttcaaaagtcccaaacaaatccttttagtttttgagtcatttcaaacaagt 47919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 3331 - 3431
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||  || |||||||||| ||||||||||| ||| |||||||| ||||| || ||| ||||||||| ||||||||||||||||||||||    
T  3331 ctttaagtttcaaaaatc-caaacaagtcattttagtttttgaatcgtttcaaataagtcctaatgttgatagcatagttggtaattgcttccttgaact 3429  T
Q  339 ca 340  Q
    ||    
T  3430 ca 3431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 270 - 195
Alignment:
Q  265 gtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||| |||||||||||||| || ||||||||||||| | ||||||||||||||||||||||    
T  270 gtccttttagtttttgaatcgtttcaaacaagtcctaatgtagatagcatagtcggtaattgcttccttgaactca 195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 13 - 72
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| ||| |||||||||| ||| ||||||| ||| ||||||||||||||    
T  13 ctttaagtttcaaaagtcccaaacaagtcatttaagtttttgaatcgtttcaaacaagtc 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 11264 - 11323
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagtc 298  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  11264 ctttaagtttcaaaagtctcaaacaagtccttttagtttttgaatcgtttcaaacaagtc 11323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 11514 - 11441
Alignment:
Q  265 gtccttttagtttttaaattgtttcaaacaagtcatattgtagatagcataattggtaattgcttccttgaact 338  Q
    ||||||||||||||||||| |||| ||| ||| | |||||||| ||||||| ||||||||||||||||| ||||    
T  11514 gtccttttagtttttaaatcgttttaaataagacctattgtaggtagcatagttggtaattgcttccttaaact 11441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 451 - 387
Alignment:
Q  231 aaagtggtctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaa 295  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||| ||| |||||||||||    
T  451 aaagtggtctttaagtttcaaaagtcacaaacaagtctttttagtttttgaatcgtttcaaacaa 387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 2224 - 2157
Alignment:
Q  231 aaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  2224 aaagtggtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagt 2157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 1994 - 2033
Alignment:
Q  301 attgtagatagcataattggtaattgcttccttgaactca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  1994 attgtagatagcatagttggtaattgcttccttgaactca 2033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 5838 - 5728
Alignment:
Q  184 ttttggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtggtc-tttaagtttcaaaggtctcaaacaagtccttttagtttttaaa 282  Q
    ||||||||||||||||||||||||||||||||             ||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| |     
T  5838 ttttggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagtcccaaacaagtccttttagtttttgat 5739  T
Q  283 ttgtttcaaac 293  Q
    |||||||||||    
T  5738 ttgtttcaaac 5728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14548 - 14606
Alignment:
Q  239 ctttaagtttcaaaggtctcaaacaagtccttttagtttttaaattgtttcaaacaagt 297  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||    
T  14548 ctttaagtttcaaaagtcccaaacaagtccttttagtttttgaatcgtttcaaacaagt 14606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 101329 - 101297
Alignment:
Q  183 tttttggtcaaatgcatctaaaggtcctttaag 215  Q
    |||||||||||||||||||||||||| ||||||    
T  101329 tttttggtcaaatgcatctaaaggtcatttaag 101297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University