View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14944_low_28 (Length: 285)

Name: NF14944_low_28
Description: NF14944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14944_low_28
NF14944_low_28
[»] chr4 (68 HSPs)
chr4 (147-282)||(16070399-16070536)
chr4 (152-282)||(25477198-25477330)
chr4 (147-282)||(5448630-5448767)
chr4 (152-282)||(20262394-20262526)
chr4 (170-282)||(30153222-30153336)
chr4 (154-282)||(52225994-52226124)
chr4 (147-282)||(51787739-51787876)
chr4 (170-282)||(22750842-22750956)
chr4 (156-282)||(5536474-5536602)
chr4 (201-282)||(19654452-19654533)
chr4 (201-282)||(28116505-28116586)
chr4 (152-282)||(32236804-32236936)
chr4 (152-282)||(46729279-46729410)
chr4 (183-279)||(14602658-14602756)
chr4 (203-282)||(20291366-20291445)
chr4 (199-282)||(41945773-41945855)
chr4 (201-279)||(29584918-29584996)
chr4 (183-282)||(34543706-34543807)
chr4 (183-282)||(37625125-37625226)
chr4 (147-282)||(52552511-52552648)
chr4 (170-282)||(37175022-37175135)
chr4 (169-279)||(39237592-39237704)
chr4 (201-282)||(43800832-43800913)
chr4 (170-279)||(12624687-12624798)
chr4 (157-282)||(24072745-24072872)
chr4 (170-282)||(5167971-5168084)
chr4 (199-272)||(5932908-5932981)
chr4 (201-278)||(33246501-33246578)
chr4 (174-268)||(50782773-50782869)
chr4 (205-282)||(54438538-54438615)
chr4 (199-279)||(48472498-48472578)
chr4 (170-279)||(52198731-52198842)
chr4 (203-282)||(31937392-31937471)
chr4 (202-281)||(43509107-43509185)
chr4 (201-282)||(13096542-13096623)
chr4 (201-282)||(20185656-20185737)
chr4 (201-282)||(38136379-38136460)
chr4 (206-282)||(7002212-7002288)
chr4 (202-282)||(44812607-44812687)
chr4 (163-282)||(20116436-20116555)
chr4 (203-278)||(22651490-22651565)
chr4 (207-281)||(39197035-39197110)
chr4 (201-272)||(56373354-56373425)
chr4 (204-258)||(3094209-3094263)
chr4 (183-282)||(20791931-20792032)
chr4 (183-272)||(31486492-31486583)
chr4 (220-272)||(31840139-31840191)
chr4 (206-282)||(32107874-32107950)
chr4 (220-279)||(26186758-26186817)
chr4 (175-282)||(39414232-39414339)
chr4 (202-272)||(3684198-3684268)
chr4 (209-279)||(5416872-5416942)
chr4 (220-282)||(40411343-40411405)
chr4 (183-282)||(41920038-41920139)
chr4 (203-280)||(26203156-26203233)
chr4 (221-282)||(36513310-36513371)
chr4 (201-282)||(45628075-45628155)
chr4 (209-278)||(52768903-52768972)
chr4 (201-282)||(10602210-10602287)
chr4 (206-261)||(51918673-51918728)
chr4 (206-279)||(10541260-10541333)
chr4 (199-282)||(54701290-54701370)
chr4 (185-234)||(54359690-54359741)
chr4 (228-278)||(21171775-21171825)
chr4 (240-282)||(26170267-26170309)
chr4 (205-282)||(20293775-20293852)
chr4 (206-281)||(18683536-18683609)
chr4 (205-281)||(52676048-52676124)
[»] chr5 (57 HSPs)
chr5 (154-282)||(34877641-34877771)
chr5 (147-282)||(25017673-25017810)
chr5 (147-282)||(10933974-10934111)
chr5 (147-282)||(3247273-3247410)
chr5 (152-282)||(36177265-36177397)
chr5 (169-282)||(5845166-5845281)
chr5 (183-282)||(35569004-35569105)
chr5 (199-282)||(27798178-27798261)
chr5 (205-282)||(4857493-4857570)
chr5 (169-282)||(20946077-20946192)
chr5 (170-279)||(27642493-27642604)
chr5 (184-272)||(15898472-15898562)
chr5 (147-282)||(21574880-21575016)
chr5 (205-282)||(3559026-3559103)
chr5 (170-272)||(10523283-10523387)
chr5 (201-278)||(43060513-43060590)
chr5 (170-279)||(39690488-39690599)
chr5 (202-272)||(12895218-12895288)
chr5 (183-281)||(27587842-27587942)
chr5 (169-282)||(4738620-4738735)
chr5 (201-272)||(600789-600860)
chr5 (147-282)||(3631119-3631254)
chr5 (201-279)||(4745151-4745229)
chr5 (183-282)||(29866193-29866294)
chr5 (208-282)||(30348076-30348150)
chr5 (203-272)||(19281500-19281569)
chr5 (153-282)||(40979211-40979342)
chr5 (183-279)||(38972129-38972226)
chr5 (205-271)||(9946368-9946434)
chr5 (201-279)||(21912144-21912222)
chr5 (201-282)||(11980740-11980821)
chr5 (201-282)||(41521212-41521293)
chr5 (201-281)||(16115-16195)
chr5 (205-281)||(43454010-43454086)
chr5 (154-245)||(15967148-15967242)
chr5 (202-282)||(18729613-18729697)
chr5 (208-282)||(14044497-14044571)
chr5 (199-281)||(36347601-36347683)
chr5 (229-282)||(16496488-16496541)
chr5 (229-282)||(19089020-19089073)
chr5 (225-282)||(30317797-30317854)
chr5 (239-282)||(8717958-8718001)
chr5 (199-266)||(31642484-31642550)
chr5 (227-282)||(34676171-34676226)
chr5 (220-282)||(10656633-10656695)
chr5 (183-271)||(25690697-25690789)
chr5 (201-255)||(32067852-32067906)
chr5 (199-244)||(129632-129677)
chr5 (201-282)||(42644477-42644558)
chr5 (230-282)||(556054-556106)
chr5 (214-282)||(5151199-5151267)
chr5 (214-282)||(5764222-5764290)
chr5 (201-241)||(7510630-7510670)
chr5 (238-282)||(7736041-7736085)
chr5 (201-252)||(29874202-29874253)
chr5 (203-272)||(731961-732031)
chr5 (220-282)||(9375638-9375700)
[»] chr7 (52 HSPs)
chr7 (152-282)||(4089500-4089632)
chr7 (152-282)||(1324681-1324813)
chr7 (141-279)||(36116283-36116423)
chr7 (152-282)||(37673710-37673842)
chr7 (175-282)||(10685081-10685190)
chr7 (152-282)||(49100644-49100776)
chr7 (183-282)||(37491619-37491720)
chr7 (152-282)||(48767537-48767670)
chr7 (199-282)||(25750390-25750473)
chr7 (170-282)||(33181286-33181400)
chr7 (170-281)||(20123441-20123554)
chr7 (147-281)||(2276578-2276714)
chr7 (152-282)||(48610136-48610268)
chr7 (201-281)||(5334396-5334476)
chr7 (201-281)||(6376134-6376214)
chr7 (153-282)||(18122042-18122173)
chr7 (202-281)||(21388267-21388346)
chr7 (203-282)||(21809647-21809726)
chr7 (147-282)||(36726174-36726310)
chr7 (183-282)||(37048039-37048140)
chr7 (201-282)||(48193639-48193720)
chr7 (203-279)||(21801059-21801135)
chr7 (202-282)||(40263736-40263816)
chr7 (147-282)||(35128354-35128489)
chr7 (199-282)||(43465143-43465226)
chr7 (201-279)||(26632870-26632948)
chr7 (183-282)||(46783841-46783942)
chr7 (201-281)||(21752552-21752632)
chr7 (206-282)||(31373698-31373774)
chr7 (201-279)||(21392896-21392974)
chr7 (175-282)||(26200968-26201077)
chr7 (203-282)||(40740976-40741057)
chr7 (147-282)||(29723429-29723566)
chr7 (206-282)||(28663784-28663860)
chr7 (206-282)||(35960407-35960483)
chr7 (202-282)||(42983614-42983694)
chr7 (201-280)||(23876061-23876140)
chr7 (170-282)||(29636041-29636154)
chr7 (183-282)||(29992979-29993080)
chr7 (202-264)||(40211295-40211357)
chr7 (201-282)||(19236067-19236148)
chr7 (206-282)||(42993188-42993264)
chr7 (220-279)||(27162907-27162966)
chr7 (232-282)||(37136236-37136286)
chr7 (226-259)||(12645602-12645635)
chr7 (201-258)||(41672591-41672648)
chr7 (170-268)||(10595113-10595211)
chr7 (183-282)||(27213491-27213592)
chr7 (202-251)||(20124213-20124262)
chr7 (227-272)||(26830132-26830177)
chr7 (201-282)||(27170036-27170116)
chr7 (220-272)||(47458196-47458248)
[»] chr3 (70 HSPs)
chr3 (147-282)||(12077745-12077882)
chr3 (147-282)||(30476008-30476145)
chr3 (175-281)||(13084361-13084469)
chr3 (147-272)||(29676751-29676878)
chr3 (152-269)||(40645646-40645765)
chr3 (152-282)||(41727240-41727372)
chr3 (157-282)||(20945302-20945429)
chr3 (170-282)||(26517217-26517331)
chr3 (199-282)||(50363048-50363131)
chr3 (183-282)||(29645361-29645462)
chr3 (183-282)||(31819409-31819510)
chr3 (185-282)||(41825139-41825238)
chr3 (203-282)||(44083652-44083731)
chr3 (151-282)||(46048492-46048626)
chr3 (170-281)||(46435735-46435846)
chr3 (147-282)||(41308778-41308915)
chr3 (201-282)||(51263105-51263186)
chr3 (199-282)||(26043040-26043123)
chr3 (199-282)||(39617252-39617335)
chr3 (183-282)||(26121335-26121436)
chr3 (201-281)||(14645892-14645972)
chr3 (207-282)||(21932955-21933030)
chr3 (183-282)||(22659583-22659684)
chr3 (201-282)||(11388144-11388225)
chr3 (201-282)||(29611857-29611938)
chr3 (206-282)||(28477413-28477489)
chr3 (206-282)||(41739975-41740051)
chr3 (154-259)||(43187118-43187225)
chr3 (199-282)||(26243493-26243576)
chr3 (208-279)||(35055816-35055887)
chr3 (211-282)||(54425958-54426029)
chr3 (201-279)||(27047183-27047261)
chr3 (201-279)||(48901522-48901600)
chr3 (201-279)||(48903088-48903166)
chr3 (175-282)||(54555926-54556035)
chr3 (205-282)||(37729031-37729108)
chr3 (183-281)||(42891422-42891522)
chr3 (201-282)||(52325505-52325586)
chr3 (173-282)||(27638079-27638190)
chr3 (170-259)||(31531450-31531541)
chr3 (170-282)||(831362-831476)
chr3 (209-272)||(31474455-31474518)
chr3 (203-282)||(42010893-42010972)
chr3 (204-279)||(50524981-50525056)
chr3 (147-282)||(50092635-50092772)
chr3 (199-264)||(11140726-11140791)
chr3 (203-279)||(25750552-25750628)
chr3 (183-279)||(33287869-33287967)
chr3 (227-282)||(35145280-35145335)
chr3 (211-282)||(48309477-48309548)
chr3 (202-272)||(11344582-11344651)
chr3 (222-279)||(2421128-2421185)
chr3 (206-259)||(31650690-31650743)
chr3 (183-244)||(35765686-35765749)
chr3 (174-282)||(26998889-26998999)
chr3 (207-282)||(39931910-39931985)
chr3 (201-282)||(33411977-33412056)
chr3 (225-279)||(44338128-44338182)
chr3 (206-268)||(48213653-48213715)
chr3 (166-251)||(34055895-34055982)
chr3 (202-282)||(41543609-41543689)
chr3 (211-282)||(21864331-21864401)
chr3 (17-80)||(24714814-24714877)
chr3 (220-279)||(28229207-28229266)
chr3 (204-279)||(28243785-28243860)
chr3 (201-251)||(11393945-11393995)
chr3 (152-222)||(5504604-5504676)
chr3 (225-281)||(383653-383709)
chr3 (199-235)||(23157116-23157152)
chr3 (183-232)||(53717578-53717629)
[»] chr1 (74 HSPs)
chr1 (147-282)||(5085088-5085225)
chr1 (147-282)||(5322022-5322159)
chr1 (149-282)||(16582502-16582637)
chr1 (154-282)||(29140653-29140783)
chr1 (147-282)||(48721867-48722005)
chr1 (147-282)||(33231807-33231944)
chr1 (141-279)||(8877733-8877873)
chr1 (157-270)||(30898574-30898689)
chr1 (170-282)||(23982591-23982705)
chr1 (152-282)||(3143375-3143507)
chr1 (201-282)||(8984660-8984741)
chr1 (201-282)||(28723652-28723733)
chr1 (169-282)||(44652860-44652972)
chr1 (202-282)||(24415024-24415104)
chr1 (169-282)||(25269366-25269481)
chr1 (147-279)||(32047409-32047541)
chr1 (201-282)||(47070960-47071041)
chr1 (201-282)||(47754641-47754722)
chr1 (170-282)||(13723477-13723591)
chr1 (183-282)||(44395538-44395639)
chr1 (193-282)||(34102351-34102440)
chr1 (183-281)||(51996958-51997058)
chr1 (170-279)||(15512783-15512894)
chr1 (170-279)||(28948966-28949077)
chr1 (206-282)||(32152186-32152262)
chr1 (183-272)||(38680478-38680569)
chr1 (147-282)||(3831016-3831151)
chr1 (199-282)||(36084991-36085074)
chr1 (147-282)||(9675666-9675803)
chr1 (183-282)||(16395547-16395648)
chr1 (155-282)||(30336034-30336163)
chr1 (199-281)||(46495330-46495412)
chr1 (199-280)||(15179431-15179512)
chr1 (209-282)||(25063241-25063314)
chr1 (199-280)||(34696884-34696965)
chr1 (125-281)||(47643490-47643643)
chr1 (206-282)||(4813461-4813537)
chr1 (202-282)||(31305342-31305422)
chr1 (147-282)||(5852850-5852985)
chr1 (175-279)||(25258325-25258431)
chr1 (201-272)||(31807981-31808052)
chr1 (199-258)||(44335310-44335369)
chr1 (208-282)||(2342934-2343008)
chr1 (183-270)||(15911563-15911652)
chr1 (208-282)||(32144341-32144415)
chr1 (201-282)||(20564798-20564879)
chr1 (201-282)||(35365983-35366064)
chr1 (201-279)||(52141177-52141257)
chr1 (198-282)||(13145438-13145522)
chr1 (199-267)||(44163253-44163321)
chr1 (183-259)||(13352837-13352915)
chr1 (147-278)||(35001273-35001406)
chr1 (206-282)||(51390536-51390609)
chr1 (225-282)||(10842374-10842431)
chr1 (201-281)||(46591125-46591205)
chr1 (212-279)||(291637-291704)
chr1 (201-272)||(41737148-41737219)
chr1 (183-281)||(4817906-4818004)
chr1 (183-281)||(4829706-4829804)
chr1 (206-267)||(6282502-6282563)
chr1 (170-282)||(10160709-10160816)
chr1 (206-282)||(4081954-4082030)
chr1 (158-231)||(28334265-28334340)
chr1 (199-255)||(34012078-34012134)
chr1 (170-259)||(50692399-50692490)
chr1 (175-282)||(3143735-3143842)
chr1 (220-282)||(15457814-15457876)
chr1 (170-259)||(27531089-27531180)
chr1 (201-279)||(40261618-40261694)
chr1 (201-282)||(3072162-3072241)
chr1 (203-261)||(9684738-9684796)
chr1 (206-272)||(28679831-28679896)
chr1 (203-257)||(47133463-47133517)
chr1 (209-282)||(34331906-34331979)
[»] chr8 (66 HSPs)
chr8 (154-282)||(39543661-39543794)
chr8 (152-282)||(25185003-25185135)
chr8 (154-282)||(25198264-25198394)
chr8 (147-282)||(38770188-38770325)
chr8 (152-282)||(38761359-38761491)
chr8 (147-279)||(16002727-16002861)
chr8 (153-280)||(37141700-37141829)
chr8 (152-282)||(41086949-41087079)
chr8 (199-282)||(24512168-24512251)
chr8 (183-279)||(43980587-43980685)
chr8 (173-282)||(37600889-37601000)
chr8 (199-282)||(2562731-2562814)
chr8 (199-282)||(31252656-31252739)
chr8 (147-282)||(57189-57326)
chr8 (204-282)||(36309597-36309675)
chr8 (147-282)||(37956090-37956226)
chr8 (152-282)||(7772485-7772617)
chr8 (201-282)||(31746406-31746487)
chr8 (170-279)||(24962369-24962480)
chr8 (170-278)||(26878733-26878843)
chr8 (183-282)||(40790793-40790893)
chr8 (208-282)||(43191478-43191552)
chr8 (201-282)||(36437525-36437606)
chr8 (210-279)||(40517773-40517842)
chr8 (201-282)||(40602042-40602123)
chr8 (206-282)||(12762871-12762947)
chr8 (203-282)||(17933730-17933810)
chr8 (170-278)||(24276562-24276670)
chr8 (206-282)||(34882699-34882775)
chr8 (202-282)||(38202993-38203073)
chr8 (199-282)||(3113534-3113617)
chr8 (202-281)||(31673621-31673700)
chr8 (180-279)||(3006785-3006886)
chr8 (183-282)||(14577653-14577754)
chr8 (147-282)||(40337192-40337329)
chr8 (154-236)||(4273955-4274039)
chr8 (156-282)||(7172196-7172324)
chr8 (202-279)||(14846925-14847002)
chr8 (211-272)||(34157951-34158012)
chr8 (204-281)||(45183863-45183940)
chr8 (206-282)||(5191550-5191626)
chr8 (202-270)||(14739454-14739522)
chr8 (201-281)||(30262540-30262620)
chr8 (147-282)||(38773349-38773487)
chr8 (183-282)||(45203763-45203863)
chr8 (204-279)||(44255480-44255555)
chr8 (199-281)||(885484-885565)
chr8 (218-280)||(10396233-10396295)
chr8 (183-282)||(25888599-25888700)
chr8 (212-282)||(35794777-35794847)
chr8 (203-281)||(45185269-45185347)
chr8 (201-282)||(1177157-1177238)
chr8 (203-260)||(14906627-14906684)
chr8 (201-282)||(22590399-22590480)
chr8 (225-282)||(23399778-23399835)
chr8 (174-282)||(12998694-12998804)
chr8 (201-244)||(14522643-14522686)
chr8 (199-282)||(35709100-35709183)
chr8 (203-238)||(45283827-45283862)
chr8 (153-279)||(1769452-1769579)
chr8 (201-272)||(27589-27660)
chr8 (223-282)||(2031262-2031321)
chr8 (207-282)||(12894205-12894280)
chr8 (169-272)||(16644047-16644152)
chr8 (209-282)||(41541581-41541652)
chr8 (225-282)||(23280699-23280756)
[»] chr2 (67 HSPs)
chr2 (147-272)||(9718182-9718309)
chr2 (147-282)||(8065072-8065209)
chr2 (141-282)||(41665673-41665815)
chr2 (152-282)||(27297550-27297682)
chr2 (147-282)||(44424563-44424700)
chr2 (152-282)||(15851504-15851636)
chr2 (203-282)||(3237749-3237828)
chr2 (202-282)||(37355061-37355141)
chr2 (170-282)||(28264951-28265065)
chr2 (199-282)||(31644442-31644525)
chr2 (170-282)||(45214716-45214830)
chr2 (201-282)||(24774889-24774970)
chr2 (152-282)||(35178793-35178925)
chr2 (169-279)||(35241711-35241823)
chr2 (203-272)||(38449724-38449793)
chr2 (202-282)||(7255626-7255706)
chr2 (153-282)||(17250961-17251092)
chr2 (170-279)||(17663615-17663726)
chr2 (202-281)||(11459178-11459257)
chr2 (152-279)||(28733798-28733925)
chr2 (207-282)||(38982071-38982146)
chr2 (183-282)||(2131761-2131862)
chr2 (147-234)||(13534383-13534471)
chr2 (204-282)||(14527650-14527728)
chr2 (203-264)||(44274685-44274746)
chr2 (199-272)||(44421471-44421544)
chr2 (202-282)||(375345-375425)
chr2 (201-281)||(14420701-14420780)
chr2 (181-272)||(4033583-4033676)
chr2 (205-279)||(26512099-26512173)
chr2 (201-282)||(11071692-11071773)
chr2 (205-282)||(28190626-28190703)
chr2 (205-282)||(34330030-34330107)
chr2 (199-272)||(43650056-43650129)
chr2 (153-282)||(3326698-3326829)
chr2 (198-282)||(23464704-23464788)
chr2 (201-279)||(2521303-2521381)
chr2 (201-259)||(4398547-4398605)
chr2 (201-279)||(20362007-20362084)
chr2 (205-279)||(41865744-41865817)
chr2 (201-282)||(247684-247765)
chr2 (165-279)||(21012839-21012955)
chr2 (206-282)||(32677504-32677580)
chr2 (201-282)||(35453735-35453814)
chr2 (169-279)||(1246416-1246528)
chr2 (202-279)||(2048833-2048908)
chr2 (201-282)||(16808823-16808904)
chr2 (201-282)||(16848104-16848185)
chr2 (205-282)||(25731186-25731263)
chr2 (206-282)||(40346081-40346157)
chr2 (206-282)||(45150736-45150812)
chr2 (201-272)||(6275578-6275648)
chr2 (227-282)||(43119369-43119424)
chr2 (174-253)||(8384001-8384082)
chr2 (201-279)||(43709943-43710021)
chr2 (205-278)||(4758054-4758127)
chr2 (203-272)||(6597882-6597950)
chr2 (203-272)||(8393234-8393303)
chr2 (203-272)||(36846781-36846850)
chr2 (203-272)||(44462591-44462660)
chr2 (183-244)||(27749516-27749579)
chr2 (226-282)||(43638821-43638877)
chr2 (170-282)||(3645314-3645428)
chr2 (199-272)||(7278623-7278696)
chr2 (203-272)||(15578091-15578160)
chr2 (203-279)||(7257941-7258017)
chr2 (201-279)||(42250882-42250957)
[»] chr6 (31 HSPs)
chr6 (170-281)||(1763804-1763917)
chr6 (199-282)||(16350543-16350626)
chr6 (183-282)||(16327127-16327228)
chr6 (169-282)||(9461283-9461398)
chr6 (202-282)||(15981819-15981899)
chr6 (202-282)||(30465969-30466049)
chr6 (201-282)||(12514586-12514667)
chr6 (209-282)||(34513219-34513292)
chr6 (170-279)||(19838922-19839033)
chr6 (169-281)||(11302845-11302959)
chr6 (147-282)||(5895699-5895836)
chr6 (205-282)||(9428195-9428272)
chr6 (183-281)||(22410845-22410945)
chr6 (201-278)||(31945917-31945994)
chr6 (202-272)||(3729414-3729484)
chr6 (183-282)||(31536016-31536117)
chr6 (201-282)||(10669275-10669356)
chr6 (205-282)||(31152989-31153066)
chr6 (183-272)||(197462-197553)
chr6 (206-282)||(33607384-33607460)
chr6 (203-279)||(6791404-6791478)
chr6 (206-270)||(12514768-12514832)
chr6 (175-278)||(1514233-1514337)
chr6 (205-279)||(28238318-28238392)
chr6 (207-261)||(30248593-30248647)
chr6 (181-282)||(20522974-20523077)
chr6 (199-238)||(4250703-4250742)
chr6 (206-272)||(5457216-5457282)
chr6 (201-282)||(16186597-16186675)
chr6 (206-279)||(31780153-31780226)
chr6 (205-265)||(5084555-5084615)
[»] scaffold1091 (1 HSPs)
scaffold1091 (201-282)||(1913-1994)
[»] scaffold0005 (1 HSPs)
scaffold0005 (183-279)||(214622-214720)
[»] scaffold0182 (2 HSPs)
scaffold0182 (199-282)||(22082-22165)
scaffold0182 (206-280)||(18718-18792)
[»] scaffold0012 (1 HSPs)
scaffold0012 (211-282)||(99817-99888)
[»] scaffold0038 (1 HSPs)
scaffold0038 (205-279)||(38480-38554)
[»] scaffold0013 (2 HSPs)
scaffold0013 (203-282)||(61282-61361)
scaffold0013 (203-279)||(49162-49238)
[»] scaffold0176 (1 HSPs)
scaffold0176 (199-261)||(19554-19614)


Alignment Details
Target: chr4 (Bit Score: 87; Significance: 9e-42; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 16070399 - 16070536
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| ||||||||| ||||| || ||||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  16070399 ccgtcccttaatgtaggcacctattgtctttttcacatttcttaagaaatgctgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 16070498  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||| ||||||| |||||||||||||||| |||||||||    
T  16070499 atcttttgtttatatatgtattaaatttgacttttcat 16070536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 25477198 - 25477330
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| || | ||||| |||| || ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  25477198 ccttaatgtaggcatccattgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacaaaattgtcat 25477297  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  25477298 ttgtttgtatgtgtattaaatttgacttttcat 25477330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 5448630 - 5448767
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || | |||||||||| || |||||||||||||||||  || | ||||||||||||||||||| |||||||||||||| |||||    
T  5448630 ccgtcccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttatcaatataattaatgtgtctgttttgtgtgttaatattacgaaatt 5448729  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||| ||||||||||| |||||||||||| |||||||||    
T  5448730 atcctttgtttgtatgtgtattaaatttgacttttcat 5448767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 20262526 - 20262394
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||| |||||||  |||||||||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||| ||||| | ||    
T  20262526 ccttaatatagacactcattgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttat 20262427  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  20262426 ttgtttgtatgtgtattaaatttgacttttcat 20262394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 30153336 - 30153222
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  |||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||| |||||||    
T  30153336 ttgcgtttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgataatattaccaaattatcctttatttgtatgtgtatta 30153237  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  30153236 aatttgacttttcat 30153222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 52225994 - 52226124
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    |||||||||  |||||||| ||||| || |||| ||||||||||||  |||| ||||||||||||||||||||| ||||||||||| |||||| || |||    
T  52225994 ttaatgtaggtacctattgtctttttcacattttttaagaaatgttgtcagtataattaatgtgtctgttttatatgttaatattatcaaattgtccttt 52226093  T
Q  252 gtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||| |||||||||||| |||||||||    
T  52226094 gtttatatgtgtattaaatttgacttttcat 52226124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 51787739 - 51787876
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||||||||||||||| |||  ||| | |||| || ||||||||||||| |||  | |||||||||||||||||||||| |||||||||||||| ||||     
T  51787739 ccgttccttaatgtaggcactcattccatttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaata 51787838  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
      ||||||||||||| |||||||||||| |||||||||    
T  51787839 gacatttgtttgtatgtgtattaaatttgacttttcat 51787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 22750956 - 22750842
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  | ||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||| |||||||    
T  22750956 ttgcatttttcacatttcttaagaaaagttgtctgtgtaattaatgtatctgttttgtgtattaatattaccaaattgtcatttgtttgtatgtgtatta 22750857  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  22750856 aatttgacttttcat 22750842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 5536474 - 5536602
Alignment:
Q  156 aatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgt 253  Q
    ||||||| |||| || ||||||| || |||||||||||||  ||  ||||||||||||||||||||||||  ||||||||| ||| ||||| ||||||||    
T  5536474 aatgtaggcacccatagcctttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgcgtgttaatactacgaaattttcatttgt 5536573  T
Q  254 ttgtatatgtattaaattttacttttcat 282  Q
    |||||| |||||||||||| | |||||||    
T  5536574 ttgtatgtgtattaaatttgatttttcat 5536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 19654452 - 19654533
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||  ||||||||    
T  19654452 agtgtaattaatgtgtctattttatgtgttgatattaccaaattatcatttatttgtatgtgtattaaatttatcttttcat 19654533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 28116586 - 28116505
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  28116586 agtgtaattaatatgtctattttgtgtgttaatattgccaaattatcatttgtttgtatgtgtattaaatttgacttttcat 28116505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 32236804 - 32236936
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||| ||| |||| ||||| || | ||||||| || |||||||||  ||||||||||||| |||||||||| ||||||||||||| ||||||||  |    
T  32236804 ccttaatatagccacccattgctttattcatatttttttagaaatgttgtcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattattct 32236903  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| ||| |||||||||||| |||||||||    
T  32236904 ttgtttatatgtgtattaaatttgacttttcat 32236936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 46729279 - 46729410
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||||||   |||| ||||| || |||| |||||||| |||  |||||||||||||||||||||||| |||||||||||||| ||||| || |    
T  46729279 ccttaatgtagacattcattgtctttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcct 46729377  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
     ||||||||| |||||||||||| |||||||||    
T  46729378 atgtttgtatgtgtattaaatttgacttttcat 46729410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 14602756 - 14602658
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| |||   ||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  14602756 atttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 14602658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 20291366 - 20291445
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||| |||| || ||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  20291366 tgtaattaatgtgtctattttgtgggttaatattactaaattatcatttgtttgtatgtgtattaaatttgacttttcat 20291445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 41945855 - 41945773
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||| || |||||||||||||||||||||||| |||||||||    
T  41945855 tcagtgtaattaatgtgt-tgttttatgtgataatattacgaaattgtcctttgtttgtatatgtattaaatttgacttttcat 41945773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 29584918 - 29584996
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||||||| || | |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  29584918 agtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 29584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 34543706 - 34543807
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  | ||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||| |||||||| ||| |||||||    
T  34543706 atttcttaagaaaagttgtccgtgtaattaatgtgtctattttgtgtgttaatattaccaaataatcctttgtttgtatgtgtattaattttgacttttc 34543805  T
Q  281 at 282  Q
    ||    
T  34543806 at 34543807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 37625226 - 37625125
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  |||| |||||||||||| | |||| |||||||||||||| |||||||||||||||| ||| |||||||||||| |||||||    
T  37625226 atttcttaagaaaagttgtcagtataattaatgtgtttattttgtgtgttaatattactaaattatcatttgtttatatgtgtattaaatttgacttttc 37625127  T
Q  281 at 282  Q
    ||    
T  37625126 at 37625125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 52552648 - 52552511
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| | |||| ||| ||  ||| |||||||| |||  ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  52552648 ccgtcccttaatgtaggcacccaatgcccttttcacgttttttaagaaaagttgtcagtgtaataaatttgtctgctttatgtgttaatattaccaaatt 52552549  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||| ||||||||||  ||||| |||||| |||||||||    
T  52552548 atcctttgtttgtacgtgtataaaatttgacttttcat 52552511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 37175135 - 37175022
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttca-gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaa 268  Q
    |||| |||| || ||||||||||||| |||   ||||||||||||||||| |||| |||||||||||||||||||| || ||||||||||| ||||||||    
T  37175135 ttgcttttttcacatttcttaagaaaagttgttgtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaa 37175036  T
Q  269 attttacttttcat 282  Q
    |||  |||||||||    
T  37175035 attagacttttcat 37175022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 39237704 - 39237592
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||| ||||| || |||| |||||||| |||  ||||||||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||||    
T  39237704 attgtctttttcacattttttaagaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtatt 39237605  T
Q  267 aaattttactttt 279  Q
    |||||| ||||||    
T  39237604 aaatttgactttt 39237592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 43800832 - 43800913
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| || ||||||||||| |||||| ||||| |||||||||    
T  43800832 agtgtaattaaggtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtatttaatttgacttttcat 43800913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 12624687 - 12624798
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   ||||||||||||||| || ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  12624687 ttgcttttttcacatttcttaagaaaagttgttagtgtaattaatgtgactattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 12624786  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  12624787 aatttgactttt 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 24072745 - 24072872
Alignment:
Q  157 atgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtt 254  Q
    |||||| |||| |||| |||||  | ||||||||||||| |||  || ||||||||||||||||||||| |||||||||||||  ||||| ||||||| |    
T  24072745 atgtaggcacccattgtcttttttacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcatttgct 24072844  T
Q  255 tgtatatgtattaaattttacttttcat 282  Q
    || || |||||||||||| |||||||||    
T  24072845 tgaatgtgtattaaatttgacttttcat 24072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 5167971 - 5168084
Alignment:
Q  170 ttgccttttacatatttcttaagaaa-tgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaa 268  Q
    |||| |||| ||||||| |||| ||| | ||| ||||||||||| |||||||||| || ||||||||||| ||||| |||||||||||||| ||||||||    
T  5167971 ttgcatttttcatattttttaataaagttttcggtgtaattaatatgtctgttttgtgcgttaatattactaaattgtcatttgtttgtatgtgtattaa 5168070  T
Q  269 attttacttttcat 282  Q
    |||| | |||||||    
T  5168071 atttaatttttcat 5168084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 5932908 - 5932981
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||| |||||||||| ||| ||||||||||||    
T  5932908 tcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcatttgtttttatgtgtattaaattt 5932981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 33246578 - 33246501
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  33246578 agtgtaattaaaatgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgacttt 33246501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 50782773 - 50782869
Alignment:
Q  174 cttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaa 268  Q
    ||||| || ||||||||||||| |||  |||||||||||||||||||||||| ||| |||||||||| ||||| || ||||||||||| ||||||||    
T  50782773 ctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtcttaatattacgaaattgtcctttgtttgtatgtgtattaa 50782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 54438538 - 54438615
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||| |||||||||||| |||||||||    
T  54438538 taattaaagtgtctgttttgtgtgttaatattacgaaattatcctttatttgtatgtgtattaaatttgacttttcat 54438615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 48472578 - 48472498
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||| ||| ||||||| ||||| |||||| ||||||    
T  48472578 tcagtgtaattaatgtgtctattttgtgtgttaatattacgaaattatcctttctttgtatgtgtatgaaatttgactttt 48472498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 52198842 - 52198731
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  ||||||||||||| |||||||| | ||| ||||||||||||||||||| ||| ||||||| ||||||     
T  52198842 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttctgtgtattaatattaccaaattatcttttatttgtatgtgtattg 52198743  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  52198742 aatttgactttt 52198731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 31937471 - 31937392
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||| | ||| |||||| |||||||||    
T  31937471 tgtaattaatgtgtctgttttgtgtgttaatattattaaattgtcatttgtttgtatgtatataaaatttgacttttcat 31937392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 43509107 - 43509185
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| || ||||||||||| |||||||||||| ||||||||    
T  43509107 gtgtaattaatgtgt-tgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttaacttttca 43509185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 13096623 - 13096542
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||||| ||| || || ||| || |||||||||    
T  13096623 agtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcatttgtttctatgtgcataaaaattaacttttcat 13096542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 20185737 - 20185656
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||   ||||| ||||||||||||||||||||  | ||||||||||| |||||||||||| |||||||||    
T  20185737 agtgtaattaatgtgcaagttttgtgtgttaatattaccaaattgccttttgtttgtatttgtattaaatttgacttttcat 20185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 38136379 - 38136460
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||| |||| | ||||| | |||||||    
T  38136379 agtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtaattaatttgatttttcat 38136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 7002212 - 7002288
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| | | |||||||||||||||||||||||||||| ||||||||||| ||| |||||||| | |||||||    
T  7002212 aattaatgtttatattttatgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgatttttcat 7002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 44812687 - 44812607
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| | |||||||| |||||||||||| ||||| |||||| ||||| | |||||||||||| |||||||||    
T  44812687 gtgtaattaatgtatttgttttatatgttaatattacaaaattgtcatttatttgtgtgtgtattaaatttgacttttcat 44812607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 20116436 - 20116555
Alignment:
Q  163 acacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtata 260  Q
    ||||| ||||| |||| ||||||| |||||||| |||  || |||||||||||   ||||||| |||||||||||||  ||||| ||||||||||||||     
T  20116436 acacccattgcatttttcatatttattaagaaaagttgtcaatgtaattaatgc--ctgttttgtgtgttaatattaggaaattgtcatttgtttgtatg 20116533  T
Q  261 tgtattaaattttacttttcat 282  Q
    |||||||||||| | |||||||    
T  20116534 tgtattaaatttgatttttcat 20116555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 22651490 - 22651565
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||||||| | |||| | |||||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  22651490 tgtaattaatgtgtttattttgtatgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttt 22651565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 39197110 - 39197035
Alignment:
Q  207 attaatgtgtct-gttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||| ||||| ||||||||||||| |||||| || ||||||||||| |||||||||||| ||||||||    
T  39197110 attaatgtgtcttgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttca 39197035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 56373425 - 56373354
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||||| | |||| |||||||||||||||||||| |||||||||||| | ||||||||||||    
T  56373425 agtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgtttgtctgtgtattaaattt 56373354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 3094209 - 3094263
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgta 258  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  3094209 gtaattaatgtgtctattttgtgtgttaatattaccaaattgtcatttgtttgta 3094263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 20791931 - 20792032
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||| ||||| |||| ||||||||||||||  ||||||| ||| |||||||||||||||||||| | |||||    
T  20791931 atttcttaagaaaagttggtagtgcaattaatatgtctattttgtgtgttaatattacataattatcttttatttgtatatgtattaaatttgagttttc 20792030  T
Q  281 at 282  Q
    ||    
T  20792031 at 20792032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 31486492 - 31486583
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||| |||   |||| ||||||||||||| |||| |||||||||||||| |||||||| ||||||| |||  |||||||||||    
T  31486492 atttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtgttaatattactaaattatcctttgtttatatgcgtattaaattt 31486583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 31840139 - 31840191
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  31840139 ttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaattt 31840191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 32107874 - 32107950
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| | |||||| ||| ||||||||| |||||| || ||| |||||||||||||||||||| |||||||||    
T  32107874 aattaatgtatatgttttgtgtattaatattatcaaattgtcttttatttgtatatgtattaaatttgacttttcat 32107950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 26186817 - 26186758
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||||||||| |||||| |||||||||||||| |||||||||||| ||||||    
T  26186817 ttttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgactttt 26186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 39414232 - 39414339
Alignment:
Q  175 ttttacatatttcttaagaaatgttcag--tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||||||| ||| |   || ||||||| ||||| |||| ||||||||||||| ||||||||| ||||||||  ||||| ||||||||    
T  39414232 tttttcatatttcttaagaaaagttgataatgcaattaatatgtctattttgtgtgttaatattatcaaattatcttttgtttg--tatgtgttaaattt 39414329  T
Q  273 tacttttcat 282  Q
     |||||||||    
T  39414330 gacttttcat 39414339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 3684268 - 3684198
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||||| |||| ||| |||||||||  |||||||||||||||| ||| | ||||||||||    
T  3684268 gtgtaattaatgtgtctattttgtgtattaatattattaaattatcatttgtttatatgtatattaaattt 3684198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 5416942 - 5416872
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||| |||| | |||||||||||||||||| |  ||||||||||| |||||||||||| ||||||    
T  5416942 taatgtgtctattttgtttgttaatattaccaaattgtgttttgtttgtatgtgtattaaatttgactttt 5416872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 40411405 - 40411343
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| |||||||||||||  ||||| |||||||||||||| |||||||||||| |||||||||    
T  40411405 ttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttaacttttcat 40411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 41920139 - 41920038
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||| | ||| |||| |||||||||||||||||||| || ||||||||||| || | ||||||| |||||||    
T  41920139 atttcttaagaaaagttgttagtgcaattaatatttctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgaaataaatttgacttttc 41920040  T
Q  281 at 282  Q
    ||    
T  41920039 at 41920038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 26203156 - 26203233
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||||||||||| | | ||||||||||||||||||| ||||| || ||| ||||||| | |||||||||| |||||||    
T  26203156 tgtaattaatgtatatattttatgtgttaatattacaaaattgtcttttctttgtatgtatattaaatttgacttttc 26203233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 36513371 - 36513310
Alignment:
Q  221 tttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| |||||| |  |||||||||||||||||||||||| | |||||||    
T  36513371 tttatgtgttaatattatcaaattgttttttgtttgtatatgtattaaatttgatttttcat 36513310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 45628155 - 45628075
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||  | ||| ||| ||| |||||||||||| |||||||||    
T  45628155 agtgtaattgatgtgtctgttttgtgtattaatattaccaaattgccctttattt-tatgtgtattaaatttgacttttcat 45628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 52768972 - 52768903
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||| |||| ||||| |||||||| ||||| |||||| ||||||| |||||||||||| |||||    
T  52768972 taatgtgtctattttgtgtgtgaatattacaaaattgtcatttatttgtatgtgtattaaatttgacttt 52768903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 10602287 - 10602210
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| ||||| |||| |||||||||||||| ||||| || ||||||||    |||||||||||| |||||||||    
T  10602287 agtgtaattaatttgtctattttgtgtgttaatattactaaattgtcttttgtttg----tgtattaaatttgacttttcat 10602210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 51918728 - 51918673
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatat 261  Q
    ||||||||||||| |||| ||||||| ||||||||||||||  |||||||||||||    
T  51918728 aattaatgtgtctattttgtgtgttagtattaccaaattattctttgtttgtatat 51918673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 10541333 - 10541260
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||| | | |||| ||| ||||||||||||||||||| |||||||  || |||||||||||| ||||||    
T  10541333 aattaatgtatatattttgtgtattaatattaccaaattatcctttgtttaaatgtgtattaaatttgactttt 10541260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 54701370 - 54701290
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| ||| |||||  ||||||| |||   |||||| |||||| ||||||| |||||||||||| |||||||||    
T  54701370 tcagtgtaattaatatgtttgtttagtgtgttattat---caaattgtcatttatttgtatgtgtattaaatttaacttttcat 54701290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 54359690 - 54359741
Alignment:
Q  185 ttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaata 234  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||||||||    
T  54359690 ttcttaagaaaagttgtcagtataattaatgtgtctgttttatgtgttaata 54359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 21171775 - 21171825
Alignment:
Q  228 gttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||| ||||||||| ||| ||||||| |||||||||||| |||||    
T  21171775 gttaatattatcaaattatcttttatttgtatgtgtattaaatttgacttt 21171825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 26170309 - 26170267
Alignment:
Q  240 aaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| |||||| |||||||||||||||||||| |||||||||    
T  26170309 aaattgtcatttatttgtatatgtattaaatttgacttttcat 26170267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 20293775 - 20293852
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| | |||| | || |||||||||  |||| || ||||||||||| |||||||||||| ||| |||||    
T  20293775 taattaatgtgtatattttttatgctaatattactgaattgtcttttgtttgtatttgtattaaatttgactattcat 20293852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 18683609 - 18683536
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||||||||| | |||| || |||||||||||||| || || ||||||||  | |||||||||||| ||||||||    
T  18683609 aattaatgtgtttattttgtgcgttaatattaccaacttgtcctttgtttg--tttgtattaaatttgacttttca 18683536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 52676048 - 52676124
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||| ||||| |||| ||| |||||||||  ||||| || ||| ||| ||| |||||||||||| ||||||||    
T  52676048 taattaatatgtctattttttgtattaatattattaaattgtcctttatttatatgtgtattaaatttgacttttca 52676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 34877641 - 34877771
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    ||||||||||||   |||||||||| || |||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  34877641 ttaatgtagacattcattgcctttttcacatttcttaagaaatgttgtcagtgtaattaatttgtctgttttgtgtgttaatattaccaaattatcattt 34877740  T
Q  252 gtttgtatatgtattaaattttacttttcat 282  Q
    |||||| | |||||||||||| |||||||||    
T  34877741 gtttgtgtgtgtattaaatttgacttttcat 34877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 25017810 - 25017673
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| |||||||||||||||  |||| ||||| ||  ||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||    
T  25017810 ccgtcccttaatgtagacactcattgtctttttcacgtttcttaagaaatgttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaatt 25017711  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     |||||||||||||| |||||||||||| |||||||||    
T  25017710 gtcatttgtttgtatgtgtattaaatttgacttttcat 25017673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 10933974 - 10934111
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||||||||||||||| ||  ||||||||||| || |||| || |||||||||  |||||||||||||||||||||||| | ||||||||||||||||||    
T  10933974 ccgttccttaatgtaggcatttattgcctttttcacattttttcagaaatgttgtcagtgtaattaatgtgtctgttttgtatgttaatattaccaaatt 10934073  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||  ||||||||||| |||||||||||| |||||||||    
T  10934074 attctttgtttgtatgtgtattaaatttgacttttcat 10934111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 3247410 - 3247273
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    ||||||||||| ||||| ||| |||||||||| || ||||||||||||| |||  ||||||||||||| |||||||||| | |||||||||||| |||||    
T  3247410 ccgttccttaacgtagatacccattgcctttttcacatttcttaagaaaagttgacagtgtaattaatatgtctgttttgtatgttaatattacgaaatt 3247311  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| |||||||||||| |||||||||    
T  3247310 gtcctttgtttgtatgtgtattaaatttgacttttcat 3247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 36177265 - 36177397
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| || |||||| |||||  | ||||||||||||| |||  ||||||||||||||||||| |||| |||||||||||||| ||||| ||||    
T  36177265 ccttaatgtaggcatctattgtcttttttacatttcttaagaaaagttatcagtgtaattaatgtgtctattttgtgtgttaatattacaaaattgtcat 36177364  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  36177365 ttgtttgtatgtgtattaaatttgacttttcat 36177397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 5845166 - 5845281
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||||||||| ||||||||||||||| ||||  ||||||||||||||| | |||||| ||| ||||||||| |||||| |||||||||||||| ||||||    
T  5845166 attgcctttttcatatttcttaagaattgttgtcagtgtaattaatgtatttgttttgtgtattaatattatcaaattgtcatttgtttgtatgtgtatt 5845265  T
Q  267 aaattttacttttcat 282  Q
    |||||| |||||||||    
T  5845266 aaatttgacttttcat 5845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 35569105 - 35569004
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||| |||||||  ||||||||||| |||||||||||| |||||||    
T  35569105 atttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtattaatattactaaattattctttgtttgtatgtgtattaaatttgacttttc 35569006  T
Q  281 at 282  Q
    ||    
T  35569005 at 35569004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 27798178 - 27798261
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||    
T  27798178 tcagtgtaattaatttgtctgttttgtgtgttaatattatcaaattatcatttgtttgtatgtgtattaagtttgacttttcat 27798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 4857570 - 4857493
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||    
T  4857570 taattaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 4857493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 20946077 - 20946192
Alignment:
Q  169 attgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    ||||| |||| |||||||||||||||| |||   |||| |||||| |||||| |||| ||||||||||||| |||||| |||||||||||||| ||||||    
T  20946077 attgcatttttcatatttcttaagaaacgttgttagtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtatt 20946176  T
Q  267 aaattttacttttcat 282  Q
    |||||| |||||||||    
T  20946177 aaatttgacttttcat 20946192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 27642493 - 27642604
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  27642493 ttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcctttgtttgtatgtgtatta 27642592  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  27642593 aatttgactttt 27642604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 15898562 - 15898472
Alignment:
Q  184 tttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||    
T  15898562 tttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaattt 15898472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 21575016 - 21574880
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| |||| ||||| || |||||||||||||||||   |||||| ||||||||||| |||| | ||||||||||||||||||    
T  21575016 ccgtcccttaatgtaggcacccattgtctttttcacatttcttaagaaatgtttttagtgtacttaatgtgtctattttgtatgttaatattaccaaatt 21574917  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||  ||||||||||||  ||||||||    
T  21574916 gtcctttgtttgta-gtgtattaaatttgtcttttcat 21574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 3559103 - 3559026
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||    
T  3559103 taattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 3559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 10523387 - 10523283
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| ||||||| |||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||| |  ||||||| ||| |||||||    
T  10523387 ttgcttttttcatattttttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgttttttgtttttatgtgtatta 10523288  T
Q  268 aattt 272  Q
    |||||    
T  10523287 aattt 10523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 43060590 - 43060513
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||| ||||||||||| |||||||||||| |||||    
T  43060590 agtgtaattaatgtgtctattttgtgtgttaatattaccatattatcttttgtttgtatgtgtattaaatttgacttt 43060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 39690599 - 39690488
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  39690599 ttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 39690500  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  39690499 aatttgactttt 39690488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 12895288 - 12895218
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||| ||||||||||||    
T  12895288 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattgtcttttgtttgtatgtgtattaaattt 12895218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 27587842 - 27587942
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  |||| ||||||||||||||||||| |||||||||||||| ||||| || ||||| ||||| |||||||||||| | |||||    
T  27587842 atttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtatgtatgtgtattaaatttgatttttc 27587941  T
Q  281 a 281  Q
    |    
T  27587942 a 27587942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 4738620 - 4738735
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||| ||||| || |||||||||||||| ||  ||||||||||||||| | |||||| |||||||||||||| |||||  | ||||||| ||| ||||||    
T  4738620 attgtctttttcacatttcttaagaaatattgtcagtgtaattaatgtatttgttttgtgtgttaatattactaaattgacctttgtttttatgtgtatt 4738719  T
Q  267 aaattttacttttcat 282  Q
    |||||| |||||||||    
T  4738720 aaatttgacttttcat 4738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 600789 - 600860
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||||||| || | ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  600789 agtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcatttgtttgtatatgtattaaattt 600860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 3631254 - 3631119
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattat 246  Q
    |||| ||||||||||| || | |||| ||||| || ||||||||| |||  |   |||||||||||||||| ||||| ||||||||||||||  ||||      
T  3631254 ccgtcccttaatgtaggcatccattgtctttttcacatttcttaaaaaaattgtcgtgtaattaatgtgtcggttttgtgtgttaatattacgcaattga 3631155  T
Q  247 catttgtttgtatatgtattaaattttacttttcat 282  Q
    | ||||||||||| |||||||||||| |||||||||    
T  3631154 cctttgtttgtatgtgtattaaatttgacttttcat 3631119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 4745151 - 4745229
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||||||| | |||| || ||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  4745151 agtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 4745229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 29866193 - 29866294
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||| ||||| |||| ||||||||||||||||| || || ||||||||||| |||||||||||| |||||||    
T  29866193 atttcttaagaaaagttgttagtgcaattaatatgtcttttttgtgtgttaatattaccaagttgtcctttgtttgtatgtgtattaaatttgacttttc 29866292  T
Q  281 at 282  Q
    ||    
T  29866293 at 29866294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 30348150 - 30348076
Alignment:
Q  208 ttaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |||| |||||||||||||||||||| || ||||||||| | |||||||||||| |||||||||    
T  30348150 ttaatgtgtctattttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcat 30348076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 19281569 - 19281500
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||| |||||||| ||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  19281569 tgtaattaatgtatctgttttgtgtattaatattactaaattatcttttgtttgtatgtgtattaaattt 19281500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 40979342 - 40979211
Alignment:
Q  153 cttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatt 250  Q
    |||||||||| || | |||| ||||| |||||||||||| ||| |||  ||  ||||||||  ||| |||||| ||| |||||||||| ||||| || ||    
T  40979342 cttaatgtaggcatccattgtctttttcatatttcttaataaaagttgtcaaggtaattaacatgtatgttttgtgtattaatattacgaaattgtcctt 40979243  T
Q  251 tgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| |||||||||||| |||||||||    
T  40979242 tgtttgtatgtgtattaaatttgacttttcat 40979211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 38972226 - 38972129
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| |||   |||||||||||||||||| ||| |  |||||||||||||||||| || ||||||||||| |||||||||||| ||||||    
T  38972226 atttcttaagaaaagttgttagtgtaattaatgtgtctatttaaa-tgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 38972129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 9946434 - 9946368
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaatt 271  Q
    |||||||||||||||||||| || |||||||||| |||||||| ||||||||||  |||||||||||    
T  9946434 taattaatgtgtctgttttacgtattaatattacgaaattatcctttgtttgtacgtgtattaaatt 9946368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 21912144 - 21912222
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||| ||||||||||| ||||||||||||||||||  ||||| || ||||||||||| |||||||| ||| ||||||    
T  21912144 agtgtagttaatgtgtctattttatgtgttaatattattaaattgtcttttgtttgtatgtgtattaagtttgactttt 21912222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 11980740 - 11980821
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| |||||||||||||| | ||||||   ||||| ||| |||||||||||| |||||||||    
T  11980740 agtgtaattaatgtgtctattttgtgtgttaatattactatattatccactgtttatatgtgtattaaatttgacttttcat 11980821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 41521212 - 41521293
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||| ||||| |||| |||||||||||||  ||||| |||||||||| ||| |||||||||||| |||||||||    
T  41521212 agtgaaattaatatgtctattttgtgtgttaatattattaaattgtcatttgtttatatgtgtattaaatttgacttttcat 41521293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 16195 - 16115
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||| ||||||||| ||| |||| ||||| |||||||| ||||| || ||||||||||| |||||||||||| ||||||||    
T  16195 agtgcaattaatgtatctattttttgtgtgaatattactaaattgtcctttgtttgtatttgtattaaatttgacttttca 16115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 43454010 - 43454086
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||||||||||| ||||| | ||||||||||| |||| |||| ||||||||||| |||||||||||| | ||||||    
T  43454010 taattaatgtgtcagttttgtatgttaatattatcaaactatcttttgtttgtatgtgtattaaatttgatttttca 43454086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 15967242 - 15967148
Alignment:
Q  154 ttaatgtagacacctattgcctttta-catatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatta 245  Q
    ||||||||||||   ||||||||||  || ||||||||||||| |||  | |||||||||||||||||||||| ||| |||||||||||||||||    
T  15967242 ttaatgtagacattcattgccttttttcacatttcttaagaaaggttgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaatta 15967148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 18729613 - 18729697
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatca----tttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| |||| |||||||||||||  ||| |||||    ||||||||||| |||||||||||| |||||||||    
T  18729613 gtgtaattaatgtgtctattttgtgtgttaatattattaaagtatcatttgtttgtttgtatgtgtattaaatttgacttttcat 18729697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 14044571 - 14044497
Alignment:
Q  208 ttaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||| ||| ||| ||| |||||||| |||||||||    
T  14044571 ttaatatgtctattttatgtattaatattatcaaattatcatttatttttatgtgtgttaaatttgacttttcat 14044497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 36347683 - 36347601
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||||| |||||||| ||| ||||||||| ||||||    ||||||||||| |||||||||||| ||| ||||    
T  36347683 tcagtgtaattaatgtatctgttttgtgtattaatattatcaaattgatttttgtttgtatgtgtattaaatttgactattca 36347601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 16496488 - 16496541
Alignment:
Q  229 ttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||| ||||||||||| | |||||||||| |||||||||    
T  16496488 ttaatattaccaaattatcctttgtttgtatgtatattaaatttgacttttcat 16496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 19089073 - 19089020
Alignment:
Q  229 ttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| ||||| |||||||||||||| |||||||||||| |||||||||    
T  19089073 ttaatattactaaattgtcatttgtttgtatttgtattaaatttgacttttcat 19089020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 30317797 - 30317854
Alignment:
Q  225 tgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||||| || ||||||||| | |||||||||||| |||||||||    
T  30317797 tgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcat 30317854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 8718001 - 8717958
Alignment:
Q  239 caaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| ||||||||||||||||||||||||||| |||||||||    
T  8718001 caaattgtcatttgtttgtatatgtattaaatttgacttttcat 8717958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 31642550 - 31642484
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||||||||||||||||||| |||| |||||||||||||||||| | || ||||||| ||| ||||||    
T  31642550 tcagtgtaattaatgtgtct-ttttgtgtgttaatattaccaaactgtcttttgtttatatgtgtatt 31642484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 34676171 - 34676226
Alignment:
Q  227 tgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||| |||| ||||    
T  34676171 tgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttatcat 34676226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 10656633 - 10656695
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||||||||||||| ||| |||||||  || |||||||| |||||||||    
T  10656633 ttttatgtgttaaaattaccaaattatcttttttttgtattggtgttaaatttgacttttcat 10656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 25690789 - 25690697
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatat--taccaaattatcatttgtttgtatatgtattaaatt 271  Q
    ||||||||||||| |||  | ||||||||||||||| |||||| |||||||||||  |  |||||| || ||||||||||| |||||||||||    
T  25690789 atttcttaagaaaagttgtcggtgtaattaatgtgtatgttttgtgtgttaatatagttacaaattgtcctttgtttgtatgtgtattaaatt 25690697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 32067852 - 32067906
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgttt 255  Q
    |||| |||| |||||||| |||| |||||||||||||||||||| ||||||||||    
T  32067852 agtgcaattcatgtgtctattttgtgtgttaatattaccaaattgtcatttgttt 32067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 129632 - 129677
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||    
T  129632 tcagtgtaattaatgtgtctattttgtgtattaatattaccaaatt 129677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 42644558 - 42644477
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||  | |||| | || |||||||| |||||| |||||||||||||| | ||||||||||  ||||||||    
T  42644558 agtgtaattaatgtgattattttgtatgctaatattatcaaattgtcatttgtttgtatgtatattaaatttgtcttttcat 42644477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 556054 - 556106
Alignment:
Q  230 taatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| ||||| |||||| | |||||||||||||||||| |||||||||    
T  556054 taatattactaaattgtcatttttctgtatatgtattaaatttgacttttcat 556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 5151267 - 5151199
Alignment:
Q  214 tgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| |||| ||| |||||||||||||||| || ||| ||||| | |||||||||||| |||||||||    
T  5151267 tgtcttttttgtgtattaatattaccaaattgtcctttatttgtgtgtgtattaaatttgacttttcat 5151199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 5764290 - 5764222
Alignment:
Q  214 tgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| |||| |||||||| ||||| |||||||| |||||||  ||| ||||||||||| |||||||||    
T  5764290 tgtctattttgtgtgttaacattactaaattatcctttgtttacataagtattaaatttaacttttcat 5764222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 7510630 - 7510670
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaa 241  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  7510630 agtgtaattaatgtgtatgttttgtgtgttaatattaccaa 7510670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 7736041 - 7736085
Alignment:
Q  238 ccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||    
T  7736041 ccaaattatcatttgtttgtatgtgtgttaaatttgacttttcat 7736085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 29874202 - 29874253
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttg 252  Q
    |||||| ||||||| ||| |||| |||||||||||||||||||| |||||||    
T  29874202 agtgtagttaatgtatctattttgtgtgttaatattaccaaattgtcatttg 29874253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 732031 - 731961
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaatt-atcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||| ||| |||||| ||||||||||||| ||||||  || ||||||||||| ||||||||||||    
T  732031 tgtagttaatatgtttgttttgtgtgttaatattatcaaattgttcttttgtttgtatgtgtattaaattt 731961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 9375700 - 9375638
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| |||| ||||||||||||||| || ||||||||||| | |||||||||| | |||||||    
T  9375700 ttttgtgtgctaatattaccaaattgtcttttgtttgtatgtttattaaatttgatttttcat 9375638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 4089632 - 4089500
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| || | |||| ||||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||| |||||||| |    
T  4089632 ccttaatgtaggcatccattgactttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattatctt 4089533  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||| |||||||||    
T  4089532 ttgtttgtatatgtattaaatttgacttttcat 4089500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 1324681 - 1324813
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||  |||  |||||||||| || |||||||||||||||||  |||||||||||||||||||||||| ||||||||| ||| |||||| ||||    
T  1324681 ccttaatgtatccactcattgcctttttcacatttcttaagaaatgttatcagtgtaattaatgtgtctgttttgtgtgttaatcttatcaaattgtcat 1324780  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  1324781 ttgtttgtatgtgtattaaatttgacttttcat 1324813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 36116283 - 36116423
Alignment:
Q  141 ctctccccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattac 238  Q
    ||||| |||| ||||||||||| ||   |||| ||||| || |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36116283 ctctctccgtcccttaatgtaggcattcattgtctttttcacatttcttaagaaatgttgtcggtgtaattaatgtgtctgttttatgtgttaatattac 36116382  T
Q  239 caaattatcatttgtttgtatatgtattaaattttactttt 279  Q
     ||||| |||||||||||||| |||||||||||| ||||||    
T  36116383 gaaattgtcatttgtttgtatgtgtattaaatttgactttt 36116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 37673710 - 37673842
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||||   ||||||||||||||||||||||| |||||||||||||  ||||| || |    
T  37673710 ccttaatgtagacacccattgtctttttcacatttcttaagaaatgttgtgagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtctt 37673809  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  37673810 ttgtttgtatgtgtattaaatttgacttttcat 37673842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 10685081 - 10685190
Alignment:
Q  175 ttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||    
T  10685081 tttttcatatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaattt 10685180  T
Q  273 tacttttcat 282  Q
     |||||||||    
T  10685181 gacttttcat 10685190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 49100644 - 49100776
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| |||| |||||||||| |  || |||||| | | |||  ||||||||||||||||||||||||||||||||||||||| ||||| || |    
T  49100644 ccttaatgtagccacccattgcctttttcgcatctcttaaaataagttgtcagtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcct 49100743  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  49100744 ttgtttgtatgtgtattaaatttgacttttcat 49100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 37491720 - 37491619
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  37491720 atttcttaagaaaagttgttagtgcaattaatgtgtctattttatatgttaatattaccaaattatcctttgtttgtatatgtattaaatttgacttttc 37491621  T
Q  281 at 282  Q
    ||    
T  37491620 at 37491619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 48767537 - 48767670
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| |||| ||||| |||| || ||||||||| ||| |||  |||||||||||||||||||||||| |||||||||||||| ||||| || |    
T  48767537 ccttaatgtaggcacccattgcttttttcacatttcttaaaaaacgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcct 48767636  T
Q  250 ttg-tttgtatatgtattaaattttacttttcat 282  Q
    ||| ||||||| |||||||||||| |||||||||    
T  48767637 ttgttttgtatgtgtattaaatttgacttttcat 48767670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 25750390 - 25750473
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| | |||||||    
T  25750390 tcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 25750473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 33181286 - 33181400
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| |||||||||||| |||||||  ||||||| ||||||||| |||||| | | |||||||||||||||| |||||||||||||| |||||||    
T  33181286 ttgcatttttcatatttcttaaaaaatgttgtcagtgtagttaatgtgtttgttttgtatattaatattaccaaattgtcatttgtttgtatgtgtatta 33181385  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  33181386 aatttaacttttcat 33181400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 20123441 - 20123554
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||| |||||||    
T  20123441 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtatta 20123540  T
Q  268 aattttacttttca 281  Q
    ||||| | ||||||    
T  20123541 aatttgaattttca 20123554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 281
Target Start/End: Complemental strand, 2276714 - 2276578
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| |||||||||| || ||| || | |||| || ||||||||| ||| |||  ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  2276714 ccgtcccttaatgtaaactccttttacatttttcacatttcttaacaaaagttgtcagtgtagttaatttgtctgttttgtgtgttaatattaccaaatt 2276615  T
Q  245 atcatttgtttgtatatgtattaaattttacttttca 281  Q
     || ||||||||||| |||||||||||| ||||||||    
T  2276614 gtcctttgtttgtatgtgtattaaatttgacttttca 2276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 48610268 - 48610136
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    |||||||||||  | ||||||| |||| || |||| |||||||| |||  || ||||||||||||||||||||| ||| |||||||||| ||||| || |    
T  48610268 ccttaatgtagctatctattgcatttttcacattttttaagaaaagttgtcactgtaattaatgtgtctgttttgtgtattaatattacgaaattgtctt 48610169  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  48610168 ttgtttgtatgtgtattaaatttgacttttcat 48610136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 5334476 - 5334396
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  5334476 agtgtaattaatgtgtttgttttgtatgttaatattaccaaactatcatttgtttgtatgtgtattaaatttgacttttca 5334396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 6376214 - 6376134
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||    
T  6376214 agtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaacttttca 6376134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 18122173 - 18122042
Alignment:
Q  153 cttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatt 250  Q
    ||||||||| ||| | |||| ||||| || ||||||||||||| |||   |||||||||| ||||||||||||||||||||||||||| ||||| || ||    
T  18122173 cttaatgtatacatccattgtctttttcacatttcttaagaaaagttgtgagtgtaattagtgtgtctgttttatgtgttaatattactaaattttcctt 18122074  T
Q  251 tgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| || ||||| |||||| |||||||||    
T  18122073 tgtttgaatgtgtataaaatttgacttttcat 18122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 21388267 - 21388346
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||    
T  21388267 gtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttca 21388346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 21809726 - 21809647
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  21809726 tgtaattaatgtgtctgttttttgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 21809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 36726310 - 36726174
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || | |||||||||| |  || |||||||| |||||   |||||||||||||||| |||||| ||||||||||||||||||||    
T  36726310 ccgtcccttaatgtaggcatccattgcctttttcgcatctcttaagagatgttgttagtgtaattaatgtgtttgttttgtgtgttaatattaccaaatt 36726211  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||| ||| |||||||||||| |||||||||    
T  36726210 gtcctttgttt-tatgtgtattaaatttgacttttcat 36726174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 37048039 - 37048140
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  |||||||||||||||||||||||| ||||||||| || ||||||| || ||||||||||| |||||||||||| ||| |||    
T  37048039 atttcttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatgttcccaaattgtcctttgtttgtatgtgtattaaatttaactattc 37048138  T
Q  281 at 282  Q
    ||    
T  37048139 at 37048140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 48193639 - 48193720
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||||    
T  48193639 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttatattagtattaaatttgacttttcat 48193720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 21801135 - 21801059
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||| |||||||||||| ||||||    
T  21801135 tgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttatttgtatgtgtattaaatttgactttt 21801059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 40263736 - 40263816
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||   |||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||    
T  40263736 gtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 40263816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 35128354 - 35128489
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||  ||||||||| ||||| || ||||  ||||||| |||  ||||||||||||| |||||||||| |||||||||||||  |||||    
T  35128354 ccgtcccttaatgtaagcacctattgtctttttcacattt--taagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattatgaaatt 35128451  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| |||||||||||| | |||||||    
T  35128452 gtcctttgtttgtatgtgtattaaatttgaattttcat 35128489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 43465226 - 43465143
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||||| || ||||||||||| |||||||||||| |||||||||    
T  43465226 tcagtgtaattaatgtgtctgttttgtgtgttagtattttcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 43465143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 26632870 - 26632948
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||| || ||||||||| ||||||    
T  26632870 agtgtagttaatgtgtctattttatgtgttaatattactaaattatcttttgtttgtatgtgcattaaatttgactttt 26632948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 46783942 - 46783841
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||||||||| | ||||||||||||||||||||||| || |||||| |||| |||||||||||| |||||||    
T  46783942 atttcttaagaaaagttattagtgaaattaatgtgtctatcttatgtgttaatattaccaaattgtcttttgttcgtatgtgtattaaatttgacttttc 46783843  T
Q  281 at 282  Q
    ||    
T  46783842 at 46783841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 21752552 - 21752632
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||| ||||||| ||| | |||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21752552 agtgcaattaatttgtttattttgtgggttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttca 21752632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 31373774 - 31373698
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| |||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  31373774 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 31373698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 21392974 - 21392896
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||||||||| ||||  |||||||||||||||||||||  ||||||||||| |||||||||||| ||||||    
T  21392974 agtgcaattaatgtgtctattttgagtgttaatattaccaaattatattttgtttgtatgtgtattaaatttgactttt 21392896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 26201077 - 26200968
Alignment:
Q  175 ttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||||||| |||   |||| ||||| ||||||| |||| ||| ||||||||| ||||||||  ||||||||||| ||||||||||||    
T  26201077 tttttcatatttcttaagaaaagttattagtgcaattattgtgtctattttgtgtattaatattatcaaattattctttgtttgtatgtgtattaaattt 26200978  T
Q  273 tacttttcat 282  Q
     |||||||||    
T  26200977 aacttttcat 26200968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 40740976 - 40741057
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtata--tgtattaaattttacttttcat 282  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||  ||| |||||||| |||||||||    
T  40740976 tgtaattaatatgtctattttgtgtgttaatattaccaaattatcatttctttgtatatgtgtgttaaatttgacttttcat 40741057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 29723429 - 29723566
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgt-tcagtgtaattaatgtgtctgtttta-tgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| |||| ||||| || |||| |||  |||| | ||| ||||||||||||| |||||||  |||| ||||||||| ||||     
T  29723429 ccgtcccttaatgtaggcacccattgtctttttcacattttttagaaaatttgtcattgtaattaatgtgcctgtttttgtgtggtaatattacgaaata 29723528  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| |||| |||||||||| |||||||||    
T  29723529 atcatttgtttgcatatatattaaatttgacttttcat 29723566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 28663784 - 28663860
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| ||||||||||||| |||||||| |||||||||||| | |||||||||| |||| ||||    
T  28663784 aattaatgtgtctattttgtgtgttaatattatcaaattattatttgtttgtatgtatattaaatttgacttctcat 28663860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 35960407 - 35960483
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||||||| || ||||||| |||||||| ||||||||||| ||| |||||||| |||||||||    
T  35960407 aattaatgtgtctattttatgtatttatattactaaattatcttttgtttgtatgtgtgttaaatttgacttttcat 35960483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 42983694 - 42983614
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| |||||| |||||||||||  ||||| || | ||||||||| |||||||||||| |||||||||    
T  42983694 gtgtaattaatgtgtctcttttatatgttaatattattaaattgtcttatgtttgtatgtgtattaaatttgacttttcat 42983614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 23876061 - 23876140
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||||| ||||| ||||  ||||||||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||    
T  23876061 agtgtagttaatatgtccattttatgtgttaatattactaaattgtcttttgtttgtatgtgtattaaatttaacttttc 23876140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 29636154 - 29636041
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| ||||||| |||| |||||||| |||  || ||||||||||||||||||||| ||||||||||||||||||||  | ||||||| ||| ||||||     
T  29636154 ttgcattttacacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattaccaaatt-gcctttgtttttatgtgtattt 29636056  T
Q  268 aattttacttttcat 282  Q
    ||||| | |||||||    
T  29636055 aatttaatttttcat 29636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 29992979 - 29993080
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||||||||| |||| | |||||||| |||||||||||||||||||||| | | | |||||||| |||||||    
T  29992979 atttcttaagaaaagttgttagtgcaattaatgtgtctattttgtatgttaatactaccaaattatcatttgtttgtgtgtttgttaaatttaacttttc 29993078  T
Q  281 at 282  Q
    ||    
T  29993079 at 29993080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 40211357 - 40211295
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgta 264  Q
    |||||||||||||||||||||| |||||||||||||| ||||| |||||| ||||||| ||||    
T  40211357 gtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcatttatttgtatgtgta 40211295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 19236148 - 19236067
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| ||||| | |||||||||||||| ||| |  ||||||||||| |||||||||||| | |||||||    
T  19236148 agtgtaattaatgtgtcggttttgtatgttaatattaccatattgttctttgtttgtatgtgtattaaatttgatttttcat 19236067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 42993264 - 42993188
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| |||||| |||||||||||||||||| ||||||| | |||||| |||| |||||||||||| | |||||||    
T  42993264 aattaacgtgtctattttatgtgttaatattatcaaattaacctttgttagtatgtgtattaaatttgatttttcat 42993188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 27162966 - 27162907
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||| |||||||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  27162966 ttttgtgttttaatattgccaaattgtcatttgtttgtatgtgtattaaatttaactttt 27162907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 37136236 - 37136286
Alignment:
Q  232 atattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||||||||||||| ||| |||||||| |||||||||    
T  37136236 atataaccaaattatcatttgtttgtatgtgtgttaaatttgacttttcat 37136286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 12645602 - 12645635
Alignment:
Q  226 gtgttaatattaccaaattatcatttgtttgtat 259  Q
    ||||||||||||||||||||||||||||||||||    
T  12645602 gtgttaatattaccaaattatcatttgtttgtat 12645635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 41672648 - 41672591
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgta 258  Q
    |||||||||||||||||| |||| ||||| ||||| || |||||||| ||||||||||    
T  41672648 agtgtaattaatgtgtctattttgtgtgtgaatataactaaattatcctttgtttgta 41672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 10595211 - 10595113
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  |||| |||||||| |||||||||| |||||||||  ||| ||| | || ||||||||||| |||||||    
T  10595211 ttgcgtttttcacatttcttaagaaaagttgtcagtataattaatatgtctgttttgtgtgttaat--tacgaaactgtcttttgtttgtatgtgtatta 10595114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 27213491 - 27213592
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| || |||| ||||| |||| |||||||||||||| ||||| || ||||||||||| | ||||||| || || ||||    
T  27213491 atttcttaagaaaagttgttagtgcaactaatatgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtctattaaaattgacatttc 27213590  T
Q  281 at 282  Q
    ||    
T  27213591 at 27213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 20124213 - 20124262
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    ||||||||||||||||| |||||||| || | ||||| ||||||||||||    
T  20124213 gtgtaattaatgtgtctattttatgtattgacattactaaattatcattt 20124262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 26830177 - 26830132
Alignment:
Q  227 tgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||| |||||||||||||||| ||| |||||| |||||    
T  26830177 tgttaatattactaaattatcatttgtttatatgtgtatttaattt 26830132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 27170036 - 27170116
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||| ||||| |||| ||||| |||||||||||||| | |||||||  ||| | |||||||||| |||||||||    
T  27170036 agtgcaattaatttgtctattttgtgtgt-aatattaccaaattgtgatttgttcatatgtctattaaatttgacttttcat 27170116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 47458248 - 47458196
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||||  ||||| || ||||||||||| ||||||||||||    
T  47458248 ttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaattt 47458196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 12077882 - 12077745
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| ||||| |||| || ||||||||||||| |||  ||||||||||||||||||| |||| |||||||||||||| |||||    
T  12077882 ccgtcccttaatgtaggcacccattgcatttttcaaatttcttaagaaaagttgtcagtgtaattaatgtgtctcttttgtgtgttaatattacaaaatt 12077783  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     |||||||||||||| |||||||||||| |||||||||    
T  12077782 gtcatttgtttgtatgtgtattaaatttgacttttcat 12077745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 30476008 - 30476145
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| |||||||||| || |||| |||||||| |||  |||||||||||||||||||||||| |||||||||||||| |||||    
T  30476008 ccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaatt 30476107  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| | |||||||||| |||||||||    
T  30476108 gtcctttgtttgtatgtctattaaatttgacttttcat 30476145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 13084469 - 13084361
Alignment:
Q  175 ttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||||||| |||  |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  13084469 tttttcatatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaattt 13084370  T
Q  273 tacttttca 281  Q
     ||||||||    
T  13084369 gacttttca 13084361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 29676878 - 29676751
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| |||||||||| ||||||||||||||||  ||  ||||||||||||||||||| ||||||||||||||||||| |||||    
T  29676878 ccgtcccttaatgtaggcacccattgcctttttcatatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgtgttaatattacgaaatt 29676779  T
Q  245 atcatttgtttgtatatgtattaaattt 272  Q
     || ||| ||||||| ||||||||||||    
T  29676778 gtcttttatttgtatgtgtattaaattt 29676751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 40645646 - 40645765
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| || | |||||||||| || |||||||||||||||||  | |||||||||||||||||||||| |||||||||||||||||||| || |    
T  40645646 ccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttgtctgtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtctt 40645745  T
Q  250 ttgtttgtatatgtattaaa 269  Q
    |||||||||| |||||||||    
T  40645746 ttgtttgtatgtgtattaaa 40645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 41727372 - 41727240
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| || | |||||||||| || ||||||||| ||| |||  |||||||||||||||||||||||| |||||||||||||| ||||| || |    
T  41727372 ccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcct 41727273  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    || ||||||| |||||||||||| |||||||||    
T  41727272 ttatttgtatgtgtattaaatttgacttttcat 41727240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 20945429 - 20945302
Alignment:
Q  157 atgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtt 254  Q
    ||||| |||||| || | |||| || ||||||||||||| |||   |||||||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  20945429 atgtaaacaccttttacatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttatgtgttaatattacctaattatcctttgtt 20945330  T
Q  255 tgtatatgtattaaattttacttttcat 282  Q
    ||||| |||||||||||| |||||||||    
T  20945329 tgtatgtgtattaaatttgacttttcat 20945302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 26517331 - 26517217
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| |||||||    
T  26517331 ttgcatttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtcctttatttgtatgtgtatta 26517232  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  26517231 aatttgacttttcat 26517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 50363048 - 50363131
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  50363048 tcagtgtaattaatatgtctgttttatgtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 50363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 29645361 - 29645462
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||| ||||||||||||   |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||    
T  29645361 atttattaagaaatgttgttagtgtaattaatgtatctgttttatgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttc 29645460  T
Q  281 at 282  Q
    ||    
T  29645461 at 29645462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 31819409 - 31819510
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||    
T  31819409 atttcttaagaaaagttatcggtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttc 31819508  T
Q  281 at 282  Q
    ||    
T  31819509 at 31819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 41825238 - 41825139
Alignment:
Q  185 ttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||||| || ||||||    
T  41825238 ttcttaagaaaagttgtcagtgtaattaatgtgtctattttatgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 41825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 44083652 - 44083731
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  44083652 tgtaattaatgtatctattttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcat 44083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 282
Target Start/End: Original strand, 46048492 - 46048626
Alignment:
Q  151 tccttaatgtagacacctattgcctttta-catatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatc 247  Q
    |||||||||||| |||  || |||||||  || ||||||||||||| |||  |||||||||||||||||||||||| ||| |||||||||| ||||| ||    
T  46048492 tccttaatgtaggcactcatcgccttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtattaatattacgaaattgtc 46048591  T
Q  248 atttgtttgtatatgtattaaattttacttttcat 282  Q
     ||||||||||| |||||||||||| |||||||||    
T  46048592 ctttgtttgtatgtgtattaaatttgacttttcat 46048626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 46435846 - 46435735
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||| || ||||||||  |||||||||    
T  46435846 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttg--tatgtatta 46435749  T
Q  268 aattttacttttca 281  Q
    ||||| ||||||||    
T  46435748 aatttgacttttca 46435735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 41308915 - 41308778
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||||| ||||||||| ||  ||  ||||||| || ||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||||| ||    
T  41308915 ccgttctttaatgtaggcatttacggcctttttcacatttcttaaaaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaattt 41308816  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||  ||||||| ||| ||||||||||||  ||||||||    
T  41308815 attctttgtttatatgtgtattaaatttggcttttcat 41308778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 51263105 - 51263186
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  51263105 agtgtaattaatgtgtctgttttatgtgttagtattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 51263186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 26043040 - 26043123
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||| || ||||||||||| |||||||||||| |||||||||    
T  26043040 tcagtgtaattaatatgtctgttttgtgtgttaatgttaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 26043123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 39617335 - 39617252
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  39617335 tcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 39617252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 26121335 - 26121436
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  ||||||||||||||||| |||||| ||||||||||||| |||||| || ||||||||||| ||||||||| || |||||||    
T  26121335 atttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaacttgacttttc 26121434  T
Q  281 at 282  Q
    ||    
T  26121435 at 26121436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 14645972 - 14645892
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||||||| |||| |||||||||||||||||||| | |||||||||||| |||||||||||| | ||||||    
T  14645972 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttgatttttca 14645892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 21932955 - 21933030
Alignment:
Q  207 attaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||    
T  21932955 attaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 21933030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 22659583 - 22659684
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   ||| |||||||||| | | |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  22659583 atttcttaagaaaagttgttagtataattaatgtatttattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttaacttttc 22659682  T
Q  281 at 282  Q
    ||    
T  22659683 at 22659684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 11388144 - 11388225
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| |  ||||||||||| |||||||||||| |||||||||    
T  11388144 agtgtaattaatgtgtctattttgcgtgttaatattaccaaattgtattttgtttgtatgtgtattaaatttgacttttcat 11388225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 29611857 - 29611938
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||| ||||| |||||| || ||||||    
T  29611857 agtgtaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtatcaaatttgacatttcat 29611938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 28477413 - 28477489
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||||||| ||| |||||    
T  28477413 aattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactattcat 28477489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 41740051 - 41739975
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| |||||||| | |||||||    
T  41740051 aattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgaattttcat 41739975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 43187225 - 43187118
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    ||||||||| |||  |||||||||| |||||||||||| ||| |||  || ||||||||||||||||||||| ||| |||||||||| ||||| || |||    
T  43187225 ttaatgtagtcactcattgcctttttcatatttcttaaaaaaagttgtcaatgtaattaatgtgtctgttttgtgtattaatattacgaaattgtccttt 43187126  T
Q  252 gtttgtat 259  Q
    ||||||||    
T  43187125 gtttgtat 43187118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 26243493 - 26243576
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| ||| |||||| ||||||||| |||  ||||| |||||||||||||| |||||||||||| |||||||||    
T  26243493 tcagtgtaattaatatgtttgttttgtgtgttaatgttattaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 26243576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 35055816 - 35055887
Alignment:
Q  208 ttaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||    
T  35055816 ttaatgtgtctattttgtgtgttaatattaccaaattgtcatttgcttgtatgtgtattaaatttgactttt 35055887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 54426029 - 54425958
Alignment:
Q  211 atgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||||| | |||||||    
T  54426029 atgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttatatgtgtattaaatttaatttttcat 54425958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 27047261 - 27047183
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| || ||||||||||| || ||||||||| ||||||    
T  27047261 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactttt 27047183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 48901600 - 48901522
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||| ||||| |||| |||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||    
T  48901600 agtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgactttt 48901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 48903166 - 48903088
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||| ||||| |||| |||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||    
T  48903166 agtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgactttt 48903088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 54556035 - 54555926
Alignment:
Q  175 ttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| |||||||||||| ||||| |   |||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||| | |||||| |||    
T  54556035 tttttcatatttcttaataaatgctgttagtgtaattaatatgtctattttatatgttaattttaccaaattatcatttgtttatatgtatattaatttt 54555936  T
Q  273 tacttttcat 282  Q
     |||||||||    
T  54555935 aacttttcat 54555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 37729108 - 37729031
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||| ||||||||||||| || |||||| ||||||||||| |||||||||||| |||| ||||    
T  37729108 taattaatgtgtctattttgtgtgttaatattatcatattatcttttgtttgtatgtgtattaaatttgacttctcat 37729031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 42891422 - 42891522
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   ||| |||||||| |||||||||| |||||||||||||||||| | || ||||||||||| | |||||||||| |||||||    
T  42891422 atttcttaagaaaagttgttagtataattaatttgtctgttttgtgtgttaatattaccaaactgtcctttgtttgtatgtatattaaatttgacttttc 42891521  T
Q  281 a 281  Q
    |    
T  42891522 a 42891522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 52325586 - 52325505
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||||||||||||||||| |||||| || ||||||| ||| | ||||| |||||| |||||||    
T  52325586 agtgtaattaatgtgtctattttatgtgttaatattatcaaattgtcctttgtttatatgtttattacattttatttttcat 52325505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 27638190 - 27638079
Alignment:
Q  173 ccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaat 270  Q
    |||||| || ||||||||||||| |||   |||||||||||||| ||| |||| |||||||||||||  ||||| || ||||||||||| ||||||||||    
T  27638190 cctttttcacatttcttaagaaaagttattagtgtaattaatgtctctattttgtgtgttaatattataaaattgtcctttgtttgtatgtgtattaaat 27638091  T
Q  271 tttacttttcat 282  Q
    || || ||||||    
T  27638090 ttgacatttcat 27638079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 31531541 - 31531450
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtat 259  Q
    |||| |||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||| |||||| |||||| || |||||||||||    
T  31531541 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttgatattatcaaattgtcttttgtttgtat 31531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 831476 - 831362
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| |||||||||||||||| |||  || |||||||||||||  ||| ||  ||||||||||||||||||| || ||||||| ||| |||||||    
T  831476 ttgcatttttcatatttcttaagaaaagttgtcaatgtaattaatgtgcatgtattgcgtgttaatattaccaaattgtcctttgtttatatgtgtatta 831377  T
Q  268 aattttacttttcat 282  Q
    ||||| | |||||||    
T  831376 aatttgatttttcat 831362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 31474455 - 31474518
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||| ||||||||||||    
T  31474455 taatgtgtctgttttgtgcgttaatattattaaattatcatttgtttgtatgtgtattaaattt 31474518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 42010893 - 42010972
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||  ||||||||||| | | |||||||| |||||||||    
T  42010893 tgtaattaatgtgtctattttgtgtgttaatattatcaaattattctttgtttgtatgtatgttaaatttgacttttcat 42010972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 50525056 - 50524981
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||| ||| | |||| |||||||||||||||||||| || ||||||||||| |||||||||||| ||||||    
T  50525056 gtaattaatatgtatattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 50524981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 50092635 - 50092772
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||  || ||||||||||||  | ||||||||| ||| |||  |||||||||||||||||  ||||| ||| |||||||||| |||||    
T  50092635 ccgtcccttaatgtaagcatctattgccttttttacatttcttaacaaaagttgacagtgtaattaatgtgttggttttgtgtattaatattacaaaatt 50092734  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||| ||||||| ||||||||| ||  ||||||||    
T  50092735 gtcctttatttgtatgtgtattaaaattgtcttttcat 50092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 11140726 - 11140791
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgta 264  Q
    ||||||||| |||||||| |||||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  11140726 tcagtgtaaataatgtgtatgttttgtgtgttagtattaccaaattatcctttgtttgtatgtgta 11140791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 25750552 - 25750628
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||| ||||| |||| ||||||||||||||||| || |  ||||||||||| |||||||||||| ||||||    
T  25750552 tgtaattaatttgtctattttgtgtgttaatattaccaacttgttctttgtttgtatgtgtattaaatttgactttt 25750628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 33287869 - 33287967
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| |||   |||||||||||| ||||| |||| |||||||||||||  ||||| || ||||||||| | |||||||||||| ||||||    
T  33287869 atttcttaagaaaagtttgtagtgtaattaatttgtctattttgtgtgttaatattattaaattgtcctttgtttgtttgtgtattaaatttgactttt 33287967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 35145280 - 35145335
Alignment:
Q  227 tgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||    
T  35145280 tgttaatattacgaaattatcctttgtttgtatttgtattaaatttgacttttcat 35145335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 48309477 - 48309548
Alignment:
Q  211 atgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| |||| | |||||||||||| |||||||| ||||||||||| ||| |||||||| |||||||||    
T  48309477 atgtgtctattttgtatgttaatattacaaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 48309548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 11344582 - 11344651
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||  ||| ||||||| ||||||||||||    
T  11344582 gtgtaattaatgtgtctattttgtgtgttaacattaccaaattattcttt-tttgtatgtgtattaaattt 11344651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 2421128 - 2421185
Alignment:
Q  222 ttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||||||| ||||||    
T  2421128 ttatgtgttaatattacaaaattgtcatttgtttgtatgtatattaaatttgactttt 2421185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 31650743 - 31650690
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtat 259  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||    
T  31650743 aattaatgtgtctattttatgtggtaatattaccaaattgtcatttatttgtat 31650690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 35765749 - 35765686
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    ||||||||||||| |||  ||||||||||||| |||||||||| ||| ||||||||||||||||    
T  35765749 atttcttaagaaaagttatcagtgtaattaatatgtctgttttgtgtattaatattaccaaatt 35765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 26998889 - 26998999
Alignment:
Q  174 cttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaatt 271  Q
    ||||| || ||||||||||||| |||  || | |||||||||| ||| |||| | |||||||||||| ||||| || ||||||||||  |||||||||||    
T  26998889 ctttttcacatttcttaagaaaagttgtcattataattaatgtatctattttgtttgttaatattacgaaattgtcttttgtttgtacgtgtattaaatt 26998988  T
Q  272 ttacttttcat 282  Q
    | | |||||||    
T  26998989 tgatttttcat 26998999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 39931910 - 39931985
Alignment:
Q  207 attaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| | |||| ||||||||  |||  ||||| |||||||||||||| |||||||||||||| |||||||    
T  39931910 attaatgtgtatattttgtgtgttaaggttattaaattgtcatttgtttgtatgtgtattaaattttagttttcat 39931985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 33412056 - 33411977
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| |  ||| ||||  ||||||||||||||  ||||||||    
T  33412056 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttttttctttg--tatgtattaaatttgtcttttcat 33411977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 44338128 - 44338182
Alignment:
Q  225 tgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||||||||| || ||||||| ||| |||||||||||| ||||||    
T  44338128 tgtgttaatattaccaaattgtcctttgtttctatgtgtattaaatttgactttt 44338182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 48213653 - 48213715
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaa 268  Q
    ||||||||||| | |||| |||||||||||||||  |||||||||| ||||||| ||||||||    
T  48213653 aattaatgtgtttattttgtgtgttaatattaccttattatcatttatttgtatgtgtattaa 48213715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 34055982 - 34055895
Alignment:
Q  166 cctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    ||||||||||||| || ||||||||| |||  ||  || |||||||||| |||||||||| |||||||||||||  ||||| ||||||    
T  34055982 cctattgcctttttcacatttcttaaaaaaaattgtcaatgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcattt 34055895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 41543689 - 41543609
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| ||||||||||| |||| |||| ||||||||  ||||| || ||| ||||||| |||||||||||| || ||||||    
T  41543689 gtgtatttaatgtgtctattttgtgtgataatattataaaattgtcttttatttgtatgtgtattaaatttgacatttcat 41543609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 21864331 - 21864401
Alignment:
Q  211 atgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| ||||||||| ||||||||||||||| || ||| ||||||| | |||||||||| | |||||||    
T  21864331 atgtgtctattttatgtgctaatattaccaaattgtc-tttttttgtatgtatattaaatttgaattttcat 21864401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 24714814 - 24714877
Alignment:
Q  17 acaagtaaaatacgctctattcatttttcaactttaacccctaaaccttattttggatgaacaa 80  Q
    ||||| ||||||| || ||||| ||||||||||||| |||||||| |||| || ||||||||||    
T  24714814 acaaggaaaataccctgtattcctttttcaactttagcccctaaagcttaattaggatgaacaa 24714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 28229207 - 28229266
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||| |||||||||||||||| || ||| ||||||| | |||||||||| ||||||    
T  28229207 ttttatgtattaatattaccaaattgtcctttatttgtatgtatattaaatttgactttt 28229266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 28243785 - 28243860
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| | |||| ||||||||||| | |||||| || ||||||| | | |||||||||||| ||||||    
T  28243785 gtaattaatgtgtttattttgtgtgttaatataatcaaattgtcctttgtttatgtgtgtattaaatttaactttt 28243860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 11393945 - 11393995
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    |||||||||||||||||| |||| |||||||||| || |||||| ||||||    
T  11393945 agtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtcattt 11393995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 5504676 - 5504604
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttt 222  Q
    ||||||||||| ||||  || || ||| || |||||||||||||||||  ||||||||||||||| |||||||    
T  5504676 ccttaatgtaggcacccgtttcccttttcacatttcttaagaaatgttgtcagtgtaattaatgtatctgttt 5504604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 383653 - 383709
Alignment:
Q  225 tgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||| ||| |||| |||||||||||||||| ||| |||||| ||||| ||||||||    
T  383653 tgtgtgaattttactaaattatcatttgtttatatgtgtatttaatttaacttttca 383709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 23157116 - 23157152
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatat 235  Q
    ||||||||||||||||||||||||| || ||||||||    
T  23157116 tcagtgtaattaatgtgtctgttttgtgagttaatat 23157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 53717629 - 53717578
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaa 232  Q
    |||||||||||||| ||  || ||||||||||||||||||||| ||||||||    
T  53717629 atttcttaagaaatattgtcaatgtaattaatgtgtctgttttgtgtgttaa 53717578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 5085225 - 5085088
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| |||||||||| || |||| |||||||| |||  |||||||||||||||||||||||| |||||||||||||| |||||    
T  5085225 ccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaatt 5085126  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| |||||||||||| |||||||||    
T  5085125 gtcttttgtttgtatgtgtattaaatttgacttttcat 5085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 5322159 - 5322022
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || |||||||||||| ||||||| |||||||| |||  || ||||||||||||||||||||| |||||| ||||||| |||||    
T  5322159 ccgtcccttaatgtaggcatctattgcctttttcatattttttaagaaaagttatcaatgtaattaatgtgtctgttttgtgtgtttatattacgaaatt 5322060  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     | |||||||||||||||||||||| || |||||||||    
T  5322059 gttatttgtttgtatatgtattaaaattgacttttcat 5322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 16582502 - 16582637
Alignment:
Q  149 gttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattat 246  Q
    |||||||||||||| || | |||| ||||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||| ||||| |    
T  16582502 gttccttaatgtagccatccattgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgt 16582601  T
Q  247 catttgtttgtatatgtattaaattttacttttcat 282  Q
    | ||| ||||||| |||||||||||| |||||||||    
T  16582602 cttttatttgtatgtgtattaaatttgacttttcat 16582637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 29140783 - 29140653
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    ||||||||| || |||||||||||| || ||||||||||||| |||  | |||||||||||||||||||||| ||| |||||||||| ||||| || |||    
T  29140783 ttaatgtagtcatctattgcctttttcacatttcttaagaaaagttgccggtgtaattaatgtgtctgttttgtgtattaatattacaaaattgtccttt 29140684  T
Q  252 gtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| |||||||||||| |||||||||    
T  29140683 gtttgtatgtgtattaaatttgacttttcat 29140653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 48722005 - 48721867
Alignment:
Q  147 ccgttccttaatgtagacacctattgcctttta-catatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaat 243  Q
    |||| ||||||||||| |||| ||||||||||  || ||||||||||||| | |  |||||||||||||||||||||||| |||||||||||||| ||||    
T  48722005 ccgtcccttaatgtaggcacccattgccttttttcacatttcttaagaaaagctgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaat 48721906  T
Q  244 tatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    | || ||||||||||| |||||||||||| |||||||||    
T  48721905 tgtcctttgtttgtatgtgtattaaatttgacttttcat 48721867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 33231807 - 33231944
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || | |||||||||| || ||||||||| ||| |||  |||||||||||||||||||||||| |||||||||||||| |||||    
T  33231807 ccgtcccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaatt 33231906  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| |||||||||| | |||||||||    
T  33231907 gtcctttgtttgtatgtgtattaaatctgacttttcat 33231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 279
Target Start/End: Original strand, 8877733 - 8877873
Alignment:
Q  141 ctctccccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattac 238  Q
    ||||| |||| | |||||||||||||  |||||||||| ||||||| ||||||||  ||  |||| |||||||||||| |||||| ||||||||||||||    
T  8877733 ctctctccgtcctttaatgtagacactcattgcctttttcatattttttaagaaaaattgtcagtataattaatgtgtttgttttgtgtgttaatattac 8877832  T
Q  239 caaattatcatttgtttgtatatgtattaaattttactttt 279  Q
     ||||| |||||||||||||| |||||||||||| ||||||    
T  8877833 gaaattgtcatttgtttgtatgtgtattaaatttgactttt 8877873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 30898689 - 30898574
Alignment:
Q  157 atgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtt 254  Q
    ||||| || ||| |||| |||| || |||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30898689 atgtaaactccttttgcttttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcctttgtt 30898590  T
Q  255 tgtatatgtattaaat 270  Q
    ||||| ||||||||||    
T  30898589 tgtatgtgtattaaat 30898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 23982705 - 23982591
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  || ||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||    
T  23982705 ttgcatttttcacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattatcaaattgacatttgtttgtatatgtatta 23982606  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  23982605 aatttgacttttcat 23982591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 3143375 - 3143507
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| |||| ||||| |||| || ||||||||||||| |||  || ||||||||||||||||| ||| |||||||||||||| ||||| || |    
T  3143375 ccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtcattgtaattaatgtgtctgctttgtgtgttaatattacaaaattgtctt 3143474  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| ||| |||||||||||| |||||||||    
T  3143475 ttgtttttatgtgtattaaatttgacttttcat 3143507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 8984741 - 8984660
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||    
T  8984741 agtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 8984660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 28723733 - 28723652
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  28723733 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcat 28723652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 44652972 - 44652860
Alignment:
Q  169 attgccttttacatatttcttaagaaatgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaa 268  Q
    |||||| ||| || ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||| |  ||||||||||| ||||||||    
T  44652972 attgccattttcacatttcttaagaaatgtt-agtgtaattaatgtgtctgttttgtgttttaatattaccacattgttctttgtttgtatgtgtattaa 44652874  T
Q  269 attttacttttcat 282  Q
    |||| |||||||||    
T  44652873 atttgacttttcat 44652860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 24415024 - 24415104
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  24415024 gtgtaattaatgtatctcttttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcat 24415104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 25269366 - 25269481
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||| ||||| || |||| |||||||| |||  |||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||    
T  25269366 attgtctttttcacattttttaagaaaagttgtcagtgtaaataatgtgtctgttttatgtgttaatattacgaaattttcctttgtttgtatgtgtatt 25269465  T
Q  267 aaattttacttttcat 282  Q
    |||||| |||||||||    
T  25269466 aaatttgacttttcat 25269481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 32047409 - 32047541
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| ||||| |||| || ||||||||||||| |||  ||||||||||||||||| |||||| |||||||||||||| |||||    
T  32047409 ccgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattacgaaatt 32047508  T
Q  245 atcatttgtttgtatatgtattaaattttactttt 279  Q
     |||||||||||  ||||| |||||||| ||||||    
T  32047509 gtcatttgtttg--tatgtgttaaatttgactttt 32047541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 47071041 - 47070960
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||||||| | |||||||    
T  47071041 agtgtaattaatgtgtctattttatgtgttaatattaccaaattgtcatttgtttgtatgcgtattaaatttgatttttcat 47070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 47754722 - 47754641
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  47754722 agtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 47754641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 13723591 - 13723477
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||| ||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| |||||||    
T  13723591 ttgcatttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtattaatattaccaaattatcctttgtttgtatgtgtatta 13723492  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  13723491 aatttgacttttcat 13723477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 44395538 - 44395639
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||||||||||||||||  ||||||||||||| ||| | ||||||||||||||||||| |||||||| ||||||||||| | |||||||||| | |||||    
T  44395538 atttcttaagaaatgttgtcagtgtaattaatatgtttattttatgtgttaatattacaaaattatcctttgtttgtatgtatattaaatttgatttttc 44395637  T
Q  281 at 282  Q
    ||    
T  44395638 at 44395639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 34102351 - 34102440
Alignment:
Q  193 aaatgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||| | |||||||||| |||||||||    
T  34102351 aaattttcattgtaattaatgtgtctgttttgtgtgttaatattatcaaattattctttgtttgtatgtttattaaatttgacttttcat 34102440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 51996958 - 51997058
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  ||||||||||||| ||| |||||| |||||||||||||||||||  || ||||||||||| |||||||||||| |||||||    
T  51996958 atttcttaagaaaagttgtcagtgtaattaatttgtatgttttctgtgttaatattaccaaatcgtcctttgtttgtatgtgtattaaatttgacttttc 51997057  T
Q  281 a 281  Q
    |    
T  51997058 a 51997058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 15512894 - 15512783
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  15512894 ttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 15512795  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  15512794 aatttgactttt 15512783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 28949077 - 28948966
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  28949077 ttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 28948978  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  28948977 aatttgactttt 28948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 32152186 - 32152262
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| |||||||||||||||||||| | |||||||||||| |||||||||||| |||||||||    
T  32152186 aattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttgacttttcat 32152262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 38680478 - 38680569
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||| |||   |||||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  38680478 atttcttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaattt 38680569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 3831016 - 3831151
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattat 246  Q
    |||| |||||||||| ||||||||||| |||| || |||| |||||||| |||    || |||||||| ||| |||| |||||||||||||| ||||| |    
T  3831016 ccgtcccttaatgtaaacacctattgcatttttcacattttttaagaaaagttatcagttattaatgtatctattttgtgtgttaatattacgaaattgt 3831115  T
Q  247 catttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| | | |||||||| |||||||||    
T  3831116 catttgtttgtatgtatgttaaatttgacttttcat 3831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 36084991 - 36085074
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||| ||| ||||||| |||||||||||| |||||||||    
T  36084991 tcagtgtaattaatgtatctgttttgtgtgttaatattaagaaattatcctttatttgtatgtgtattaaatttaacttttcat 36085074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 9675803 - 9675666
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||| |||| |||||  |  |||||||||||| |||  ||||||||||||| |||||| ||| |||||||||||||| |||||    
T  9675803 ccgtcccttaatgtaggcacccattgacttttttacgtttcttaagaaaagttgtcagtgtaattaatttgtctgatttgtgtgttaatattacgaaatt 9675704  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||| ||||||| |||||||||||| ||| |||||    
T  9675703 gtcctttatttgtatgtgtattaaatttgactattcat 9675666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 16395648 - 16395547
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||| ||||||||||||  | ||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||| ||| | |||||| |||||||    
T  16395648 attttttaagaaatgttatcggtgtaattaatgtgtctattttgtatgttaatattaccaaattatcttttgtttgtatgtgtgtaaaatttgacttttc 16395549  T
Q  281 at 282  Q
    ||    
T  16395548 at 16395547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 30336034 - 30336163
Alignment:
Q  155 taatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttg 252  Q
    ||||||||||||  ||||| |||| || ||||||||||||| |||  | ||||||||||||||||| |||| |||||||||||||||||||| || ||||    
T  30336034 taatgtagacactcattgcttttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 30336133  T
Q  253 tttgtatatgtattaaattttacttttcat 282  Q
    ||| |||  |||| |||||| | |||||||    
T  30336134 tttctatgcgtataaaatttgaattttcat 30336163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 46495330 - 46495412
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| || ||| ||||||| | |||||||||| ||||||||    
T  46495330 tcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttatttgtatgtatattaaatttgacttttca 46495412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 15179431 - 15179512
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||||||||||||||||||| ||||||| || |||||||| ||||| || ||||||||||| |||||||||||| |||||||    
T  15179431 tcagtgtaattaatgtgtctattttatgcgtaaatattacaaaattgtcctttgtttgtatgtgtattaaatttgacttttc 15179512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 25063241 - 25063314
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||| ||||||||||||||| |||| || ||||||||||| |||||||||||| |||||||||    
T  25063241 taatgtgtctgttttgtgtgttaatattacctaattgtcctttgtttgtatgtgtattaaatttcacttttcat 25063314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 34696965 - 34696884
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||| || || |||||| |||||||    
T  34696965 tcagtgtaattaatatgtctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgcatgaaatttgacttttc 34696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 281
Target Start/End: Original strand, 47643490 - 47643643
Alignment:
Q  125 tcatatacattgtactctctccccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttt 222  Q
    ||||||| | ||||||||||||  || |||||||||| || ||  |||| |||| || ||||||||||||| |||  ||||||||||||||||| |||||    
T  47643490 tcatataaaatgtactctctcc--gtcccttaatgtaaactccctttgcttttt-cacatttcttaagaaaagttgtcagtgtaattaatgtgtatgttt 47643586  T
Q  223 tatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |  ||||||||||||| ||||| || |||||||| || |||||||||||| ||||||||    
T  47643587 t--gtgttaatattactaaattgtcctttgtttgcatgtgtattaaatttgacttttca 47643643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 4813537 - 4813461
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| ||||||||||||||||||||||  ||||||||||| ||| |||||||| |||||||||    
T  4813537 aattaatgtgtctattttgtgtgttaatattaccaaattattctttgtttgtatgtgtgttaaatttgacttttcat 4813461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 31305342 - 31305422
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| |||| | || ||||||||||||||| || ||||||||||| |||||||||||| |||||||||    
T  31305342 gtgtaattaatgtgtctattttgtatgctaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 31305422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 5852985 - 5852850
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| |||||||||||  ||| |||| ||||||||||||| ||||  || |||  | |||||||||||||||  |||||||||||||||||| | |||||    
T  5852985 ccgtcccttaatgtaggtaccaattgtcttttacatatttgttaaagaaagttgccggtgtaattaatgtgt--gttttatgtgttaatattccgaaatt 5852888  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || |||||||| || |||||||||||| |||||||||    
T  5852887 gtcctttgtttgcatgtgtattaaatttgacttttcat 5852850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 25258325 - 25258431
Alignment:
Q  175 ttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||| |||||||| |||   |||| ||||||||||||| |||||||| || ||||||||||||| || ||||||||||| ||||||||||||    
T  25258325 tttttcatattttttaagaaaagttgttagtgcaattaatgtgtctattttatgtcttgatattaccaaattgtcctttgtttgtatgtgtattaaattt 25258424  T
Q  273 tactttt 279  Q
     ||||||    
T  25258425 aactttt 25258431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 31808052 - 31807981
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  31808052 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgcatgtgtatcaaattt 31807981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 44335310 - 44335369
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgta 258  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  44335310 tcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgta 44335369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 2342934 - 2343008
Alignment:
Q  208 ttaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |||| |||||||||||||||||||| || ||||||||| | |||||||||||| |||||||||    
T  2342934 ttaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtgtgtgtattaaatttgacttttcat 2343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 15911652 - 15911563
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaat 270  Q
    ||||||||||||| |||   |||||| ||||||||||| |||| ||||||||||||||||||| | ||||||||||||| ||||||||||    
T  15911652 atttcttaagaaaagttgttagtgtacttaatgtgtctattttgtgtgttaatattaccaaataaccatttgtttgtatgtgtattaaat 15911563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 32144341 - 32144415
Alignment:
Q  208 ttaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |||| || ||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  32144341 ttaatgtgtctattttgtgcgttaatattaccaaattgtcatttgtttgtatgtgtataaaatttgacttttcat 32144415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 20564798 - 20564879
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||| || |||||||| || |||||||||||| |||||||||    
T  20564798 agtgtaactaatgtgtctactttatgtgttaatattacaaaattgtcttttgtttgaatgtgtattaaatttgacttttcat 20564879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 35366064 - 35365983
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||| |||||| ||| |||| ||||||||||||| |||||| || ||||||||||| |||||||||||| |||||||||    
T  35366064 agtgtaagtaatgtatctattttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 35365983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 52141257 - 52141177
Alignment:
Q  201 agtgtaattaatg--tgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||  ||||| |||| ||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||    
T  52141257 agtgtaattaatgcgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtattaaatttgactttt 52141177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 13145438 - 13145522
Alignment:
Q  198 ttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| || ||||| |||||||||| | |||||||||||||||||| || ||||||||||| || ||||||||| |||||||||    
T  13145438 ttcagtatagttaatatgtctgttttgtatgttaatattaccaaattgtcctttgtttgtatgtgcattaaatttgacttttcat 13145522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 44163253 - 44163321
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||||||||||||||||| |||||| |||||||||||||  ||||| |||||||||||||| |||||||    
T  44163253 tcagtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtatta 44163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 13352837 - 13352915
Alignment:
Q  183 atttcttaagaaatgt--tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtat 259  Q
    ||||||||||||||||  | |||  |||||||||||||||||||||||||||||||| |||||| |||||| |||||||    
T  13352837 atttcttaagaaatgtagttagttcaattaatgtgtctgttttatgtgttaatattagcaaattgtcatttatttgtat 13352915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 278
Target Start/End: Complemental strand, 35001406 - 35001273
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||| ||| |||| |||| ||||| || |||| |||||||| |||  ||||||||| ||  |||||||||| ||||||||| |||  |||||    
T  35001406 ccgtcccttaatctaggcacccattgtctttttcacatttattaagaaaagttgtcagtgtaatcaaaatgtctgttttgtgtgttaatgttatgaaatt 35001307  T
Q  245 atcatttgtttgtatatgtattaaattttacttt 278  Q
     || ||||||||||| |||||||||||| |||||    
T  35001306 gtcctttgtttgtatgtgtattaaatttaacttt 35001273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 51390609 - 51390536
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| |||||||   |||||||||| |||||||||||||| |||||||||||| |||||||||    
T  51390609 aattaatgtgtctattttgtgtgtta---ttaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 51390536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 10842374 - 10842431
Alignment:
Q  225 tgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||    
T  10842374 tgtgttaatattaccaaattatcgtttgtttgtatgtgtgttaaatttgacttttcat 10842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 46591125 - 46591205
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||||| |||||| ||||||||||||| | |||| || ||||||| ||| |||||||||||| | ||||||    
T  46591125 agtgtaattaatgtgtttgttttgtgtgttaatattatcgaattgtcctttgtttctatgtgtattaaatttgatttttca 46591205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 291704 - 291637
Alignment:
Q  212 tgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||| |||| | |||||||||||| ||||| |||||||||||||| |||||||||||| ||||||    
T  291704 tgtgtctattttgtatgttaatattactaaattgtcatttgtttgtatttgtattaaatttaactttt 291637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 41737148 - 41737219
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||  ||||| |||| |||||||||||||||||||| || ||||||||||| ||| ||||||||    
T  41737148 agtgtaattaaaatgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgttttaaattt 41737219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 4818004 - 4817906
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  | ||||||||| |||||  ||||| ||| ||||||||| |||||| || ||||||||||| |||||||||||| |||||||    
T  4818004 atttcttaagaaaagttgtcggtgtaattattgtgt--gttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttc 4817907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 4829804 - 4829706
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  | ||||||||| |||||  ||||| ||| ||||||||| |||||| || ||||||||||| |||||||||||| |||||||    
T  4829804 atttcttaagaaaagttgtcggtgtaattattgtgt--gttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttc 4829707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 6282502 - 6282563
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    ||||||||||||| ||||||||||||||||||  ||||| || ||||||| |||||||||||    
T  6282502 aattaatgtgtctattttatgtgttaatattataaaattgtcctttgtttatatatgtatta 6282563  T

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Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 10160709 - 10160816
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    ||||||||| || ||||||||||||| |||  ||||||||||||||||||||        ||||||||||  ||||  |||||||||||||| |||||||    
T  10160709 ttgcctttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgc-------gttaatattatgaaatattcatttgtttgtatgtgtatta 10160801  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  10160802 aatttgacttttcat 10160816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 4081954 - 4082030
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |  ||| | |||||||||||| |||||||||||||| ||||| |||||||||||| | |||||||    
T  4081954 aattaatgtgtttagtttgtatgttaatattactaaattatcatttgtctgtatgtgtattaaatttgatttttcat 4082030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 28334340 - 28334265
Alignment:
Q  158 tgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgtta 231  Q
    ||||| |||| |||| ||||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||    
T  28334340 tgtagtcacccattgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgtta 28334265  T

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Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 34012078 - 34012134
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgttt 255  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||| || |||||||    
T  34012078 tcagtgcaattaatgtgtctgttttatgtgttaatattatgaaattgtcttttgttt 34012134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 50692399 - 50692490
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtat 259  Q
    ||||| ||| || ||||||||||||| |||  || || ||||||||||||| |||| ||||||| |||||||||||| || |||||||||||    
T  50692399 ttgcccttttcacatttcttaagaaaagttgtcaatgcaattaatgtgtctattttgtgtgttagtattaccaaattgtcctttgtttgtat 50692490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 3143842 - 3143735
Alignment:
Q  175 ttttacatatttcttaagaaatgttca--gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||| |||||||||| ||| |  ||||||||||||||||| ||||  |||||| ||||| |||||| || ||||||||||| | |||||||| |    
T  3143842 tttttcatatgtcttaagaaaagttgatagtgtaattaatgtgtctatttt--gtgttattattatcaaattgtcttttgtttgtatgtttattaaatat 3143745  T
Q  273 tacttttcat 282  Q
    || |||||||    
T  3143744 tatttttcat 3143735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 15457876 - 15457814
Alignment:
Q  220 ttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| |||| |||||||| |||||| |||||||||||||| |||||||||||| | |||||||    
T  15457876 ttttgtgtgataatattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 15457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Original strand, 27531089 - 27531180
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtat 259  Q
    |||| |||| || ||||||||||||| |||  |||| |||||||||||| |||||| ||||||||||||||  |||| |  |||||||||||    
T  27531089 ttgcatttttcacatttcttaagaaaagttgtcagtataattaatgtgtttgttttgtgtgttaatattacttaattgttctttgtttgtat 27531180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 40261618 - 40261694
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| ||||||||||| | |||| ||||||||||||| ||||||  | ||||||  |||||||||||||||| ||||||    
T  40261618 agtgcaattaatgtgtttattttgtgtgttaatattatcaaattgccctttgtt--tatatgtattaaatttgactttt 40261694  T

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Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 3072162 - 3072241
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||| | ||||||||||||||||||  ||||| |  ||| ||| ||| |||||||||||| |||||||||    
T  3072162 agtgcaattaatgtgtttattttatgtgttaatattattaaattgt--tttttttttatgtgtattaaatttgacttttcat 3072241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 9684796 - 9684738
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatat 261  Q
    ||||||||||||||||||||| || ||||||||||| ||||| || ||| ||| |||||    
T  9684796 tgtaattaatgtgtctgttttgtgcgttaatattacaaaattgtcctttatttatatat 9684738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 28679896 - 28679831
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||| |||| |||||||||||||  ||||| |  ||||||||||| ||||||||||||    
T  28679896 aattaatgtgtctattttgtgtgttaatattattaaattgt-ttttgtttgtatgtgtattaaattt 28679831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 47133517 - 47133463
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgt 257  Q
    |||||||||||||| | |||| |||||||||||||  ||||| ||||||||||||    
T  47133517 tgtaattaatgtgtttattttgtgtgttaatattattaaattgtcatttgtttgt 47133463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 34331906 - 34331979
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||| ||||| | || |||  ||||||| ||||||| ||| |||||||||||| |||||||||    
T  34331906 taatgtgtctattttgtgtgtgagtagtactgaattatcttttgtttatatgtgtattaaatttgacttttcat 34331979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 154 - 282
Target Start/End: Complemental strand, 39543794 - 39543661
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgt--tcagtgtaattaatgtgtctgttttatgtgttaa---tattaccaaattatca 248  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||  || |||||||||||||||||||||| || |||||   |||||||||||| ||     
T  39543794 ttaatgtaggcacctattgcctttttcatatttcttaagaaatgttgtccgtgtaattaatgtgtctgttttgtgcgttaatattattaccaaattgtct 39543695  T
Q  249 tttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |||||||||||| |||||||||    
T  39543694 tttgtttgtatgtgtattaaatttgacttttcat 39543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 25185003 - 25185135
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||  |||| |||||||||| || ||||||||||||| |||  |||||||| ||||||||||||||| |||||||||||||| ||||| ||||    
T  25185003 ccttaatgtatgcacccattgcctttttcacatttcttaagaaaagttgtcagtgtaactaatgtgtctgttttgtgtgttaatattacgaaattgtcat 25185102  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| ||||||||||||  ||||||||    
T  25185103 ttgtttgtatgtgtattaaatttgtcttttcat 25185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 25198264 - 25198394
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcattt 251  Q
    ||||||||| || | |||||||||| || ||||||||||||| |||  ||||||||||||||||| |||||| |||||||||||||||||||| || |||    
T  25198264 ttaatgtaggcatccattgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattaccaaattgtccttt 25198363  T
Q  252 gtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| ||||| |||||| |||||||||    
T  25198364 gtttgtatgtgtataaaatttgacttttcat 25198394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 38770325 - 38770188
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||||||||||||||| |||  |||| ||||| |||||||||||||| | |||  ||||||||||||||||| | |||| |||||||||||||| |||||    
T  38770325 ccgttccttaatgtaggcacgcattgtctttttcatatttcttaagataagttgtcagtgtaattaatgtgtttattttgtgtgttaatattacgaaatt 38770226  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     |||||||||||||| |||||||| ||| |||||||||    
T  38770225 gtcatttgtttgtatgtgtattaattttgacttttcat 38770188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 38761491 - 38761359
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| ||| ||||  ||||| ||||||| |||| ||| |||  |||||||||||||||||||||||| |||||||||||||  ||||| ||||    
T  38761491 ccttaatgtaggcacatattatctttttcatatttattaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcat 38761392  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| |||||||||    
T  38761391 ttgtttgtatgtgtattaaatttgacttttcat 38761359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 147 - 279
Target Start/End: Complemental strand, 16002861 - 16002727
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| |||||||||||||||| ||| |||||| || |||| |||||||| |||  | |||||||||||||||| ||||| |||||||||||||  |||||    
T  16002861 ccgtcccttaatgtagacacccatttcctttttcacattttttaagaaaagttgtctgtgtaattaatgtgtcagttttgtgtgttaatattaagaaatt 16002762  T
Q  245 atcatttgtttgtatatgtattaaattttactttt 279  Q
    ||| ||||||||||| |||||||||||| ||||||    
T  16002761 atcctttgtttgtatttgtattaaatttgactttt 16002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 280
Target Start/End: Original strand, 37141700 - 37141829
Alignment:
Q  153 cttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatt 250  Q
    |||||||||  |||||||||| |||| || |||| |||| ||| |||  ||||||||||||||| |||||||| |||||||||||||| ||||| |||||    
T  37141700 cttaatgtaagcacctattgcatttttcacattttttaaaaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcatt 37141799  T
Q  251 tgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||| |||||||||||| |||||||    
T  37141800 tgtttgtatgtgtattaaatttgacttttc 37141829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 41086949 - 41087079
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| |||| |||||||||| || |||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||| |||||| || |    
T  41086949 ccttaatgtag-cacccattgcctttt-cacatttcttaagaaatattgtcagtgtaattaatgtgtctgatttgtgtgttaatattatcaaattttcct 41087046  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||||||||||| | |||||||    
T  41087047 ttgtttgtatgtgtattaaatttgatttttcat 41087079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 24512251 - 24512168
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||| |||||||||||| |||||||||    
T  24512251 tcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 24512168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 43980685 - 43980587
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  43980685 atttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcatttgtttgtatgtgtattaaatttgactttt 43980587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 37601000 - 37600889
Alignment:
Q  173 ccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaat 270  Q
    |||||| || |||| ||||||||||||   ||| ||||||||||||||| |||||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  37601000 cctttttcacattttttaagaaatgttgtaagtataattaatgtgtctgatttatgtgttaatactgccaaattatcttttgtttgtatgtgtattaaat 37600901  T
Q  271 tttacttttcat 282  Q
    || |||||||||    
T  37600900 ttgacttttcat 37600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 2562814 - 2562731
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  2562814 tcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 2562731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 31252739 - 31252656
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| | |||||||||| || |||||||||||| |||||||||    
T  31252739 tcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaataaacatttgtttgcatgtgtattaaatttgacttttcat 31252656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 57326 - 57189
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||| ||| ||| |||||  |||| || ||||||||||||| |||  | |||||||||||||||||||||| |||||||||||||| |||||    
T  57326 ccgtcccttaatataggcacttattgtttttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaatt 57227  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     |  ||| ||||||| |||||||||||| |||||||||    
T  57226 gttctttatttgtatgtgtattaaatttgacttttcat 57189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 36309675 - 36309597
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  36309675 gtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 36309597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 37956090 - 37956226
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| |||||||||||  ||| |||| ||||| || ||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||| || ||    
T  37956090 ccgtcccttaatgtaggtacc-attgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacgaattt 37956188  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| | ||||| |||| |||||||||    
T  37956189 gtcctttgtttgtatgtatattagatttgacttttcat 37956226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 7772485 - 7772617
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    |||||| |||| || |||||| |||||  | |||| |||||||| |||  || ||||||||||||||||||||| |||||||||||||| ||||| || |    
T  7772485 ccttaacgtagccatctattgtcttttttacattttttaagaaaagttgtcattgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcct 7772584  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    || ||||||| |||||||||||| |||||||||    
T  7772585 ttatttgtatgtgtattaaatttcacttttcat 7772617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 31746487 - 31746406
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| |||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||    
T  31746487 agtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 31746406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 24962480 - 24962369
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  24962480 ttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 24962381  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  24962380 aatttaactttt 24962369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 26878843 - 26878733
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    ||||||||| || ||||||||||||| |||   | |||||||||||||||| |||| |||||||||||||||||||| || ||||||||||| | |||||    
T  26878843 ttgcctttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtatatta 26878744  T
Q  268 aattttacttt 278  Q
    ||||| |||||    
T  26878743 aatttgacttt 26878733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 40790793 - 40790893
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  |||||||||||||| ||||||||  ||| |||||||||||||||| ||||||||||||||||||| ||||||| ||| |||    
T  40790793 atttcttaagaaaagttgtcagtgtaattaatgcgtctgtttg-tgtattaatattaccaaattgtcatttgtttgtatatgtaataaatttgactattc 40790891  T
Q  281 at 282  Q
    ||    
T  40790892 at 40790893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 43191552 - 43191478
Alignment:
Q  208 ttaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||||| | |||||||    
T  43191552 ttaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaaattttcat 43191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 36437525 - 36437606
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| |||||||| ||||||||||| || ||||||||||| |||||||||||| |||||||||    
T  36437525 agtgcaattaatgtgtctattttgtgtgttaacattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 36437606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 40517773 - 40517842
Alignment:
Q  210 aatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||| ||||||    
T  40517773 aatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 40517842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 40602123 - 40602042
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| |||||||||||||  |||||||||||||||||| |||||||| ||||||||||| |||||||||||| | |||||||    
T  40602123 agtgcaattaatgtgtcttatttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttgatttttcat 40602042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 12762871 - 12762947
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| |||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  12762871 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 12762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 17933730 - 17933810
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaa-tattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||| |||| |||||||| |||||||||| | |||||||||||||| |||||||||||| |||||||||    
T  17933730 tgtaattaatgtgtctattttgtgtgttaaatattaccaaactgtcatttgtttgtatgtgtattaaatttgacttttcat 17933810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 278
Target Start/End: Complemental strand, 24276670 - 24276562
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    ||||||||| || ||||||||| ||| |||   ||| |||||||||||||| || |  ||||||||||||||||||| |||||||||||||| |||||||    
T  24276670 ttgcctttttcacatttcttaaaaaaagttgttagtataattaatgtgtctattgt--gtgttaatattaccaaattgtcatttgtttgtatgtgtatta 24276573  T
Q  268 aattttacttt 278  Q
    |||||||||||    
T  24276572 aattttacttt 24276562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 34882699 - 34882775
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||| ||| |||||||| |||||||||    
T  34882699 aattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtgttaaatttgacttttcat 34882775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 38203073 - 38202993
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| ||| |||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| | |||||||    
T  38203073 gtgtaattaatatgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 38202993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 3113617 - 3113534
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||| || ||||||| ||| |||||||||||| | |||||||    
T  3113617 tcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattgtcttttgtttatatgtgtattaaatttaatttttcat 3113534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 31673621 - 31673700
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||||||||||||| | |||| | ||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||    
T  31673621 gtgtaattaatgtgtttattttgtatgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgactattca 31673700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 3006886 - 3006785
Alignment:
Q  180 catatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactt 277  Q
    |||||||||||||||| |||   ||| |||||||| ||||| ||||||||||||||||||| |||||||||||| | ||||| ||||||||| || ||||    
T  3006886 catatttcttaagaaaagttgttagtataattaatatgtctattttatgtgttaatattactaaattatcatttatctgtatgtgtattaaaattgactt 3006787  T
Q  278 tt 279  Q
    ||    
T  3006786 tt 3006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 14577754 - 14577653
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||||||||||||||||| |||| | |||||||||||||||||| |  ||||||||||| |||||||||||| | |||||    
T  14577754 atttcttaagaaaagttgttagtgtaattaatgtgtctattttgtttgttaatattaccaaattgtactttgtttgtatgtgtattaaatttgatttttc 14577655  T
Q  281 at 282  Q
    ||    
T  14577654 at 14577653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 40337329 - 40337192
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || | |||| ||||| || |||||||| |||| |||  |||| |||||||||||| |||||| | |||||||||||| |||||    
T  40337329 ccgtcccttaatgtaggcatccattgtctttttcacatttcttatgaaaagttatcagtataattaatgtgtatgttttgtatgttaatattacaaaatt 40337230  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| |||||| || || |||||||||    
T  40337229 gtcctttgtttgtatgtgtatttaaattgacttttcat 40337192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 4274039 - 4273955
Alignment:
Q  154 ttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatatt 236  Q
    ||||||||||||| ||||| ||||| || |||||||||||||| ||   |||||||||||||||| |||||||||||||||||||    
T  4274039 ttaatgtagacacgtattgtctttttcacatttcttaagaaatattgttagtgtaattaatgtgtttgttttatgtgttaatatt 4273955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 7172196 - 7172324
Alignment:
Q  156 aatgtagacacctattgccttttacatatttcttaagaaa--tgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgt 253  Q
    |||||| || ||| |||| |||| || |||||||||||||  | ||  ||||||||||||||||| |||| |||||||||||||  ||||| ||||||||    
T  7172196 aatgtaaaccccttttgcttttttcacatttcttaagaaaactttttggtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcatttgt 7172295  T
Q  254 ttgtatatgtattaaattttacttttcat 282  Q
    |||||| || |||||| || |||||||||    
T  7172296 ttgtatgtgcattaaaattgacttttcat 7172324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 14847002 - 14846925
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||||||| ||| || ||||||||||||| ||| || ||||||||||| |||||||||||| ||||||    
T  14847002 gtgtaattaatgtgtctgctttgtgcgttaatattaccatattgtcttttgtttgtatgtgtattaaatttgactttt 14846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 34157951 - 34158012
Alignment:
Q  211 atgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  34157951 atgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 34158012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 281
Target Start/End: Complemental strand, 45183940 - 45183863
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| || ||||||| ||| |||||||||||| ||||||||    
T  45183940 gtaataaatatgtttgttttatgtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgacttttca 45183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 5191626 - 5191550
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||||||||||||||||||| ||  |||||| ||| |||||||||||| | |||||||    
T  5191626 aattaatgtgtctgttttgtgtgttaatattaccaaattgtccattgtttatatgtgtattaaatttgatttttcat 5191550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 14739454 - 14739522
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaat 270  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||| | ||||||||||    
T  14739454 gtgtaattaatgtgtttattttatatgttaatattaccaaattatcctttgtttgtgtgtgtattaaat 14739522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 30262620 - 30262540
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||| ||||||||||||| |||| | |||||||||||||||||| |||||||||||||| ||| |||||| | ||||||||    
T  30262620 agtgcaattaatgtgtctattttgtatgttaatattaccaaattgtcatttgtttgtatgtgtcttaaatctaacttttca 30262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 38773487 - 38773349
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaa---tgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaat 243  Q
    |||| ||||||||||| || | |||| ||||| || ||||||||| |||   |  |||||| |||||||||||||||||| |||||||| ||||| ||||    
T  38773487 ccgtcccttaatgtaggcaaccattgtctttttcacatttcttaaaaaaaagttgtcagtgcaattaatgtgtctgttttgtgtgttaacattacgaaat 38773388  T
Q  244 tatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    | || ||||||||||| ||||| |||||| | |||||||    
T  38773387 tgtcttttgtttgtatgtgtatgaaatttgatttttcat 38773349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 45203763 - 45203863
Alignment:
Q  183 atttcttaagaaatgttc-agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||||| ||  |||| ||||||||||||| |||| | ||||||||||||||| || || |||||||||||  ||||||||||| ||||||||    
T  45203763 atttcttaagaaattttttagtgcaattaatgtgtctattttgtatgttaatattaccaacttgtcctttgtttgtatgcgtattaaatttgacttttca 45203862  T
Q  282 t 282  Q
    |    
T  45203863 t 45203863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 44255480 - 44255555
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||| || |||| ||||||||||||| |||||| |||||||||||||  |||||||||||| ||||||    
T  44255480 gtaattaatgtgccttttttgtgtgttaatattatcaaattgtcatttgtttgtacgtgtattaaatttgactttt 44255555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 885484 - 885565
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||||||||| | |||||||||  ||||||||||||| |||||| || ||||||||||| |||||||||||| ||||||||    
T  885484 tcagtgtaattattatgtctgtttg-tgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgacttttca 885565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 10396295 - 10396233
Alignment:
Q  218 tgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    |||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||    
T  10396295 tgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttc 10396233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 25888599 - 25888700
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||||||||||| ||||| |||| | ||||||||||| || ||| |||||||||||||| |||||||||||| | |||||    
T  25888599 atttcttaagaaaagttgttagtgtaattaatatgtctattttgtatgttaatattatcatattgtcatttgtttgtatgtgtattaaatttgatttttc 25888698  T
Q  281 at 282  Q
    ||    
T  25888699 at 25888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 35794777 - 35794847
Alignment:
Q  212 tgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||| |||| ||| ||||||||| |||||| |||||||||||||| |||||||||||| |||||||||    
T  35794777 tgtgtctattttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 35794847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 45185347 - 45185269
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||| |||||||||||||||||| ||||||||| |||||| || ||||||||||| |||||| | ||| ||||||||    
T  45185347 tgtaataaatgtgtctgttttatgtattaatattatcaaattgtcctttgtttgtatgtgtattcattttgacttttca 45185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 1177238 - 1177157
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||| | | |||||||||| ||||| || ||| ||||||| |||||||||||| | |||||||    
T  1177238 agtgtaattaatgtgtctgttttgtatattaatattacgaaattgtcttttatttgtatgtgtattaaatttgatttttcat 1177157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 14906627 - 14906684
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtata 260  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  14906627 tgtaattaatatgtctattttgtgtgttaatattaccaaattatcctttgtttgtata 14906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 22590399 - 22590480
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| ||||||||||| |||||||| ||  ||||||||||| || |||||||| |||||||||    
T  22590399 agtgcaattaatgtgtctattttttgtgttaatatcaccaaattgtccattgtttgtataagtgttaaatttgacttttcat 22590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 23399835 - 23399778
Alignment:
Q  225 tgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  23399835 tgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 23399778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 12998804 - 12998694
Alignment:
Q  174 cttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaatt 271  Q
    ||||| || ||||||||||||| |||  ||||  ||||||||||  | |||| ||||| |||||||| ||||| || ||||||||||| |||||||||||    
T  12998804 ctttttcacatttcttaagaaaagttgtcagttcaattaatgtgcatattttgtgtgtgaatattactaaattgtcctttgtttgtatgtgtattaaatt 12998705  T
Q  272 ttacttttcat 282  Q
    | || ||||||    
T  12998704 tgacctttcat 12998694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 14522686 - 14522643
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  14522686 agtgtaattaatgtgtatgttttgtgtgttaatattaccaaatt 14522643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 35709183 - 35709100
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| |||||||||||  ||||||||||||||||| |||||| || || || | | | |||||||||||| |||||||||    
T  35709183 tcagtgtagttaatgtgtctagtttatgtgttaatattatcaaattgtctttcgtatatgtgtgtattaaatttgacttttcat 35709100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 45283862 - 45283827
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattac 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  45283862 tgtaattaatgtgtctgttttatgtgttaatattac 45283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 279
Target Start/End: Complemental strand, 1769579 - 1769452
Alignment:
Q  153 cttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatt 250  Q
    |||||||||| || | ||| | |||| || |||| ||||||||||||  |||||||||||||||     |||| | |||||||||||||| ||| |||||    
T  1769579 cttaatgtaggcatccattacttttttcacattttttaagaaatgttatcagtgtaattaatgtactccttttgtatgttaatattaccacattgtcatt 1769480  T
Q  251 tgtttgtatatgtattaaattttactttt 279  Q
    ||||||||| || ||||||||| ||||||    
T  1769479 tgtttgtatgtg-attaaatttgactttt 1769452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 27589 - 27660
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||| || |||| |||| |||||||||| ||| |||| ||||| |||||||||| | ||||||||||||||    
T  27589 agtgttatgaatgcgtctattttatgtgtgaatgttactaaattgtcatttgtttatgtatgtattaaattt 27660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 2031262 - 2031321
Alignment:
Q  223 tatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| | |||||| || |||||| |||||||||||||||| || |||||||    
T  2031262 tatgtgttaatataatcaaattgtcctttgttcgtatatgtattaaattatatttttcat 2031321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 12894280 - 12894205
Alignment:
Q  207 attaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| |||| | ||  |||||||||| ||| |||||||||||||| |||||| | ||| |||||||||    
T  12894280 attaatgtgtctattttgtatggaaatattaccatattgtcatttgtttgtatttgtatttagtttgacttttcat 12894205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Complemental strand, 16644152 - 16644047
Alignment:
Q  169 attgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    ||||| |||| || ||||||||||||| |||   |||||||||||||||| | |||| ||||||||||| || ||||| |  ||||| ||||| ||| ||    
T  16644152 attgcatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtatattttgtgtgttaatatcactaaattgttctttgtctgtatgtgtgtt 16644053  T
Q  267 aaattt 272  Q
    ||||||    
T  16644052 aaattt 16644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 41541581 - 41541652
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| |||| ||||| ||||||| |||||| || ||| |||  ||||||||||||||| |||||||||    
T  41541581 taatgtgtctattttgtgtgtcaatattatcaaattgtcctttattt--atatgtattaaatttgacttttcat 41541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 23280699 - 23280756
Alignment:
Q  225 tgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| ||||| || ||||||||||| | |||||||||| | |||||||    
T  23280699 tgtgttaatattactaaattgtcctttgtttgtatgtttattaaatttgatttttcat 23280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 9718309 - 9718182
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || | ||||| |||| || |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  9718309 ccgtcccttaatgtagccatccattgcatttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 9718210  T
Q  245 atcatttgtttgtatatgtattaaattt 272  Q
    ||  ||||||||||| ||||||||||||    
T  9718209 attctttgtttgtatgtgtattaaattt 9718182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 8065209 - 8065072
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| | || |||||| ||| || ||||| |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  8065209 ccgtcccttaatgtaggctcccattgcccttttcacatttcctaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaatt 8065110  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||| ||||||||||| |||||||| ||| | |||||||    
T  8065109 atcctttgtttgtatgtgtattaactttgatttttcat 8065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 41665673 - 41665815
Alignment:
Q  141 ctctccccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattac 238  Q
    ||||| |||| ||||||||||| |||  ||||  |||| || |||||||||||||||||  |||||||||||||||||||||||| |||||||||| ||     
T  41665673 ctctctccgtcccttaatgtaggcactcattgtttttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatagtat 41665771  T
Q  239 caaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| || ||||||||||| |||||||||||| |||||||||    
T  41665772 caaattgtcctttgtttgtatgtgtattaaatttaacttttcat 41665815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 27297550 - 27297682
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaa---tgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatca 248  Q
    |||||||||| || ||  |||| |||| || |||||||||||||   |||| ||||||||||||||||||||||| |||||||||||||| ||||||||     
T  27297550 ccttaatgtaaaccccctttgcttttttcacatttcttaagaaaaactgtt-agtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcc 27297648  T
Q  249 tttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| |||||||||||| |||||||||    
T  27297649 tttgtttgtatgtgtattaaatttgacttttcat 27297682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 44424563 - 44424700
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| |||  ||||| |||| || ||||||||||||| |||   ||||||||||||||||||||||| | |||||||||||| |||||    
T  44424563 ccgtcccttaatgtaggcactcattgcatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttgtatgttaatattacgaaatt 44424662  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||||||||||| |||||||||||| |||||||||    
T  44424663 gtcctttgtttgtatgtgtattaaatttgacttttcat 44424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 152 - 282
Target Start/End: Original strand, 15851504 - 15851636
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    |||||||||||||| |||||| ||||| || ||||||||||||| |||   ||||||||||||||||||||||| |||||||||||||  ||||| || |    
T  15851504 ccttaatgtagacatctattgtctttttcacatttcttaagaaaagttgtgagtgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcct 15851603  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| ||| |||||||||||| | |||||||    
T  15851604 ttgtttatatgtgtattaaatttgaattttcat 15851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 3237749 - 3237828
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||    
T  3237749 tgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaatttgacttttcat 3237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 37355061 - 37355141
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||    
T  37355061 gtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 37355141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 28265065 - 28264951
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  ||||||||||||||||| |||||| || ||||||||||||||||| |||||||||||||| | |||||    
T  28265065 ttgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcatttgtttgtatgtatatta 28264966  T
Q  268 aattttacttttcat 282  Q
    ||||| ||| |||||    
T  28264965 aatttgactattcat 28264951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 31644525 - 31644442
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| | |||||||    
T  31644525 tcagtttaattaatgtgtctgttttttgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 31644442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 45214716 - 45214830
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||  ||||||  | ||||||||||| |||||||    
T  45214716 ttgcatttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattttcaaattgccctttgtttgtatgtgtatta 45214815  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  45214816 aatttaacttttcat 45214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 24774889 - 24774970
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||    
T  24774889 agtgtaattaatgtatctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 24774970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 35178925 - 35178793
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| |||| ||||  |||| || ||||||||||||| |||  ||||||| ||||||||| |||||| |||| ||||||||| ||||| || |    
T  35178925 ccttaatgtaggcacccattgtttttttcacatttcttaagaaaagttgtcagtgtagttaatgtgtatgttttgtgtgataatattacgaaattgtctt 35178826  T
Q  250 ttgtttgtatatgtattaaattttacttttcat 282  Q
    || ||||||| |||||||||||| |||||||||    
T  35178825 ttatttgtatttgtattaaatttgacttttcat 35178793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 35241823 - 35241711
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    ||||||||||  | ||||| |||||||||||  | |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||  ||| |    
T  35241823 attgccttttttacatttcataagaaatgttgtctgtgtaattaatgtgtctgttttgtttgttaatattatcaaattatcatttgtttgtatgcgtaat 35241724  T
Q  267 aaattttactttt 279  Q
    |||||| ||||||    
T  35241723 aaatttgactttt 35241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 38449793 - 38449724
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  38449793 tgtaattaatgtgtctgttttgtgtattaatattatcaaattatcatttgtttgtatgtgtattaaattt 38449724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 7255626 - 7255706
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||| | |||||||||||| |||||||||    
T  7255626 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattatcctttgattgtttgtgtattaaatttgacttttcat 7255706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 17251092 - 17250961
Alignment:
Q  153 cttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatt 250  Q
    ||||||||||  | |||||| ||||| || |||| |||||||| |||   ||| ||||||||||||||||||| |||||||||||||| ||||| |||||    
T  17251092 cttaatgtaggtatctattgtctttttcacattttttaagaaaagttgttagtataattaatgtgtctgttttgtgtgttaatattacaaaattgtcatt 17250993  T
Q  251 tgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| |||||| || || |||||||||    
T  17250992 tgtttgtatgtgtatttaaattgacttttcat 17250961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 17663615 - 17663726
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   ||||||||||||||| || ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  17663615 ttgcttttttcacatttcttaagaaaagttgttagtgtaattaatgtgcctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 17663714  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  17663715 aatttgactttt 17663726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 11459178 - 11459257
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||| | ||||||    
T  11459178 gtgtaaataatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatatgtattaaatttgatttttca 11459257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 279
Target Start/End: Original strand, 28733798 - 28733925
Alignment:
Q  152 ccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcat 249  Q
    ||||||||||| |||| |||  ||||| || |||| ||||||||  ||  | ||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  28733798 ccttaatgtaggcacccattttctttttcacattttttaagaaaaattgtcggtgtaattaatgtgtctgttttatgt--taatattaccaaattgtcat 28733895  T
Q  250 ttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||| ||||| |||||| ||||||    
T  28733896 ttgtttgtatgtgtataaaatttgactttt 28733925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 38982146 - 38982071
Alignment:
Q  207 attaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| |||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||    
T  38982146 attaatgtatctgttttgtgtgttaatattaccaaattattttttgtttgtatgtgtattaaatttgacttttcat 38982071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 2131761 - 2131862
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||| ||||||  ||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  2131761 atttcttaagaaaagttgttagtgcaattaacatgtctattttgtgtgttaatattaccaaattatcttttgtttgtatctgtattaaatttgacttttc 2131860  T
Q  281 at 282  Q
    ||    
T  2131861 at 2131862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 13534383 - 13534471
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaata 234  Q
    |||| ||||||||||| ||||||||||||||| || |||||||||||||||||  ||||||||||||||||| |||||| ||||||||||    
T  13534383 ccgtcccttaatgtaggcacctattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtttgttttgtgtgttaata 13534471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 14527650 - 14527728
Alignment:
Q  204 gtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| | |||||||||| | |||||||    
T  14527650 gtaattaatgtgtctattttgtgtgttaatattaccgaattatcatttgtttgtatgtatattaaatttgatttttcat 14527728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 44274746 - 44274685
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgta 264  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  44274746 tgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcatttgtttgtatgtgta 44274685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 44421471 - 44421544
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||||||| |||||||| | |||||||||||| ||||| |||||||||||||| ||||||||||||    
T  44421471 tcagtgtaattaatgtatctgttttgtttgttaatattactaaattgtcatttgtttgtatgtgtattaaattt 44421544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 375425 - 375345
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||| |||| ||||||| ||||| |||||| |||||||||||||| |||||||||||| | |||||||    
T  375425 gtgtaattaatgtgtctattttgtgtgttagtattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 375345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 14420701 - 14420780
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttca 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || |||||| ||||| ||||||||    
T  14420701 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgcatgtgtatt-aatttaacttttca 14420780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 4033583 - 4033676
Alignment:
Q  181 atatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||| |||   |||||||||||||| |||||||| |||||||||||||| ||||| |  ||||||||||| ||||||||||||    
T  4033583 atatttcttaagaaaagttattagtgtaattaatgtttctgttttctgtgttaatattactaaattgttctttgtttgtatgtgtattaaattt 4033676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 26512099 - 26512173
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||| | ||||||||||||||||||| ||||| || ||||||||||| |||||||||||| ||||||    
T  26512099 taattaatgtgtttattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 26512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 11071692 - 11071773
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| |||||||||||||  |||||||||||||||||| ||||| || |||| |||||| |||||||||||| |||||||||    
T  11071692 agtgcaattaatgtgtctaatttatgtgttaatattactaaattgtcctttgcttgtatgtgtattaaatttgacttttcat 11071773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 28190626 - 28190703
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| ||| | |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  28190626 taattaatatgtttattttttgtgttaatattaccaaattgtcatttgtttgtatatgtattaagtttaatttttcat 28190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 34330030 - 34330107
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||  ||||||| |||||||||||||| ||||| || ||||||||||| |||||||||||| |||||||||    
T  34330030 taattaatgtacctgttttgtgtgttaatattacaaaattgtcctttgtttgtatgtgtattaaatttaacttttcat 34330107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 43650056 - 43650129
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||| |  ||||||||||| ||||||||||||    
T  43650056 tcagtgtaattaatgtgtctgttttgtatgttaatattactaaattgttctttgtttgtatgtgtattaaattt 43650129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 282
Target Start/End: Original strand, 3326698 - 3326829
Alignment:
Q  153 cttaatgtagacacctattgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatt 250  Q
    |||||||||| ||| ||||||||||| ||||||| |||| |||  ||  | |||||||||||||||||||||| | | |||||||||  ||||| || ||    
T  3326698 cttaatgtaggcacttattgcctttttcatattttttaaaaaaaattgtcggtgtaattaatgtgtctgttttgtatattaatattattaaattgtcctt 3326797  T
Q  251 tgtttgtatatgtattaaattttacttttcat 282  Q
    ||||| ||| ||||| |||||| |||||||||    
T  3326798 tgtttatatgtgtataaaatttaacttttcat 3326829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 23464704 - 23464788
Alignment:
Q  198 ttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||| |||||||||||||| |||| || || ||||||| |||||| || ||| |||||||||||||||||||| |||||||||    
T  23464704 ttcagtataattaatgtgtctattttgtgcgtaaatattatcaaattgtcctttatttgtatatgtattaaatttgacttttcat 23464788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 2521381 - 2521303
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||| ||||||||||| ||||||||| ||||||||  ||||| || ||||||||||| |||||||||||| ||||||    
T  2521381 agtgtagttaatgtgtctattttatgtggtaatattattaaattgtcttttgtttgtatgtgtattaaatttgactttt 2521303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 4398605 - 4398547
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtat 259  Q
    |||||||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||    
T  4398605 agtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcatttgtttgtat 4398547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 20362007 - 20362084
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| |||| ||||||| ||||||    
T  20362007 agtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgta-taaatttgactttt 20362084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 41865744 - 41865817
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||| |||| |||||||| ||||||||||||||  |||||||||| |||||||||||| ||||||    
T  41865744 taattaatgtgtctattttgtgtgttaacattaccaaattatc-cttgtttgtatgtgtattaaatttgactttt 41865817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 247684 - 247765
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| |||||||||||||  |||||  | ||||||||||| | |||||||||| |||||||||    
T  247684 agtgtaattaatgtgtctattttgtgtgttaatattataaaattgccctttgtttgtatgtatattaaatttgacttttcat 247765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 279
Target Start/End: Original strand, 21012839 - 21012955
Alignment:
Q  165 acctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatg 262  Q
    |||| |||| |||| || ||||||||||||| |||   |||| ||||||||||| | |||| ||||||||||||| ||||||||| |||||||||||       
T  21012839 accttttgcatttttcaaatttcttaagaaaagttgttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattatcctttgtttgtatgca 21012938  T
Q  263 tattaaattttactttt 279  Q
    |||||||||| ||||||    
T  21012939 tattaaatttgactttt 21012955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 32677504 - 32677580
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| ||||||| |||||||||  |||||| ||||||||||||| ||||| ||||||| | |||||||    
T  32677504 aattaatgtgtctattttatgggttaatattttcaaattgtcatttgtttgtacatgtactaaatttgatttttcat 32677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 35453814 - 35453735
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||||| |||||||||||| ||||| |  ||||||  | |||||||||||||| |||||||||    
T  35453814 agtgtaattaatgtgtctattttatatgttaatattactaaattgttctttgtt--tttatgtattaaatttaacttttcat 35453735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 1246528 - 1246416
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||| ||||| || ||||||||| ||| |||  |||| ||||||| |||| |||||| |||||||||||||  ||||| |  ||||||||||| ||||||    
T  1246528 attgtctttttcacatttcttaaaaaaagttgtcagtataattaacgtgtttgttttgtgtgttaatattatgaaattgttctttgtttgtatgtgtatt 1246429  T
Q  267 aaattttactttt 279  Q
    |||||| ||||||    
T  1246428 aaatttgactttt 1246416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 2048908 - 2048833
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||| |||||| ||| ||||||||||||| || ||||||||||| ||||||||||| |||||||||||| ||||||    
T  2048908 gtgtaaataatgtctctattttatgtgttaacat-accaaattatc-tttgtttgtatgtgtattaaatttgactttt 2048833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 16808904 - 16808823
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||| | |||||||| |||||||||| ||||| |||||||||||||| | ||||||| || | |||||||    
T  16808904 agtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcat 16808823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 16848185 - 16848104
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||| | |||||||| |||||||||| ||||| |||||||||||||| | ||||||| || | |||||||    
T  16848185 agtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcat 16848104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 25731263 - 25731186
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| ||| || ||| ||||||||||||| ||||||||| ||||||||||| | |||||||||| | |||||||    
T  25731263 taattaatatgtttggtttgtgtgttaatattatcaaattatcttttgtttgtatgtatattaaatttgatttttcat 25731186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 40346157 - 40346081
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||   |||| |||||||||||||| ||||| || ||| ||||||| |||||||||||| |||||||||    
T  40346157 aattaatgtgttcattttgtgtgttaatattactaaattgtcttttatttgtatgtgtattaaatttgacttttcat 40346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 45150812 - 45150736
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||   |||| ||||||||||||||  |||| || ||||||||||| |||||||||||| |||||||||    
T  45150812 aattaatgtgttcattttgtgtgttaatattactcaattgtcctttgtttgtatgtgtattaaatttgacttttcat 45150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 6275648 - 6275578
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||||||| |||| |||||||| ||||  ||||| || ||||||||||||||||||||||||    
T  6275648 agtgcaattaatgtgtctattttgtgtgttaa-attatgaaattgtcttttgtttgtatatgtattaaattt 6275578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 43119424 - 43119369
Alignment:
Q  227 tgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||| | |||||||    
T  43119424 tgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 43119369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 8384082 - 8384001
Alignment:
Q  174 cttttacatatttcttaagaaatgt--tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgt 253  Q
    ||||| ||||||||||||||||  |  | |||| ||||||||||| | |||| |||||||||||||||||||| ||||||||    
T  8384082 ctttttcatatttcttaagaaaaatagttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgt 8384001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 43709943 - 43710021
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||| |||||||| |||| |||| ||||||||||||||  |||| || ||||||| ||| ||||||||| |||||||||    
T  43709943 agtgcaattaatgcgtctattttgtgtgttaatattacttaattgtcctttgtttatatgtgtattaaaatttactttt 43710021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 4758054 - 4758127
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||||| | |||| |||||||||||||  ||||| || ||||||| ||| |||||||||||| |||||    
T  4758054 taattaatgtgtttattttgtgtgttaatattatgaaattgtcctttgtttttatgtgtattaaatttgacttt 4758127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 6597882 - 6597950
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||| ||||| |||| |||||||| ||||||||| |||| ||| ||||||| ||||||||||||    
T  6597882 tgtaattaatatgtctattttgtgtgttaacattaccaaaatatccttt-tttgtatgtgtattaaattt 6597950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 8393234 - 8393303
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||| |||||| ||||||||||||| |||||| |  ||||||||||| ||| ||||||||    
T  8393234 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaattt 8393303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 36846781 - 36846850
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||| |||||| ||||||||||||| |||||| |  ||||||||||| ||| ||||||||    
T  36846781 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaattt 36846850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 44462660 - 44462591
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||| |||||| ||||||||||||| |||||| |  ||||||||||| ||| ||||||||    
T  44462660 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaattt 44462591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 27749516 - 27749579
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    ||||||||||||| |||  ||||||||||||| |||||||||| ||| |||||||||| |||||    
T  27749516 atttcttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtattaatattactaaatt 27749579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 43638877 - 43638821
Alignment:
Q  226 gtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||||||||||| ||| ||| |||||||||||| | |||||||    
T  43638877 gtgttaatattacaaaattatcatttatttatatgtgtattaaatttgatttttcat 43638821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 3645314 - 3645428
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   ||| || ||||||||||| |||| ||| |||||||||| ||||| || || |||||| | | |||||    
T  3645314 ttgcttttttcacatttcttaagaaaagttgttagtttacttaatgtgtctattttgtgtattaatattactaaattgtccttcgtttgtgtgtatatta 3645413  T
Q  268 aattttacttttcat 282  Q
    ||||| |||||||||    
T  3645414 aatttgacttttcat 3645428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 7278696 - 7278623
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||||||||||||| ||| |||||| ||||   |||||| ||||||  | ||||||||||| ||||||||||||    
T  7278696 tcagtgtaattaatatgtttgttttgtgtgaatatattatcaaattgccctttgtttgtatgtgtattaaattt 7278623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 15578160 - 15578091
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||||| |||||| ||||||||||||| |||||| |  ||| ||||||| ||| ||||||||    
T  15578160 tgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttatttgtatgtgttttaaattt 15578091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 7258017 - 7257941
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||| |||||  ||| |||||||||  ||||| ||||| |||||||  ||||| |||||| ||||||    
T  7258017 tgtaattaatgtgtttgtttagtgtattaatattattaaattgtcattcgtttgtacgtgtataaaatttgactttt 7257941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 279
Target Start/End: Complemental strand, 42250957 - 42250882
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||||||| |||| ||| ||||| ||   ||||| |||||| ||| ||| |||||||||||| ||||||    
T  42250957 agtgtaattaatgtgtctattttgtgttttaatgtt---aaattgtcatttatttatatgtgtattaaatttgactttt 42250882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 1763804 - 1763917
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| |||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||||    
T  1763804 ttgcttttttcatatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtatta 1763903  T
Q  268 aattttacttttca 281  Q
    ||||| ||||||||    
T  1763904 aatttgacttttca 1763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 16350543 - 16350626
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  16350543 tcagtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcat 16350626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 16327127 - 16327228
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||  || | ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  16327127 atttcttaagaaaagttgtcaatataattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttc 16327226  T
Q  281 at 282  Q
    ||    
T  16327227 at 16327228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 9461283 - 9461398
Alignment:
Q  169 attgccttttacatatttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||| ||||| || |||| ||||||||||||  | ||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||| ||||||    
T  9461283 attgtctttttcacatttattaagaaatgttgtcggtgtaattaatgtgtttgttttatgtgttaatattactaaattattctttgtttgtatgtgtatt 9461382  T
Q  267 aaattttacttttcat 282  Q
    |||||| |||||||||    
T  9461383 aaatttgacttttcat 9461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 15981819 - 15981899
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||| |||||||| |||||||||    
T  15981819 gtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcattagtttgtatgtgtcttaaatttaacttttcat 15981899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 30466049 - 30465969
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  30466049 gtgtaattaatatgtttgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcat 30465969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 12514667 - 12514586
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||    
T  12514667 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 12514586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 34513292 - 34513219
Alignment:
Q  209 taatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||    
T  34513292 taatgtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtattaaatttgacttttcat 34513219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 19838922 - 19839033
Alignment:
Q  170 ttgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatta 267  Q
    |||| |||| || ||||||||||||| |||   |||||| ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  19838922 ttgcttttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtatta 19839021  T
Q  268 aattttactttt 279  Q
    ||||| ||||||    
T  19839022 aatttgactttt 19839033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 11302845 - 11302959
Alignment:
Q  169 attgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtatt 266  Q
    |||| ||||| || ||||||||||||| |||   ||| ||||||||||||||||||| |||||||||||||| ||||| || |||||||| || ||||||    
T  11302845 attgtctttttcacatttcttaagaaaagttgttagtataattaatgtgtctgttttttgtgttaatattacaaaattgtcctttgtttgcatgtgtatt 11302944  T
Q  267 aaattttacttttca 281  Q
    |||||| ||||||||    
T  11302945 aaatttgacttttca 11302959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 282
Target Start/End: Original strand, 5895699 - 5895836
Alignment:
Q  147 ccgttccttaatgtagacacctattgccttttacatatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaatt 244  Q
    |||| ||||||||||| || | |||| ||||| || ||||||||||||| |||   | ||||||||||||||||||||| ||| |||||||||| |||||    
T  5895699 ccgtcccttaatgtaggcatccattgtctttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctgttttgtgtattaatattacgaaatt 5895798  T
Q  245 atcatttgtttgtatatgtattaaattttacttttcat 282  Q
     || ||| ||| ||| |||||||||||| |||||||||    
T  5895799 gtcctttatttttatgtgtattaaatttaacttttcat 5895836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 9428195 - 9428272
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||| ||| |||| ||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||    
T  9428195 taattaatgtatctattttgtgtgttaatattatcaaattatcatttgtttgtatgtatattgaattttacttttcat 9428272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 22410945 - 22410845
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   ||||||||||||||||||||||| | |||||||||||||||||| || ||| ||||||| |||||||||||| || ||||    
T  22410945 atttcttaagaaaagttgttagtgtaattaatgtgtctgttttttatgttaatattaccaaattgtcttttatttgtatgtgtattaaatttgacctttc 22410846  T
Q  281 a 281  Q
    |    
T  22410845 a 22410845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 31945994 - 31945917
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||||||||||| |||| |||||||||||||||||||| || ||||||| ||| |||||||||||| |||||    
T  31945994 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcgtttgtttatatgtgtattaaatttgacttt 31945917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 3729414 - 3729484
Alignment:
Q  202 gtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||||||| |||| |||||||||||||||||||| |  ||||||||||| ||||||||||||    
T  3729414 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgtttgtatgtgtattaaattt 3729484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 31536016 - 31536117
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||||||||| |||   |||||||||||| | ||| |||||| ||||||||||| ||||||||| ||||||| ||| |||||||||||| |||||||    
T  31536016 atttcttaagaaaagttgttagtgtaattaatatatctattttatttgttaatattatcaaattatcttttgtttatatgtgtattaaatttgacttttc 31536115  T
Q  281 at 282  Q
    ||    
T  31536116 at 31536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 10669356 - 10669275
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||| ||||||||||||| |||| |||||||||||||||||||| |  |||| |||||| |||||||||||| |||||||||    
T  10669356 agtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgattgtatctgtattaaatttgacttttcat 10669275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 31153066 - 31152989
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||| |||||| ||| |||||||| ||||| | |||||||||||| |||||||||||| |||||||||    
T  31153066 taattaatgtgtctattttatatgtcaatattactaaattgttatttgtttgtatgtgtattaaatttgacttttcat 31152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 197553 - 197462
Alignment:
Q  183 atttcttaagaaatgtt--cagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||||||| |||  |||| |||||||||||| |||||| ||||| |||||||  ||||| |||||||||||||| ||||||||||||    
T  197553 atttcttaagaaaagttatcagtataattaatgtgtttgttttgtgtgtcaatattattaaattgtcatttgtttgtatgtgtattaaattt 197462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 33607384 - 33607460
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||| |||  ||||||||||||| ||||||||| ||||||||||| ||| |||||||| |||||||||    
T  33607384 aattaatgtgtctatttagtgtgttaatattatcaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 33607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 6791404 - 6791478
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||||  ||||| |||||||||||||  ||||| |||||||||||||| |||||||||||| ||||||    
T  6791404 tgtaattaatgtgt--gttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtattaaatttgactttt 6791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 12514832 - 12514768
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaat 270  Q
    ||||||||||||  |||| | ||||||||||||||||||||||||||||| ||| ||||||||||    
T  12514832 aattaatgtgtccattttgtatgttaatattaccaaattatcatttgtttatatgtgtattaaat 12514768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 1514337 - 1514233
Alignment:
Q  175 ttttacatatttcttaagaaa--tgttcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    |||| ||||||| ||||||||  |||| |||| ||||||| ||| | |||| | |||||||||||||||||||||| |||||| ||| ||||||||||||    
T  1514337 tttttcatattttttaagaaagttgtt-agtgcaattaatatgtttattttgtatgttaatattaccaaattatcaattgtttatatgtgtattaaattt 1514239  T
Q  273 tacttt 278  Q
     |||||    
T  1514238 gacttt 1514233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 28238392 - 28238318
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||| |||| |||||||||||||||| ||||||  |||||| ||| | |||||||||| ||||||    
T  28238392 taattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttgactttt 28238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 30248593 - 30248647
Alignment:
Q  207 attaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatat 261  Q
    |||||||||| |||||| ||||||||||||||||||||  |||||||||||||||    
T  30248593 attaatgtgtttgttttgtgtgttaatattaccaaattggcatttgtttgtatat 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 20522974 - 20523077
Alignment:
Q  181 atatttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttt 278  Q
    |||||||||||||||||||   |||| |||||||| || |  ||| ||||| ||||||||||||||||   |||||||||| |||||||||||| | |||    
T  20522974 atatttcttaagaaatgttgttagtgcaattaatgagtttagtttgtgtgtcaatattaccaaattatttcttgtttgtatgtgtattaaatttgatttt 20523073  T
Q  279 tcat 282  Q
    ||||    
T  20523074 tcat 20523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 4250742 - 4250703
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattac 238  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  4250742 tcagtgtaattaatgtgtctgttttgtgtgttaatattac 4250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 5457216 - 5457282
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattt 272  Q
    ||||||||| ||||||||||  |||||||||| |||||| |  |||||||||| |||||||||||||    
T  5457216 aattaatgtatctgttttatacgttaatattatcaaattgttctttgtttgtaaatgtattaaattt 5457282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 16186597 - 16186675
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||||||||||||||||| | ||||||| |||| ||||| ||  |||||||  |||||||||||||| |||||||||    
T  16186597 agtgtaattaatgtgtctgttttgtatgttaat-ttacgaaattgtcccttgtttg--tatgtattaaatttgacttttcat 16186675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 31780153 - 31780226
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| |||| | |||| ||||||| ||||| || ||||||||| | |||||||||||| ||||||    
T  31780153 aattaatgtgtctattttgtatgttgatattactaaattgtcctttgtttgtttgtgtattaaatttcactttt 31780226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 5084615 - 5084555
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtat 265  Q
    |||| ||||||| |||||| ||||||||||||| |||||| || ||||||||||| |||||    
T  5084615 taataaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtat 5084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 1994 - 1913
Alignment:
Q  201 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  1994 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgacttttcat 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 214622 - 214720
Alignment:
Q  183 atttcttaagaaatgttc--agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    ||||||||||||| |||   ||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  214622 atttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 214720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 22082 - 22165
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||||||||||||| |||||| ||| |||||||||||| ||| || ||||||||||| | |||||||||| |||||||||    
T  22082 tcagtgtaattaatgtgtttgttttgtgtattaatattaccatattgtcctttgtttgtatgtatattaaatttaacttttcat 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 18718 - 18792
Alignment:
Q  206 aattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttc 280  Q
    ||||||| ||| | |||| || ||||||||||||||||| |||||||||| ||| ||| |||||||| |||||||    
T  18718 aattaatttgtttattttgtgggttaatattaccaaattgtcatttgtttctatgtgttttaaatttgacttttc 18792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 99888 - 99817
Alignment:
Q  211 atgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    |||||||| |||| |||||||||||||| ||||| || |||||||| || |||||||||||| |||||||||    
T  99888 atgtgtctattttgtgtgttaatattacgaaattgtcttttgtttgaatgtgtattaaatttgacttttcat 99817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 38554 - 38480
Alignment:
Q  205 taattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||||||| |||| |||||||||||||||| ||||||  |||||| ||| | |||||||||| ||||||    
T  38554 taattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttgactttt 38480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 61361 - 61282
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttacttttcat 282  Q
    ||||||||| |||| |||||| |||||||||||||  ||||| || ||| ||| ||| |||||||||||| |||||||||    
T  61361 tgtaattaacgtgtttgttttgtgtgttaatattattaaattgtcctttatttatatgtgtattaaatttaacttttcat 61282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 49162 - 49238
Alignment:
Q  203 tgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatatgtattaaattttactttt 279  Q
    |||||||||| |||||  ||| |||||||||||||  ||||| ||||||||||| || | |||||||||| ||||||    
T  49162 tgtaattaatatgtctactttgtgtgttaatattattaaattgtcatttgtttgcatgtttattaaatttgactttt 49238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 19554 - 19614
Alignment:
Q  199 tcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcatttgtttgtatat 261  Q
    |||||| ||||||| ||||| ||||  ||| |||||||||||||||||| |||||||||||||    
T  19554 tcagtgcaattaatatgtctatttt--gtgctaatattaccaaattatcctttgtttgtatat 19614  T

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