View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14946_low_11 (Length: 222)

Name: NF14946_low_11
Description: NF14946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14946_low_11
NF14946_low_11
[»] chr8 (30 HSPs)
chr8 (1-222)||(16199509-16199730)
chr8 (1-222)||(31971292-31971513)
chr8 (1-222)||(45130861-45131082)
chr8 (1-222)||(21918863-21919086)
chr8 (1-222)||(20536243-20536466)
chr8 (1-221)||(22626771-22626992)
chr8 (1-222)||(18879100-18879317)
chr8 (1-185)||(21395883-21396066)
chr8 (1-185)||(21790376-21790559)
chr8 (1-180)||(21389358-21389536)
chr8 (1-167)||(21778697-21778862)
chr8 (1-221)||(18818273-18818495)
chr8 (1-221)||(21923792-21924014)
chr8 (1-221)||(28648908-28649130)
chr8 (103-221)||(25363004-25363123)
chr8 (42-221)||(23648630-23648810)
chr8 (1-195)||(7372813-7373001)
chr8 (1-194)||(23406414-23406611)
chr8 (1-220)||(6759293-6759512)
chr8 (1-220)||(22875100-22875321)
chr8 (1-220)||(16092206-16092428)
chr8 (1-62)||(5866298-5866360)
chr8 (1-62)||(17140951-17141013)
chr8 (1-62)||(21491030-21491092)
chr8 (1-83)||(6520403-6520486)
chr8 (1-62)||(13508109-13508171)
chr8 (1-43)||(38855295-38855337)
chr8 (1-46)||(983447-983492)
chr8 (1-34)||(23760897-23760930)
chr8 (1-84)||(21285632-21285716)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-222)||(32102-32322)
[»] chr7 (27 HSPs)
chr7 (1-222)||(40443426-40443647)
chr7 (1-220)||(10589074-10589294)
chr7 (1-222)||(9509224-9509447)
chr7 (4-213)||(26212034-26212245)
chr7 (1-222)||(27847696-27847916)
chr7 (1-218)||(12698866-12699086)
chr7 (1-220)||(16386112-16386334)
chr7 (1-220)||(38227516-38227736)
chr7 (1-179)||(18456319-18456498)
chr7 (1-220)||(3564229-3564450)
chr7 (19-98)||(2530126-2530205)
chr7 (67-171)||(12187115-12187218)
chr7 (67-171)||(17137978-17138081)
chr7 (4-84)||(16056366-16056446)
chr7 (1-62)||(28505322-28505384)
chr7 (1-62)||(34200821-34200883)
chr7 (1-136)||(16213716-16213852)
chr7 (1-43)||(67780-67822)
chr7 (1-116)||(13647360-13647476)
chr7 (1-62)||(16495437-16495499)
chr7 (2-86)||(16219717-16219802)
chr7 (1-170)||(2280033-2280205)
chr7 (1-43)||(811175-811217)
chr7 (1-43)||(22072948-22072990)
chr7 (1-43)||(44014213-44014255)
chr7 (1-84)||(48273424-48273508)
chr7 (1-30)||(18005681-18005710)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-222)||(10289-10509)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-222)||(13532-13753)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-222)||(15328-15549)
scaffold0114 (67-135)||(7391-7459)
[»] chr4 (29 HSPs)
chr4 (1-221)||(12902792-12903014)
chr4 (4-222)||(14053165-14053384)
chr4 (1-222)||(7088912-7089135)
chr4 (1-199)||(17046522-17046719)
chr4 (1-222)||(44052864-44053087)
chr4 (1-213)||(23374231-23374445)
chr4 (1-221)||(22636470-22636691)
chr4 (1-221)||(16377387-16377607)
chr4 (88-222)||(3096767-3096901)
chr4 (1-222)||(7893738-7893958)
chr4 (4-221)||(16239834-16240052)
chr4 (103-221)||(17047936-17048055)
chr4 (1-176)||(16270145-16270321)
chr4 (1-220)||(14038683-14038904)
chr4 (1-148)||(7798809-7798958)
chr4 (19-139)||(43256106-43256227)
chr4 (4-136)||(6899929-6900062)
chr4 (67-139)||(15121749-15121821)
chr4 (1-136)||(13800-13937)
chr4 (161-220)||(15091093-15091152)
chr4 (1-86)||(52873367-52873453)
chr4 (1-44)||(12288253-12288296)
chr4 (1-43)||(8846391-8846433)
chr4 (1-43)||(12774042-12774084)
chr4 (1-62)||(15551852-15551914)
chr4 (1-43)||(43198599-43198641)
chr4 (1-43)||(52243240-52243282)
chr4 (4-62)||(16596686-16596745)
chr4 (1-43)||(39706332-39706374)
[»] chr2 (22 HSPs)
chr2 (1-222)||(37979-38200)
chr2 (1-222)||(20309143-20309363)
chr2 (1-221)||(23285900-23286118)
chr2 (1-222)||(23654249-23654472)
chr2 (1-213)||(298686-298901)
chr2 (1-199)||(22731120-22731320)
chr2 (41-221)||(22738044-22738225)
chr2 (1-194)||(23060548-23060742)
chr2 (1-221)||(23076477-23076699)
chr2 (1-221)||(22337150-22337372)
chr2 (4-221)||(23660061-23660279)
chr2 (117-222)||(27753728-27753833)
chr2 (1-179)||(23708524-23708705)
chr2 (1-84)||(23103399-23103481)
chr2 (67-171)||(40622123-40622231)
chr2 (1-84)||(7735-7819)
chr2 (1-83)||(7679620-7679702)
chr2 (1-116)||(22105444-22105560)
chr2 (1-43)||(25175885-25175927)
chr2 (4-43)||(28406014-28406053)
chr2 (1-62)||(19671865-19671927)
chr2 (1-62)||(23071973-23072035)
[»] chr1 (24 HSPs)
chr1 (1-222)||(27250592-27250815)
chr1 (1-218)||(38801258-38801474)
chr1 (1-213)||(21026715-21026929)
chr1 (42-221)||(22354436-22354616)
chr1 (1-221)||(50210077-50210299)
chr1 (76-222)||(22356037-22356185)
chr1 (76-222)||(22357723-22357871)
chr1 (5-221)||(22532308-22532526)
chr1 (1-217)||(34509815-34510033)
chr1 (42-221)||(20135264-20135444)
chr1 (103-185)||(48603652-48603735)
chr1 (19-139)||(33797573-33797694)
chr1 (4-178)||(22468604-22468779)
chr1 (157-213)||(20847091-20847147)
chr1 (1-62)||(14295575-14295637)
chr1 (1-62)||(20918639-20918701)
chr1 (4-44)||(16758687-16758727)
chr1 (2-84)||(22237663-22237746)
chr1 (4-43)||(33681045-33681084)
chr1 (1-61)||(45574912-45574973)
chr1 (1-43)||(21754080-21754122)
chr1 (1-43)||(22921913-22921955)
chr1 (1-136)||(21861519-21861656)
chr1 (4-84)||(21896258-21896339)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-222)||(912-1134)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-222)||(167842-168064)
scaffold0011 (1-221)||(51948-52170)
[»] chr5 (33 HSPs)
chr5 (1-219)||(21292836-21293055)
chr5 (1-213)||(22075054-22075268)
chr5 (1-222)||(23390359-23390582)
chr5 (1-221)||(8286706-8286929)
chr5 (1-221)||(25421567-25421789)
chr5 (4-221)||(25431432-25431651)
chr5 (1-221)||(24493604-24493825)
chr5 (1-217)||(9077987-9078205)
chr5 (1-221)||(13025346-13025567)
chr5 (1-221)||(13095530-13095751)
chr5 (102-221)||(22107237-22107357)
chr5 (1-221)||(24529255-24529477)
chr5 (1-218)||(1096502-1096721)
chr5 (1-131)||(21808343-21808475)
chr5 (1-117)||(21729033-21729150)
chr5 (19-139)||(18356367-18356488)
chr5 (19-139)||(20910745-20910866)
chr5 (67-171)||(18769919-18770022)
chr5 (67-171)||(22032417-22032520)
chr5 (67-139)||(23572180-23572252)
chr5 (103-221)||(21986011-21986130)
chr5 (1-84)||(37723938-37724020)
chr5 (19-179)||(18418633-18418793)
chr5 (1-62)||(21997558-21997620)
chr5 (1-116)||(22144084-22144200)
chr5 (1-44)||(19660878-19660921)
chr5 (1-83)||(20026942-20027027)
chr5 (1-83)||(21329500-21329583)
chr5 (128-179)||(22412337-22412388)
chr5 (1-43)||(22959576-22959618)
chr5 (1-62)||(36314612-36314674)
chr5 (1-43)||(21565577-21565619)
chr5 (1-62)||(26012059-26012121)
[»] chr6 (26 HSPs)
chr6 (1-222)||(22831538-22831760)
chr6 (1-216)||(20360829-20361046)
chr6 (1-222)||(16920496-16920716)
chr6 (1-222)||(20638146-20638369)
chr6 (1-139)||(35245621-35245758)
chr6 (1-208)||(11185540-11185746)
chr6 (1-222)||(22780090-22780313)
chr6 (1-221)||(17287660-17287882)
chr6 (1-220)||(29060575-29060796)
chr6 (1-220)||(19303406-19303626)
chr6 (1-221)||(18409691-18409913)
chr6 (41-220)||(25629220-25629400)
chr6 (1-217)||(20593808-20594026)
chr6 (1-117)||(16496279-16496396)
chr6 (101-220)||(25603250-25603370)
chr6 (19-139)||(27415887-27416008)
chr6 (1-131)||(20076735-20076863)
chr6 (1-112)||(20109173-20109285)
chr6 (1-43)||(27333262-27333304)
chr6 (1-43)||(27394002-27394044)
chr6 (101-220)||(25611588-25611708)
chr6 (1-43)||(9098558-9098600)
chr6 (1-43)||(25644355-25644397)
chr6 (1-62)||(28496495-28496557)
chr6 (1-62)||(29808906-29808968)
chr6 (1-84)||(23019441-23019525)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-220)||(20946-21167)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-222)||(915-1135)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-222)||(16317-16537)
[»] chr3 (36 HSPs)
chr3 (1-222)||(20698299-20698521)
chr3 (1-222)||(13442309-13442532)
chr3 (1-222)||(17487891-17488114)
chr3 (1-222)||(17499373-17499596)
chr3 (1-211)||(12399244-12399456)
chr3 (4-221)||(14576697-14576915)
chr3 (1-220)||(14972889-14973110)
chr3 (1-221)||(26686922-26687144)
chr3 (1-220)||(23083226-23083447)
chr3 (1-221)||(14572624-14572845)
chr3 (103-220)||(16796685-16796803)
chr3 (1-194)||(43840967-43841162)
chr3 (2-217)||(18438570-18438787)
chr3 (1-179)||(24153115-24153294)
chr3 (2-221)||(25476249-25476470)
chr3 (41-221)||(40213585-40213766)
chr3 (103-185)||(14179570-14179653)
chr3 (1-221)||(11424627-11424845)
chr3 (42-222)||(30029917-30030097)
chr3 (5-180)||(42386449-42386627)
chr3 (1-43)||(12174303-12174345)
chr3 (1-62)||(13210351-13210413)
chr3 (1-43)||(16097363-16097405)
chr3 (1-43)||(32307712-32307754)
chr3 (1-43)||(49668120-49668162)
chr3 (67-135)||(856236-856304)
chr3 (1-84)||(15470959-15471043)
chr3 (1-83)||(14234522-14234605)
chr3 (4-62)||(53301575-53301634)
chr3 (1-43)||(9512955-9512997)
chr3 (1-43)||(9520930-9520972)
chr3 (1-31)||(28194725-28194755)
chr3 (1-43)||(52523773-52523815)
chr3 (1-130)||(12567592-12567722)
chr3 (1-130)||(13544057-13544187)
chr3 (1-84)||(27165282-27165366)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-218)||(13246-13465)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-222)||(1324-1544)
scaffold0106 (1-222)||(7301-7521)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-222)||(47031-47244)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-222)||(1886-2109)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-218)||(4747-4965)
scaffold0358 (41-218)||(12-189)
[»] scaffold0292 (2 HSPs)
scaffold0292 (2-221)||(3506-3727)
scaffold0292 (1-221)||(378-599)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-222)||(4994-5214)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-222)||(51617-51837)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-222)||(1987-2210)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-222)||(5984-6210)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-222)||(24164-24389)
[»] scaffold0021 (2 HSPs)
scaffold0021 (55-222)||(124675-124843)
scaffold0021 (1-84)||(174801-174883)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-221)||(38796-39017)
scaffold0145 (1-176)||(32977-33153)
[»] scaffold0403 (1 HSPs)
scaffold0403 (5-213)||(4888-5098)
[»] scaffold0309 (1 HSPs)
scaffold0309 (26-222)||(6669-6868)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-221)||(3015-3236)
[»] scaffold0026 (2 HSPs)
scaffold0026 (2-221)||(25932-26152)
scaffold0026 (2-221)||(39894-40113)
[»] scaffold0175 (2 HSPs)
scaffold0175 (16-221)||(13141-13349)
scaffold0175 (1-62)||(34158-34220)
[»] scaffold0231 (1 HSPs)
scaffold0231 (41-221)||(22958-23139)
[»] scaffold0228 (3 HSPs)
scaffold0228 (3-220)||(4544-4763)
scaffold0228 (3-220)||(12126-12345)
scaffold0228 (3-220)||(22078-22297)
[»] scaffold0484 (1 HSPs)
scaffold0484 (103-221)||(1052-1171)
[»] scaffold0165 (2 HSPs)
scaffold0165 (123-221)||(3640-3738)
scaffold0165 (123-221)||(7704-7802)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-217)||(39512-39729)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-194)||(8424-8615)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-221)||(39948-40169)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-217)||(75083-75300)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-217)||(339818-340033)
scaffold0003 (19-139)||(71353-71474)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-220)||(25930-26151)
scaffold0122 (119-220)||(33360-33461)
scaffold0122 (1-94)||(44699-44793)
[»] scaffold0130 (1 HSPs)
scaffold0130 (47-220)||(27912-28086)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-221)||(17079-17303)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-219)||(16466-16686)
[»] scaffold0215 (1 HSPs)
scaffold0215 (67-171)||(26924-27027)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-221)||(8514-8732)
[»] scaffold0235 (2 HSPs)
scaffold0235 (158-221)||(11377-11440)
scaffold0235 (1-82)||(11447-11529)
[»] scaffold0070 (1 HSPs)
scaffold0070 (70-220)||(4629-4779)
[»] scaffold0107 (1 HSPs)
scaffold0107 (19-139)||(15362-15483)
[»] scaffold0352 (1 HSPs)
scaffold0352 (144-221)||(17851-17928)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-220)||(32824-33042)
scaffold0120 (1-220)||(45963-46181)
[»] scaffold0046 (3 HSPs)
scaffold0046 (1-103)||(28449-28552)
scaffold0046 (1-62)||(11327-11389)
scaffold0046 (1-62)||(2032-2094)
[»] scaffold0084 (1 HSPs)
scaffold0084 (124-220)||(10323-10419)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-168)||(3103-3272)
[»] scaffold1124 (1 HSPs)
scaffold1124 (67-135)||(1977-2045)
[»] scaffold0210 (2 HSPs)
scaffold0210 (67-171)||(21721-21824)
scaffold0210 (67-171)||(29613-29716)
[»] scaffold0029 (1 HSPs)
scaffold0029 (67-139)||(12859-12931)
[»] scaffold0327 (1 HSPs)
scaffold0327 (41-190)||(3424-3575)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-136)||(53498-53635)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-112)||(8501-8613)
scaffold0621 (1-43)||(6570-6612)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-62)||(15696-15758)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-62)||(100409-100471)
scaffold0023 (1-34)||(119910-119943)
scaffold0023 (1-34)||(40227-40260)
[»] scaffold0305 (1 HSPs)
scaffold0305 (157-222)||(20596-20661)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-84)||(1067-1151)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-84)||(10543-10627)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-62)||(1093-1155)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-43)||(19299-19341)
[»] scaffold0100 (1 HSPs)
scaffold0100 (2-43)||(23927-23968)
[»] scaffold0074 (1 HSPs)
scaffold0074 (4-84)||(38704-38785)
[»] scaffold0031 (1 HSPs)
scaffold0031 (41-131)||(128826-128917)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-130)||(501116-501246)
scaffold0001 (1-43)||(160719-160761)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-84)||(2808-2892)
[»] scaffold0395 (1 HSPs)
scaffold0395 (102-221)||(827-947)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-83)||(12801-12884)
[»] scaffold0413 (1 HSPs)
scaffold0413 (2-84)||(12604-12687)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-43)||(1117-1159)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-43)||(6847-6889)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-62)||(11499-11561)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-43)||(6646-6688)
scaffold0333 (1-43)||(14026-14068)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-43)||(6167-6209)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-62)||(38280-38342)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-62)||(32571-32633)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-43)||(15821-15863)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-130)||(4726-4856)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-34)||(5678-5711)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-34)||(2698-2731)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-34)||(62233-62266)
[»] scaffold0010 (1 HSPs)
scaffold0010 (4-84)||(129943-130024)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-34)||(14750-14783)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-84)||(22672-22756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-171)||(69930-70000)


Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16199730 - 16199509
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  16199730 cagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaaatatt 16199631  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||     
T  16199630 cttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatc 16199531  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  16199530 ctacccaagggttcaactctcg 16199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31971292 - 31971513
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||| |||| ||||||||||||||||||  |||||||||||    
T  31971292 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtatacaaatat 31971390  T
Q  100 tcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||    
T  31971391 tcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataattaacctcattgttaagtcttaat 31971490  T
Q  200 gctgcccaaaggttcaactctcg 222  Q
     || |||||||||||| ||||||    
T  31971491 cctacccaaaggttcagctctcg 31971513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 45131082 - 45130861
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaa-ttcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||  |||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||| |||    
T  45131082 cagcttagttaaataacaa-cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtatacaattat 45130984  T
Q  100 tcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  45130983 tcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataattaacctcattattaagtcttaat 45130884  T
Q  200 gctgcccaaaggttcaactctcg 222  Q
     || ||||| ||| |||||||||    
T  45130883 cctacccaagggtccaactctcg 45130861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 21919086 - 21918863
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||||||| |||||||||| |||| ||||||    
T  21919086 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 21918988  T
Q  99 -ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     ||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||| ||||||||||||||  ||||||||||| || ||||||||||    
T  21918987 attcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagatcgtaattaacctcatcgttaagtctta 21918888  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    ||  | ||||| |||||||||||||    
T  21918887 atcttacccaagggttcaactctcg 21918863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 20536243 - 20536466
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| ||| |||||||||| ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  20536243 cagcttagttaaataacaa-cagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 20536341  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||| | | ||||||||||||||||||||  || ||||| |||||| ||| |||||||||||||||||||| || |||||||||||||    
T  20536342 ttcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaacatcctcattaagtctta 20536441  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    || || ||| |||||||||| ||||    
T  20536442 atactaccccaaggttcaacactcg 20536466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22626771 - 22626992
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||| || | ||| ||| |||||||||| |||| ||| |||    
T  22626771 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattcaattat 22626869  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     ||||||||||||  || | |||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||| || ||||||||||| ||    
T  22626870 acttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctcaa 22626969  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  22626970 tactaccccaaggttcaactctc 22626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 18879317 - 18879100
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||  |||||||||||| |||| |||||||||||||||||| |||| ||||||||    
T  18879317 cagcttagttaaataacaa-cagcaacataggcagtatacaaa-aaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaatatt 18879222  T
Q  101 cttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||||||||||||  ||||| ||||||||||||||||||||| || || || ||||||| ||||||||||||||||| ||||| || |||||||||||| |    
T  18879221 cttcaagtaatgctcataa-cattatatcacatcataatcaacatcagcacatcttat-cagcttcacagattatagttaacatcatcattaagtcttga 18879124  T
Q  199 tgctgcccaaaggttcaactctcg 222  Q
    ||||  || |||||||||||||||    
T  18879123 tgctatcccaaggttcaactctcg 18879100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 21396066 - 21395883
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| || ||||| ||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  21396066 cagcttagttaaataacaaacaacaacataggcagtatacaa-cagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21395968  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 185  Q
    ||||||||||||||||| ||||||| ||| |||||||||  ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  21395967 cttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttctt 21395883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 21790559 - 21790376
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| || ||||| ||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  21790559 cagcttagttaaataacaaacaacaacataggcagtatacaa-cagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21790461  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 185  Q
    ||||||||||||||||| ||||||| ||| |||||||||  ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  21790460 cttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttctt 21790376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 21389536 - 21389358
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||||| | ||| ||| || ||||||||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  21389536 cagcttagttaaataacaaacaacaacataggtagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21389438  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaac 180  Q
    ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||||| |||| |||||||    
T  21389437 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaac 21389358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 21778862 - 21778697
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||||| | ||| ||| || ||||||||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  21778862 cagcttagttaaataacaaacaacaacataggtagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 21778764  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcaca 167  Q
    ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| ||||||||||    
T  21778763 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18818495 - 18818273
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| ||||  || ||| || ||||||| |||| ||| ||    
T  18818495 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaatta 18818397  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  18818396 tacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctta 18818297  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||  ||||||||||    
T  18818296 atactaccctaaatttcaactctc 18818273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 21924014 - 21923792
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| | | ||||  ||||||||||| ||||||| |||| ||| ||| |||||||||| |||| ||| ||    
T  21924014 cagcttagttaaataacaa-cagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaatta 21923916  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | | |||| |  ||||||||||| |||||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  21923915 tacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcatcattaagtctta 21923816  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||  ||||||||||||||    
T  21923815 atactacctcaaggttcaactctc 21923792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 28649130 - 28648908
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||||||||||| ||||||||||||| ||| |  ||||| |||||||||||||||| || | ||| ||| ||||||||||  ||||||   |    
T  28649130 cagcttagttaaataacaaa-agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacattca 28649032  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  |||||||||||  || | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || ||||||||||| |    
T  28649031 taattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtctca 28648932  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||||||||    
T  28648931 atactaccccaaggttcaactctc 28648908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 25363123 - 25363004
Alignment:
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||||  ||||||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| |    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatac 25363024  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||||||||||||||||||    
T  25363023 tacccaaaggttcaactctc 25363004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 42 - 221
Target Start/End: Original strand, 23648630 - 23648810
Alignment:
Q  42 aacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcat 140  Q
    ||||||||||||||||||||| | || |||| || |||||||||| |||| |||  |  |||||||||||||| | | |||||||||||||||||||||     
T  23648630 aacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatcaa 23648729  T
Q  141 caacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    || ||||| |||||| ||||||| |||||||||||||||| || |||||| |||||||| || ||| ||||||||||||||    
T  23648730 catcaacacatcttaaacagcttaacagattataattaacatcatcattaggtcttaatactaccccaaggttcaactctc 23648810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 7372813 - 7373001
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  7372813 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 7372911  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtct 195  Q
    | |||||||||||||       |||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||||    
T  7372912 tacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtct 7373001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 23406414 - 23406611
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaa--catcttagatatacaaa 96  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| |||| ||| ||| ||   ||||||| |||| |||     
T  23406414 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacatatcatcttaaatattcaat 23406512  T
Q  97 tattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtc 194  Q
    ||| |||||||||||||| | | |||||||||||| |||| ||| || ||||| |||||| ||| ||||||| |||||||||||| || ||||||||||    
T  23406513 tatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaacatcctcattaagtc 23406611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6759293 - 6759512
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||||  ||||||||||||||||||| || | ||| |||   |||||| |  ||||||   |    
T  6759293 cagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaagtca---acatctcaattatacactca 6759388  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttata-cagcttcacagattataattaacctcttcattaagtctt 196  Q
    |  ||||| |||||| || | ||||||||||||||||||||| || ||||| |||||| | ||||||||||||||||||||||| || |||||||||||     
T  6759389 taattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagtctc 6759488  T
Q  197 aatgctgcccaaaggttcaactct 220  Q
    ||| || ||| |||||||||||||    
T  6759489 aatactaccccaaggttcaactct 6759512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22875100 - 22875321
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||| ||  |||||||| ||||| ||| |||| ||||||||||||||||||| || | ||| ||| |||||||| | |||||||   ||    
T  22875100 cagcttagttaaatagcag-cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcat 22875198  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttata-cagcttcacagattataattaacctcttcattaagtctta 197  Q
      |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| | ||||||||||||||||||||||| ||  |||||  ||| |    
T  22875199 aattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcaccattacatctca 22875298  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||| |||||||||||||    
T  22875299 atactaccccaaggttcaactct 22875321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16092428 - 16092206
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||||  || |||||||||||||||| || | ||| ||| |||||||| | |||||||   |    
T  16092428 cagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattca 16092330  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatctt-atacagcttcacagattataattaacctcttcattaagtctt 196  Q
    |  || ||||||||| || | ||||||||||||||||||||| || ||||| ||||| | ||| |||| || |||||||||||| || || ||||||||     
T  16092329 taatttaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatcatccttaagtctc 16092230  T
Q  197 aatgctgcccaaaggttcaactct 220  Q
    |||  | ||| |||||||||||||    
T  16092229 aatattaccccaaggttcaactct 16092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5866360 - 5866298
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  5866360 cagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 5866298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17140951 - 17141013
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaa-acaacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||  || ||||||||||||||||    
T  17140951 cagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatat 17141013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21491030 - 21491092
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  21491030 cagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 21491092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6520403 - 6520486
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatc 83  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| |||| |||||  | | ||| |||||||||||    
T  6520403 cagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 6520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13508171 - 13508109
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattca-aacaacatgacataataatat 62  Q
    |||||||||||| |||||| |||||||||||||||||| || |||| ||||| ||||||||||    
T  13508171 cagcttagttaattaacaatcagcaacataggcaatatgcacaacatcatgatataataatat 13508109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38855337 - 38855295
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  38855337 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 38855295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 983492 - 983447
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa 46  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||    
T  983492 cagcttagttaaataacaatcagcaacataggcagtatgcaaacaa 983447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23760930 - 23760897
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  23760930 cagcttagttaaataacaaacagcaacataggca 23760897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21285632 - 21285716
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||| ||||||||||||||| ||||||||||| ||| | ||||||||||| |||| ||||| || | ||| ||| ||||||||    
T  21285632 cagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 21285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 32102 - 32322
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32102 cagcttagttaaataacaa-cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatatt 32200  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||     
T  32201 cttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatc 32300  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  32301 ctacccaagggttcaactctcg 32322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 40443426 - 40443647
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||||||||||| ||| ||  |||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  40443426 cagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatatt 40443525  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||     
T  40443526 cttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaatc 40443625  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||| ||||||    
T  40443626 ctacccaagggttcatctctcg 40443647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 10589074 - 10589294
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||| ||| ||| ||||  |||||||||||||| |||| |||| ||||||| |||||||||  || | ||||||    
T  10589074 cagcttagttaaataacaa-cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttcaaata 10589172  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  10589173 ttcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaacctcatcattaagtcttaa 10589272  T
Q  199 tgctgcccaaaggttcaactct 220  Q
    | || ||||||||| |||||||    
T  10589273 tcctacccaaaggtccaactct 10589294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 9509224 - 9509447
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaa--acaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| ||| |||||||||| ||| |||  ||| |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  9509224 cagcttagttaaataacaa-cagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 9509322  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||| | | || |||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  9509323 ttcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctta 9509422  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    |||||  || |||||||||||||||    
T  9509423 atgctatcccaaggttcaactctcg 9509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 26212034 - 26212245
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattc 101  Q
    |||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||||||| |||||||||| |||| |||||| |     
T  26212034 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataatt 26212132  T
Q  102 ttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
     |||||||||||||||  ||||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26212133 ctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatg 26212232  T
Q  201 ctgcccaaaggtt 213  Q
    || ||||||||||    
T  26212233 ctacccaaaggtt 26212245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27847916 - 27847696
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||| ||||||||||||||||| | | ||| ||  |||||||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  27847916 cagcttagttaaataataaacagcaacataggcagtgtacaa-cagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 27847818  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||| | |||||||||||||     
T  27847817 cttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaatctcattattaagtcttaatc 27847718  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  27847717 ctacccaagggttcaactctcg 27847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12698866 - 12699086
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa---caacatgacataataatataaatttcaattcatcaacatcttagatatacaaat 97  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||   || |||||||||||||||| |||| |||||||||||||||||| |||| |||||    
T  12698866 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaat 12698964  T
Q  98 attcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctt 196  Q
    ||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||| ||||    
T  12698965 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaactctt 12699064  T
Q  197 aatgctgcccaaaggttcaact 218  Q
    ||| || ||| |||||||||||    
T  12699065 aatactaccccaaggttcaact 12699086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16386334 - 16386112
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||||||||||||| | ||||||||| ||| ||||  || ||||||||||  |||| ||||  | ||||||||||||||| |||| |||| |    
T  16386334 cagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattcaaaca 16386235  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |  |||||||||||||||  |||||||| |||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  16386234 attctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctcttcattaagtctta 16386135  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    ||| | |||||||||||||||||    
T  16386134 atgttacccaaaggttcaactct 16386112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 38227516 - 38227736
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||||||  ||||||||||||| ||| |||| || |||||||||||||||| || | ||| ||| |||||||||| |||| ||| |||    
T  38227516 cagcttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattat 38227614  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||||| ||||| | | |||||||||||||||| |||||| || |||||||||||| | | ||||||| |||||||||||| || ||||||||||||||    
T  38227615 acttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatcattaagtcttaa 38227714  T
Q  199 tgctgcccaaaggttcaactct 220  Q
    | || ||| |||||||||||||    
T  38227715 tactaccccaaggttcaactct 38227736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 18456498 - 18456319
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||| |  ||||||||||||| ||| |||| ||||||||||||||||||| || | ||| ||| |||||||||| |||| ||| |||    
T  18456498 cagcttagttaaataacgat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattat 18456400  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaa 179  Q
     |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||    
T  18456399 acttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 3564450 - 3564229
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| || |  || ||| |||||||| |  ||||||   |    
T  3564450 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatacattca 3564352  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  |||||||||||| || | ||||| ||||||||||||||| || ||||| |||||| ||| ||||| || ||||||||||| || ||||||||||| |    
T  3564351 taattcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcatcattaagtctca 3564252  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||| |||||| ||||||    
T  3564251 atactaccccaaggttaaactct 3564229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 2530205 - 2530126
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||  |||| ||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaata 2530126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 12187115 - 12187218
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  |||||||| ||| |   ||||| |||||| |||||||||    
T  12187115 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctcttat-cagcttcac 12187213  T
Q  167 agatt 171  Q
    |||||    
T  12187214 agatt 12187218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 17138081 - 17137978
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  |||||||| ||| ||  ||||| || ||| |||||||||    
T  17138081 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcatat-cagcttcac 17137983  T
Q  167 agatt 171  Q
    |||||    
T  17137982 agatt 17137978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 16056366 - 16056446
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||| |||| ||||| || | ||| ||| ||||||||    
T  16056366 cttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 16056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28505384 - 28505322
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  28505384 cagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 28505322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34200821 - 34200883
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  34200821 cagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 34200883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 16213716 - 16213852
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||||||||| | ||| ||| |  |||||||||||||||||||||| || | ||| ||| |||| |||||  ||| || |||    
T  16213716 cagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaaatccaagtcaacaacgtcttaattattcacata 16213813  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataa 136  Q
    |  ||||||||||||||| || ||||||||||| |||||    
T  16213814 taattcaagtaatgcatatataattatatcacaacataa 16213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 67780 - 67822
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  67780 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 67822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13647360 - 13647476
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||||||||||||||| ||| |  ||||| |||||||||||||||| || | ||| ||| |||| ||| |  ||| || |||    
T  13647360 cagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacata 13647458  T
Q  99 ttcttcaagtaatgcata 116  Q
    |  |||||||||||||||    
T  13647459 taattcaagtaatgcata 13647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16495437 - 16495499
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||| ||||||||||| ||| |||| || ||||| ||||||||||    
T  16495437 cagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatat 16495499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 16219802 - 16219717
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatctta 86  Q
    ||||||||||||||||||||| ||||||||||| ||| |||| || ||||| |||| |||||  | | ||| ||||||||||||||    
T  16219802 agcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2280205 - 2280033
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||  |||||||| ||||||||||| ||| | ||||| ||||| |||||||||| || | ||| ||| |||||||| | |||| || ||||    
T  2280205 cagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatctcaaatattcatatat 2280106  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttat-acagcttcacagat 170  Q
      ||||| |||| |||| |  |||||||||||| |||| || || |||   ||||||| ||||||||||||||    
T  2280105 aattcaaataatacatataaaattatatcacattataaacaacatcaaatcatcttataacagcttcacagat 2280033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 811217 - 811175
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||    
T  811217 cagcttagttaaataacaaatagcaacataggcagtatgcaaa 811175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22072948 - 22072990
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  22072948 cagcttagttaaataacaaacaacaacataggcactatgcaaa 22072990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44014213 - 44014255
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  44014213 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 44014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48273424 - 48273508
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatct 84  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||||  || |||||||||||||||| || | ||| ||| ||||||||    
T  48273424 cagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 18005681 - 18005710
Alignment:
Q  1 cagcttagttaaataacaaacagcaacata 30  Q
    ||||||||||||||||||||||||||||||    
T  18005681 cagcttagttaaataacaaacagcaacata 18005710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 10509 - 10289
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||| ||||||| ||||||||||||||||||||| ||| ||| || |||||||||||||||| |||||||||||| ||||||||||  ||||||||||||    
T  10509 cagcatagttaattaacaaacagcaacataggcagtatacaa-cagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaatatt 10411  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||     
T  10410 cttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataattaaccttattattaagtcttaatt 10311  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  10310 ctacccaagggttcaactctcg 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13532 - 13753
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||| ||||||| |||||| ||||||||||||||||  |||||||| ||    
T  13532 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtatacaaacat 13630  T
Q  100 tcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  13631 tcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaacctcattgttaagtcttaat 13730  T
Q  200 gctgcccaaaggttcaactctcg 222  Q
     || || ||||||||||||||||    
T  13731 cctaccgaaaggttcaactctcg 13753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 139; Significance: 7e-73; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 15549 - 15328
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||||||  ||||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||    
T  15549 cagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaaaatat 15451  T
Q  100 tcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  15450 tcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaaccttattattaagtcttaat 15351  T
Q  200 gctgcccaaaggttcaactctcg 222  Q
     || ||||| |  ||||||||||    
T  15350 cctacccaacgagtcaactctcg 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 7391 - 7459
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcata 135  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  ||||||||    
T  7391 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcata 7459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 12902792 - 12903014
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| ||||  ||||||||||||||||| |||| ||||||    
T  12902792 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaaata 12902890  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    || ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12902891 ttattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtctta 12902990  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||||||||||||||||||    
T  12902991 atcctacccaaaggttcaactctc 12903014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 14053384 - 14053165
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacat-cttagatatacaaatattct 102  Q
    ||||||||||||||||||| || ||||| || ||| |||||| |||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||    
T  14053384 cttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcatacaaatattct 14053285  T
Q  103 tcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgct 202  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||||||||||| ||    
T  14053284 tcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagattataattaacctcattgttaagtcttaatcct 14053185  T
Q  203 gcccaaaggttcaactctcg 222  Q
     ||||| |||||||||||||    
T  14053184 acccaagggttcaactctcg 14053165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7088912 - 7089135
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  7088912 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattcaaata 7089010  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    || ||||||||||||||||  ||||||||||||||||||| | |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  7089011 ttattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctcttcattaagtctta 7089110  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    ||||| | |||||||||||||||||    
T  7089111 atgctactcaaaggttcaactctcg 7089135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 17046522 - 17046719
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||||||||||||| | |||  || |||||||||||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  17046522 cagcttagttaaataacaaacagcaacataggtagtatagaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 17046620  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||| |||| ||||||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||  | |||||||||||||    
T  17046621 cttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagattataattaaccttattattaagtcttaat 17046719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 44052864 - 44053087
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||| ||||||||||||| || ||||||||||| ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  44052864 cagctcagttaaataacaa-catcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 44052962  T
Q  99 ttcttcaagtaatgc--ataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctt 196  Q
    |||||||||||||||  |||| ||||||||||||||||||||| || || || |||||| |||||||||||||||||||||||| || ||||||||||||    
T  44052963 ttcttcaagtaatgctcataa-cattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattataattaacatcatcattaagtctt 44053061  T
Q  197 aatgctgcccaaaggttcaactctcg 222  Q
    ||||||  || |||||||||||||||    
T  44053062 aatgctatcccaaggttcaactctcg 44053087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 23374445 - 23374231
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || ||||||||||  |||| |||| ||||||| |||||||||| |||| ||||||    
T  23374445 cagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaata 23374347  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| | ||||||| |||||||| ||||||||||||||||||||||    
T  23374346 attctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattatagttaacctcttcattaagtctta 23374247  T
Q  198 atgctgcccaaaggtt 213  Q
    ||||| ||||||||||    
T  23374246 atgctacccaaaggtt 23374231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22636470 - 22636691
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||| |||||||| || | | |  ||||| |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  22636470 cagcttagttaaataac-aacaacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 22636568  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||||| | ||||||||||||||||||||  || ||||| |||||| |||||||||||||||||||||||| || || ||||||||||    
T  22636569 ttcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctta-acagcttcacagattataattaacatcctcgttaagtctta 22636667  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||| ||||    
T  22636668 atactaccccaaggttcaattctc 22636691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 16377607 - 16377387
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||| || | ||| ||| |||||||| |  ||||||   ||     
T  16377607 cagcttagttaaataacaa-cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcata 16377509  T
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
     |||||||||||| || | ||||||||||||||||||||| || ||||  |||||| |||||| ||||||||||||||||| || ||||||||||| |||    
T  16377508 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatcattaagtctcaat 16377409  T
Q  200 gctgcccaaaggttcaactctc 221  Q
     || ||| ||||||||||||||    
T  16377408 actaccccaaggttcaactctc 16377387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 3096767 - 3096901
Alignment:
Q  88 atatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttca 187  Q
    |||| ||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| |||    
T  3096767 atattcaaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatca 3096866  T
Q  188 ttaagtcttaatgctgcccaaaggttcaactctcg 222  Q
    |||||| || || || |||||||||||||||||||    
T  3096867 ttaagtatttatcctacccaaaggttcaactctcg 3096901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7893738 - 7893958
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||  || |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  7893738 cagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 7893836  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | |||||| |||||||||||||| |||||    |||||| |||||||||||||||||||||||| || || ||||||||||    
T  7893837 tacttcaagtaatgcacataccattatttcacatcataatcagcaacac---atcttaaacagcttcacagattataattaacatcatcgttaagtctta 7893933  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    ||  | ||| |||||||||||||||    
T  7893934 atattaccccaaggttcaactctcg 7893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 16240052 - 16239834
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    |||| |||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||| || | ||| ||| |||||||||| |||| ||| ||| ||    
T  16240052 cttaattaaataacaat-agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatact 16239954  T
Q  103 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    | |||||||||| | | |||||||||| |||||||||| || ||||| |||||| |||||||| ||||||||||||||| || ||||||||||||||| |    
T  16239953 ttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattataattaacatcatcattaagtcttaatac 16239854  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||| || |||||||||||    
T  16239853 taccccaaagttcaactctc 16239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 17048055 - 17047936
Alignment:
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||| || ||||||  ||||||||||||||||||| |    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatac 17047956  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||||||||||||||||||    
T  17047955 tacccaaaggttcaactctc 17047936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16270321 - 16270145
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||| |||||||||||  ||||||||||||| ||| |||| || |||||||||||||||| || | ||| | | |||||||||| |||| ||| |||    
T  16270321 cagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattat 16270223  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataat 176  Q
     |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  16270222 acttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 16270145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14038683 - 14038904
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| | ||| ||| ||||  ||||||| ||||||||||| || | ||| ||| |||||||| |  ||||||   |    
T  14038683 cagcttagttaaataacaa-cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatacattca 14038781  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  ||||||||||||| | | ||||||||||||||||||||| || ||||| || ||| |||||||||||||||||||||||  || ||||||||||| |    
T  14038782 tatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcattaagtctca 14038881  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||| |||||||||||||    
T  14038882 atactaccccaaggttcaactct 14038904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 7798809 - 7798958
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||| |||||||||||||| |||| ||| ||    
T  7798809 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaatta 7798907  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaaca 148  Q
    | |||||||||||||| | | |||| ||||||| |||||||| || |||||    
T  7798908 tacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 43256227 - 43256106
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata-ttcttcaagtaatgcata- 116  Q
    ||||||||||||||||  || | ||||||||||||||||||||| |||||||||||| |||||||||  |||| |||||| ||||| ||||||||||||     
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcatat 43256129  T
Q  117 atcattatatcacatcataatca 139  Q
    |  |||||||||||| |||||||    
T  43256128 aatattatatcacattataatca 43256106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 6899929 - 6900062
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    ||||||||||||||||  ||||||||||||| ||| |||| ||||||  ||||||||||| || | ||| ||| |||||||||| |||| ||| ||| ||    
T  6899929 cttagttaaataacaat-agcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtcaacaacatcttaaatattcaattatact 6900027  T
Q  103 tcaagtaatg--cataatcattatatcacatcataa 136  Q
    ||||||||||  ||||| ||||||||||||||||||    
T  6900028 tcaagtaatgtacataa-cattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 15121821 - 15121749
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 139  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  15121821 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatca 15121749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13937 - 13800
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||||||||| |||| ||||| || | ||| |||||||||||| | |||| || ||||    
T  13937 cagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatat 13838  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataa 136  Q
      ||||||||||| ||| |  |||||||||||| ||||    
T  13837 aattcaagtaatgtatatacaattatatcacattataa 13800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 15091093 - 15091152
Alignment:
Q  161 cttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 220  Q
    |||||||||||||||||||| |||||||||||||| ||| || ||| |||||||||||||    
T  15091093 cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactct 15091152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52873453 - 52873367
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatctta 86  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||| ||| || |||||||    
T  52873453 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12288296 - 12288253
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaac 44  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  12288296 cagcttagttaaataacaaacagcaacataggcagtatgcaaac 12288253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8846391 - 8846433
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  8846391 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 8846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12774042 - 12774084
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  12774042 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 12774084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15551852 - 15551914
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaa-acaacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||  || ||||| ||||||||||    
T  15551852 cagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgatataataatat 15551914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43198641 - 43198599
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  43198641 cagcttagttaaataacaaacagcaacatagacaatatgcaaa 43198599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52243282 - 52243240
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  52243282 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 52243240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 16596686 - 16596745
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    ||||||||||||||||||||||||||||| | ||| |||| || ||||| ||||||||||    
T  16596686 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatat 16596745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39706374 - 39706332
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  39706374 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 39706332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 38200 - 37979
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| || |||||||||||||||| |||||| |||||||| |||||||  |||||||| ||    
T  38200 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtatacaaacat 38102  T
Q  100 tcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  38101 tcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataattaacctcattgttaagtcttaat 38002  T
Q  200 gctgcccaaaggttcaactctcg 222  Q
     || |||||||||||||||||||    
T  38001 cctacccaaaggttcaactctcg 37979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 20309143 - 20309363
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||| ||||||||||||| ||| ||| || ||||||||||| |||| || ||||||||||||||||||||  ||||||||||||    
T  20309143 cagcttagttaaataacaaatagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaatatt 20309241  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |  ||||||||||||     
T  20309242 cttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattcttaagtcttaatc 20309341  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  20309342 ctacccaagggttcaactctcg 20309363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23285900 - 23286118
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| |||| ||||||||||||| |||| |||||||||||||||||| |||| ||||| ||    
T  23285900 cagcttagttaaataacaa-cagcaacataggcagtatacaaa-aaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaatgtt 23285996  T
Q  101 cttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  23285997 cttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcttcattaagtcttaat 23286096  T
Q  200 gctgcccaaaggttcaactctc 221  Q
     || ||||||||||||||||||    
T  23286097 actacccaaaggttcaactctc 23286118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 23654472 - 23654249
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || || ||||||||  || ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||| ||    
T  23654472 cagcttagttaaataacaa-caacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattcaagta 23654374  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    ||  |||||||||||||||  ||||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23654373 ttactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtctta 23654274  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    ||||| |||||||||||||||||||    
T  23654273 atgctacccaaaggttcaactctcg 23654249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 298901 - 298686
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||  |||| |||| ||||||| |||||||||| |||| ||||||    
T  298901 cagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaata 298802  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |  |||||||||||||||  ||||||||||||||||||| |  ||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  298801 attctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatattatagttaacctcttcattaagtctta 298702  T
Q  198 atgctgcccaaaggtt 213  Q
    ||||| ||||||||||    
T  298701 atgctacccaaaggtt 298686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22731320 - 22731120
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| | | ||||  || |||||||||||||||| |||| |||||||||||||| ||| |||| ||||||    
T  22731320 cagcttagttaaataacaa-cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaaata 22731222  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  22731221 ttcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctta 22731122  T
Q  198 at 199  Q
    ||    
T  22731121 at 22731120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 41 - 221
Target Start/End: Complemental strand, 22738225 - 22738044
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca 139  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||| | | |||||||||||||||||||||    
T  22738225 aaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatca 22738126  T
Q  140 tcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
     || ||||| |||||| |||||||||||||||||||||||| || ||||||||||||||| || ||| ||||||||| ||||    
T  22738125 acatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaattctc 22738044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 23060548 - 23060742
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| |||| ||| ||| |||||||||| ||||  || ||    
T  23060548 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaatta 23060646  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtc 194  Q
    | |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || ||||||||||    
T  23060647 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcatcattaagtc 23060742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23076477 - 23076699
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||| ||| ||| |||||| |||| ||| ||    
T  23076477 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaatta 23076575  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | ||||||||||||||||||||| || ||||| | |||| |||||||||||||||||||||||| || |||| || ||  |    
T  23076576 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaacatcatcataaaatccca 23076675  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| || |||||||||||    
T  23076676 atactaccccaaagttcaactctc 23076699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22337150 - 22337372
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca--atattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| ||||   ||||  ||||| |||||||||||||||| || | |||  || |||||||| | |||||||   |    
T  22337150 cagcttagttaaataacaa-cagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatacattca 22337248  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  |||||||||||| || | ||||||||||||||||||||| || |||||||||||| ||| ||||||| |||||||||||| || |||||||||||||    
T  22337249 taattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcatcattaagtctta 22337348  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || | | ||||||||||||||    
T  22337349 atactactccaaggttcaactctc 22337372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 23660061 - 23660279
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    |||||||||| ||||| |||||||||||||| ||| | |||||  ||||||||||||||| || | ||| ||| |||||||||| |||| |||  ||       
T  23660061 cttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataac 23660159  T
Q  103 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    ||||||||||| || | ||||||||||||||||||||| || ||||| |||||| ||||||| ||| |||||||||||| || ||| ||||||| ||| |    
T  23660160 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattataattaacatcatcaataagtctcaatac 23660259  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||| ||||||||||||||    
T  23660260 taccccaaggttcaactctc 23660279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 27753728 - 27753833
Alignment:
Q  117 atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaa 216  Q
    ||||||||||||||||||||||| || ||||| |||||| |||| |||||| |||||||||||| || ||||||||||||||||||  || ||| |||||    
T  27753728 atcattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaa 27753827  T
Q  217 ctctcg 222  Q
    ||||||    
T  27753828 ctctcg 27753833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23708705 - 23708524
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||||| | ||||||||||||| ||| |||| |||||||| |||| ||||| |||| ||| ||||| |||||| | | || |||||||    
T  23708705 cagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaatat 23708606  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttat-acagcttcacagattataattaa 179  Q
      ||||||||||||||| |  |||||||||||| |||| || || |||   ||||||| |||||||||||||| || |||||    
T  23708605 aattcaagtaatgcatatacaattatatcacattataaacaacatcaattcatcttataacagcttcacagatcatcattaa 23708524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23103481 - 23103399
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| |||||||| || |||| || ||||||||||||||||||    
T  23103481 cagcttagttaaataa-aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatct 23103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 40622231 - 40622123
Alignment:
Q  67 ttcaattcatcaacatcttagata-----tacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagc 161  Q
    ||||||||||||||||||||  ||     ||||||||||||||||||||||||||| |||||||  |||||||||||| ||  ||||| || || |||||    
T  40622231 ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctcata-acagc 40622133  T
Q  162 ttcacagatt 171  Q
    ||||||||||    
T  40622132 ttcacagatt 40622123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7819 - 7735
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||||||||| |||| ||||| || | ||| ||||||||||||    
T  7819 cagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7679620 - 7679702
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatc 83  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| |||| ||||| ||| | || |||||||||||    
T  7679620 cagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcaatgt-aagtcatcaacatc 7679702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22105444 - 22105560
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||||||||||||||| ||| |  ||||| |||||||||||||||| || | ||| ||| |||| ||| |  ||| || |||    
T  22105444 cagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacttctcaattattcacata 22105542  T
Q  99 ttcttcaagtaatgcata 116  Q
    |  |||||||||||||||    
T  22105543 taattcaagtaatgcata 22105560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25175885 - 25175927
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  25175885 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 25175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 28406014 - 28406053
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  28406014 cttagttaaataacaaacagcaacataggcagtatgcaaa 28406053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19671865 - 19671927
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatat 62  Q
    |||||||||||| |||||| |||||||||||||| ||| | ||||| ||||| ||||||||||    
T  19671865 cagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatat 19671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23072035 - 23071973
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||| || ||||| ||||||||||    
T  23072035 cagcttagttaaataacgaacaacaacataggcagtatgcaaaccatcatgatataataatat 23071973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 6e-70; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27250815 - 27250592
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  27250815 cagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 27250717  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    || ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |    
T  27250716 ttattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctcttcattaagtatca 27250617  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    ||||| |||||||||||||||||||    
T  27250616 atgctacccaaaggttcaactctcg 27250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 38801474 - 38801258
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||||||||||||||| | | ||| || || |||||||| |||| || |||||||||||||||| ||| |||||||| ||||    
T  38801474 cagcttagttaaataacaaacagcaacataggcagtgtgcaa-cagcaagacataattatatcaaattcaattcatcaacatattatatatacaattatt 38801376  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||| |||||||||| |||||| |||| ||| | |||||||||||||     
T  38801375 cttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaattatagttaatctcattattaagtcttaatc 38801276  T
Q  201 ctgcccaaaggttcaact 218  Q
    || ||||| |||||||||    
T  38801275 ctacccaagggttcaact 38801258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21026715 - 21026929
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||||  || |||||| |||  |||| |||| ||||||| |||||||||| |||| ||||||    
T  21026715 cagcttagttaaataacaa-cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattcaaata 21026813  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |  |||||||||||||||  ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  21026814 attctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctcttcattaagtctta 21026913  T
Q  198 atgctgcccaaaggtt 213  Q
    ||||| ||||||||||    
T  21026914 atgctacccaaaggtt 21026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 42 - 221
Target Start/End: Complemental strand, 22354616 - 22354436
Alignment:
Q  42 aacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcat 140  Q
    |||| |||||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||||| ||| | |||||||||||||||||||||     
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  141 caacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    || ||||| |||||| |||||||||||||||||||||||| || ||||||||||||||| || || |||||||||| ||||    
T  22354516 catcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaattctc 22354436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 50210299 - 50210077
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| || | ||| ||| |||||||| |  ||||||   |    
T  50210299 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattca 50210201  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  |||||||||||| |  | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||| |    
T  50210200 taattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctca 50210101  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||||||||||||||||||    
T  50210100 atactacccaaaggttcaactctc 50210077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 22356185 - 22356037
Alignment:
Q  76 tcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca-tcaacaacatatcttatacagcttcacagattat 173  Q
    |||||||| || |||| |||| ||||||||||||||||| | | ||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||    
T  22356185 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22356086  T
Q  174 aattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 222  Q
    ||||||| || ||||||||||||||||||  || |||||||||||||||    
T  22356085 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcg 22356037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 22357871 - 22357723
Alignment:
Q  76 tcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca-tcaacaacatatcttatacagcttcacagattat 173  Q
    |||||||| || |||| |||| ||||||||||||||||| | | ||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||    
T  22357871 tcaacatcataaatattcaaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattat 22357772  T
Q  174 aattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 222  Q
    ||||||| || ||||||||||||||||||  || |||||||||||||||    
T  22357771 aattaacatcatcattaagtcttaatgctatcccaaggttcaactctcg 22357723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 22532308 - 22532526
Alignment:
Q  5 ttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    ||||||||||||||| |||||||||||||| ||| ||||  || ||||||||||||||||  ||| ||||||| |||||||||| |||| ||   ||  |    
T  22532308 ttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataat 22532406  T
Q  103 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||| | |||| |||| || ||||||||||| ||| |    
T  22532407 tcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcatcattaagtctcaatac 22532506  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||  ||||||||||||||    
T  22532507 tacctcaaggttcaactctc 22532526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34509815 - 34510033
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || ||||||||||| |||| || | ||| ||| ||||||||||  ||||||   |    
T  34509815 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattca 34509913  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |   ||||||||||| || | ||||||||||||||||| ||| || ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| |    
T  34509914 tatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattataattaacatcatcattaagtctca 34510013  T
Q  198 atgctgcccaaaggttcaac 217  Q
    || || ||| ||||||||||    
T  34510014 atactaccccaaggttcaac 34510033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 221
Target Start/End: Original strand, 20135264 - 20135444
Alignment:
Q  42 aacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcat 140  Q
    |||| |||||||||||||||| |  | ||||||| ||||||||||  ||| |||  |  |||||||||||||||| | |||||||||| |||||||| |     
T  20135264 aacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatgaa 20135363  T
Q  141 caacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    || ||||| |||||| ||||||||||||||||||||||||  | |||||| |||||| | || ||| ||||||||||||||    
T  20135364 catcaacacatcttaaacagcttcacagattataattaacaacatcattaggtcttactactaccctaaggttcaactctc 20135444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 48603652 - 48603735
Alignment:
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 185  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||    
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttctt 48603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 33797573 - 33797694
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaat-attcttcaagtaatgcat-a 116  Q
    |||||||||||| |||  || ||||||||||||||||||||||| |||||||||||| |||||||||  |||| ||||| |||||| ||||||||||| |    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 33797671  T
Q  117 atcattatatcacatcataatca 139  Q
    | ||||||||||||| |||||||    
T  33797672 aacattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 22468779 - 22468604
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaa--acaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattc 101  Q
    ||||||||||||||||  |||||||||||||   | |||  ||| |||||||| ||||||| |||| ||||||| ||||||||||  ||| |||  ||      
T  22468779 cttagttaaataacaat-agcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattcaataatat 22468681  T
Q  102 ttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataatta 178  Q
     |||||||||||| | | ||||||||||||||||||| | || || || |||||| ||||||||||||||||||||||    
T  22468680 ctcaagtaatgcacataacattatatcacatcataatta-catcagcacatcttaaacagcttcacagattataatta 22468604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 20847147 - 20847091
Alignment:
Q  157 acagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggtt 213  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||    
T  20847147 acagcttcatagattatggttaacctcttcattaagtcttaatgctacccaaaggtt 20847091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14295637 - 14295575
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||| | ||| |||| || ||||| ||||||||||    
T  14295637 cagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatat 14295575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20918639 - 20918701
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    ||||||||||||||||||||| |||||||||||| ||| |||| || ||||| ||||||||||    
T  20918639 cagcttagttaaataacaaactgcaacataggcagtatgcaaaccatcatgatataataatat 20918701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 16758687 - 16758727
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaac 44  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  16758687 cttagttaaataacaaacagcaacataggcagtatgcaaac 16758727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 22237663 - 22237746
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatct 84  Q
    ||||||||||||||||||||||| ||||||||| ||| |||| || ||||| |||| |||||  | | ||| ||||||||||||    
T  22237663 agcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22237746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 33681045 - 33681084
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  33681045 cttagttaaataacaaacagcaacataggcagtatgcaaa 33681084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45574973 - 45574912
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataata 61  Q
    ||||||||||||||||| |||||||||||||||| ||| |  ||||| |||||||||||||||    
T  45574973 cagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataata 45574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21754080 - 21754122
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  21754080 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 21754122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22921955 - 22921913
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  22921955 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 22921913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21861656 - 21861519
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||| |||  |||||||||||||||||||| ||| | ||||| ||||| |||| ||||| || | ||| |||||||||||| | | || || ||||    
T  21861656 cagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatat 21861557  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataa 136  Q
      ||||||||||| ||| |  |||||||||||| ||||    
T  21861556 aattcaagtaatgtatatacaattatatcacattataa 21861519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 21896339 - 21896258
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||  |||||||||||||||||||| ||| | ||||| ||||| |||| ||||| || | ||| ||||||||||||    
T  21896339 cttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1134 - 912
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa--catgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| |||| |   |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  1134 cagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 1036  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    || |||||||||||||||| ||||||||||||||||||||| | | |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  1035 ttattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtcttaa 936  T
Q  199 tgctgcccaaaggttcaactctcg 222  Q
    |||| |||||||||||||||||||    
T  935 tgctacccaaaggttcaactctcg 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 168064 - 167842
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa--catgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| |||| |   |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  168064 cagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 167966  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    || |||||||||||||||| ||||||||||||||||||||| | | |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  167965 ttattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctcttcattaagtcttaa 167866  T
Q  199 tgctgcccaaaggttcaactctcg 222  Q
    |||| |||||||||||||||||||    
T  167865 tgctacccaaaggttcaactctcg 167842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 51948 - 52170
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||  || |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  51948 cagcttagttaaataacaa-cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 52046  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | |||||||||||| |||||||  || ||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  52047 tacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctta 52146  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||||||||    
T  52147 atactaccccaaggttcaactctc 52170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21293055 - 21292836
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaat-ttcaa-ttcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||  ||||||||||||||| ||| ||||| |||||||||||||||| ||||||| ||    
T  21293055 cagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatacaatta 21292957  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  21292956 ttcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagattataattaacctcattattaagtcttaa 21292857  T
Q  199 tgctgcccaaaggttcaactc 219  Q
    | || ||||| ||| ||||||    
T  21292856 tcctacccaagggtccaactc 21292836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 22075054 - 22075268
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||| | ||| ||||  ||||||||||||||||||| |||| ||||||| |||||||||| |||| ||||||    
T  22075054 cagcttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 22075152  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22075153 attctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcttcattaagtctta 22075252  T
Q  198 atgctgcccaaaggtt 213  Q
    ||||| ||||||||||    
T  22075253 atgctacccaaaggtt 22075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 23390582 - 23390359
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| ||||||||||| || ||| ||||  ||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  23390582 cagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 23390484  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| | |||||||||||||||||||||| || |||||||||||||    
T  23390483 ttcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtctta 23390384  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    || ||  || |||||||||||||||    
T  23390383 atactatcccaaggttcaactctcg 23390359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8286929 - 8286706
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaaca---tgacataataatataaatttcaattcatcaacatcttagatatacaaat 97  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||   |||||||||||||| |||| |||||||||||||||||| |||  ||||     
T  8286929 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataatcaaac 8286831  T
Q  98 attcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctt 196  Q
    ||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||| | |||||||||| |||||||||||||||    
T  8286830 attcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacataatataattaacatcttcattaagtctt 8286731  T
Q  197 aatgctgcccaaaggttcaactctc 221  Q
    ||| || ||||||||||||||||||    
T  8286730 aatactacccaaaggttcaactctc 8286706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25421567 - 25421789
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||  ||||||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  25421567 cagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaatta 25421665  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | ||||||||||||||||||||| || ||||  |||||| |||||||||||||||||||||||| || ||||||||||| |    
T  25421666 tacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctca 25421765  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    ||||| ||| ||||||||||||||    
T  25421766 atgctaccccaaggttcaactctc 25421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 25431432 - 25431651
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattc 101  Q
    |||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| |||| ||| ||| |||||||||| || | ||| ||| |    
T  25431432 cttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaattatac 25431530  T
Q  102 ttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||| | | ||||||||||||||||||||| || ||||  |||||| |||||||||||||||||||||||| || ||||||||||| ||||    
T  25431531 ttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaatg 25431630  T
Q  201 ctgcccaaaggttcaactctc 221  Q
    || ||  ||||||||||||||    
T  25431631 ctacctcaaggttcaactctc 25431651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24493604 - 24493825
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||| ||||| ||||||  ||||||||||||| ||| |||| || |||||||||||||||| || | ||| ||| |||||||||| |||| ||| |||    
T  24493604 cagcttggttaagtaacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattat 24493702  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||||||| ||||| | | ||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||| || | ||||||||||||    
T  24493703 acttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattataattaacatcattattaagtcttaa 24493802  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  24493803 tactaccccaaggttcaactctc 24493825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9077987 - 9078205
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| |  ||||| |||||||||||||||| || | ||| ||| |||||||| |  ||||||   |    
T  9077987 cagcttagttaaataacaa-cagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacattca 9078085  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |   ||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||| |    
T  9078086 taactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctca 9078185  T
Q  198 atgctgcccaaaggttcaac 217  Q
    || || ||| ||||||||||    
T  9078186 atactaccccaaggttcaac 9078205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 13025346 - 13025567
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||| ||||||||||||||  ||||||||||||| ||| |||| || ||||||||| | |||| || | ||| ||| |||||||||| |||| ||| |||    
T  13025346 cagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaattat 13025444  T
Q  100 tcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |||||| |||||  ||||| |||||||||||||| |||||| || |||||||||||| ||| ||||||| |||||||||||| || |||||||||||||    
T  13025445 acttcaaataatgtacataa-cattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtctta 13025543  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||||||||    
T  13025544 atactaccccaaggttcaactctc 13025567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 13095530 - 13095751
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||| ||||||||||||||  ||||||||||||| ||| |||| || ||||||||| | |||| || | ||| ||| |||||||||| |||| ||| |||    
T  13095530 cagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaattat 13095628  T
Q  100 tcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |||||| |||||  ||||| |||||||||||||| |||||| || |||||||||||| ||| ||||||| |||||||||||| || |||||||||||||    
T  13095629 acttcaaataatgtacataa-cattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtctta 13095727  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||||||||    
T  13095728 atactaccccaaggttcaactctc 13095751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 22107357 - 22107237
Alignment:
Q  102 ttcaagtaatgcataatc-attatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    |||||||||||||||||  |||||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||     
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaata 22107258  T
Q  201 ctgcccaaaggttcaactctc 221  Q
    || | |||||||||| |||||    
T  22107257 ctactcaaaggttcatctctc 22107237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24529255 - 24529477
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||  |||||||||||||| |||| || | ||| ||| ||||||||||  ||||||   |    
T  24529255 cagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattca 24529353  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |   ||||||||||| || | ||||||||||||||||| ||| || ||||| |||||| |||||||||||||||||| ||||| || ||||||||| | |    
T  24529354 tatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtttca 24529453  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||||||||    
T  24529454 atactaccccaaggttcaactctc 24529477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 1096502 - 1096721
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| ||| | ||| ||||  |||||| |||||||||||| || | ||| ||| |||||||| | |||||||   |    
T  1096502 cagcttagttaaataacaa-cagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatatacattca 1096600  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  ||||||||||||||| | ||||||||||||||||||||| || ||||  |||||| ||||||||| || ||||||||||| || ||||||||||| |    
T  1096601 taattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcctcattaagtctca 1096700  T
Q  198 atgctgcccaaaggttcaact 218  Q
    || || ||| ||||| |||||    
T  1096701 atactaccccaaggtccaact 1096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21808475 - 21808343
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||||||| |||||||||| |||| ||||||    
T  21808475 cagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 21808377  T
Q  99 ttcttcaagtaatgcat-aatcattatatcacat 131  Q
     |  ||||||||||||| || |||||||||||||    
T  21808376 attctcaagtaatgcataaaacattatatcacat 21808343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21729150 - 21729033
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||||||| |||||||||| |||| ||||||    
T  21729150 cagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 21729052  T
Q  99 ttcttcaagtaatgcataa 117  Q
     |  |||||||||||||||    
T  21729051 attctcaagtaatgcataa 21729033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 18356367 - 18356488
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcat-aa 117  Q
    ||||||||||||||||  || |||||| ||||| |||||||||| |||||||||||| |||||||||  |||| ||||||||  | ||||||||||| ||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcataaa 18356466  T
Q  118 tcattatatcacatcataatca 139  Q
     ||||||||||||| |||||||    
T  18356467 acattatatcacattataatca 18356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 20910866 - 20910745
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaat-attcttcaagtaatgcat-a 116  Q
    ||||||||||||| ||  || |||||| |||||||||||||||| |||||||||||| |||||||||  | || ||||| |||||| ||||||||||| |    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaacattcaaataattctt-aagtaatgcataa 20910768  T
Q  117 atcattatatcacatcataatca 139  Q
    | ||||||||||||| |||||||    
T  20910767 aacattatatcacattataatca 20910745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 18770022 - 18769919
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  |||||||| ||| ||  ||||| || ||| |||||||||    
T  18770022 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcatat-cagcttcac 18769924  T
Q  167 agatt 171  Q
    |||||    
T  18769923 agatt 18769919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 22032417 - 22032520
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  |||||||| ||| ||  ||||| || ||| |||||||||    
T  22032417 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgtat-cagcttcac 22032515  T
Q  167 agatt 171  Q
    |||||    
T  22032516 agatt 22032520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 23572180 - 23572252
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 139  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  23572180 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatca 23572252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 21986130 - 21986011
Alignment:
Q  103 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||| | |||| |||||| ||||| ||| || ||||| |||||| ||| ||||||| |||||| ||||| || |||| |||||| ||| |    
T  21986130 tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatac 21986031  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||| ||||||||||||||    
T  21986030 taccccaaggttcaactctc 21986011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37723938 - 37724020
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||| ||||||||||||||| ||| | |||| |||||||| || |||| || || |||||||||||||||    
T  37723938 cagcttagttaaataacagacagcaacataggcagtatac-aacagcatgacatgattatatcaaattaaattcatcaacatct 37724020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 18418633 - 18418793
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-a 117  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||| | || ||||||| |||||||||| |||| |||  |  |||||||||||| | | |    
T  18418633 aacatcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta-atattcaataaaacttcaagtaatgtacaca 18418730  T
Q  118 tcattatatcacatcataatcatcaacaacatatctt-atacagcttcacagattataattaa 179  Q
     |||||||||||||||||||||    ||| | ||||| | |||||||||||| ||||||||||    
T  18418731 acattatatcacatcataatcaatgtcaaaacatcttaaaacagcttcacaggttataattaa 18418793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21997620 - 21997558
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatat 62  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  |||||||||||||||||||    
T  21997620 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatat 21997558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22144084 - 22144200
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||||| ||| ||||||||| | ||| | ||||||||||| |||| ||||| |||| ||| ||| |||||||| | | || || ||||    
T  22144084 cagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatctcaaacattcatatat 22144183  T
Q  100 tcttcaagtaatgcata 116  Q
      |||||||||||||||    
T  22144184 aattcaagtaatgcata 22144200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19660921 - 19660878
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaac 44  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  19660921 cagcttagttaaataacaaacagcaacataggcagtatgcaaac 19660878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20027027 - 20026942
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa---catgacataataatataaatttcaattcatcaacatc 83  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  |   ||||| |||||||||| || | ||||||| |||||||    
T  20027027 cagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21329583 - 21329500
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatc 83  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||| | |||| |||||  | ||||| |||||||||||    
T  21329583 cagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatc 21329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 22412337 - 22412388
Alignment:
Q  128 acatcataatcatcaacaacatatcttatacagcttcacagattataattaa 179  Q
    |||||||||||| || ||||| |||||| |||||||||||||||||||||||    
T  22412337 acatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22959618 - 22959576
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  22959618 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 22959576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36314612 - 36314674
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||| | ||| |||| || ||||| ||||||||||    
T  36314612 cagcttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatat 36314674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21565577 - 21565619
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||    
T  21565577 cagcttagttaaataacaaatagcaacataggcagtatccaaa 21565619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26012121 - 26012059
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    ||||||||||||  |||||||||||||||||||| ||| |||| |||||||| |||| |||||    
T  26012121 cagcttagttaataaacaaacagcaacataggcagtatgcaaagcaacatgatataacaatat 26012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 6e-67; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 22831538 - 22831760
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagat--atacaaata 98  Q
    |||||||||||||||||||||||||||||||||| | ||||| | |||||||||||| |||| || |||||||||||||||||||||||  ||||||| |    
T  22831538 cagcttagttaaataacaaacagcaacataggcactgttcaa-cgacatgacataatcatatcaaattcaattcatcaacatcttagatgtatacaaaca 22831636  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |  | |||||||||    
T  22831637 ttcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaa 22831736  T
Q  199 tgctgcccaaaggttcaactctcg 222  Q
    | || ||||| |||||||||||||    
T  22831737 ttctacccaagggttcaactctcg 22831760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 20361046 - 20360829
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| ||||||||||||||  || ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  20361046 cagcttagttaaataacaa-cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 20360948  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  20360947 ttcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctcatcattaagtctta 20360848  T
Q  198 atgctgcccaaaggttcaa 216  Q
    || || |||||||||||||    
T  20360847 atactacccaaaggttcaa 20360829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16920716 - 16920496
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||||||||| |||||||| ||| ||| || ||||||||||  |||| || ||| ||||||||||||||||  ||||||||||||    
T  16920716 cagcttagttaaataacaaacagcagcataggcagtatacaa-catcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaatatt 16920618  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| |||||||| |||||||| |||||||| |  ||||||||||||     
T  16920617 cttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagattatagttaacctcattcttaagtcttaatt 16920518  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  16920517 ctacccaagggttcaactctcg 16920496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 20638369 - 20638146
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||  ||||||||||||||||||| |||| ||||| |||||||||||  |||| |||| |    
T  20638369 cagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaaaca 20638271  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||||||  | ||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  20638270 ttcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctta 20638171  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    ||| |  || |||||||||||||||    
T  20638170 atgttatcccaaggttcaactctcg 20638146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 35245621 - 35245758
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  35245621 cagcttagttaattaacaaacaccaacataggcagtatacaa-caacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatatt 35245719  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatca 139  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35245720 cttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11185540 - 11185746
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||  ||| | | | |||||||||||||||| |||| || |||||||||||| ||||||   |||||||| |||    
T  11185540 cagcttagttaaataacaaacaacaacatgtgcagtgtac-aacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaacatt 11185638  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| | ||||| ||| ||||||||| |||||||||||||||| || ||||||||||||   ||||||||   |||||||||||||     
T  11185639 cttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattacggttaacctcactattaagtcttaatc 11185738  T
Q  201 ctgcccaa 208  Q
    || |||||    
T  11185739 ctacccaa 11185746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 22780313 - 22780090
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||  || | |||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  22780313 cagcttagttaaataacaa-caaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 22780215  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | ||||||||||||||   | |||||||||||| |||||||| || ||||| |||||| ||||||||||||||||| |||||| || ||||||||||||     
T  22780214 tacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcattaagtcttt 22780115  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    || || ||| |||||||||||||||    
T  22780114 atactaccccaaggttcaactctcg 22780090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17287882 - 17287660
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa--catgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||| | ||| ||||||   |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  17287882 cagcttagttaaataacaa-cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 17287784  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | |||||| ||| | |||||||| |  ||||| |||||| |||||||||||| ||||||||||| || ||||||||||| |    
T  17287783 tacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcctcattaagtctca 17287684  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    ||||| ||| ||||||||||||||    
T  17287683 atgctaccccaaggttcaactctc 17287660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 29060575 - 29060796
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| || | ||| ||| |||||||| |  ||||||   |    
T  29060575 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattca 29060673  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  ||||||||||||| | | ||||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||||  || ||||||||||| |    
T  29060674 taattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaatatcatcattaagtctca 29060773  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||| |||||||| ||||    
T  29060774 atactaccccaaggttcagctct 29060796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19303626 - 19303406
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| || ||||| ||| | ||| |||| ||||||||||||||||||| || | ||| ||| |||||||| |  ||||||   ||    
T  19303626 cagcttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcat 19303528  T
Q  100 tcttcaagtaatg--cataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
      |||||||||||  ||||| ||||||||||||||||||||| || ||||| |||||  |||||||||||||||||||||||| || ||||||| ||| |    
T  19303527 atttcaagtaatgtacataa-cattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcatcattaattctca 19303429  T
Q  198 atgctgcccaaaggttcaactct 220  Q
     |||| ||| |||||||||||||    
T  19303428 gtgctaccccaaggttcaactct 19303406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18409913 - 18409691
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||| ||||||||||||| |||||||| ||||| ||| |  |||||||||||||||||||||| || | ||| ||| |||||||| |   || ||   |    
T  18409913 cagctcagttaaataacaa-cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatccattca 18409815  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  ||||| |||| |||| | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || ||||||||||| |    
T  18409814 taattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtctca 18409715  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| ||||||||||||||    
T  18409714 atactaccctaaggttcaactctc 18409691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 220
Target Start/End: Complemental strand, 25629400 - 25629220
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca 139  Q
    ||||| |||||||||| ||||| || | ||| ||| |||||||| |  ||||||   ||  |||||||||||| || | |||||||||||||||||||||    
T  25629400 aaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacattcataattcaagtaatgcgtataacattatatcacatcataatca 25629301  T
Q  140 tcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 220  Q
     || ||||| |||||| ||||||||||||||||||||||||  | ||||||||||| ||| || ||| |||||||||||||    
T  25629300 acatcaacacatcttaaacagcttcacagattataattaacaacatcattaagtctcaatactaccccaaggttcaactct 25629220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20593808 - 20594026
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||| |||||||||| ||||||||||| | ||| ||| |  ||||| |||||||||||||||| || | ||| ||| |||||||| |  |||||||  |    
T  20593808 cagctcagttaaataa-aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaatca 20593906  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |   ||||||||||| || | || |||||||||||||||||| || ||||| |||||| |||||||||||||||||||||| | |  ||||||||||| |    
T  20593907 taaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattatcattatcattaagtctca 20594006  T
Q  198 atgctgcccaaaggttcaac 217  Q
    || || ||| ||||||||||    
T  20594007 atactaccccaaggttcaac 20594026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16496279 - 16496396
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| ||||||| |||||||||| |||| ||||||    
T  16496279 cagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaata 16496377  T
Q  99 ttcttcaagtaatgcataa 117  Q
     |  |||||||||||||||    
T  16496378 attctcaagtaatgcataa 16496396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 25603370 - 25603250
Alignment:
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||| ||| | ||| |||||||||||||||||   || | | |||||| ||||||||||||||| || | ||| || ||||||||||||||     
T  25603370 cttcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcacagattctattaaacatcgtcattaagtcttaaa 25603271  T
Q  200 gctgcccaaaggttcaactct 220  Q
    ||| |||||||||||||||||    
T  25603270 gctacccaaaggttcaactct 25603250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 27416008 - 27415887
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaat-attcttcaagtaatgcat-a 116  Q
    ||||||||||||||||  || |||||| |||||||||||| ||| |||||||||||| |||||||||   ||| ||||| |||||| | ||||||||| |    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 27415910  T
Q  117 atcattatatcacatcataatca 139  Q
    | ||||||||||||| |||||||    
T  27415909 aacattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 20076735 - 20076863
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||| |||||||||||||||| ||  | ||||| |||||||||||||||| || | |||   |||||||||||| | || ||| |||    
T  20076735 cagcttagttaaataac-aacagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatcttaaaaattcaattat 20076830  T
Q  100 tcttcaagtaatgcata-atcattatatcacat 131  Q
     ||||||||||||| || | |||||||||||||    
T  20076831 acttcaagtaatgcgtataacattatatcacat 20076863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20109173 - 20109285
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||||||| | |||| ||||| || | ||| |||||||||||| | |||| || ||||    
T  20109173 cagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatat 20109272  T
Q  100 tcttcaagtaatg 112  Q
      |||||||||||    
T  20109273 aattcaagtaatg 20109285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27333304 - 27333262
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  27333304 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 27333262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27394044 - 27394002
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  27394044 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 27394002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 25611708 - 25611588
Alignment:
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||| ||| | ||| |||||||||||||||||   || | | |||||| ||||||||| ||||| |  | ||| || |||||||||| |||     
T  25611708 cttcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcatagattctgttaaacatcgtcattaagtcctaaa 25611609  T
Q  200 gctgcccaaaggttcaactct 220  Q
    ||| |||||||||||||||||    
T  25611608 gctacccaaaggttcaactct 25611588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9098600 - 9098558
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||    
T  9098600 cagcttagttaaataacaaacagcaacaaaggcagtatgcaaa 9098558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25644355 - 25644397
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||    
T  25644355 cagcttagttaaataacagacagcaacataggcagtatgcaaa 25644397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28496557 - 28496495
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||  ||||||||||||| ||| |||| || ||||| ||||||||||    
T  28496557 cagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatat 28496495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29808968 - 29808906
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||  ||||||||||||| ||| |||| || ||||| ||||||||||    
T  29808968 cagcttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatat 29808906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23019441 - 23019525
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    ||||||||||||  |||||||||||||||| ||| ||| | ||||||||||| |||| ||||| || | ||| ||| ||||||||    
T  23019441 cagcttagttaataaacaaacagcaacataagcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcaacaacatct 23019525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 20946 - 21167
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||| |||||| |||||||||||||||||| ||||  ||||||||||||||||||| |||| ||||||| |||||||||| |||| ||||| |    
T  20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgt 21045  T
Q  100 tcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||| ||||||||||||||  ||||||||||||||||||||| || ||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  21046 tctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatcttcattaagtcttaa 21145  T
Q  199 tgctgcccaaaggttcaactct 220  Q
    | || |||||||||||||||||    
T  21146 tactacccaaaggttcaactct 21167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1135 - 915
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||| ||| ||||| ||||||||||| ||| ||| || ||||||||||| |||| |||||||||||||||||||||||  ||||||||||||    
T  1135 cagcttagttaattaataaacatcaacataggcagtatacaa-catcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaatatt 1037  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |  ||||| ||||||     
T  1036 cttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagattatagttaacctcattcttaagacttaatc 937  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  936 ctacccaagggttcaactctcg 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16317 - 16537
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||| ||||||||||||||||| ||| ||| || ||||||||||| |||| || |||||||||||||||| |||  |||||||| |||    
T  16317 cagcttagttaaataagaaacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaacatt 16415  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||     
T  16416 cttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattattaagtcttaatc 16515  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || |||||  ||||||||||||    
T  16516 ctacccaagcgttcaactctcg 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 20698521 - 20698299
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||| ||||||||| |||| |||||||||||||||||| |||| ||||||    
T  20698521 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattcaaata 20698423  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||||||||||||||||||| ||||||||||||||||||||| |  ||||| |||||  |||||||||||||||||||||||| || ||||||||||||||    
T  20698422 ttcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattataattaacatcatcattaagtcttaa 20698323  T
Q  199 tgctgcccaaaggttcaactctcg 222  Q
    | ||  ||||||||||||||||||    
T  20698322 ttctatccaaaggttcaactctcg 20698299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13442309 - 13442532
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| | |||||||||||| ||| ||||  ||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  13442309 cagcttagttaaataacaa-cggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 13442407  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  13442408 ttcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctta 13442507  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    |||    || |||||||||||||||    
T  13442508 atgtcatcccaaggttcaactctcg 13442532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17487891 - 17488114
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||| |||| || ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  17487891 cagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 17487989  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| |||| ||||||||||||||||||| || |||||||||||||    
T  17487990 ttcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagattataattaacatcatcattaagtctta 17488089  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    |||||  || |||||||||||||||    
T  17488090 atgctatcccaaggttcaactctcg 17488114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17499373 - 17499596
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||| |||| || ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  17499373 cagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 17499471  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||||| | ||||||||||||||| ||||| || ||||| |||||| |||| |||||| |||||||||||| || |||||||||||||    
T  17499472 ttcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattataattaacatcatcattaagtctta 17499571  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    |||||  || |||||||||||||||    
T  17499572 atgctatcccaaggttcaactctcg 17499596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 12399244 - 12399456
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| || | ||||||| |||||||||| |||| ||||||    
T  12399244 cagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaaata 12399342  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
     |  |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| | |||||||||||||||| ||||||||||||||| ||||||    
T  12399343 attctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattatagttaacctcttcattatgtctta 12399442  T
Q  198 atgctgcccaaagg 211  Q
    ||||| ||||||||    
T  12399443 atgctacccaaagg 12399456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 14576915 - 14576697
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattca-aacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    |||||||||||||||| ||||||||||| || |||  | |||| |||||||||||||||| |||| ||| ||| |||||||||| |||| ||| ||| ||    
T  14576915 cttagttaaataacaa-cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
Q  103 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||| | ||||||||||||||||||||| || ||||| |||||| ||| |||||||||||||||||||| || ||||||| ||||||| |    
T  14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatcattaaatcttaatac 14576717  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | ||| ||||||||||||||    
T  14576716 taccccaaggttcaactctc 14576697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 14972889 - 14973110
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||||  || |||||||||||||||| || | ||| ||| |||||||| | |||||||   |    
T  14972889 cagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatacattca 14972987  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  ||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| |    
T  14972988 taattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtctca 14973087  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||| |||||||||||||    
T  14973088 atactaccccaaggttcaactct 14973110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26686922 - 26687144
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||  || |||||||||||||||| |||| ||| ||| || ||||||| |||| | | ||    
T  26686922 cagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattccatta 26687020  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||  |    
T  26687021 tacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtccca 26687120  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||| || |||||||||||    
T  26687121 atactaccccaaagttcaactctc 26687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 23083447 - 23083226
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||  ||  ||||||||||||||| |||| ||| ||| |||||||||| |||| ||| |     
T  23083447 cagcttagttaaataacaat-agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattt 23083349  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||| ||||||||| | | |||||||||||||||||||||  | ||||| |||||| ||||||||||||||| |||||||| || ||| |||||||||    
T  23083348 tacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcatcactaagtctta 23083249  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||  |||||||||||||    
T  23083248 atactacctcaaggttcaactct 23083226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14572624 - 14572845
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| ||||||||||| || ||| |||| || |||||||||||||||| ||||   | ||| |||||||||| |||| ||| |||    
T  14572624 cagcttagttaaataacaa-cagcaacatagacagtatacaaaacagcatgacataataatatcaattgagagtcaacaacatcttaaatattcaattat 14572722  T
Q  100 tcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||||| ||||| | ||  |||||||||||||||||| || ||  |||| |||||| ||| ||||||| |||||||||||| || ||||||||||||||    
T  14572723 acttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatcattaagtcttaa 14572822  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  14572823 tactaccccaaggttcaactctc 14572845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 16796685 - 16796803
Alignment:
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||||  |||||||||||||||||||||  ||||||| |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgc 16796784  T
Q  202 tgcccaaaggttcaactct 220  Q
    | |||||||||||||||||    
T  16796785 tacccaaaggttcaactct 16796803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 43840967 - 43841162
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || |||||||| || ||| ||||  || |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||    
T  43840967 cagcttagttaaataacaa-caacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaatta 43841065  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtc 194  Q
    | |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || || |||||||    
T  43841066 tacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcgttaagtc 43841162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 18438570 - 18438787
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||||| |||||||||||||| ||| ||||  || ||||| |||||||||| || | ||| ||| |||||||||   ||||||   ||    
T  18438570 agcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacattcat 18438668  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
       |||||||||||||| | ||||||||||||||||| ||| || ||||| |||||| |||||||||||||||||| ||||| || ||||||||||| ||    
T  18438669 atctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtctcaa 18438768  T
Q  199 tgctgcccaaaggttcaac 217  Q
    | || ||| ||||||||||    
T  18438769 tactaccccaaggttcaac 18438787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 24153294 - 24153115
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||| |  ||||||||||| | ||| |||| || |||||||||||||||| || | ||| ||| |||||||||| |||| ||| |||    
T  24153294 cagcttagttaaataacgat-agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattat 24153196  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaa 179  Q
     |||||| ||||||| | | ||| ||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||    
T  24153195 acttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 25476470 - 25476249
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||| ||||| |||||||| ||| | ||| ||||  || |||||||||||||||| || | ||| ||| |||||||| |  ||||||   ||    
T  25476470 agcttagttaaaaaacaa-cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcat 25476372  T
Q  100 tcttcaagtaatgc--ataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
      ||||||||||||  |||| |||||||||||||||| ||||||| ||||| |||||| ||||||||||||||| |||||||| || ||||||||||| |    
T  25476371 aattcaagtaatgcgcataa-cattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgtaattaacatcctcattaagtctca 25476273  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || ||  ||||||||||||||    
T  25476272 atactacctcaaggttcaactctc 25476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 221
Target Start/End: Complemental strand, 40213766 - 40213585
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca 139  Q
    ||||| |||||||||||||||| || | ||| ||| |||||||| |  ||||||   ||  | |||||||||| || | |||||||||||||||||||||    
T  40213766 aaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcataatccaagtaatgcgtataacattatatcacatcataatca 40213667  T
Q  140 tcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
     || ||||| |||||| ||||||| |||||||||||||||| || ||||||||||| ||| || ||| |||||| |||||||    
T  40213666 acatcaacacatcttaaacagctttacagattataattaacatcatcattaagtctcaatactaccccaaggttaaactctc 40213585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 14179570 - 14179653
Alignment:
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctctt 185  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||    
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttctt 14179653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11424845 - 11424627
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| || |||||||||| ||||| |||  |||   |||||||||| |  ||| ||   ||    
T  11424845 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattatgcattcat 11424750  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
      |||||||||||| || | |||||||||||||||||| || |  ||||| |||||| |||||||||||||||| ||||||| ||  |||||||||| ||    
T  11424749 aattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacattaagtctcaa 11424650  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| || |||||||||||    
T  11424649 tactaccccaaagttcaactctc 11424627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 222
Target Start/End: Original strand, 30029917 - 30030097
Alignment:
Q  42 aacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcat 140  Q
    |||| |||||||||| ||||| | || ||||||| |||| ||||| |||| |||  |  |||||||||||| | | | |||||||||||||||||||||     
T  30029917 aacagcatgacataagaatatcatttgcaattca-caacgtcttaaatattcaataaaacttcaagtaatgtacacaacattatatcacatcataatcaa 30030015  T
Q  141 caacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 222  Q
       ||| | |||||| ||||||||||| |||||| | ||| || |||||||||||||| ||| |||||||||||||||||||    
T  30030016 tgtcaaaacatcttaaacagcttcacatattatattaaacatcatcattaagtcttaaagctacccaaaggttcaactctcg 30030097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 42386449 - 42386627
Alignment:
Q  5 ttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    ||||||||||||||| |||||||||||||| ||| ||||  || |||||||||| ||||| || | ||| ||| |||||||| | |||| ||   ||  |    
T  42386449 ttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcattcataat 42386547  T
Q  103 tcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatctt-atacagcttcacagattataattaac 180  Q
    ||||| |||||||| | ||||||||||||||||||||| || ||| | ||||| | ||||||||||||||||| ||||||    
T  42386548 tcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaac 42386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12174345 - 12174303
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  12174345 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 12174303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13210413 - 13210351
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||| ||||||||||||| ||| |||| || ||||| ||||||||||    
T  13210413 cagcttagttaaataacaaatagcaacataggcagtatgcaaaccatcatgatataataatat 13210351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16097363 - 16097405
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  16097363 cagcttagttaaataacaaacaacaacataggcaatatgcaaa 16097405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32307712 - 32307754
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  32307712 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 32307754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49668162 - 49668120
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  49668162 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 49668120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 856236 - 856304
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcata 135  Q
    ||||||||| ||||||||||  ||||||| || |||||||||||| ||||| |||||||  ||||||||    
T  856236 ttcaattcaacaacatcttatgtatacaattaatcttcaagtaatacataaacattataatacatcata 856304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15470959 - 15471043
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||| ||||||||||||||| ||| |||| || ||||| |||| |||||  | | ||| ||||||||||||    
T  15470959 cagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14234522 - 14234605
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatc 83  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| || ||||| |||| |||||  | | ||| |||||||||||    
T  14234522 cagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 14234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 53301634 - 53301575
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatat 62  Q
    |||||||||||||||||||||||||||| || ||| | ||||||||||| |||| |||||    
T  53301634 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatat 53301575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9512955 - 9512997
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||    
T  9512955 cagcttagttaaacaacaaacagcaacataggcagtatgcaaa 9512997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9520930 - 9520972
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||    
T  9520930 cagcttagttaaacaacaaacagcaacataggcagtatgcaaa 9520972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 28194725 - 28194755
Alignment:
Q  1 cagcttagttaaataacaaacagcaacatag 31  Q
    |||||||||||||||||||||||||||||||    
T  28194725 cagcttagttaaataacaaacagcaacatag 28194755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52523815 - 52523773
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  52523815 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 52523773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12567592 - 12567722
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||||||||| | ||||||| |  ||||| |||||||||||||||| || | ||| ||| |||| ||| |  ||| || |||    
T  12567592 cagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacata 12567689  T
Q  99 ttcttcaagtaatgcata-atcattatatcaca 130  Q
    |  ||||||||||||||| || |||||||||||    
T  12567690 taattcaagtaatgcatatataattatatcaca 12567722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13544057 - 13544187
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||||||||| | ||||||| |  ||||| |||||||||||||||| || | ||| ||| |||| ||| |  ||| || |||    
T  13544057 cagcttagttaaataac-aacagcaacaca-gcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacata 13544154  T
Q  99 ttcttcaagtaatgcata-atcattatatcaca 130  Q
    |  ||||||||||||||| || |||||||||||    
T  13544155 taattcaagtaatgcatatataattatatcaca 13544187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27165282 - 27165366
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||||| |||| || ||| | ||||||||||| |||  ||||| || | ||| ||||||| ||||    
T  27165282 cagcttagttaaataacaaacagcaatatagacagtatgcaaaacaacatgatataccaatatcaaatgcaagtcatcaatatct 27165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 13246 - 13465
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  13246 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 13344  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||||| | ||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||||||||| || |||||||||||||    
T  13345 ttcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattataattaacatcatcattaagtctta 13444  T
Q  198 atgctgcccaaaggttcaact 218  Q
    |||||  || |||||||||||    
T  13445 atgctatcccaaggttcaact 13465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1324 - 1544
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||||||||||||||| | | ||| || ||||||||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  1324 cagcttagttaaataacaaacagcaacataggcagtgtacaa-catcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 1422  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||| |  ||||||||||||     
T  1423 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagtcttaatc 1522  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| ||| |||||||||    
T  1523 ctacccaagggtccaactctcg 1544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7301 - 7521
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| |||||||| ||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  7301 cagcttagttaaataacaaacaacaacataggcagtatacaa-caacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 7399  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||| |  ||||||||||||     
T  7400 cttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagattatagttaacctcattcttaagtcttaatc 7499  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| ||| |||||||||    
T  7500 ctacccaagggtccaactctcg 7521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 47031 - 47244
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattc 101  Q
    ||||||||||||||||||||| ||||||||||| | | ||  || |||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  47031 agcttagttaaataacaaacaacaacataggcagtttacag-cagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattc 47129  T
Q  102 ttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    | |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||      ||| |  |||||||||||| |    
T  47130 tccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagattata------ctcattgttaagtcttaatcc 47223  T
Q  202 tgcccaaaggttcaactctcg 222  Q
    | ||||| |||||||||||||    
T  47224 tacccaagggttcaactctcg 47244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1886 - 2109
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| ||||||||||| || ||| ||||  ||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||    
T  1886 cagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaata 1984  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| | |||||||||||||||||||||| || |||||||||||||    
T  1985 ttcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaacatcctcattaagtctta 2084  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    || ||  || |||||||||||||||    
T  2085 atactatcccaaggttcaactctcg 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 4747 - 4965
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||  || ||||||||||  | || |||| ||||||||||| ||||||  ||||||||||    
T  4747 cagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaata 4845  T
Q  99 ttcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| |  |||||||||||    
T  4846 ttcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaa 4945  T
Q  199 tgctgcccaaaggttcaact 218  Q
    | || |||||||||||||||    
T  4946 tcctacccaaaggttcaact 4965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 41 - 218
Target Start/End: Original strand, 12 - 189
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcat 140  Q
    ||||| ||||||||||  | || |||| ||||||||||| ||||||  |||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  12 aaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaa 111  T
Q  141 caacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaact 218  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |  |||||||||||| || |||||||||||||||    
T  112 caacaacatatcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaact 189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 3506 - 3727
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||| || ||||||||||||| ||| ||||  || |||||||||||||||| |||| |||||||||||||||||| |||| |||||||    
T  3506 agcttagttaaataactaa-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat 3604  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
    ||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || ||||||||||||||    
T  3605 tcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcctcattaagtcttaa 3704  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| || |||||| ||||    
T  3705 tactaccccaaagttcaattctc 3727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 378 - 599
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa-catgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| ||  |||||||||| ||| ||||  | |||||| ||||||||| ||||  || ||| |||||||||| |||| | | |||    
T  378 cagcttagttaaataacaa-caataacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcgattat 476  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| | |||||||||||| || ||||||||||| ||    
T  477 acttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctcattaagtctcaa 576  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  577 tactaccccaaggttcaactctc 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 5214 - 4994
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||| ||||||||| | ||| ||| || ||||||||||| |||| || ||||||||||||||||||||  |||||||| |||    
T  5214 cagcttagttaaataacaaacatcaacataggtattatacaa-catcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacatt 5116  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    |||||||||||| |||| ||||||| |||||| |||||| ||||||||||| |||| ||| |||||| ||||||||||||||  | ||||| |||||||     
T  5115 cttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatattataattaaccttattattaaatcttaatc 5016  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| |||||||||||||    
T  5015 ctacccaagggttcaactctcg 4994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 51617 - 51837
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    |||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||| |||  || ||||||||||||||||||||  |||||||||||     
T  51617 cagcttagttaaataacaaacagcaacataggcagtatacaa-catcatgacataattataacaaattcaattcatcaacatcttatgtatacaaatatc 51715  T
Q  101 cttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||| ||||||||| ||||||| ||| ||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||    ||||||||||||     
T  51716 cttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagattatagttaacctcactcttaagtcttaatc 51815  T
Q  201 ctgcccaaaggttcaactctcg 222  Q
    || ||||| ||| ||| |||||    
T  51816 ctacccaagggtccaattctcg 51837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1987 - 2210
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||||||||| |||||| |||| ||||||||| ||| ||||  |||||||||||||| |||| |||| ||||||| |||||||||| |||| |||| |    
T  1987 cagcttagttaattaacaa-cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattcaaaca 2085  T
Q  99 ttcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    || ||||||||||||||||  ||||||||| ||||||||||| |||||||||||| |||||||||| ||| ||||| | ||||||  |||||||||||||    
T  2086 ttattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatattattaataaccttatcattaagtctta 2185  T
Q  198 atgctgcccaaaggttcaactctcg 222  Q
    || || |||||||||||||||||||    
T  2186 atcctacccaaaggttcaactctcg 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 6210 - 5984
Alignment:
Q  1 cagcttagttaaataacaa--acagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaa 96  Q
    |||||||||||||||||||  ||| ||||||||| | ||| ||||  || |||||||| ||||||| |||| |||||||||||||||||| |||| ||||    
T  6210 cagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatattcaaa 6111  T
Q  97 tattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtct 195  Q
    |||||||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||  ||||||||||| || |||||||||||    
T  6110 tattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacattttataattaacatcatcattaagtct 6011  T
Q  196 taatgctgcccaaaggttcaactctcg 222  Q
    |||||||  || ||||||| |||||||    
T  6010 taatgctatcccaaggttccactctcg 5984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24389 - 24164
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa---caacatgacataataatataaatttcaattcatcaacatcttagatatacaaat 97  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||   || |||||||||| ||||| |||| |||||||||||||||||| |||| |||||    
T  24389 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaat 24291  T
Q  98 attcttcaagtaatgcata-atcattatatcacatcataa-tcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtct 195  Q
    ||||||||||||||||| | | |||||||||||||||||| ||| || ||||| |||||| |||||||||||||||||||||||| || ||| |||||||    
T  24290 attcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaacatcctcaataagtct 24191  T
Q  196 taatgctgcccaaaggttcaactctcg 222  Q
    |||| ||  || || ||||||||||||    
T  24190 taatactatcccaaagttcaactctcg 24164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 124675 - 124843
Alignment:
Q  55 aataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatct 153  Q
    |||||||| |||| |||||||||||| | ||| |||| |||||||||||||||||||||||| | ||||||||||||||||||||| || ||||| ||||    
T  124675 aataatatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatct 124774  T
Q  154 tatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 222  Q
    || |||||||||||||||||||||||| || ||||||||||||||||||  || |||||||||||||||    
T  124775 taaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcg 124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 174801 - 174883
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||||||||||||| ||| | |||| |||||||| || |||| || ||||||||| ||||||||    
T  174801 cagcttagttaaataacaaacagcaacataggcagtatac-aacagcatgacatgattatatcaaattcaattcaacaacatct 174883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 38796 - 39017
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||| |||||||||||  ||||||||||||| ||| |||| || |||||||||||||||| || | ||| | | |||||||||| |||| ||| |||    
T  38796 cagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaattat 38894  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||||||    
T  38895 acttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaa 38994  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  38995 tactaccccaaggttcaactctc 39017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32977 - 33153
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||| |||||||||||  ||||||||||||| ||| |||| || |||||||||||||||| || | ||| | | |||||||||| |||| ||| |||    
T  32977 cagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattat 33075  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataat 176  Q
     |||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  33076 acttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataat 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 4888 - 5098
Alignment:
Q  5 ttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattct 102  Q
    ||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| || | ||||||| ||||||||||  ||| |||||| |      
T  4888 ttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaaataattc 4986  T
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||  ||||| ||||||||||||||| |||    
T  4987 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattatagctaaccccttcattaagtcttattgc 5086  T
Q  202 tgcccaaaggtt 213  Q
    |  |||||||||    
T  5087 tagccaaaggtt 5098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 6669 - 6868
Alignment:
Q  26 acataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataat-catt 122  Q
    ||||||||| ||| ||||  |||||||||||||| |||| |||  ||||||| |||||||||| |||| |||| ||| ||||||||||||||||  | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  123 atatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 222  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||  ||||||| ||||||| || |||||||||||||||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactctcg 6868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3236 - 3015
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||| || | ||| ||| |||||||| | |||||||   ||    
T  3236 cagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcat 3138  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
      ||||||||||||||| | ||||||||||||||||||||| || ||||  |||||| |||||||||||| ||||||||||| || ||||||||||| ||    
T  3137 aattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttataattaacatcatcattaagtctcaa 3038  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  3037 tactaccccaaggttcaactctc 3015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 25932 - 26152
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaacaa-catgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||  ||||||||||||| ||| ||||  | |||||||||||||||| || | ||| | | |||||||| | |||| ||| |||     
T  25932 agcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattata 26030  T
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||  | ||||||||||||||||||||| || ||||  |||||| |||||||||||||||||||||||| || ||||||||||| |||    
T  26031 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctcattaagtctcaat 26130  T
Q  200 gctgcccaaaggttcaactctc 221  Q
    ||| ||| ||||||||||||||    
T  26131 gctaccccaaggttcaactctc 26152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 39894 - 40113
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaacaa-catgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||||  ||||||||||||| ||| ||||  | |||||||||||||||| || | ||| | | |||||||| | |||| ||| |||     
T  39894 agcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattata 39992  T
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
    |||||||||||||||  | ||||||||||||||||||||| || ||||  |||||| ||||||||||| |||||||||||| || ||||||||||| |||    
T  39993 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctcattaagtctcaat 40092  T
Q  200 gctgcccaaaggttcaactctc 221  Q
    ||| ||| ||||||||||||||    
T  40093 gctaccc-aaggttcaactctc 40113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 13141 - 13349
Alignment:
Q  16 acaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgc 113  Q
    ||||||||||||||||||| ||| ||||  || |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| ||| |||||||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  114 ata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggt 212  Q
    | | | |||||||||||| |||||||| || ||||| |||||| |||| ||||||||||||||||||| |||||||||||||  ||| || ||| || ||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaatactaccccaaagt 13340  T
Q  213 tcaactctc 221  Q
    |||||||||    
T  13341 tcaactctc 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34158 - 34220
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaa-acaacatgacataataatat 62  Q
    |||||||||||||||||||||| ||||||||||| ||| |||  || ||||| ||||||||||    
T  34158 cagcttagttaaataacaaacaacaacataggcagtatacaacccatcatgatataataatat 34220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 221
Target Start/End: Original strand, 22958 - 23139
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca 139  Q
    ||||| |||||||||||||||| || | ||| ||| |||||||||| |||| ||| ||| |||||||||||||| | | |||||||||||||| ||||||    
T  22958 aaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcgtaatca 23057  T
Q  140 tcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
     || ||||| |||||| ||||||||||||||||||| |||| || ||||||||||| ||| || ||| ||||||||||||||    
T  23058 acatcaacacatcttaaacagcttcacagattataaataacatcatcattaagtctcaatactaccccaaggttcaactctc 23139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 4544 - 4763
Alignment:
Q  3 gcttagttaaataacaaacagcaacataggca--atattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||| |||||||| | |||  ||||  ||||| |||||||||||||||| || | ||| ||| |||||||| | |||||||   ||     
T  4544 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 4642  T
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
     |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||| |||    
T  4643 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 4742  T
Q  200 gctgcccaaaggttcaactct 220  Q
     || ||| |||||||||||||    
T  4743 actaccccaaggttcaactct 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 12126 - 12345
Alignment:
Q  3 gcttagttaaataacaaacagcaacataggca--atattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||| |||||||| | |||  ||||  ||||| |||||||||||||||| || | ||| ||| |||||||| | |||||||   ||     
T  12126 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 12224  T
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
     |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||| |||    
T  12225 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 12324  T
Q  200 gctgcccaaaggttcaactct 220  Q
     || ||| |||||||||||||    
T  12325 actaccccaaggttcaactct 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 22078 - 22297
Alignment:
Q  3 gcttagttaaataacaaacagcaacataggca--atattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatatt 100  Q
    ||||||||||||||||| |||||||| | |||  ||||  ||||| |||||||||||||||| || | ||| ||| |||||||| | |||||||   ||     
T  22078 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 22176  T
Q  101 cttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaat 199  Q
     |||||||||||| || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||| |||    
T  22177 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 22276  T
Q  200 gctgcccaaaggttcaactct 220  Q
     || ||| |||||||||||||    
T  22277 actaccccaaggttcaactct 22297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 1052 - 1171
Alignment:
Q  103 tcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgc 201  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||||| |    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatac 1151  T
Q  202 tgcccaaaggttcaactctc 221  Q
    | |||||| |||||||||||    
T  1152 tacccaaaagttcaactctc 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 3640 - 3738
Alignment:
Q  123 atatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  3640 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctc 3738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 7704 - 7802
Alignment:
Q  123 atatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  7704 atatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctc 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 39512 - 39729
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| || ||||||||||| ||| |||| || |||||||||||||||| || | ||| ||| |||||||| | |||||||   ||    
T  39512 cagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcat 39610  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
      ||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || | ||||||||| ||    
T  39611 aattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtctcaa 39710  T
Q  199 tgctgcccaaaggttcaac 217  Q
    | || ||| ||||||||||    
T  39711 tactaccccaaggttcaac 39729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 8615 - 8424
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||    |||||||||||| |||  ||| || |||||||||||||||| |||| ||| ||| || ||||||| |||| ||| |||    
T  8615 cagcttagttaaataaca----gcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattat 8520  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtc 194  Q
     |||||||||||||| | | |||||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||    
T  8519 acttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtc 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 39948 - 40169
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||| |||||||||||  ||||||||||||| ||| |||| ||||||||||||||||||| || | ||  |||  ||||||||| ||||   | |||    
T  39948 cagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttgattat 40046  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||||||||||||| | | ||||||||||||||||||||| || ||||| ||| || | |||||||||||||||||||||| || ||||||||||| ||    
T  40047 acttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatcattaagtctcaa 40146  T
Q  199 tgctgcccaaaggttcaactctc 221  Q
    | || ||| ||||||||||||||    
T  40147 tactaccccaaggttcaactctc 40169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 75300 - 75083
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||| || ||||||||||| ||| |||| || |||||||||||||||| || | ||| ||| |||||||| | |||||||   ||    
T  75300 cagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcat 75202  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
      ||||||||||||| | | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || | ||||||||| ||    
T  75201 aattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcattattaagtctcaa 75102  T
Q  199 tgctgcccaaaggttcaac 217  Q
    | || ||| ||||||||||    
T  75101 tactaccccaaggttcaac 75083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 340033 - 339818
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||||||||  || ||||||||||| ||| |||| ||||||||||||||||||| || | ||| ||| |||||||| |  ||||||   ||    
T  340033 cagcttagttaaataaca--caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtatacattcat 339937  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
      |||||||||||  || | ||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||| || ||||||||||| ||    
T  339936 aattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatcattaagtctcaa 339837  T
Q  199 tgctgcccaaaggttcaac 217  Q
    | || ||| ||||||||||    
T  339836 tactaccccaaggttcaac 339818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 71353 - 71474
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaat-attcttcaagtaatgcat-a 116  Q
    ||||||||||||||||  || |||||| |||||||||||| ||| |||||||||||| |||||||||   ||| ||||| |||||| | ||||||||| |    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattctt-aggtaatgcataa 71451  T
Q  117 atcattatatcacatcataatca 139  Q
    | ||||||||||||| |||||||    
T  71452 aacattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 26151 - 25930
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || |||||||||||||||| || |  |||||| |||| ||| |  ||||||   |    
T  26151 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatacattca 26053  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  |||||||||||| |  | ||||||||||||||||||||| || ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| |    
T  26052 taattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtctca 25953  T
Q  198 atgctgcccaaaggttcaactct 220  Q
    || || ||| |||||||| ||||    
T  25952 atactaccccaaggttcagctct 25930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 33461 - 33360
Alignment:
Q  119 cattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaact 218  Q
    ||||||||||||||||||||| || ||||  |||||| ||||||||| || ||||||||||| || ||||||||||| ||| || ||| |||||||||||    
T  33461 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaact 33362  T
Q  219 ct 220  Q
    ||    
T  33361 ct 33360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 44793 - 44699
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatataca 94  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||||  || |||||||||||||||| || | ||| ||| |||||||| | |||||||    
T  44793 cagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 44699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 220
Target Start/End: Original strand, 27912 - 28086
Alignment:
Q  47 catgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatcatcaaca 145  Q
    |||||||||||||||| || | ||| ||| |||||||| | |||||||   ||  ||||||||||||||| | ||||||||||||||||||||| || ||    
T  27912 catgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatca 28011  T
Q  146 acatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 220  Q
    ||| |||||| ||| |||||||| ||||||||||| || ||||||||||| ||| || ||| |||||||||||||    
T  28012 acaaatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactct 28086  T

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Target: scaffold0056 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17303 - 17079
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaacaa----catgacataataatataaatttcaattcatcaacatcttagatatacaaa 96  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||    |||||||||||||||| || | ||| ||| |||||||| |  ||||||      
T  17303 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacatt 17205  T
Q  97 tattcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtct 195  Q
     ||  |||||||||||| |  | ||||||||||||||||||||| || |||||  ||||| ||||||| |||||||||||||||| || | |||||||||    
T  17204 cataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagattataattaacatcatgattaagtct 17105  T
Q  196 taatgctgcccaaaggttcaactctc 221  Q
     ||| || ||| |||||| |||||||    
T  17104 caatactaccccaaggtttaactctc 17079  T

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Target: scaffold0217 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16686 - 16466
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| | ||| ||| |  ||||| |||||||||||||||| || |  || ||| || ||||| |  ||||||   |    
T  16686 cagcttagttaaataacaa-cagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatacattca 16588  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    |  |||||||||||| || | ||||||||||||||| ||||| || ||||| |||||| ||||||||||||| |||||||||| || ||||||||||| |    
T  16587 taattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcatcattaagtctca 16488  T
Q  198 atgctgcccaaaggttcaactc 219  Q
    || || ||| ||||||||||||    
T  16487 atactaccccaaggttcaactc 16466  T

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Target: scaffold0215 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 26924 - 27027
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||  |||||||||||| ||  ||||| || || ||||||||||    
T  26924 ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctcata-acagcttcac 27022  T
Q  167 agatt 171  Q
    |||||    
T  27023 agatt 27027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 8514 - 8732
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    |||||| ||||||||||||  ||||||||||| | ||| ||||  ||  ||||||||||||||| |||| ||| ||| |||||||||| | || ||| |     
T  8514 cagcttggttaaataacaat-agcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaacatcttaaacattcaagtg 8612  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtctta 197  Q
    | |||||||||||||| | | |||||    |||||||||||| || ||||| ||| || ||||||||||||||| |||||||| || |||||||||||||    
T  8613 tacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcatcattaagtctta 8708  T
Q  198 atgctgcccaaaggttcaactctc 221  Q
    || || | | ||||||||||||||    
T  8709 atactactccaaggttcaactctc 8732  T

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Target: scaffold0235 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 11440 - 11377
Alignment:
Q  158 cagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  11440 cagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctc 11377  T

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Target: scaffold0235; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11529 - 11447
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacat 82  Q
    ||||||||||||||||||| || ||||||||| | ||| ||||  ||||||||||||||||||| |||||||||||||||||||    
T  11529 cagcttagttaaataacaa-caacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

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Target: scaffold0070 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 4629 - 4779
Alignment:
Q  70 aattcatcaacatcttagatatacaaatattcttcaagtaatgcataat-cattatatcacatcataatcatcaacaacatatcttatacagcttcacag 168  Q
    |||||| |||||||||| |||| ||  ||| |||||||||||||||||| |||||||||||||||| |||| || |||||| | | | ||||| |||||     
T  4629 aattcaacaacatcttaaatattcatttatacttcaagtaatgcataatacattatatcacatcatgatcaacatcaacatct-taaaacagcctcacaa 4727  T
Q  169 attataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 220  Q
    |||||||||||| |||||| ||||||| ||| || ||  |||||||||||||    
T  4728 attataattaacatcttcaataagtctcaatactacctcaaggttcaactct 4779  T

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Target: scaffold0107 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 15483 - 15362
Alignment:
Q  19 aacagcaacataggcaatattcaaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata-ttcttcaagtaatgcat-a 116  Q
    |||| |||||||||||  || |||||| |||||||||||||||| |||||||||||| |||||||||  |||| |||||| ||||| ||||||||||| |    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattctt-aagtaatgcataa 15385  T
Q  117 atcattatatcacatcataatca 139  Q
    | ||||||||||||| |||||||    
T  15384 aacattatatcacattataatca 15362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 17928 - 17851
Alignment:
Q  144 caacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctc 221  Q
    ||||| |||||| |||||||||||||||||||||||| || ||||||||||||||| || ||||||||||||| ||||    
T  17928 caacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctc 17851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 33042 - 32824
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||| |||||| |||||||| ||||| ||| |||| || |||||||||||||||| |||| ||||||| |||||||||| |||| | | |||    
T  33042 cagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attat 32945  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||| ||||||||||| | ||||||| |||||||| |||| || || |||   | | | ||||||||||||||||| ||||  ||||| ||||| | ||    
T  32944 acttcgagtaatgcatataacattataacacatcatgatcaacatcagcat-cataaaatagcttcacagattataactaacaccttcaataagtttcaa 32846  T
Q  199 tgctgcccaaaggttcaactct 220  Q
    | || ||| |||||||||||||    
T  32845 tactaccccaaggttcaactct 32824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 45963 - 46181
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||| |||||| |||||||| ||||| ||| |||| || |||||||||||||||| |||| ||||||| |||||||||| |||| | | |||    
T  45963 cagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attat 46060  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaa 198  Q
     |||| ||||||||||| | ||||||| |||||||| |||| || || |||   | | | ||||||||||||||||| ||||  ||||| ||||| | ||    
T  46061 acttcgagtaatgcatataacattataacacatcatgatcaacatcagcat-cataaaatagcttcacagattataactaacaccttcaataagtttcaa 46159  T
Q  199 tgctgcccaaaggttcaactct 220  Q
    | || ||| |||||||||||||    
T  46160 tactaccccaaggttcaactct 46181  T

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Target: scaffold0046 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28449 - 28552
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| || ||||||||||| ||| ||||  ||||||||||||||||||| |||| ||||||| |||||||||| |||| |||||     
T  28449 cagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatg 28547  T
Q  99 ttctt 103  Q
    |||||    
T  28548 ttctt 28552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11327 - 11389
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  11327 cagcttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatat 11389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2032 - 2094
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    ||||||||||||||||||||||  |||||||||| ||| |||| || ||||| ||||||||||    
T  2032 cagcttagttaaataacaaacacaaacataggcagtatgcaaaccatcatgatataataatat 2094  T

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Target: scaffold0084 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 10323 - 10419
Alignment:
Q  124 tatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactct 220  Q
    |||||||||||||||| || ||||| |||||| ||||||||||||||||| |||||| || | ||||||||| ||| || ||| |||||||||||||    
T  10323 tatcacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactct 10419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3272 - 3103
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||  || ||||| |||||||||| || |  |||||| |||||||| |  ||||||   |    
T  3272 cagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatacattca 3174  T
Q  99 ttcttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacag 168  Q
    |  |||||||||||| |  | ||||||||||||||||||||| || ||||| |||||| ||||||||||||    
T  3173 taattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 1977 - 2045
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcata 135  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||  ||||||||    
T  1977 ttcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcata 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 21824 - 21721
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  ||||| |||||| ||  ||||| || || ||||||||||    
T  21824 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 21726  T
Q  167 agatt 171  Q
    |||||    
T  21725 agatt 21721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 29716 - 29613
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacaacatatcttatacagcttcac 166  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  ||||| |||||| ||  ||||| || || ||||||||||    
T  29716 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcac 29618  T
Q  167 agatt 171  Q
    |||||    
T  29617 agatt 29613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 12859 - 12931
Alignment:
Q  67 ttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 139  Q
    ||||||||||||||||||||  ||||||| || |||||||||||||||||| |||||||  ||||||||||||    
T  12859 ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatca 12931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 3575 - 3424
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatgcata-atcattatatcacatcataatca 139  Q
    ||||| |||||||||||||||| || | ||| ||| |||||||| |  ||||||   ||  |||||||||||| || | |||||||||||||||||||||    
T  3575 aaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatca 3476  T
Q  140 tcaacaacatatctt-atacagcttcacagattataattaacctcttcatta 190  Q
     || ||||| ||||| | ||||||||| |||||||||||||| || ||||||    
T  3475 acatcaacacatcttaaaacagcttcatagattataattaacatcatcatta 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 53635 - 53498
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||||||||| |||| ||||| || | ||| |||||||||||| | |||| || ||||    
T  53635 cagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatat 53536  T
Q  100 tcttcaagtaatgcata-atcattatatcacatcataa 136  Q
      ||||||||||| ||| |  |||||||||||| ||||    
T  53535 aattcaagtaatgtatatacaattatatcacattataa 53498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8501 - 8613
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatat 99  Q
    |||||||||||||||||||||| ||||||||||| ||| | ||||| ||||| |||| ||||| || | ||| |||||||||||| | |||| || ||||    
T  8501 cagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatat 8600  T
Q  100 tcttcaagtaatg 112  Q
      |||||||||||    
T  8601 aattcaagtaatg 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6570 - 6612
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  6570 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 6612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15696 - 15758
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  15696 cagcttagttaaataacaaacagcaacataggcagtatacaaaccatcatgatataataatat 15758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 100409 - 100471
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||||    
T  100409 cagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatat 100471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 119910 - 119943
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  119910 cagcttagttaaataacaaacagcaacataggca 119943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40260 - 40227
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    |||||||||||||||| |||||||||||||||||    
T  40260 cagcttagttaaataataaacagcaacataggca 40227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 20596 - 20661
Alignment:
Q  157 acagcttcacagattataattaacctcttcattaagtcttaatgctgcccaaaggttcaactctcg 222  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||   | |||||||||||||||    
T  20596 acagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcg 20661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1067 - 1151
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||| ||||| |||| ||||| || | | | ||||||||||||    
T  1067 cagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10627 - 10543
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| |||| |||||  | | ||| ||||||||||||    
T  10627 cagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10543  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1155 - 1093
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatat 62  Q
    |||||||||||||||||||||| ||||||||||| ||| |||| || ||||| ||||||||||    
T  1155 cagcttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatat 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19299 - 19341
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  19299 cagcttagttaaataacaaacagcaacataggcagtatgcaaa 19341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 23968 - 23927
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  23968 agcttagttaaataacaaacagcaacataggcagtatgcaaa 23927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 38785 - 38704
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||||||| || ||| | ||||||||||| |||| ||||| || | ||| ||||||| ||||    
T  38785 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatct 38704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 128826 - 128917
Alignment:
Q  41 aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaatattcttcaagtaatg--cataatcattatatcacat 131  Q
    ||||| |||||||||||||||| || | ||| ||| |||||||||| |||| ||| ||| ||||||||||||  ||||| |||||||||||||    
T  128826 aaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgtacataa-cattatatcacat 128917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 501116 - 501246
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa--caacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||||| |||||||| || |||||| ||||  ||||||||||||||||||| || | ||| ||| |||| ||| |  ||| || |||    
T  501116 cagcttagttaaataacaa-cagcaacacag-caatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacata 501213  T
Q  99 ttcttcaagtaatgcata-atcattatatcaca 130  Q
    |  ||||||||||||||| || |||||||||||    
T  501214 taattcaagtaatgcatatataattatatcaca 501246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 160719 - 160761
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||    
T  160719 cagcttagttaaataacaatcagcaacataggcagtatgcaaa 160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2892 - 2808
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| || ||||| |||| ||||| || | ||| ||| ||||||||    
T  2892 cagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatct 2808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 947 - 827
Alignment:
Q  102 ttcaagtaatgcata-atcattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaacctcttcattaagtcttaatg 200  Q
    ||||||||||||| | | |||||||||||||| |||||  || ||||| |||||| ||||||||||| || |||| || | ||  |||||||||| |||     
T  947 ttcaagtaatgcacataacattatatcacatcgtaatcgacatcaacacatcttaaacagcttcacatatcataaatagcatcaccattaagtctcaata 848  T
Q  201 ctgcccaaaggttcaactctc 221  Q
    || ||  ||||||||||||||    
T  847 ctacctcaaggttcaactctc 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12801 - 12884
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatc 83  Q
    |||||||| ||||||||||||| ||||||||||||||| |||| || ||||| |||| |||||  | | ||| |||||||||||    
T  12801 cagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 12604 - 12687
Alignment:
Q  2 agcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||  |||||||||||||||||||| ||| | ||||| ||||| |||| ||||| || | ||| ||||||||||||    
T  12604 agcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1117 - 1159
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  1117 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6847 - 6889
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  6847 cagctcagttaaataacaaacagcaacataggcagtatgcaaa 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11499 - 11561
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatat 62  Q
    |||||||||||| |||||| |||||||||||||| ||| | ||||| ||||| ||||||||||    
T  11499 cagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatat 11561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6646 - 6688
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  6646 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 6688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14026 - 14068
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  14026 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 14068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6209 - 6167
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||    
T  6209 cagcttagttaaataacaaacagtaacataggcagtatgcaaa 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38342 - 38280
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatat 62  Q
    |||||||||||| |||||| |||||||||||||| ||| | ||||| ||||| ||||||||||    
T  38342 cagcttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatat 38280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32571 - 32633
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc-aaacaacatgacataataatat 62  Q
    ||||||||||||  |||||||||||||||||||| ||| | ||||||||||| |||| |||||    
T  32571 cagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatat 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15863 - 15821
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa 43  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  15863 cagcttagttaaataacaaacaacaacataggcagtatgcaaa 15821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4726 - 4856
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattc--aaacaacatgacataataatataaatttcaattcatcaacatcttagatatacaaata 98  Q
    ||||||||||||||||| |||||||||| | ||| ||| |  |||||||||||||||||||||| || | ||| ||| |||| ||| |  ||| || |||    
T  4726 cagcttagttaaataac-aacagcaacaca-gcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacata 4823  T
Q  99 ttcttcaagtaatgcata-atcattatatcaca 130  Q
    |  ||||||||||||||| || |||||||||||    
T  4824 taattcaagtaatgcatatataattatatcaca 4856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5678 - 5711
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    ||||||||| ||||||||||||||||||||||||    
T  5678 cagcttagtaaaataacaaacagcaacataggca 5711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2731 - 2698
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  2731 cagcttagttaaataacaaacatcaacataggca 2698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 62233 - 62266
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  62233 cagcttagttaaacaacaaacagcaacataggca 62266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 129943 - 130024
Alignment:
Q  4 cttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatct 84  Q
    ||||||||||||||| ||||||||||||||| ||| |||| || ||||| |||| |||||  | | ||| ||||||||||||    
T  129943 cttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 130024  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14783 - 14750
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggca 34  Q
    |||||||||||| |||||||||||||||||||||    
T  14783 cagcttagttaactaacaaacagcaacataggca 14750  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22756 - 22672
Alignment:
Q  1 cagcttagttaaataacaaacagcaacataggcaatattcaaa-caacatgacataataatataaatttcaattcatcaacatct 84  Q
    |||||||||||||||||||||||| |||||| || ||| |||| || ||||| |||| |||||  | | ||| ||||||||||||    
T  22756 cagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22672  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 69930 - 70000
Alignment:
Q  102 ttcaagtaatgca--taatcattatatcacatcataatcatcaacaacatatcttatacagcttcacagatt 171  Q
    |||||||||||||  ||||||||||||||||||||| ||| ||  ||||| || || |||||||||||||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcata-acagcttcacagatt 70000  T

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