View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14945_low_19 (Length: 277)
Name: NF14945_low_19
Description: NF14945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14945_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 9 - 261
Target Start/End: Complemental strand, 31465736 - 31465484
Alignment:
| Q |
9 |
ataattcttcataaccataaacctaaatttcatttatctatattgtttgtgtgattgttaacattttcttgaaaaatcaaaacatgagtccttcacaatt |
108 |
Q |
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| T |
31465736 |
ataattcttcataaccataaacctaaatttcatttatctatattgtttgtgtgattgttaacattttcttgaaaaatcaaaacatgagtccttcacaatt |
31465637 |
T |
|
| Q |
109 |
tcatccaaagaaagaaatcatctcaaccaccacaaaatctaacaccaacgttaatggattgttaccaccacatttgaaaatcaataaagattctcatttc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31465636 |
tcatccaaagaaagaaatcatctcaaccaccacaaaatctaacaccaacgttaatggattgttaccaccacatttgaaaatcaataaagattctcatttc |
31465537 |
T |
|
| Q |
209 |
atcaaaaaatcatcaccatcaccaccgtcgtcttcatcgtcgtcctcatcatc |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31465536 |
atcaaaaaatcatcaccatcaccaccgtcgtcttcatcgtcgtcctcatcatc |
31465484 |
T |
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