View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14949_low_18 (Length: 222)
Name: NF14949_low_18
Description: NF14949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14949_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 31894497 - 31894701
Alignment:
| Q |
1 |
ggattgagtttccaaaatattacatatgagatgaaacattcatatgacctttatgtatttcatgaaatcacaaaggtatgaactatgaatatgtttccac |
100 |
Q |
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| T |
31894497 |
ggattgagtttccaaaatattacatatgagatgaaacattcatatgacctttatgtaggtcatgaaatcacaaaggtatgaactatgaatatgtttcaac |
31894596 |
T |
|
| Q |
101 |
tattactttgaagaggatttgaccaaatgcttccagagataacgaccagaagccatgtcaataaatgtccaaaaccatgattctaatgcagccttaacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31894597 |
tattactttgaagaggatttgaccaaatgcttccagagataacgaccagaagccatgtcaataaatgtccaaaaccatgattctaatgcagccttaacct |
31894696 |
T |
|
| Q |
201 |
gttgt |
205 |
Q |
| |
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||||| |
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| T |
31894697 |
gttgt |
31894701 |
T |
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