View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14946_high_9 (Length: 203)
Name: NF14946_high_9
Description: NF14946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14946_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 41010908 - 41010747
Alignment:
| Q |
15 |
aattatgtattatctaaactttccatgatctttttaactaaatccacaaggcgataagataatacataattggaaatgtagcgaattgaataagctttga |
114 |
Q |
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| T |
41010908 |
aattatgtattatctaaactttccatgatctttttaactaaatccacaaggcgataagataatacataattggaaatgtagtgaattgaataagctttga |
41010809 |
T |
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| Q |
115 |
catttgacaagtctaaaggactagcgttggaaatgtat--agctactacaatattttatgat |
174 |
Q |
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| T |
41010808 |
catttgacaagtctaaaggactagcgttggaaatgtatagagctactacaatattttatgat |
41010747 |
T |
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