View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14944_low_35 (Length: 247)

Name: NF14944_low_35
Description: NF14944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14944_low_35
NF14944_low_35
[»] scaffold0051 (1 HSPs)
scaffold0051 (128-215)||(62062-62149)
[»] chr6 (11 HSPs)
chr6 (128-215)||(4107954-4108041)
chr6 (128-215)||(28573828-28573915)
chr6 (128-215)||(6969295-6969382)
chr6 (126-208)||(34316948-34317031)
chr6 (139-215)||(9981259-9981335)
chr6 (128-215)||(15045546-15045633)
chr6 (128-215)||(25529241-25529328)
chr6 (128-202)||(1218518-1218592)
chr6 (128-202)||(24443927-24444001)
chr6 (150-198)||(4897511-4897559)
chr6 (128-202)||(18323835-18323909)
[»] chr4 (24 HSPs)
chr4 (128-215)||(12682755-12682842)
chr4 (133-215)||(46104184-46104266)
chr4 (128-215)||(2116089-2116176)
chr4 (140-198)||(35833430-35833488)
chr4 (128-215)||(3821198-3821285)
chr4 (148-215)||(5752471-5752538)
chr4 (132-215)||(15704115-15704198)
chr4 (128-215)||(35498532-35498619)
chr4 (128-215)||(39716717-39716804)
chr4 (130-215)||(13171627-13171712)
chr4 (128-215)||(3757726-3757813)
chr4 (128-215)||(50119957-50120044)
chr4 (144-198)||(8956932-8956986)
chr4 (144-198)||(8986904-8986958)
chr4 (144-198)||(37349802-37349856)
chr4 (128-198)||(51347488-51347558)
chr4 (124-181)||(47560252-47560309)
chr4 (128-195)||(24948306-24948373)
chr4 (144-198)||(9888906-9888960)
chr4 (158-215)||(17730463-17730520)
chr4 (158-215)||(30529278-30529335)
chr4 (150-198)||(24547353-24547401)
chr4 (150-198)||(29712392-29712440)
chr4 (150-202)||(52799047-52799099)
[»] chr3 (14 HSPs)
chr3 (128-215)||(26777850-26777937)
chr3 (128-212)||(4139350-4139434)
chr3 (133-215)||(53800504-53800586)
chr3 (128-215)||(8393563-8393650)
chr3 (127-215)||(19895645-19895733)
chr3 (148-215)||(18682509-18682576)
chr3 (150-215)||(22519211-22519276)
chr3 (128-173)||(39838225-39838270)
chr3 (128-192)||(11602187-11602251)
chr3 (150-215)||(19368941-19369006)
chr3 (130-215)||(28981817-28981902)
chr3 (128-215)||(29530561-29530648)
chr3 (150-198)||(26102167-26102215)
chr3 (150-198)||(35855226-35855274)
[»] chr5 (16 HSPs)
chr5 (46-128)||(31786128-31786210)
chr5 (128-215)||(34727334-34727422)
chr5 (133-214)||(12422345-12422426)
chr5 (128-215)||(3088031-3088118)
chr5 (127-215)||(33709813-33709901)
chr5 (128-215)||(25698717-25698804)
chr5 (128-215)||(30140502-30140589)
chr5 (144-198)||(6305466-6305520)
chr5 (128-198)||(36886985-36887055)
chr5 (128-202)||(41689275-41689349)
chr5 (126-198)||(42977849-42977918)
chr5 (144-198)||(43138563-43138617)
chr5 (150-215)||(30754431-30754496)
chr5 (144-198)||(754461-754515)
chr5 (128-198)||(17643402-17643472)
chr5 (164-202)||(34715632-34715670)
[»] chr7 (19 HSPs)
chr7 (128-215)||(49146122-49146210)
chr7 (128-215)||(4848348-4848436)
chr7 (128-215)||(688063-688150)
chr7 (128-198)||(46197416-46197487)
chr7 (126-215)||(39651148-39651237)
chr7 (150-215)||(11840447-11840512)
chr7 (150-215)||(21600970-21601035)
chr7 (128-215)||(9143473-9143563)
chr7 (128-215)||(39276613-39276700)
chr7 (126-198)||(29467749-29467821)
chr7 (133-215)||(29684113-29684195)
chr7 (150-202)||(17169046-17169098)
chr7 (142-202)||(31899998-31900058)
chr7 (128-215)||(21670792-21670879)
chr7 (144-198)||(24684650-24684704)
chr7 (128-198)||(44804520-44804590)
chr7 (128-202)||(48529946-48530020)
chr7 (134-203)||(42912138-42912207)
chr7 (158-198)||(35157012-35157052)
[»] chr8 (18 HSPs)
chr8 (128-215)||(4466420-4466507)
chr8 (133-215)||(7389203-7389285)
chr8 (133-215)||(25616497-25616580)
chr8 (128-215)||(25620714-25620801)
chr8 (137-215)||(41972965-41973043)
chr8 (128-208)||(19243235-19243315)
chr8 (128-208)||(19316419-19316499)
chr8 (150-198)||(40587709-40587757)
chr8 (128-215)||(36776404-36776491)
chr8 (133-208)||(45298259-45298334)
chr8 (144-198)||(8760717-8760771)
chr8 (125-215)||(18378802-18378892)
chr8 (144-198)||(25836282-25836336)
chr8 (150-215)||(25346056-25346121)
chr8 (130-215)||(40616094-40616179)
chr8 (128-215)||(24053914-24054001)
chr8 (144-198)||(1942805-1942859)
chr8 (144-198)||(8162792-8162846)
[»] chr1 (18 HSPs)
chr1 (128-215)||(47134704-47134791)
chr1 (134-215)||(5426222-5426303)
chr1 (128-215)||(16300389-16300476)
chr1 (128-198)||(38894755-38894825)
chr1 (128-215)||(52306069-52306156)
chr1 (128-202)||(1367291-1367365)
chr1 (126-196)||(41918924-41918994)
chr1 (128-197)||(19322362-19322431)
chr1 (126-198)||(33075673-33075745)
chr1 (130-198)||(43116050-43116118)
chr1 (128-202)||(4890098-4890172)
chr1 (128-202)||(17364616-17364690)
chr1 (128-202)||(29188313-29188387)
chr1 (128-202)||(33359700-33359774)
chr1 (150-215)||(46626324-46626389)
chr1 (128-198)||(1826793-1826863)
chr1 (128-198)||(22198924-22198994)
chr1 (144-198)||(28570741-28570795)
[»] scaffold0759 (1 HSPs)
scaffold0759 (128-215)||(5891-5978)
[»] chr2 (14 HSPs)
chr2 (128-215)||(28607221-28607308)
chr2 (46-128)||(32308508-32308587)
chr2 (128-215)||(10050189-10050276)
chr2 (46-128)||(32800545-32800628)
chr2 (128-198)||(32677200-32677270)
chr2 (129-202)||(9545788-9545861)
chr2 (150-202)||(2952779-2952831)
chr2 (128-215)||(24520866-24520953)
chr2 (134-215)||(19486111-19486192)
chr2 (150-215)||(19486211-19486276)
chr2 (150-198)||(17836989-17837037)
chr2 (132-212)||(18096495-18096575)
chr2 (128-202)||(4292795-4292869)
chr2 (128-215)||(10876571-10876656)
[»] scaffold0009 (1 HSPs)
scaffold0009 (128-212)||(225435-225519)
[»] scaffold0057 (1 HSPs)
scaffold0057 (128-202)||(20592-20666)
[»] scaffold0429 (1 HSPs)
scaffold0429 (128-208)||(12961-13040)
[»] scaffold0381 (1 HSPs)
scaffold0381 (144-198)||(9585-9639)
[»] scaffold0045 (1 HSPs)
scaffold0045 (130-180)||(18903-18953)
[»] scaffold0385 (1 HSPs)
scaffold0385 (150-198)||(8317-8365)


Alignment Details
Target: scaffold0051 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 62062 - 62149
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  62062 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattggttgag 62149  T

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Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 4107954 - 4108041
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  4107954 tctatatactaatataaaagttaatgtccattgattttaccatttttcccctatgaggggcaatttggtaaattacaaattggttgag 4108041  T

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Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 28573915 - 28573828
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  28573915 tctatatactgatataaaagttaatatcctttgattttaccattttgcccctaggaggggcaatttggtaaattacaaattggttgag 28573828  T

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Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 6969382 - 6969295
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  6969382 tctatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattacaaaattgttgag 6969295  T

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Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 34316948 - 34317031
Alignment:
Q  126 cttctatat-actaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaatt 208  Q
    ||||||||| ||||||||||||  | |||||||||||||||||| ||||||||||| ||| ||||||||||||| |||| ||||    
T  34316948 cttctatattactaatataaaaagtgatgtccattgattttacctttttgcccctaagaggggcaatttggtaatttactaatt 34317031  T

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Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 9981335 - 9981259
Alignment:
Q  139 atataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||  ||||| |||||| ||||||||||| ||||||| || |||||||||||||||| | |||||||||||    
T  9981335 atataaaaggaaatgttcattgaatttaccattttacccctataaggggcaatttggtaaattgctaattggttgag 9981259  T

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Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 15045633 - 15045546
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  || |||||||||||||||||||| ||||||    
T  15045633 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaattacaaatttgttgag 15045546  T

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Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 25529241 - 25529328
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||| |  |||||| ||| |||||| ||||||| ||||| || |||||||||||||  ||| |||||||||||    
T  25529241 tctatatactaatataaaaatccatgtccgttgcttttacgattttgctcctataaggggcaatttggtaatctactaattggttgag 25529328  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 1218518 - 1218592
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  |||||||||||||||||    
T  1218518 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 1218592  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 24443927 - 24444001
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||| ||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  24443927 tctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 24444001  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 4897559 - 4897511
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  4897559 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 4897511  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 18323835 - 18323909
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |   ||||||||||||||||    
T  18323835 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaaaagcaatttggtaaatta 18323909  T

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Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 12682842 - 12682755
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  12682842 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattataaattggttgag 12682755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 46104184 - 46104266
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  46104184 atactaatataaaagttaatgtccattgattttaccattttgccccaatgaggggcaatttggtaaattacaaattggttgag 46104266  T

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Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 2116089 - 2116176
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||||| ||||||||||||    
T  2116089 tctatatactaatataaaagttaatgtccattgattttaccattttgtccttaggaggggcaatttggtaaattataaattggttgag 2116176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 35833488 - 35833430
Alignment:
Q  140 tataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35833488 tataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 35833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 3821285 - 3821198
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||  |||||||| |||| ||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  3821285 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 3821198  T

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Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 5752471 - 5752538
Alignment:
Q  148 ttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  5752471 ttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattacaaaattgttgag 5752538  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 15704115 - 15704198
Alignment:
Q  132 tatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||| ||||||||  |||||| | || | ||||||||||||||||||| || || ||||||||||||||| |||||||||||    
T  15704115 tatacttatataaaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaattactaattggttgag 15704198  T

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Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 35498619 - 35498532
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||   |||| || |||| |||| |||||||||||||| |  | |||||||||||||||| |||||||||||    
T  35498619 tctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattggttgag 35498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 39716804 - 39716717
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||||||   ||||||||||    
T  39716804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 39716717  T

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Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 13171627 - 13171712
Alignment:
Q  130 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||  ||| | ||||||| |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 13171712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 3757726 - 3757813
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||  |||   ||||| |||||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  3757726 tctatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 3757813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 50120044 - 50119957
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||  |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  50120044 tctatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 50119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 8956932 - 8956986
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  8956932 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8956986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 8986904 - 8986958
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  8986904 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8986958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 37349802 - 37349856
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  37349802 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 37349856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 51347488 - 51347558
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||  |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  51347488 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 51347558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 47560309 - 47560252
Alignment:
Q  124 ttcttctatatactaatataaaagttaatgtccattgattttaccattttgcccctat 181  Q
    |||||||||||||| |||| |||  |||||||| |||| |||||||||||||||||||    
T  47560309 ttcttctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctat 47560252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 24948373 - 24948306
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttgg 195  Q
    |||||||||| ||||||||   ||||||| |||| ||||||||||||| ||||| || ||||||||||    
T  24948373 tctatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttgg 24948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 9888960 - 9888906
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || | |||||||||||    
T  9888960 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 9888906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 17730463 - 17730520
Alignment:
Q  158 ttgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||| ||||||||||||| ||||| || |||||||||||||  ||| |||||||||||    
T  17730463 ttgaatttaccattttgctcctataaggggcaatttggtaatctactaattggttgag 17730520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 30529335 - 30529278
Alignment:
Q  158 ttgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  30529335 ttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 24547353 - 24547401
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||| |||| |||||||||||| |||||| || |||||||||||||    
T  24547353 aatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 24547401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 29712392 - 29712440
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||| || | ||||||||||||||||||| || |||||||||||||    
T  29712392 aatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 29712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 52799047 - 52799099
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    ||||||| || | ||||||||||| ||||||| || |||||||||||||||||    
T  52799047 aatgtcctttaaatttaccattttacccctattaggggcaatttggtaaatta 52799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 26777937 - 26777850
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26777937 tctatatactaatataaaagttaacgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattggttgag 26777850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 4139434 - 4139350
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  4139434 tctatatactaatataaaagttaatgtccattgattttaccattttgtccctattaggggcaatttggtaaattacaaattggtt 4139350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 53800504 - 53800586
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  53800504 atactaatataaaagttaatgtccattgattttaccattttgcccttaggaggggcaatttggtaaattacaaattggttgag 53800586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 8393563 - 8393650
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  8393563 tctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaattacaaaattgttgag 8393650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 19895733 - 19895645
Alignment:
Q  127 ttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||| ||||| |||  |||||||||||| ||||||||||||||| ||| |  |||||||||||||||||  |||||||||||    
T  19895733 ttctatatacttatatagaagaaaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaattagtaattggttgag 19895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 18682509 - 18682576
Alignment:
Q  148 ttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  18682509 ttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattacaaaattgttgag 18682576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 22519211 - 22519276
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||| ||||||||||||||||||| || |||||||| ||||||||  |||||||||||    
T  22519211 aatgtccattgaatttaccattttgcccctataaggggcaatttagtaaattattaattggttgag 22519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 39838270 - 39838225
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccatttt 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39838270 tctatatactaatataaaagttaatgtccgttgattttaccatttt 39838225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 11602251 - 11602187
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatt 192  Q
    ||||||||||||||||||| |  |||||| |||||||||||||||||||||||| || |||||||    
T  11602251 tctatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaatt 11602187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 19369006 - 19368941
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||| |||||||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  19369006 aatgtcccttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19368941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 28981902 - 28981817
Alignment:
Q  130 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||  ||| |  |||||| |||| ||||||||||||||||||| || |||||||||||||   || |||||||||||    
T  28981902 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatcaactaattggttgag 28981817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 29530648 - 29530561
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||  |||   ||||||| |||| |||||||||||| |||||| || |||||||||||||  |||  ||||||||||    
T  29530648 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 29530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 26102215 - 26102167
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||| |||| ||||||||||||||||||| || || ||||||||||    
T  26102215 aatgtcctttgaatttaccattttgcccctataagaggtaatttggtaa 26102167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 35855226 - 35855274
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||| || | ||||||||||||||||||| || |||||||||||||    
T  35855226 aatgtcccttaaatttaccattttgcccctataaggggcaatttggtaa 35855274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 31786210 - 31786128
Alignment:
Q  46 aaaataaataaacccataaaatctatcaacaacttcatcatttttatcacttttttaacaagtatcattttcatcctgttctt 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31786210 aaaataaataaacccataaaatctatcaacaacttcatcatttttatcacttttttaacaagcatcattttcatcctgttctt 31786128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 34727422 - 34727334
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattac-aaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||  || ||||||||| |||||||| ||||||||||||    
T  34727422 tctatatactaatataaaagttaatgtccattgattttaccattttgtctttagaagaggcaatttgataaattacaaaattggttgag 34727334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 12422426 - 12422345
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttga 214  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||| || |||||||||||||  ||| ||||||||||    
T  12422426 atactaatataaaaattcatgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattggttga 12422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 3088118 - 3088031
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||  |||||||| |||| ||||||||||||||||||| || |||||||||||||||||  |||||||||||    
T  3088118 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 3088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 33709901 - 33709813
Alignment:
Q  127 ttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||| |||| ||| ||||||||| |||| ||||||||||| ||||||| |  |||||||||||||||||  |||||||||||    
T  33709901 ttctatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaaattagtaattggttgag 33709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 25698804 - 25698717
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||||||   ||||||||||    
T  25698804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 25698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 30140502 - 30140589
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  || ||||||||||||||| |||||||||||    
T  30140502 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattggttgag 30140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 6305520 - 6305466
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  6305520 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 6305466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 36887055 - 36886985
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||  |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  36887055 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 36886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 41689275 - 41689349
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  |||||||||||||||||    
T  41689275 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaatta 41689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 42977918 - 42977849
Alignment:
Q  126 cttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||| ||||||| |||||||||  |||||||||||   |||||||||||||||||| || |||||||||||||    
T  42977918 cttcaatatacttatataaaagaaaatgtccattg---ttaccattttgcccctataaggggcaatttggtaa 42977849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 43138617 - 43138563
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  43138617 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 43138563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 30754431 - 30754496
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  30754431 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 754515 - 754461
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || | |||||||||||    
T  754515 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 754461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 17643472 - 17643402
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||  ||| | ||||||| |||| |||| |||||||||| ||| || |||||||||||||    
T  17643472 tctatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaa 17643402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 34715632 - 34715670
Alignment:
Q  164 ttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||||||||||| || |||||||||||||||||    
T  34715632 ttaccattttgcccctattaggggcaatttggtaaatta 34715670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 49146210 - 49146122
Alignment:
Q  128 tctatatactaatataaaa-gttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49146210 tctatatactaatataaaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattacaaattggttgag 49146122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 4848348 - 4848436
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattac-aaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  4848348 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggtaatttggtaaattacaaaattggttgag 4848436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 688063 - 688150
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  688063 tctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaaattacaaaattgttgag 688150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 46197416 - 46197487
Alignment:
Q  128 tctatatactaa-tataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  46197416 tctatatactaaatataaaagttaatgtccattgattttaccattttgcccttaggagaggcaatttggtaa 46197487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 39651237 - 39651148
Alignment:
Q  126 cttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  39651237 cttctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattggttgag 39651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 11840512 - 11840447
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||  |||||||||||    
T  11840512 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 11840447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 21601035 - 21600970
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||  |||||||||||    
T  21601035 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 21600970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 9143473 - 9143563
Alignment:
Q  128 tctatatactaatataaaagt---taatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||     |||| ||| |||| ||||||||||||||||||| || |||||||||||||||||| |||| ||||||    
T  9143473 tctatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaatttgttgag 9143563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 39276613 - 39276700
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  || |||||||||||||||||||| ||||||    
T  39276613 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaaattacaaatttgttgag 39276700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 29467749 - 29467821
Alignment:
Q  126 cttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  29467749 cttctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 29467821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 29684195 - 29684113
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||   ||||| | |||| ||||||||||| ||||||| || |||||||||||||  ||| |||||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattggttgag 29684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 17169046 - 17169098
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    ||||||| |||| ||||||||||||||||||| |  |||||||||||||||||    
T  17169046 aatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 17169098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 31900058 - 31899998
Alignment:
Q  142 taaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||| |||||||| |||| ||||| ||||||||||||| || |||||||||||| ||||    
T  31900058 taaaaggtaatgtcctttgaatttacaattttgcccctattaggggcaatttggtagatta 31899998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 21670879 - 21670792
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||| ||||||||||||| |  |  |||||||||||||||||||| ||||||    
T  21670879 tctatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataaaggataatttggtaaattacaaatttgttgag 21670792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 24684704 - 24684650
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| |||||||||||||| |||| || |||||||||||||    
T  24684704 aaagttaatgtcccatgaatttaccattttgcctctataaggggcaatttggtaa 24684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 44804520 - 44804590
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||  |||   ||||||| |||| |||||||||||| |||||| || |||||||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaa 44804590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 48530020 - 48529946
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| ||||  ||||||||||||||||||  | |||||||||||||||||    
T  48530020 tctatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaatta 48529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 42912138 - 42912207
Alignment:
Q  134 tactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattac 203  Q
    ||||| |||||||  | |||||||||||||||||| |||||||| || ||| ||||||||| ||| ||||    
T  42912138 tactagtataaaaagtgatgtccattgattttacctttttgcccttaagaggggcaatttgctaatttac 42912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 35157052 - 35157012
Alignment:
Q  158 ttgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||| ||||||||||||||||||| || |||||||||||||    
T  35157052 ttgaatttaccattttgcccctataaggggcaatttggtaa 35157012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 4466507 - 4466420
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||    
T  4466507 tctatatactaatataaaagttaatgtccattgattttaccattttacccttaggaggggcaatttggtaaattacaaattggttgag 4466420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 7389203 - 7389285
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  7389203 atactaatataaaagttaatgtccattgattttaccattttgccccaaggaggggcaatttggtaaattacaaattggttgag 7389285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 25616580 - 25616497
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattac-aaattggttgag 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||||    
T  25616580 atactaatataaaagttaatgtccattgattttaccattttgcccttaagaggggcaatttggtaaattacaaaattggttgag 25616497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 25620801 - 25620714
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  25620801 tctatacactgatataaaagttcatgtccattgattttactattttgcccctatgaggggcaatttggtaaattacaaattagttgag 25620714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 41972965 - 41973043
Alignment:
Q  137 taatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| | ||||||| |||| ||||||||||||||||||| || |||||||||||||  ||| |||||||||||    
T  41972965 taatataaaattaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattggttgag 41973043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 19243235 - 19243315
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaatt 208  Q
    |||||||||||||||||||  | |||||  ||||||||||| |||||||||| | || ||||||||||||| |||| ||||    
T  19243235 tctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttactaatt 19243315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 19316419 - 19316499
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaatt 208  Q
    |||||||||||||||||||  | |||||  ||||||||||| |||||||||| | || ||||||||||||| |||| ||||    
T  19316419 tctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaatttactaatt 19316499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 40587757 - 40587709
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||    
T  40587757 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 40587709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 36776404 - 36776491
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||  |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  36776404 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 36776491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 45298334 - 45298259
Alignment:
Q  133 atactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaatt 208  Q
    ||||||||||||||  | |||| ||||||||||||| |||| |||||| ||| ||||||||||||| |||| ||||    
T  45298334 atactaatataaaaaatgatgtacattgattttacctttttacccctaagaggggcaatttggtaatttactaatt 45298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 8760717 - 8760771
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  8760717 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 18378892 - 18378802
Alignment:
Q  125 tcttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||| |||| |||   ||||||| |||| |||| ||||||||| |||| || |||||||||||||||||   ||||||||||    
T  18378892 tcttctatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattggttgag 18378802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 25836336 - 25836282
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  25836336 aaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 25836282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 25346056 - 25346121
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||| |||||||||||||| |||| || |||||||||||||  |||  ||||||||||    
T  25346056 aatgtccattgaatttaccattttgcctctataaggggcaatttggtaatctacttattggttgag 25346121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 40616179 - 40616094
Alignment:
Q  130 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||  ||| |  |||||| |||| ||||||||||||| ||||| || |||||||||||||  ||| |||||||||||    
T  40616179 tatatactaataagaaaatccatgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattggttgag 40616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 24053914 - 24054001
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| || |||||||||||||  |||  ||||||||||    
T  24053914 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctacttattggttgag 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 1942805 - 1942859
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| |||||||||||||| |||| || |||||||||||||    
T  1942805 aaagttaatgtcccatgaatttaccattttgcctctataaggggcaatttggtaa 1942859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 8162846 - 8162792
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || | |||||||||||    
T  8162846 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 8162792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 47134704 - 47134791
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  47134704 tctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 47134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 5426222 - 5426303
Alignment:
Q  134 tactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||    
T  5426222 tactaatataacagttaatgtccattgattttaccattttgcccttagaaggggcaatttggtaaattacaaattggttgag 5426303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 16300389 - 16300476
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| ||| ||||||||| |||| ||||||||||||| ||||| || |||||||||||||||||| |||||||||||    
T  16300389 tctatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattggttgag 16300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 38894755 - 38894825
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||||||||||| || |||||||||||||    
T  38894755 tctatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 38894825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 52306069 - 52306156
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| ||||||||   ||| ||| || | ||||||||||||||||||| || ||||||||| |||||||| |||||||||||    
T  52306069 tctatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaattactaattggttgag 52306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 1367291 - 1367365
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  1367291 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 1367365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 41918994 - 41918924
Alignment:
Q  126 cttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggt 196  Q
    ||||||||||||||||||||| |  ||||||||||| ||| | |||||||||||| ||| |||||||||||    
T  41918994 cttctatatactaatataaaaatatatgtccattgaatttccaattttgcccctaggagtggcaatttggt 41918924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 19322431 - 19322362
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggta 197  Q
    ||||||||||||||  ||| | ||||||| |||| ||||||||||||||||||| || ||||||||||||    
T  19322431 tctatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggta 19322362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 33075745 - 33075673
Alignment:
Q  126 cttctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  33075745 cttctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 33075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 43116050 - 43116118
Alignment:
Q  130 tatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||||||||||||| |  ||||||||||| ||| | |||||||||||| ||| |||||||||||||    
T  43116050 tatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaa 43116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 4890098 - 4890172
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| |||||||||||||| |||| || |||||||||||||||||    
T  4890098 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaatta 4890172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 17364690 - 17364616
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||| ||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  17364690 tctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 17364616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 29188387 - 29188313
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  |||||||||||||||||    
T  29188387 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 29188313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 33359700 - 33359774
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| |  |||||||||||||||||    
T  33359700 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaatta 33359774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 46626389 - 46626324
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  46626389 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 46626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 1826793 - 1826863
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||| |||| |||  |||||||| |||| |||||||||||| | |||| || |||||||||||||    
T  1826793 tctatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaa 1826863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 22198994 - 22198924
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||| |||| |||   ||||||| |||| |||| |||||||||||||| || |||||||||||||    
T  22198994 tctatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaa 22198924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 28570741 - 28570795
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || | |||||||||||    
T  28570741 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 28570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 5978 - 5891
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||||||| || ||||||||||||||||||||| | ||||||    
T  5978 tctatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaaattacaaaattgttgag 5891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 28607221 - 28607308
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| ||| | |||||||||||| |||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  28607221 tctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaaattacaaattggttgag 28607308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 32308587 - 32308508
Alignment:
Q  46 aaaataaataaacccataaaatctatcaacaacttcatcatttttatcacttttttaacaagtatcattttcatcctgttctt 128  Q
    |||||||| ||||||||||||||||   ||| ||||||| |||||||||||||| ||||||| |||||||||||| |||||||    
T  32308587 aaaataaagaaacccataaaatcta---acatcttcatcctttttatcacttttctaacaagcatcattttcatcatgttctt 32308508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 10050276 - 10050189
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || ||||||||| |||||||| |||||||||||    
T  10050276 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaattactaattggttgag 10050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 32800545 - 32800628
Alignment:
Q  46 aaaataaataaacccataaaatctatcaacaacttcatcatttttatcacttt-tttaacaagtatcattttcatcctgttctt 128  Q
    |||||||||||||||||||||||||| |||| |||||| ||||| ||||||||   | ||||| |||||||||||| |||||||    
T  32800545 aaaataaataaacccataaaatctatgaacatcttcattattttcatcactttgaatgacaagcatcattttcatcatgttctt 32800628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 32677270 - 32677200
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||| |||| ||| | ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  32677270 tctatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 32677200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 9545861 - 9545788
Alignment:
Q  129 ctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    ||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  9545861 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 9545788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 2952779 - 2952831
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  2952779 aatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 2952831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 24520866 - 24520953
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||||||||| ||||||||   ||||||| |||| ||||  |||||||| |||| ||  ||||||||||||||||| |||||||||||    
T  24520866 tctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattggttgag 24520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 19486192 - 19486111
Alignment:
Q  134 tactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    |||| |||||||||  ||| |||||||| |||| |||||||||||||| || |||||||||||||  |||  ||||||||||    
T  19486192 tacttatataaaagaaaatatccattgaatttatcattttgcccctataaggggcaatttggtaatctacttattggttgag 19486111  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 19486211 - 19486276
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||  |||  ||||||||||    
T  19486211 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19486276  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 17836989 - 17837037
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    ||||||| |||| ||||||||||||||||||| || |||||||||||||    
T  17836989 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 17837037  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 18096495 - 18096575
Alignment:
Q  132 tatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggtt 212  Q
    |||||| ||||||||   ||||||| |||| ||||||||||||||||||| || || ||||||| ||||||  ||||||||    
T  18096495 tatacttatataaaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttggcaaattattaattggtt 18096575  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 4292869 - 4292795
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||| ||||| |  |||||||||||||||||    
T  4292869 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaatta 4292795  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 10876656 - 10876571
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggttgag 215  Q
    ||||||||||||||  |||   ||||||| |||| ||||||||||||||||||  || |||||||||||||  |||  ||||||||||    
T  10876656 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgccccta--aggggcaatttggtaatctacttattggttgag 10876571  T

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Target: scaffold0009 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 225435 - 225519
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaattggtt 212  Q
    |||||||||| |||| |||   |||||||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||    
T  225435 tctatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggtt 225519  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 20666 - 20592
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaatta 202  Q
    |||||||||| |||| |||   ||||||| |||| ||||||||||||||||||| || |||||||||||||||||    
T  20666 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaatta 20592  T

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Target: scaffold0429 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 12961 - 13040
Alignment:
Q  128 tctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaaattacaaatt 208  Q
    |||||||||||||||| ||  | ||||| |||||||||||| ||||||||||| ||| ||||||||||||| |||| ||||    
T  12961 tctatatactaatatagaaagtgatgtcaattgattttacc-ttttgcccctaagaggggcaatttggtaatttactaatt 13040  T

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Target: scaffold0381 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 9585 - 9639
Alignment:
Q  144 aaagttaatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||||||||  ||| ||||||||||||||||||| || | |||||||||||    
T  9585 aaagttaatgtcccatgaatttaccattttgcccctataagggtcaatttggtaa 9639  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 18953 - 18903
Alignment:
Q  130 tatatactaatataaaagttaatgtccattgattttaccattttgccccta 180  Q
    ||||||||| ||||||| |  |||||||||||||||| |||||||||||||    
T  18953 tatatactattataaaaatacatgtccattgattttatcattttgccccta 18903  T

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Target: scaffold0385 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 8365 - 8317
Alignment:
Q  150 aatgtccattgattttaccattttgcccctatgagcggcaatttggtaa 198  Q
    |||||||  ||| ||||||||||||||||||| || |||||||||||||    
T  8365 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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