View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14947_high_7 (Length: 269)
Name: NF14947_high_7
Description: NF14947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14947_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 250
Target Start/End: Original strand, 43615135 - 43615364
Alignment:
| Q |
21 |
tgtgactgtgtgaagaataatataatcgacccataagtagatgtagggcatgaatgatctaactgagatcaaaattctgaaacaacatggtgcaatcctg |
120 |
Q |
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| T |
43615135 |
tgtgactgtgtgaagaataatataatcgacccataagtagatgtagggcatgcatgatctaactgagatcaaaattctgaaacaacatggtgcaatcctg |
43615234 |
T |
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| Q |
121 |
agcaatcttgagtagggtagatttcaagaacagtgaaatcacagtggggcaggtaagaaaatgaaggaggagtaatgaaggactgcatggagcgttgtgg |
220 |
Q |
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| T |
43615235 |
agcaatcttgagtagggtagattgcaagaacagtgaaatcacagtggggcaggtaagaaaatgaaggaggagtaatgaaggactgcatggagcgttgtgg |
43615334 |
T |
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| Q |
221 |
gcaaggtattgaaaattgaaagggaataga |
250 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
43615335 |
gcaaggtattgaaaattgaaagggaataga |
43615364 |
T |
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