View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14945_low_23 (Length: 230)
Name: NF14945_low_23
Description: NF14945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14945_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 21731815 - 21732026
Alignment:
| Q |
1 |
aaaaatgaaggagtccaaagttggaataagaatcaatgagtttggaggaaagagaagagttctgatggagaccatggaggaagaatctagcatggatttg |
100 |
Q |
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| T |
21731815 |
aaaaatgaaggagtccaaagttggaataagaatcaatgagtttggaggaaagagaagagttttgatggagaccatggaggaagaatctagcatggatttg |
21731914 |
T |
|
| Q |
101 |
ttgaaggtgttgtggttttgtgcagagatttaatatagaagaggttgtgttgaaaaaccttgttgtttgaaaaggtttaatgttggtgattttgagaatg |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
21731915 |
ttgaaggtattgtggttttgtgcagagatttaatatagaagaggttgtgttgaaaaaccttgttgtttgaaaaggtttaatgttcgtgattttgagaatg |
21732014 |
T |
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| Q |
201 |
ttaaggtagacc |
212 |
Q |
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|||||||||||| |
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| T |
21732015 |
ttaaggtagacc |
21732026 |
T |
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