View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14945_high_6 (Length: 373)

Name: NF14945_high_6
Description: NF14945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14945_high_6
NF14945_high_6
[»] chr8 (33 HSPs)
chr8 (87-354)||(15849793-15850059)
chr8 (9-90)||(15848076-15848154)
chr8 (26-87)||(21303984-21304044)
chr8 (26-86)||(31846469-31846528)
chr8 (25-88)||(8437917-8437979)
chr8 (26-89)||(34923861-34923922)
chr8 (31-86)||(40791756-40791810)
chr8 (17-58)||(17564717-17564757)
chr8 (17-86)||(40791068-40791135)
chr8 (17-57)||(34925393-34925432)
chr8 (17-60)||(12336280-12336322)
chr8 (19-86)||(14094140-14094205)
chr8 (17-59)||(8443313-8443354)
chr8 (26-60)||(13421488-13421522)
chr8 (26-88)||(30353864-30353925)
chr8 (17-86)||(36016748-36016814)
chr8 (17-58)||(253572-253612)
chr8 (17-58)||(662246-662286)
chr8 (17-58)||(848044-848084)
chr8 (33-86)||(3075328-3075380)
chr8 (17-58)||(31740137-31740177)
chr8 (17-58)||(37266130-37266170)
chr8 (17-58)||(37872855-37872895)
chr8 (31-88)||(41312381-41312437)
chr8 (25-86)||(43764100-43764160)
chr8 (31-60)||(44746840-44746869)
chr8 (26-86)||(8442678-8442737)
chr8 (26-58)||(11140143-11140175)
chr8 (26-86)||(14880184-14880243)
chr8 (34-86)||(17565342-17565393)
chr8 (26-86)||(22934311-22934370)
chr8 (26-86)||(25485422-25485481)
chr8 (26-58)||(31739558-31739590)
[»] chr3 (32 HSPs)
chr3 (21-91)||(1364042-1364111)
chr3 (20-86)||(23682013-23682077)
chr3 (20-86)||(24054250-24054314)
chr3 (19-89)||(47794640-47794709)
chr3 (19-78)||(41587300-41587357)
chr3 (28-86)||(2756604-2756661)
chr3 (20-86)||(18364652-18364716)
chr3 (17-58)||(17764949-17764989)
chr3 (17-58)||(19066269-19066309)
chr3 (17-86)||(54403581-54403648)
chr3 (26-86)||(18365276-18365335)
chr3 (17-57)||(53490718-53490757)
chr3 (19-58)||(291158-291196)
chr3 (19-58)||(3090407-3090445)
chr3 (26-89)||(4558051-4558113)
chr3 (31-86)||(11345359-11345413)
chr3 (26-89)||(11581855-11581917)
chr3 (21-83)||(54605787-54605847)
chr3 (26-60)||(54606419-54606453)
chr3 (17-86)||(1262419-1262486)
chr3 (36-89)||(25480546-25480598)
chr3 (9-78)||(32222069-32222136)
chr3 (17-58)||(40036383-40036423)
chr3 (17-86)||(44500030-44500097)
chr3 (21-86)||(49765120-49765183)
chr3 (26-58)||(3089799-3089831)
chr3 (26-58)||(5963106-5963138)
chr3 (26-86)||(10887732-10887791)
chr3 (26-86)||(37183100-37183159)
chr3 (26-58)||(40927542-40927574)
chr3 (26-58)||(49080604-49080636)
chr3 (26-86)||(53490071-53490129)
[»] chr2 (30 HSPs)
chr2 (28-86)||(4437976-4438033)
chr2 (17-86)||(37009647-37009714)
chr2 (17-86)||(37199587-37199654)
chr2 (17-58)||(6229872-6229912)
chr2 (17-86)||(34173701-34173768)
chr2 (26-86)||(17829070-17829129)
chr2 (19-58)||(33146081-33146119)
chr2 (20-59)||(37329745-37329783)
chr2 (28-58)||(3044974-3045004)
chr2 (26-88)||(10357116-10357177)
chr2 (36-90)||(38910690-38910743)
chr2 (17-58)||(3515460-3515500)
chr2 (17-58)||(11564456-11564496)
chr2 (36-89)||(11942943-11942995)
chr2 (35-88)||(13873990-13874042)
chr2 (35-88)||(14014115-14014167)
chr2 (17-86)||(28167559-28167626)
chr2 (17-58)||(31597271-31597311)
chr2 (17-58)||(31709113-31709153)
chr2 (17-58)||(40769357-40769397)
chr2 (26-58)||(4437358-4437390)
chr2 (26-58)||(5474670-5474702)
chr2 (26-58)||(15006476-15006508)
chr2 (26-86)||(20894276-20894335)
chr2 (26-58)||(33146698-33146730)
chr2 (26-58)||(34173092-34173124)
chr2 (26-58)||(35175668-35175700)
chr2 (26-58)||(37198970-37199002)
chr2 (26-58)||(41521663-41521695)
chr2 (20-60)||(43439789-43439828)
[»] chr7 (30 HSPs)
chr7 (17-86)||(40401539-40401606)
chr7 (26-86)||(32867898-32867957)
chr7 (17-72)||(16425997-16426050)
chr7 (17-58)||(20261569-20261609)
chr7 (17-86)||(31221443-31221510)
chr7 (26-86)||(14078376-14078435)
chr7 (26-86)||(14388404-14388463)
chr7 (20-60)||(28308661-28308700)
chr7 (17-57)||(48872059-48872098)
chr7 (26-89)||(25607607-25607669)
chr7 (36-86)||(2935766-2935815)
chr7 (26-60)||(33869238-33869272)
chr7 (17-58)||(3391804-3391844)
chr7 (17-86)||(11639916-11639983)
chr7 (17-58)||(12677146-12677186)
chr7 (17-86)||(27619621-27619688)
chr7 (32-89)||(36687313-36687369)
chr7 (36-89)||(36848503-36848555)
chr7 (17-86)||(38987772-38987839)
chr7 (26-86)||(25276-25335)
chr7 (26-86)||(317298-317357)
chr7 (32-60)||(14753878-14753906)
chr7 (26-86)||(19156071-19156130)
chr7 (26-86)||(20755470-20755529)
chr7 (26-58)||(27144228-27144260)
chr7 (32-88)||(27144842-27144897)
chr7 (26-58)||(34999232-34999264)
chr7 (17-89)||(36688847-36688917)
chr7 (26-58)||(36847879-36847911)
chr7 (26-58)||(48982534-48982566)
[»] chr1 (19 HSPs)
chr1 (17-86)||(16536391-16536458)
chr1 (26-89)||(8061042-8061104)
chr1 (17-86)||(45559752-45559819)
chr1 (17-57)||(17109352-17109391)
chr1 (20-88)||(18406547-18406613)
chr1 (20-90)||(31765351-31765417)
chr1 (26-86)||(45738666-45738725)
chr1 (29-60)||(46682719-46682750)
chr1 (13-84)||(50143406-50143475)
chr1 (28-86)||(28044498-28044555)
chr1 (26-88)||(29510474-29510535)
chr1 (20-86)||(45737324-45737388)
chr1 (17-58)||(27225722-27225762)
chr1 (17-86)||(36604746-36604813)
chr1 (25-58)||(45195233-45195266)
chr1 (26-86)||(19072354-19072413)
chr1 (26-86)||(19120244-19120303)
chr1 (26-86)||(41575193-41575252)
chr1 (17-57)||(42831189-42831228)
[»] chr5 (18 HSPs)
chr5 (26-86)||(35751536-35751595)
chr5 (17-86)||(27979251-27979318)
chr5 (20-89)||(36737439-36737506)
chr5 (34-90)||(9118851-9118906)
chr5 (26-86)||(19408559-19408618)
chr5 (26-86)||(20183380-20183439)
chr5 (31-86)||(15144432-15144486)
chr5 (26-84)||(20570150-20570207)
chr5 (17-58)||(8573336-8573376)
chr5 (17-58)||(14594116-14594156)
chr5 (17-58)||(20259991-20260031)
chr5 (17-86)||(36762134-36762201)
chr5 (34-86)||(1932025-1932076)
chr5 (26-58)||(4877370-4877402)
chr5 (26-86)||(9017667-9017726)
chr5 (26-86)||(21639038-21639097)
chr5 (34-90)||(27028644-27028699)
chr5 (26-58)||(36742577-36742609)
[»] chr4 (30 HSPs)
chr4 (26-86)||(37708795-37708854)
chr4 (26-88)||(17722768-17722829)
chr4 (31-89)||(45847768-45847825)
chr4 (17-86)||(754888-754955)
chr4 (17-58)||(13482230-13482270)
chr4 (17-86)||(35665972-35666039)
chr4 (17-86)||(55068863-55068930)
chr4 (26-86)||(755522-755581)
chr4 (26-86)||(26705665-26705724)
chr4 (26-86)||(35667279-35667338)
chr4 (31-86)||(16192316-16192370)
chr4 (31-86)||(41919909-41919963)
chr4 (20-86)||(23722042-23722106)
chr4 (32-86)||(35667758-35667811)
chr4 (20-78)||(37147767-37147823)
chr4 (17-75)||(51268537-51268593)
chr4 (17-78)||(721967-722026)
chr4 (17-58)||(7479334-7479374)
chr4 (17-58)||(25010045-25010085)
chr4 (17-58)||(35667369-35667409)
chr4 (19-60)||(36898089-36898129)
chr4 (17-58)||(51019698-51019738)
chr4 (26-86)||(721342-721401)
chr4 (26-86)||(796403-796462)
chr4 (20-84)||(4949956-4950018)
chr4 (26-86)||(8192986-8193045)
chr4 (26-58)||(16960252-16960284)
chr4 (34-78)||(16960878-16960921)
chr4 (18-90)||(30193159-30193229)
chr4 (33-89)||(33047232-33047287)
[»] scaffold0003 (4 HSPs)
scaffold0003 (17-72)||(14710-14763)
scaffold0003 (17-72)||(28856-28909)
scaffold0003 (17-86)||(421167-421234)
scaffold0003 (26-86)||(421925-421984)
[»] chr6 (25 HSPs)
chr6 (31-78)||(7448891-7448937)
chr6 (26-88)||(11794763-11794824)
chr6 (17-58)||(21802592-21802632)
chr6 (17-86)||(32114395-32114462)
chr6 (26-86)||(12026193-12026252)
chr6 (26-86)||(12693865-12693924)
chr6 (17-57)||(15499484-15499523)
chr6 (20-86)||(10702925-10702989)
chr6 (17-59)||(31282233-31282274)
chr6 (26-88)||(32522499-32522560)
chr6 (31-88)||(188434-188490)
chr6 (17-58)||(2522715-2522755)
chr6 (17-58)||(14306838-14306878)
chr6 (17-58)||(22342144-22342184)
chr6 (26-58)||(4100561-4100593)
chr6 (26-58)||(4125923-4125955)
chr6 (26-58)||(10702317-10702349)
chr6 (26-86)||(11522819-11522878)
chr6 (26-86)||(12033113-12033172)
chr6 (26-86)||(14313845-14313904)
chr6 (17-85)||(22342208-22342274)
chr6 (26-58)||(32113785-32113817)
chr6 (26-58)||(32130982-32131014)
chr6 (38-78)||(32521863-32521902)
chr6 (36-88)||(34794528-34794579)
[»] scaffold0189 (1 HSPs)
scaffold0189 (17-58)||(11336-11376)
[»] scaffold0068 (1 HSPs)
scaffold0068 (17-58)||(59307-59347)
[»] scaffold0340 (1 HSPs)
scaffold0340 (26-86)||(12855-12914)
[»] scaffold0695 (1 HSPs)
scaffold0695 (19-86)||(2243-2308)
[»] scaffold0001 (1 HSPs)
scaffold0001 (17-58)||(185172-185212)
[»] scaffold0368 (1 HSPs)
scaffold0368 (17-57)||(11245-11284)
[»] scaffold0289 (1 HSPs)
scaffold0289 (26-58)||(3455-3487)
[»] scaffold0201 (1 HSPs)
scaffold0201 (26-86)||(15324-15383)
[»] scaffold0105 (1 HSPs)
scaffold0105 (26-86)||(19642-19701)


Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-118; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 87 - 354
Target Start/End: Original strand, 15849793 - 15850059
Alignment:
Q  87 aagaatgaccagaaatcaagttgataacattactgctaaatgtgggagtgaacaaatgtaagctaataaggaagctctgagatgatgattctcaaacatg 186  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  15849793 aagaatgaccagaaatcaagttgatgacatt-ctgctaaaggtgggagtgaacaaatgttagctaataaggaagctctgggaggatgattctcaaacatg 15849891  T
Q  187 ctcagtcacatggacttggatgatctcagatggaatcttaagcgtcgtttgcttcctcatcttgatgaatctgccagagatctatatgtttgtgtctgat 286  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15849892 ctcagtcacatggacttagatgatctcagatggaatcttaagcgtcatttgcttcctcatcttgatgaatctgccagagatctatatgtttgtgtctgat 15849991  T
Q  287 actcctatagtgcttccgaagcttgataacatagttatctctgactctgaccccatacctaagaactc 354  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  15849992 actcctatagtgcttctgaagcttgataacatagttatctctgactctgacccaagacctcagaactc 15850059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 15848076 - 15848154
Alignment:
Q  9 gtagattatacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 90  Q
    ||| ||| |||||||||| ||||| | ||| ||||||||||||||||||| |   |||||||||||||||||||||||||||    
T  15848076 gtanattttacttttcaaaggaagagaagtatatattttaacataagagggg---aggagtataattcaatcatctttaaga 15848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 21304044 - 21303984
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttta 87  Q
    |||| |||| ||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  21304044 aggggagggaagtgtatattttaacataagagg-ggaaagaaatataattcaatcatcttta 21303984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 31846528 - 31846469
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||||||||||||| |||  | ||| ||||||||||||||||    
T  31846528 agggaaggggagtgtatattttaacataagagg-ggagggaagtgtaattcaatcatcttt 31846469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 8437979 - 8437917
Alignment:
Q  25 aagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    ||||| |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||||||    
T  8437979 aaggggaggggagtgtatattttaacataaga-gaggagtggagtgtaattcaaacatctttaa 8437917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 34923922 - 34923861
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||    
T  34923922 aggggaggggagtgtatattttaacataaga-gagg-agggagtataattcaagcatctttaag 34923861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 40791756 - 40791810
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  40791756 aggggagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 40791810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 17564757 - 17564717
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  17564757 tacttttcaaggga-ggggagtgtatattttaacataagagg 17564717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 40791135 - 40791068
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||   ||||||||||||| |||||||    
T  40791135 tacttttcaaggga-gggtagtgtatattttaacataagagg-ggaggagagtataattcaaacatcttt 40791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 34925393 - 34925432
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  34925393 tacttttcaaggga-ggggagtgtatattttaacataagag 34925432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 12336280 - 12336322
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggag 60  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
T  12336280 tacttttcaaggga-gggaagtgtatattttaacataagaggag 12336322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 14094140 - 14094205
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||| |||||||||| |||||||||||||||| |||  ||||| |||||||| |||||||    
T  14094140 cttttcaaggga-ggggagtgtaaattttaacataagagg-ggaggggagtgtaattcaagcatcttt 14094205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 8443313 - 8443354
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagga 59  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  8443313 tacttttcaagggaagga-agtgtatattttaacataagagga 8443354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 13421522 - 13421488
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggag 60  Q
    |||| ||||||||||||||||||||||||||||||    
T  13421522 aggggaggggagtgtatattttaacataagaggag 13421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 30353925 - 30353864
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||| |||| |||||||||||||||||||||||| ||| | ||| |||||||| |||||||||    
T  30353925 aggggagggaagtgtatattttaacataagagga-gaaggaagtgtaattcaagcatctttaa 30353864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 36016748 - 36016814
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||  ||| | |||||||| |||||||    
T  36016748 tacttttcaaggga--gggagtgtatattttaacataaga-gaggaggggattgtaattcaagcatcttt 36016814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 253612 - 253572
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  253612 tacttttcaaggga-gaggagtgtatattttaacataagagg 253572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 662246 - 662286
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  662246 tacttttcaaggga-gaggagtgtatattttaacataagagg 662286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 848044 - 848084
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  848044 tacttttcaaggga-gaggagtgtatattttaacataagagg 848084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 3075380 - 3075328
Alignment:
Q  33 gggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  3075380 gggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 3075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 31740137 - 31740177
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  31740137 tacttttcaaggga-ggggagtgtatattttaatataagagg 31740177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 37266130 - 37266170
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  37266130 tacttttcaaggga-gtggagtgtatattttaacataagagg 37266170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 37872855 - 37872895
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  37872855 tacttttcaagg-aaggggaatgtatattttaacataagagg 37872895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 41312381 - 41312437
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  41312381 aggggaatgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaa 41312437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 43764160 - 43764100
Alignment:
Q  25 aagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||| ||| |||||||||||||||||||||||| ||| || ||| |||||||| |||||||    
T  43764160 aaggggaggagagtgtatattttaacataagagg-ggagagaagtgtaattcaaacatcttt 43764100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 44746840 - 44746869
Alignment:
Q  31 aggggagtgtatattttaacataagaggag 60  Q
    ||||||||||||||||||||||||||||||    
T  44746840 aggggagtgtatattttaacataagaggag 44746869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 8442737 - 8442678
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||||| |||||||||||||||||||||| ||||  |||| |||||||| |||||||    
T  8442737 agggtaggggtgtgtatattttaacataagagg-ggaagagagtgtaattcaagcatcttt 8442678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 11140175 - 11140143
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  11140175 aggggaggggagtgtatattttaacataagagg 11140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 14880184 - 14880243
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  14880184 aggggagggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 14880243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 17565342 - 17565393
Alignment:
Q  34 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||||| ||| |||||| ||||| || |||||||    
T  17565342 ggagtgtatattttaacataagagg-ggagaggagtgtaattgaagcatcttt 17565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 22934370 - 22934311
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  22934370 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 22934311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 25485422 - 25485481
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  25485422 agggtaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaaacatcttt 25485481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 31739590 - 31739558
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  31739590 aggggaggggagtgtatattttaacataagagg 31739558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 1364042 - 1364111
Alignment:
Q  21 tttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaagaa 91  Q
    ||||||||| ||||||||||||||||||||||||||||| ||  ||||| |||||||| ||||||| ||||    
T  1364042 tttcaaggggaggggagtgtatattttaacataagagga-gatgggagtgtaattcaaacatctttgagaa 1364111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 23682077 - 23682013
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  23682077 ttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtataactcaagcatcttt 23682013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 24054314 - 24054250
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  24054314 ttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtataactcaagcatcttt 24054250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 47794640 - 47794709
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||| ||||||||||    
T  47794640 cttttcaagggagggggaatgtatattttaacataagagga-gaggggagtgtaattcaaacatctttaag 47794709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 41587300 - 41587357
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  41587300 cttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtgtaattcaa 41587357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 2756604 - 2756661
Alignment:
Q  28 ggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  2756604 ggaaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 2756661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 18364716 - 18364652
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  18364716 ttttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 18364652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 17764949 - 17764989
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  17764949 tacttttcaaggga-ggggagtgtatattttaacataagagg 17764989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 19066269 - 19066309
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  19066269 tacttttcaaggga-ggggagtgtatattttaacataagagg 19066309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 54403648 - 54403581
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  54403648 tacttttcaaggga-gggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 54403581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 18365276 - 18365335
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  18365276 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 18365335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 53490718 - 53490757
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  53490718 tacttttcaaggga-ggggagtgtatattttaacataagag 53490757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 291196 - 291158
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  291196 cttttcaaggga-ggggagtgtatattttaacataagagg 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 3090407 - 3090445
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  3090407 cttttcaaggga-ggggagtgtatattttaacataagagg 3090445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 4558113 - 4558051
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| ||||||||||    
T  4558113 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatctttaag 4558051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 11345359 - 11345413
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  11345359 aggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 11345413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 11581917 - 11581855
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||| |||||||||||||||||||||||||||| ||| || | | |||||||| ||||||||||    
T  11581917 aggggaggggagtgtatattttaacataagagg-ggagagaaatgtaattcaaacatctttaag 11581855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 54605847 - 54605787
Alignment:
Q  21 tttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatc 83  Q
    |||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| ||||    
T  54605847 tttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatc 54605787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 54606419 - 54606453
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggag 60  Q
    |||| ||||||||||||||||||||||||||||||    
T  54606419 aggggaggggagtgtatattttaacataagaggag 54606453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 1262486 - 1262419
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| || || |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  1262486 tacttttcaagaga-ggagagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 1262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 25480598 - 25480546
Alignment:
Q  36 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    ||||||||||||||||||||| | |||  |||||||||||||| ||||||||||    
T  25480598 agtgtatattttaacataagatg-ggaggggagtataattcaagcatctttaag 25480546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 32222069 - 32222136
Alignment:
Q  9 gtagattatacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    ||||||| |||||||||||| ||||  ||||||||||||||||||||| | |||| ||||| ||||||||    
T  32222069 gtagattttacttttcaagg-aaggtaagtgtatattttaacataagaag-ggaagggagtgtaattcaa 32222136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 40036383 - 40036423
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  40036383 tactttgcaaggga-ggggagtgtatattttaacataagagg 40036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 44500030 - 44500097
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| || ||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  44500030 tacttttcaagaga-gggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 44500097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 49765120 - 49765183
Alignment:
Q  21 tttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  49765120 tttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 49765183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 3089831 - 3089799
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  3089831 aggggaggggagtgtatattttaacataagagg 3089799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 5963138 - 5963106
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  5963138 aggggaggggagtgtatattttaacataagagg 5963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 10887791 - 10887732
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  10887791 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 10887732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 37183159 - 37183100
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  37183159 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaaacatcttt 37183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 40927574 - 40927542
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  40927574 aggggaggggagtgtatattttaacataagagg 40927542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 49080604 - 49080636
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  49080604 aggggaggggagtgtatattttaacataagagg 49080636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 53490129 - 53490071
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||| |||||||||||||||||||||| |||| | ||| |||||||| |||||||    
T  53490129 agggaagggg-gtgtatattttaacataagagg-ggaatgaagtgtaattcaagcatcttt 53490071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 4437976 - 4438033
Alignment:
Q  28 ggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  4437976 ggaaggggagtgtatattttaacataagagg-ggagaggagtgtaattcaaacatcttt 4438033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 37009647 - 37009714
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||| || |||||||    
T  37009647 tacttttcaaggga-ggggagtgtatattttaacataagagg-ggagaggagtgtaatttaagcatcttt 37009714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 37199587 - 37199654
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  37199587 tacttttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 37199654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 6229872 - 6229912
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  6229872 tacttttcaaggga-ggggagtgtatattttaacataagagg 6229912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 34173701 - 34173768
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  34173701 tacttttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 34173768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 17829129 - 17829070
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  17829129 aggggaggggagtgtatattttaacataagagg-ggagtggagtgtaattcaagcatcttt 17829070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 33146119 - 33146081
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  33146119 cttttcaaggga-ggggagtgtatattttaacataagagg 33146081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 37329783 - 37329745
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagagga 59  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  37329783 ttttcaaggga-ggggagtgtatattttaacataagagga 37329745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 3045004 - 3044974
Alignment:
Q  28 ggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||||||||||||||||||||    
T  3045004 ggaaggggagtgtatattttaacataagagg 3044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 10357116 - 10357177
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||| ||||    
T  10357116 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcattaa 10357177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 38910743 - 38910690
Alignment:
Q  36 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 90  Q
    ||||||||||||||||||||| |||||  ||||| |||||||| |||||||||||    
T  38910743 agtgtatattttaacataaga-gaggaggggagtgtaattcaaacatctttaaga 38910690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 3515460 - 3515500
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  3515460 tacttttcaaagga-ggggagtgtatattttaacataagagg 3515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 11564456 - 11564496
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  11564456 tacttttcaaggga-ggagagtgtatattttaacataagagg 11564496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 11942943 - 11942995
Alignment:
Q  36 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    ||||||||||||||||||| |||| || | ||||||||||||| ||||||||||    
T  11942943 agtgtatattttaacataaaagga-gagatgagtataattcaaacatctttaag 11942995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 13873990 - 13874042
Alignment:
Q  35 gagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||||||||||||||||||||| ||||| | |||| |||||||| |||||||||    
T  13873990 gagtgtatattttaacataaga-gaggagaagagtgtaattcaaacatctttaa 13874042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 14014115 - 14014167
Alignment:
Q  35 gagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||||||||||||||||||||| ||||| | |||| |||||||| |||||||||    
T  14014115 gagtgtatattttaacataaga-gaggagaagagtgtaattcaaacatctttaa 14014167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 28167626 - 28167559
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||| |||||| || |||||||||||||||||||||||| | |  ||||| ||||||||||||||||    
T  28167626 tactttttaaggga-ggagagtgtatattttaacataagagg-gaaggggagtgtaattcaatcatcttt 28167559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 31597311 - 31597271
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  31597311 tacttttcaaggga-ggggagtttatattttaacataagagg 31597271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 31709153 - 31709113
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  31709153 tacttttcaagg-aagggaagtgtatattttaacataagagg 31709113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 40769357 - 40769397
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  40769357 tacttttcaaggga-ggagagtgtatattttaacataagagg 40769397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 4437390 - 4437358
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    ||||||||||| |||||||||||||||||||||    
T  4437390 agggaaggggattgtatattttaacataagagg 4437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 5474702 - 5474670
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  5474702 aggggaggggagtgtatattttaacataagagg 5474670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 15006508 - 15006476
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  15006508 aggggaggggagtgtatattttaacataagagg 15006476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 20894276 - 20894335
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  20894276 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 20894335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 33146698 - 33146730
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  33146698 aggggaggggagtgtatattttaacataagagg 33146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 34173124 - 34173092
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  34173124 aggggaggggagtgtatattttaacataagagg 34173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 35175700 - 35175668
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  35175700 aggggaggggagtgtatattttaacataagagg 35175668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 37199002 - 37198970
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  37199002 aggggaggggagtgtatattttaacataagagg 37198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 41521663 - 41521695
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  41521663 aggggaggggagtgtatattttaacataagagg 41521695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 43439789 - 43439828
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggag 60  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  43439789 ttttcaaggga-ggagagtgtatattttaacataagaggag 43439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 40401539 - 40401606
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  40401539 tacttttcaagggaaggg-agtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 40401606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 32867898 - 32867957
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  32867898 aggggaggggagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 32867957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 16425997 - 16426050
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtata 72  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  16425997 tacttttcaaggga-ggggagtgtatattttaacataagagg-ggaagggagtata 16426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 20261569 - 20261609
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  20261569 tacttttcaaggga-ggggagtgtatattttaacataagagg 20261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 31221443 - 31221510
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||  ||||| |||||||| |||||||    
T  31221443 tacttttcaaggga-ggggagtgtatattttaacataagaag-ggaggggagtgtaattcaagcatcttt 31221510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 14078435 - 14078376
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||    
T  14078435 aggggaggggagtgtatattttaacataagagg-ggaagagagtttaattcaagcatcttt 14078376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 14388463 - 14388404
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||    
T  14388463 aggggaggggagtgtatattttaacataagagg-ggaagagagtttaattcaagcatcttt 14388404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 28308661 - 28308700
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggag 60  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28308661 ttttcaaggga-ggggagtgtatattttaacataagaggag 28308700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 48872098 - 48872059
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  48872098 tacttttcaaggga-ggggagtgtatattttaacataagag 48872059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 25607607 - 25607669
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| ||||||||||    
T  25607607 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaaacatctttaag 25607669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 2935766 - 2935815
Alignment:
Q  36 agtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||| |||| ||||| |||||||| |||||||    
T  2935766 agtgtatattttaacataagagg-ggaagggagtgtaattcaagcatcttt 2935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 33869272 - 33869238
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggag 60  Q
    |||| ||||||||||||||||||||||||||||||    
T  33869272 aggggaggggagtgtatattttaacataagaggag 33869238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 3391844 - 3391804
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  3391844 tactttttaaggga-ggggagtgtatattttaacataagagg 3391804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 11639983 - 11639916
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||| ||| || |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  11639983 tacttttcaaagga-ggagagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 11639916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 12677186 - 12677146
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  12677186 tacttttcatggga-ggggagtgtatattttaacataagagg 12677146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 27619621 - 27619688
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||| |||||| | ||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  27619621 tactttttaaggga-gaggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 27619688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 36687369 - 36687313
Alignment:
Q  32 ggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    ||||||||||||||||||||||||||| |||  | ||| |||||||| ||||||||||    
T  36687369 ggggagtgtatattttaacataagagg-ggagggaagtgtaattcaagcatctttaag 36687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 36848503 - 36848555
Alignment:
Q  36 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||||||||||||||||||||||| || | |||| |||||||| ||||||||||    
T  36848503 agtgtatattttaacataagagga-gagaagagtgtaattcaagcatctttaag 36848555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 38987839 - 38987772
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| || | ||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  38987839 tacttttcaagaga-gtggagtgtatattttaacataagagg-ggaggggagtttaattcaagcatcttt 38987772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 25335 - 25276
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  25335 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 25276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 317357 - 317298
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  317357 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 317298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 14753878 - 14753906
Alignment:
Q  32 ggggagtgtatattttaacataagaggag 60  Q
    |||||||||||||||||||||||||||||    
T  14753878 ggggagtgtatattttaacataagaggag 14753906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 19156071 - 19156130
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||| ||||||||||||||||||||||| ||| | |||| |||||||| |||||||    
T  19156071 aggggagggaagtgtatattttaacataagagg-ggagatgagtgtaattcaaacatcttt 19156130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 20755470 - 20755529
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||| ||||||||||||||||||||||| ||| | |||| |||||||| |||||||    
T  20755470 aggggagggaagtgtatattttaacataagagg-ggagatgagtgtaattcaaacatcttt 20755529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 27144260 - 27144228
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  27144260 aggggaggggagtgtatattttaacataagagg 27144228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 27144842 - 27144897
Alignment:
Q  32 ggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    ||||||||||||||||||||||||| || || | |||| |||||||| |||||||||    
T  27144842 ggggagtgtatattttaacataagaaga-gagaagagtgtaattcaagcatctttaa 27144897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 34999264 - 34999232
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  34999264 aggggaggggagtgtatattttaacataagagg 34999232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 36688847 - 36688917
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||||||||||||| ||  ||||||||||||||||||||||| |||  ||||| ||||||||  |||||||||    
T  36688847 tacttttcaaggga-ggaaagtgtatattttaacataagagg-ggaggggagtgtaattcaaagatctttaag 36688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 36847911 - 36847879
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  36847911 aggggaggggagtgtatattttaacataagagg 36847879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 48982534 - 48982566
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  48982534 aggggaggggagtgtatattttaacataagagg 48982566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 16536458 - 16536391
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  16536458 tacttttcaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 16536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 8061104 - 8061042
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    ||||||||||||||||||||||||||||||| |||||   |||| |||||||| ||||||||||    
T  8061104 agggaaggggagtgtatattttaacataaga-gaggaggagagtgtaattcaagcatctttaag 8061042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 45559752 - 45559819
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||| ||||||| |||||||||||||||||||||| ||  ||||| |||||||| |||||||    
T  45559752 tacttttcaagg-aaggggattgtatattttaacataagagga-gatgggagtgtaattcaagcatcttt 45559819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 17109391 - 17109352
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  17109391 tacttttcaaggga-ggggagtgtatattttaacataagag 17109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 18406613 - 18406547
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||  ||||| |||||||| |||||||||    
T  18406613 ttttcaaggga-gggtagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatctttaa 18406547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 31765417 - 31765351
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 90  Q
    ||||||||||| ||||||||||||||| ||||||||   ||||||||||| |||||||  |||||||||||    
T  31765417 ttttcaaggga-ggggagtgtatatttgaacataag---aggaaaggagtgtaattcatgcatctttaaga 31765351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 45738666 - 45738725
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  45738666 aggggagggaagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 45738725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 60
Target Start/End: Complemental strand, 46682750 - 46682719
Alignment:
Q  29 gaaggggagtgtatattttaacataagaggag 60  Q
    ||||||||||||||||||||||||||||||||    
T  46682750 gaaggggagtgtatattttaacataagaggag 46682719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 50143475 - 50143406
Alignment:
Q  13 attatacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 84  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||    
T  50143475 attatatttttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaaacatct 50143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 28044555 - 28044498
Alignment:
Q  28 ggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||| |||||||||||||||||||| | || ||| |||||||||||||| |||||||    
T  28044555 ggaaggagagtgtatattttaacataa-aagacgaagggagtataattcaagcatcttt 28044498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 29510474 - 29510535
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||| |||||||||||||||||||||||||||| | |  ||||| |||||||| |||||||||    
T  29510474 aggggaggggagtgtatattttaacataagagg-gaaggggagtgtaattcaaacatctttaa 29510535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 45737388 - 45737324
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| || |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  45737388 ttttcaaggga-ggagagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 45737324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 27225762 - 27225722
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  27225762 tacttttcaaggga-gggaagtgtatattttaacataagagg 27225722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 36604813 - 36604746
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||| ||| ||| ||||||||||||||||||||||| | | |||||| |||||||| |||||||    
T  36604813 tacttttcaaagga-gggaagtgtatattttaacataagagg-gaagaggagtgtaattcaagcatcttt 36604746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 45195233 - 45195266
Alignment:
Q  25 aagggaaggggagtgtatattttaacataagagg 58  Q
    ||||| ||||||||||||||||||||||||||||    
T  45195233 aaggggaggggagtgtatattttaacataagagg 45195266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 19072354 - 19072413
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||||||||||||||||||| |||||| |||||  ||||| |||||||| |||||||    
T  19072354 aggggaggggagtgtatattttaatataaga-gaggaggggagtgtaattcaaacatcttt 19072413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 19120244 - 19120303
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||||||||||||||||||| |||||| |||||  ||||| |||||||| |||||||    
T  19120244 aggggaggggagtgtatattttaatataaga-gaggaggggagtgtaattcaaacatcttt 19120303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 41575252 - 41575193
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||||||||| |||||||||||||||||| | | |||||| |||||||| |||||||    
T  41575252 aggggaggggagtgcatattttaacataagagg-gaagaggagtgtaattcaagcatcttt 41575193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 42831189 - 42831228
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  42831189 tacttttcaaagga-ggggagtgtatattttaacataagag 42831228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 35751595 - 35751536
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||    
T  35751595 aggggaggggagtgtatattttaacataagagg-ggaagggagtgtaattcaagcatcttt 35751536  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 27979318 - 27979251
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  27979318 tacttttcaaggga-ggggaatgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 27979251  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 36737439 - 36737506
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||  ||||| |||||||| ||||||||||    
T  36737439 ttttcaaggga-gggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaag 36737506  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 9118906 - 9118851
Alignment:
Q  34 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 90  Q
    ||||||||||||||||| |||||| ||||| ||||| |||||||| |||||||||||    
T  9118906 ggagtgtatattttaacttaagag-aggaagggagtgtaattcaaacatctttaaga 9118851  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 19408618 - 19408559
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  19408618 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 19408559  T

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Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 20183439 - 20183380
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||||||||||| | |||  ||||| |||||||| |||||||    
T  20183439 agggaaggggagtgtatattttaacataagaag-ggaggggagtgtaattcaagcatcttt 20183380  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 15144486 - 15144432
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||||||||||||||||||||| || ||||||| |||||||||| |||||||    
T  15144486 agggaagtgtatattttaacataaga-gatgaaaggaatataattcaaacatcttt 15144432  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 20570207 - 20570150
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 84  Q
    |||| |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||    
T  20570207 aggggaggggagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatct 20570150  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 8573336 - 8573376
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  8573336 tacttttcaaagga-ggggagtgtatattttaacataagagg 8573376  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 14594156 - 14594116
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  14594156 tacttttcaaggga-gggaagtgtatattttaacataagagg 14594116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 20259991 - 20260031
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  20259991 tacttttcaaggga-gaggagtgtatattttaacataagagg 20260031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 36762201 - 36762134
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||| |||||||||||||| |||||||| |||  ||||| |||||||| |||||||    
T  36762201 tacttttcaaggga-gggaagtgtatattttaaaataagagg-ggaggggagtgtaattcaagcatcttt 36762134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 1932025 - 1932076
Alignment:
Q  34 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||| ||||||||||||||||| |||||  |||||||||||||| |||||||    
T  1932025 ggagtatatattttaacataaga-gaggaggggagtataattcaaacatcttt 1932076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 4877370 - 4877402
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  4877370 aggggaggggagtgtatattttaacataagagg 4877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 9017726 - 9017667
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  9017726 aggggagggaagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 9017667  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 21639097 - 21639038
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||| |||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  21639097 aggggaggagagtgtatattttaacataagagg-ggagtggagtgtaattcaagcatcttt 21639038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 27028644 - 27028699
Alignment:
Q  34 ggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 90  Q
    ||||| ||||||||||||||||| |||||  ||||| |||||||| |||||||||||    
T  27028644 ggagtatatattttaacataaga-gaggaggggagtgtaattcaagcatctttaaga 27028699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 36742577 - 36742609
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  36742577 aggggaggggagtgtatattttaacataagagg 36742609  T

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Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 37708854 - 37708795
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  37708854 aggggaggggagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 37708795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 17722829 - 17722768
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  17722829 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaa 17722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 45847768 - 45847825
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||||||||||||||||||||||||| ||||| |||| | |||||||| ||||||||||    
T  45847768 aggggagtgtatattttaacataaga-gaggagaggattgtaattcaagcatctttaag 45847825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 754955 - 754888
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| |  |||||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  754955 tacttttcaaggga-gatgagtgtatattttaacataagagg-ggagaggagtgtaattcaagcatcttt 754888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 13482270 - 13482230
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13482270 tacttttcaaggga-ggggagtgtatattttaacataagagg 13482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 35666039 - 35665972
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| ||  ||||||||||||||||||||| ||||| || |||||||||||| |||||||    
T  35666039 tacttttcaaggga-ggtaagtgtatattttaacataaga-gaggagagaagtataattcaagcatcttt 35665972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 55068930 - 55068863
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||| ||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  55068930 tactttacaaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 55068863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 755522 - 755581
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||| |||||||||||||| |||||||| |||  |||||||||||||| |||||||    
T  755522 agggaagggaagtgtatattttaatataagagg-ggaggggagtataattcaagcatcttt 755581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 26705665 - 26705724
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||||    
T  26705665 aggggaggggagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatcttt 26705724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 35667279 - 35667338
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  35667279 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 35667338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 16192316 - 16192370
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||||||||||||||| |||||  ||||| |||||||| |||||||    
T  16192316 aggggagtgtatattttaacataaga-gaggaggggagtgtaattcaagcatcttt 16192370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 41919909 - 41919963
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||||||||||||||| ||||| | |||| |||||||| |||||||    
T  41919909 aggggagtgtatattttaacataaga-gaggagaagagtgtaattcaagcatcttt 41919963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 23722042 - 23722106
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  23722042 ttttcaaggga-gggtagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 23722106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 35667758 - 35667811
Alignment:
Q  32 ggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  35667758 ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 35667811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 37147823 - 37147767
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||| |||||| ||||||||    
T  37147823 ttttcaaggga-gggaagtgtatattttaacataagagg-ggagaggagtgtaattcaa 37147767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 51268537 - 51268593
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataatt 75  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||||| |||||| |||||    
T  51268537 tacttttcaagg-aagtggagtgtatattttaacataaga-gaggagaggagtgtaatt 51268593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 721967 - 722026
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    |||||||||||||| |  |||||||||||||||||||||||| ||| |||||| ||||||||    
T  721967 tacttttcaaggga-gatgagtgtatattttaacataagagg-ggagaggagtgtaattcaa 722026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 7479334 - 7479374
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  7479334 tacttttcaaggga-gggaagtgtatattttaacataagagg 7479374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 25010045 - 25010085
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  25010045 tacttttcaagggaatgg-agtgtatattttaacataagagg 25010085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 35667369 - 35667409
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  35667369 tacttttcaaggga-gggaagtgtatattttaacataagagg 35667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 36898089 - 36898129
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagaggag 60  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  36898089 cttttcaaggga-ggggagtgtatattttaacataaaaggag 36898129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 51019738 - 51019698
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  51019738 tacttttcaaggga-gggaagtgtatattttaacataagagg 51019698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 721401 - 721342
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||| |||||||||||||| |||||||| |||  ||||| |||||||| |||||||    
T  721401 agggaagggaagtgtatattttaatataagagg-ggaggggagtgtaattcaagcatcttt 721342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 796462 - 796403
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  796462 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 796403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 4950018 - 4949956
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatct 84  Q
    |||| |||||||||| ||||||||||||||||||||| |||||  ||||| |||||||| |||||    
T  4950018 tttttaagggaaggg-agtgtatattttaacataaga-gaggaggggagtgtaattcaaacatct 4949956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 8192986 - 8193045
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  8192986 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 8193045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 16960284 - 16960252
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  16960284 aggggaggggagtgtatattttaacataagagg 16960252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 16960878 - 16960921
Alignment:
Q  34 ggagtgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||    
T  16960878 ggagtgtatattttaacataagagga-gaggggagtataattcaa 16960921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30193159 - 30193229
Alignment:
Q  18 acttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaaga 90  Q
    |||||||||| |||||| || |||||||| ||||||||| | |||| ||||| |||||||| |||||||||||    
T  30193159 acttttcaagagaaggg-agcgtatatttcaacataagaag-ggaagggagtgtaattcaaacatctttaaga 30193229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 33047232 - 33047287
Alignment:
Q  33 gggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaag 89  Q
    |||||||||||||||||||||||||| |||  ||||| |||||||| || |||||||    
T  33047232 gggagtgtatattttaacataagagg-ggaggggagtgtaattcaaacaactttaag 33047287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 14710 - 14763
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtata 72  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  14710 tacttttcaaggga-ggggagtgtatattttaacataagagg-ggaagggagtata 14763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 28856 - 28909
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtata 72  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  28856 tacttttcaaggga-ggggagtgtatattttaacataagagg-ggaagggagtata 28909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 421234 - 421167
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  421234 tacttttctaggga-ggggagtgtatattttaacataagagg-ggaggggagtgtaattcaaacatcttt 421167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 421925 - 421984
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||| ||||||||||| ||||||||||| |||| ||||| |||||||| |||||||    
T  421925 aggggagggaagtgtatatttaaacataagagg-ggaagggagtgtaattcaagcatcttt 421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 7448891 - 7448937
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  7448891 aggggagtgtatattttaacataagagg-ggaaaggagtgtaattcaa 7448937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 11794763 - 11794824
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||||||||||||||| |||||||||||||||| |||  ||||| |||||||| |||||||||    
T  11794763 agggaaggggagtgtaaattttaacataagagg-ggatgggagtgtaattcaaccatctttaa 11794824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 21802592 - 21802632
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  21802592 tacttttcaaggga-ggggagtgtatattttaacataagagg 21802632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 32114395 - 32114462
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||||| | |||||||||||||||||||||||||| || || ||| |||||||| |||||||    
T  32114395 tacttttcaaggga-gaggagtgtatattttaacataagagga-gagagaagtgtaattcaagcatcttt 32114462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 12026193 - 12026252
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  12026193 aggggaggggagtgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 12026252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 12693924 - 12693865
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| ||||||||||||||||||||||||||||| || || ||| |||||||| |||||||    
T  12693924 aggggaggggagtgtatattttaacataagagga-gagagaagtgtaattcaagcatcttt 12693865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 15499484 - 15499523
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  15499484 tacttttcaaggga-ggggagtgtatattttaacataagag 15499523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 10702925 - 10702989
Alignment:
Q  20 ttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||| || ||| |||||||| |||||||    
T  10702925 ttttcaaggga-gggaagtgtatattttaacataagagg-ggagagaagtgtaattcaagcatcttt 10702989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 31282233 - 31282274
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagga 59  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  31282233 tacttttcaagggaggggg-gtgtatattttaacataagagga 31282274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 32522499 - 32522560
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    ||||||||| ||||||||||||||||||||| || || | |||| |||||||| |||||||||    
T  32522499 agggaagggaagtgtatattttaacataaga-gatgagatgagtgtaattcaaacatctttaa 32522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 188434 - 188490
Alignment:
Q  31 aggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||||    
T  188434 aggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatctttaa 188490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 2522755 - 2522715
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  2522755 tacttttcaaggga-ggggagtgtatattttaatataagagg 2522715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 14306878 - 14306838
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  14306878 tacttttcaagg-aagggaagtgtatattttaacataagagg 14306838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 22342184 - 22342144
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  22342184 tacttttcaaggga-gggaagtgtatattttaacataagagg 22342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 4100593 - 4100561
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  4100593 aggggaggggagtgtatattttaacataagagg 4100561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 4125955 - 4125923
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  4125955 aggggaggggagtgtatattttaacataagagg 4125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 10702349 - 10702317
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  10702349 aggggaggggagtgtatattttaacataagagg 10702317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 11522878 - 11522819
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  11522878 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 11522819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 12033113 - 12033172
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  12033113 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 12033172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 14313845 - 14313904
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||| ||||||||||||||||||||| |||  ||||| |||||||| |||||||    
T  14313845 aggggaggggattgtatattttaacataagagg-ggaggggagtgtaattcaagcatcttt 14313904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 22342274 - 22342208
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatctt 85  Q
    |||||||||||||| ||| ||||||||||||||||||||| | ||| | |||| |||||||| ||||||    
T  22342274 tacttttcaaggga-gggaagtgtatattttaacataagaag-ggatatgagtgtaattcaagcatctt 22342208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 32113817 - 32113785
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  32113817 aggggaggggagtgtatattttaacataagagg 32113785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 32131014 - 32130982
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    ||||||||| |||||||||||||||||||||||    
T  32131014 agggaagggaagtgtatattttaacataagagg 32130982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 32521902 - 32521863
Alignment:
Q  38 tgtatattttaacataagaggaggaaaggagtataattcaa 78  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  32521902 tgtatattttaacataagagg-ggaaaggagtgtaattcaa 32521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 34794528 - 34794579
Alignment:
Q  36 agtgtatattttaacataagaggaggaaaggagtataattcaatcatctttaa 88  Q
    ||||||||||||||||||||||| |||  ||||| |||||||| |||||||||    
T  34794528 agtgtatattttaacataagagg-ggaggggagtgtaattcaagcatctttaa 34794579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 11376 - 11336
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  11376 tacttttcaaggga-ggggagtgtatattttaacataagagg 11336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 59347 - 59307
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  59347 tacttttcaaggga-ggggagtgtatattttaacataagagg 59307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 12855 - 12914
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||| ||||||||||||||||||| ||||||  |||| |||||||| |||||||    
T  12855 agggaaggggaatgtatattttaacataaga-gaggaagagagtgtaattcaaacatcttt 12914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 2308 - 2243
Alignment:
Q  19 cttttcaagggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||||||||||| |||||||||| |||||||||||||||| |||  ||||| |||||||| |||||||    
T  2308 cttttcaaggga-ggggagtgtaaattttaacataagagg-ggaggggagtgtaattcaagcatcttt 2243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 185172 - 185212
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagagg 58  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  185172 tacttttcaagg-aaggagagtgtatattttaacataagagg 185212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 11245 - 11284
Alignment:
Q  17 tacttttcaagggaaggggagtgtatattttaacataagag 57  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  11245 tacttttcaaagga-ggggagtgtatattttaacataagag 11284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 3487 - 3455
Alignment:
Q  26 agggaaggggagtgtatattttaacataagagg 58  Q
    |||| ||||||||||||||||||||||||||||    
T  3487 aggggaggggagtgtatattttaacataagagg 3455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 15324 - 15383
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    ||||||||||||| |||||||||||| ||||||| ||  ||||| |||||||| |||||||    
T  15324 agggaaggggagtctatattttaacaaaagagga-gacgggagtgtaattcaagcatcttt 15383  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 19642 - 19701
Alignment:
Q  26 agggaaggggagtgtatattttaacataagaggaggaaaggagtataattcaatcatcttt 86  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| |||||||| |||||||    
T  19642 aggggaggggagtgtatattttaacttaagagg-ggaggggagtgtaattcaagcatcttt 19701  T

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