View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14944_low_43 (Length: 207)
Name: NF14944_low_43
Description: NF14944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14944_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 94; Significance: 4e-46; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 34723256 - 34723163
Alignment:
| Q |
100 |
ataaagtaataataaatgaacaagtttaaccgttaagaatctcactgtactctactatcaaataaccattacaactggaagtgctgtgtttggt |
193 |
Q |
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| T |
34723256 |
ataaagtaataataaatgaacaagtttaaccgttaagaatctcactgtactctactatcaaataaccattacaactggaagtgctgtgtttggt |
34723163 |
T |
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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 34723355 - 34723321
Alignment:
| Q |
1 |
ccattgcctcactctacacactttcattccagtac |
35 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
34723355 |
ccattgcctcactctacacactttcattccagtac |
34723321 |
T |
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