View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14945_low_13 (Length: 318)
Name: NF14945_low_13
Description: NF14945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14945_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 9 - 296
Target Start/End: Complemental strand, 40770412 - 40770125
Alignment:
| Q |
9 |
gaagaaaatgagaagacaaaagtagagaataggtaaggtgctagaaaaggaagatataaaagctttcaaatatcaatattagacattaattcaataatat |
108 |
Q |
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| T |
40770412 |
gaagaaaatgagaagacaaaagtagagaataggtaaggtgctagaaaaggaagatataaaagctttcgaatatcaatattagacattaatttaataatat |
40770313 |
T |
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| Q |
109 |
ccaattcaattttctataatgactaggtgaatgatatcttcttattcttatgataattaatgtcaattagggcatataagatgcaatctgctgttgattt |
208 |
Q |
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| T |
40770312 |
ccaattcaattttctataatgactaggtgaatgatatcttcttattcttatgataattaatgtcaattagggcatataagatgcaatctgctgttgattt |
40770213 |
T |
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| Q |
209 |
gtgggaggataataagaaagcatcaattgaagcaaaattcaaaggaattgaggtcaaatgtgctcaatttttgcatcaatttgattga |
296 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
40770212 |
gtgggaggatgataagaaagcatcaattgaagcaaaattcaaaggaattgaggtcagatgtgctcaatttttgcatcaatttgattga |
40770125 |
T |
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