View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14949_low_19 (Length: 220)

Name: NF14949_low_19
Description: NF14949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14949_low_19
NF14949_low_19
[»] chr4 (26 HSPs)
chr4 (1-220)||(18855571-18855785)
chr4 (1-220)||(5732506-5732723)
chr4 (1-220)||(9224434-9224647)
chr4 (1-220)||(9229221-9229434)
chr4 (1-220)||(51520301-51520515)
chr4 (1-220)||(56146738-56146952)
chr4 (1-220)||(3813868-3814082)
chr4 (1-220)||(45347844-45348058)
chr4 (1-220)||(45357323-45357537)
chr4 (2-220)||(24741788-24741998)
chr4 (163-220)||(29760642-29760699)
chr4 (163-220)||(28468568-28468625)
chr4 (2-105)||(29760490-29760592)
chr4 (162-220)||(10047378-10047437)
chr4 (162-220)||(36315268-36315327)
chr4 (162-220)||(36329477-36329536)
chr4 (162-220)||(38152478-38152537)
chr4 (162-220)||(39245993-39246052)
chr4 (163-220)||(5396710-5396768)
chr4 (164-220)||(5143260-5143317)
chr4 (162-220)||(5269230-5269289)
chr4 (162-220)||(16623332-16623391)
chr4 (163-220)||(31985673-31985730)
chr4 (163-219)||(3796559-3796616)
chr4 (164-220)||(5147678-5147735)
chr4 (184-220)||(24333831-24333867)
[»] chr6 (21 HSPs)
chr6 (1-220)||(6438345-6438559)
chr6 (1-220)||(28155596-28155811)
chr6 (1-220)||(28184347-28184563)
chr6 (1-220)||(14737603-14737817)
chr6 (1-220)||(14742463-14742676)
chr6 (1-220)||(6005262-6005475)
chr6 (1-220)||(22010724-22010937)
chr6 (1-220)||(11856816-11857032)
chr6 (1-220)||(16838589-16838802)
chr6 (1-220)||(33330472-33330687)
chr6 (1-220)||(33335969-33336184)
chr6 (1-208)||(5343325-5343527)
chr6 (164-220)||(5674809-5674865)
chr6 (2-105)||(30125940-30126044)
chr6 (163-220)||(5757517-5757575)
chr6 (163-220)||(21356036-21356094)
chr6 (162-220)||(10077204-10077263)
chr6 (162-220)||(31086512-31086571)
chr6 (162-220)||(31979512-31979571)
chr6 (163-220)||(4629954-4630012)
chr6 (175-220)||(21801383-21801429)
[»] chr1 (28 HSPs)
chr1 (1-220)||(39445344-39445558)
chr1 (1-220)||(25445116-25445330)
chr1 (1-220)||(44023900-44024113)
chr1 (1-220)||(1055038-1055252)
chr1 (1-220)||(43988491-43988706)
chr1 (3-220)||(41398084-41398294)
chr1 (163-220)||(24202808-24202865)
chr1 (2-220)||(24787403-24787617)
chr1 (1-58)||(41386593-41386650)
chr1 (163-220)||(41390582-41390639)
chr1 (163-220)||(19358882-19358939)
chr1 (163-220)||(19361471-19361528)
chr1 (163-220)||(19380111-19380168)
chr1 (162-220)||(47703975-47704034)
chr1 (163-220)||(19072928-19072986)
chr1 (163-220)||(19120818-19120876)
chr1 (163-220)||(26644936-26644994)
chr1 (162-220)||(9476260-9476319)
chr1 (163-220)||(3281708-3281766)
chr1 (162-215)||(13598397-13598451)
chr1 (163-220)||(37069770-37069828)
chr1 (54-127)||(41390483-41390559)
chr1 (162-220)||(775671-775730)
chr1 (162-220)||(16124555-16124614)
chr1 (48-98)||(24202919-24202970)
chr1 (162-220)||(27104411-27104470)
chr1 (162-220)||(29651810-29651869)
chr1 (162-220)||(47098863-47098922)
[»] scaffold0464 (1 HSPs)
scaffold0464 (2-220)||(208-421)
[»] chr7 (28 HSPs)
chr7 (2-220)||(19992158-19992371)
chr7 (2-216)||(21812269-21812478)
chr7 (1-220)||(24024353-24024568)
chr7 (1-220)||(12396756-12396969)
chr7 (1-220)||(12406176-12406389)
chr7 (1-220)||(31109610-31109823)
chr7 (1-220)||(4866574-4866788)
chr7 (2-220)||(16879918-16880131)
chr7 (2-220)||(16884774-16884987)
chr7 (2-220)||(24261350-24261563)
chr7 (2-220)||(24266229-24266442)
chr7 (2-220)||(20357586-20357797)
chr7 (2-220)||(2057806-2058023)
chr7 (163-220)||(18408764-18408821)
chr7 (163-220)||(21639809-21639866)
chr7 (163-220)||(1533483-1533540)
chr7 (163-220)||(18413641-18413697)
chr7 (163-220)||(21646007-21646064)
chr7 (164-220)||(21983285-21983342)
chr7 (162-220)||(9190047-9190106)
chr7 (162-220)||(20284088-20284147)
chr7 (162-220)||(29159802-29159861)
chr7 (162-220)||(2580389-2580448)
chr7 (162-220)||(33332489-33332548)
chr7 (162-220)||(46516349-46516408)
chr7 (162-220)||(49091660-49091719)
chr7 (163-220)||(44848723-44848781)
chr7 (184-220)||(28617264-28617300)
[»] chr5 (31 HSPs)
chr5 (1-220)||(28807599-28807815)
chr5 (2-220)||(37556649-37556863)
chr5 (2-220)||(37561471-37561685)
chr5 (1-220)||(43592123-43592337)
chr5 (1-220)||(43598568-43598782)
chr5 (1-220)||(43604060-43604274)
chr5 (1-220)||(43609552-43609766)
chr5 (1-220)||(2785220-2785433)
chr5 (1-220)||(1457189-1457402)
chr5 (1-220)||(27444814-27445028)
chr5 (1-220)||(27449658-27449872)
chr5 (1-220)||(33791161-33791374)
chr5 (1-220)||(31397020-31397233)
chr5 (1-220)||(31401877-31402090)
chr5 (1-220)||(33768024-33768237)
chr5 (5-220)||(15044535-15044744)
chr5 (1-220)||(30631252-30631464)
chr5 (79-220)||(31180138-31180272)
chr5 (163-220)||(38192174-38192231)
chr5 (163-220)||(38219399-38219456)
chr5 (163-216)||(24135849-24135902)
chr5 (163-220)||(35387663-35387720)
chr5 (163-220)||(9353371-9353429)
chr5 (163-220)||(36932389-36932447)
chr5 (162-218)||(17004001-17004058)
chr5 (163-220)||(10281751-10281809)
chr5 (163-220)||(15464532-15464590)
chr5 (164-220)||(11917011-11917068)
chr5 (162-220)||(28832258-28832317)
chr5 (162-215)||(42127454-42127508)
chr5 (163-218)||(14520230-14520286)
[»] chr8 (28 HSPs)
chr8 (2-220)||(39784849-39785063)
chr8 (1-220)||(6311142-6311355)
chr8 (1-220)||(7289953-7290167)
chr8 (1-220)||(35745236-35745449)
chr8 (1-220)||(25328305-25328518)
chr8 (2-220)||(30655488-30655704)
chr8 (2-220)||(10684291-10684504)
chr8 (2-220)||(33037845-33038056)
chr8 (2-220)||(4760114-4760325)
chr8 (2-220)||(36979225-36979435)
chr8 (163-220)||(10689182-10689239)
chr8 (163-220)||(18853207-18853264)
chr8 (163-220)||(26287902-26287959)
chr8 (163-220)||(26301159-26301216)
chr8 (163-220)||(26313153-26313210)
chr8 (163-220)||(18870601-18870658)
chr8 (163-220)||(1261993-1262050)
chr8 (162-220)||(26403269-26403328)
chr8 (2-105)||(18853314-18853418)
chr8 (184-220)||(4456050-4456086)
chr8 (165-220)||(9765858-9765914)
chr8 (162-220)||(4696635-4696694)
chr8 (2-105)||(18870708-18870809)
chr8 (2-105)||(10689289-10689392)
chr8 (163-220)||(31071268-31071326)
chr8 (166-220)||(7412344-7412399)
chr8 (163-220)||(19175793-19175851)
chr8 (162-213)||(5702529-5702581)
[»] chr3 (41 HSPs)
chr3 (1-220)||(18656276-18656493)
chr3 (1-220)||(22173222-22173435)
chr3 (1-220)||(2677114-2677328)
chr3 (1-220)||(2672958-2673172)
chr3 (1-211)||(10207778-10207983)
chr3 (1-220)||(8512060-8512275)
chr3 (1-220)||(8516940-8517155)
chr3 (6-220)||(24967957-24968165)
chr3 (2-220)||(7167092-7167302)
chr3 (2-220)||(2671625-2671836)
chr3 (2-220)||(32475330-32475543)
chr3 (1-220)||(28503903-28504105)
chr3 (2-220)||(32480188-32480401)
chr3 (163-220)||(8477363-8477420)
chr3 (163-220)||(8739102-8739159)
chr3 (163-220)||(9091340-9091397)
chr3 (163-220)||(40372834-40372891)
chr3 (163-220)||(1305949-1306006)
chr3 (163-220)||(26928630-26928687)
chr3 (163-220)||(8370515-8370573)
chr3 (162-219)||(21711222-21711280)
chr3 (163-220)||(27974981-27975039)
chr3 (163-220)||(27986475-27986533)
chr3 (162-220)||(18552912-18552971)
chr3 (163-220)||(16264350-16264408)
chr3 (163-220)||(25795781-25795839)
chr3 (163-220)||(30709819-30709877)
chr3 (163-220)||(32143321-32143379)
chr3 (163-220)||(33386695-33386753)
chr3 (164-220)||(36029094-36029151)
chr3 (162-213)||(1417526-1417578)
chr3 (166-220)||(1736334-1736389)
chr3 (162-220)||(3716031-3716090)
chr3 (4-67)||(40372981-40373043)
chr3 (162-220)||(40592811-40592870)
chr3 (163-220)||(27452958-27453016)
chr3 (162-215)||(47923940-47923994)
chr3 (2-67)||(8739250-8739314)
chr3 (2-67)||(9091488-9091552)
chr3 (184-220)||(6794742-6794778)
chr3 (184-220)||(48438236-48438272)
[»] scaffold0355 (2 HSPs)
scaffold0355 (1-220)||(9669-9880)
scaffold0355 (21-127)||(3-107)
[»] chr2 (22 HSPs)
chr2 (2-220)||(39812015-39812227)
chr2 (1-220)||(44312651-44312864)
chr2 (2-220)||(19344266-19344479)
chr2 (2-220)||(19349124-19349337)
chr2 (1-220)||(32246629-32246846)
chr2 (4-220)||(14291337-14291546)
chr2 (2-220)||(11098966-11099176)
chr2 (2-220)||(9296440-9296651)
chr2 (163-220)||(3491751-3491808)
chr2 (163-220)||(25398496-25398553)
chr2 (163-220)||(25403634-25403691)
chr2 (162-220)||(8040059-8040118)
chr2 (163-220)||(40738844-40738900)
chr2 (162-220)||(10445483-10445542)
chr2 (166-220)||(13569331-13569386)
chr2 (162-220)||(14699046-14699105)
chr2 (162-220)||(21629943-21630001)
chr2 (162-220)||(34682373-34682432)
chr2 (163-220)||(28259216-28259274)
chr2 (162-213)||(17865202-17865254)
chr2 (162-213)||(20522219-20522271)
chr2 (164-220)||(34388859-34388916)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-220)||(35089-35302)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-220)||(19192-19405)
scaffold0197 (2-220)||(14336-14549)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-220)||(148983-149196)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-220)||(2278-2491)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-220)||(181991-182204)
[»] scaffold0188 (2 HSPs)
scaffold0188 (163-220)||(17991-18048)
scaffold0188 (163-220)||(24084-24141)
[»] scaffold0978 (1 HSPs)
scaffold0978 (2-105)||(382-487)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-58)||(34132-34189)
[»] scaffold0140 (1 HSPs)
scaffold0140 (163-220)||(8458-8516)
[»] scaffold0036 (1 HSPs)
scaffold0036 (164-220)||(85684-85741)
[»] scaffold0479 (1 HSPs)
scaffold0479 (6-41)||(13198-13233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (162-215)||(5682-5736)
[»] scaffold0148 (1 HSPs)
scaffold0148 (162-220)||(10728-10787)
[»] scaffold0098 (1 HSPs)
scaffold0098 (185-220)||(45276-45311)
[»] scaffold0087 (1 HSPs)
scaffold0087 (163-220)||(44000-44058)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 18855571 - 18855785
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18855571 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 18855670  T
Q  101 aagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||    
T  18855671 aagagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct 18855765  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||||||||||    
T  18855766 gggggagagagcagctctcc 18855785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 5732506 - 5732723
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  5732506 tgatgtgtggagcaagtgatggtggtaatcaatgagaacaaatggtctccaagctaacaacaacaaaacagccctaagctagtgtatagtaaaaccacac 5732605  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    ||||||||||| ||||  |||||||||||||||| ||||||||||||         ||| || ||||||||||| |||||||||||||||||||||||||    
T  5732606 aaagagctaacaaagc--aaacaagataaacggt-aaaggaaagaac-aaaaaaaacactgaacaagattgttgacccagttcagccaatatggcctaat 5732701  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  5732702 ctgggggagagagcagctctcc 5732723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9224647 - 9224434
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  9224647 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacac 9224548  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| |||||||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  9224547 aaagagataccaaagca-aaacaagataagcggtaaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 9224456  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  9224455 ctgggggagagagcagctctcc 9224434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9229434 - 9229221
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  9229434 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacac 9229335  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| |||||||||| ||||||         ||||||| |||||||||  |||||||||||||||||||||||||    
T  9229334 aaagagataccaaagca-aaacaagataagcggtaaaagg-aagaac-----aaaacaccgag-aagattgttaacccagttcagccaatatggcctaat 9229243  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  9229242 ctgggggagagagcagctctcc 9229221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 51520301 - 51520515
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||| ||    
T  51520301 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccatac 51520400  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| |||||||||| |||||||| ||||||||||||||||    
T  51520401 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttctgccaatatggcctaat 51520493  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  51520494 ctgggggagagagcagctctcc 51520515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 56146952 - 56146738
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  56146952 tgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 56146853  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| ||||||||||  ||||||||||||||||||||||||    
T  56146852 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttggtccagttcagccaatatggcctaat 56146760  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  56146759 ctgggggagagagcagctctcc 56146738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 3813868 - 3814082
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagc-aaaaccaca 98  Q
    |||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||| |||||| ||||  ||||||||| || |||||||||    
T  3813868 tgatgtgtggagcaagtgatagtggtaatcaatgagagcaaatggtctccaagcaaacaacaacaaaacagtcctagactagtgtatcgcaaaaaccaca 3813967  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||||||||||||||||||||||||||  |  | || | ||||||         ||||  |||||||||||| |||||||||||||||||||||||||    
T  3813968 caaagagctaacaagcataaacaagataa--gcaagaaaggaagaac-----aaaacaccatgcaagattgttgacccagttcagccaatatggcctaat 3814060  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  3814061 ctgggggagagagcagctctcc 3814082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 45348058 - 45347844
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||  | ||||| ||||||||| |||||| ||||  |||||||| |||||||||||||    
T  45348058 tgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtcttcaagctaacaacaacaaaacagtcctagactagtgtaaagcaaaaccacac 45347959  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||| |  | ||||| ||||||||||| |||||||||||||||||         ||||||| |||||||||| |||||||||||||||||||| ||||    
T  45347958 -aagagattccaaagcacaaacaagataagcggtaaaaggaaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcttaat 45347866  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  45347865 ctgggggagagagcagctctcc 45347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 45357537 - 45357323
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||  | ||||| ||||||||| |||||| ||||  |||||||| |||||||||||||    
T  45357537 tgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtcttcaagctaacaacaacaaaacagtcctagactagtgtaaagcaaaaccacac 45357438  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||| |  | ||||| ||||||||||| |||||||||||||||||         ||||||| |||||||||| |||||||||||||||||||| ||||    
T  45357437 -aagagattccaaagcacaaacaagataagcggtaaaaggaaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcataat 45357345  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  45357344 ctgggggagagagcagctctcc 45357323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 24741788 - 24741998
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||||||||  | |||||| |||||||||| ||||||||||  ||||||||  |||||||| |||||||||||||    
T  24741788 gatgtgtggagcaagagatagtggtaatcaatgaaca-aaatggtttccaagcaa-caacaacaaaaacagccctagactagtgtagagcaaaaccacac 24741885  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || ||| ||| ||||||||||| |   ||| |  ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  24741886 aaagagataccaaagca-aaacaagataagcaagaaagg--aagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaat 24741976  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  24741977 ctgggggagagagcagctctcc 24741998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 29760642 - 29760699
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29760642 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 29760699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 28468625 - 28468568
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||    
T  28468625 aagattgttgacccagttcagccaatatgacctaatctggaggagagagcagctctcc 28468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 29760490 - 29760592
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacaca 100  Q
    ||||||||||||||| ||||||| |||||||| |  | |||||| |||||||||| |||||||||| || |||||  |||||||| ||||||||||||||    
T  29760490 gatgtgtggagcaagagatagtggtaatcaataaaca-aaatggtttccaagcaa-caacaacaaaacaaccctagactagtgtagagcaaaaccacaca 29760587  T
Q  101 aagag 105  Q
    |||||    
T  29760588 aagag 29760592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 10047378 - 10047437
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  10047378 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 10047437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 36315327 - 36315268
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||| ||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  36315327 caagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 36315268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 36329536 - 36329477
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||| ||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  36329536 caagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 36329477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 38152537 - 38152478
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| | ||||||||||||||||||||||||||    
T  38152537 caagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctcc 38152478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 39245993 - 39246052
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  39245993 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 39246052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 5396768 - 5396710
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| |||||||||| |||||||||||||||||    
T  5396768 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctcc 5396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 5143260 - 5143317
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctcc 5143317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 5269289 - 5269230
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| || ||||| | |||||||| ||||||||||||||||||||||| ||||    
T  5269289 caagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctcc 5269230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 16623391 - 16623332
Alignment:
Q  162 caagattgttgtcccagttcagc-caatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| |  ||||||| |||||||||| |||||||||||||||||    
T  16623391 caagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctcc 16623332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 31985730 - 31985673
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| |||||||||||| |||||||||||||||    
T  31985730 aagattgttgacccagttcggtccaatatgacctaatctgggg-agagagcagctctcc 31985673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 3796616 - 3796559
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctc 219  Q
    |||||||||| |||||||| | |||||||| |||||| |||||||||||||| |||||    
T  3796616 aagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctc 3796559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 5147678 - 5147735
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||| | |||||||| |||||| |||||||| ||||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctcc 5147735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 24333831 - 24333867
Alignment:
Q  184 ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||| |||||| |||||||||||||||||||||    
T  24333831 ccaatatgacctaatttgggggagagagcagctctcc 24333867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 2e-97; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6438345 - 6438559
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6438345 tgatgtgtggagcaagtgatagtggtaatcaatgagaaccaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 6438444  T
Q  101 aagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  6438445 aagagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgtcccagttcagccaatatggcctaatct 6438539  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||||||||||    
T  6438540 gggggagagagcagctctcc 6438559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 28155811 - 28155596
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaag-ctagtgtatagcaaaaccaca 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  | ||||| |||||||||||| ||||| || | || ||||||||||||||||||    
T  28155811 tgatgtgtggagcaagtgatagtgataatcaatgagagcaaatggtcttcaagctaacaacaacaaaacagcc-tatgacttgtgtatagcaaaaccaca 28155713  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||         |||||| ||||||||||| ||||||||||||||| |||||||||    
T  28155712 ctaagagctaacaagcataaacaagataaacggtaaatggaaagaac-----aaaacaccgaacaagattgttgacccagttcagccaatgtggcctaat 28155618  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  28155617 ctgggggagagagcagctctcc 28155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28184347 - 28184563
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaac--aaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccac 97  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  28184347 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccac 28184446  T
Q  98 acaaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    || ||||| |  | ||||||||||||||||| |||||||| ||||||||         ||||||| |||||||||| |||||||||||||||||||||||    
T  28184447 ac-aagagattccaaagcataaacaagataagcggtaaaaagaaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggccta 28184539  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  28184540 atctgggggagagagcagctctcc 28184563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 14737817 - 14737603
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  14737817 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacac 14737718  T
Q  100 aaa-gagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    ||| ||| || ||| ||| ||||||||||| |||||||| ||||||||         ||||||| ||||||||||  |||||||||||||||||||||||    
T  14737717 aaaagagataccaaagca-aaacaagataagcggtaaaa-gaaagaac-----aaaacaccgag-aagattgttgatccagttcagccaatatggcctaa 14737626  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  14737625 tctgggggagagagcagctctcc 14737603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 14742676 - 14742463
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||  ||||||||||||||||||||||    
T  14742676 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcatacaacaacaaaacagccctagactagtgtatagcaaaaccacac 14742577  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| |||||||| ||||||||         ||||||| |||||||||| |||||||||||||||||| ||||||    
T  14742576 aaagagatatcaaagca-aaacaagataagcggtaaaa-gaaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatgacctaat 14742485  T
Q  199 ctgggggagagagcagctctcc 220  Q
     |||||||||||||||||||||    
T  14742484 ttgggggagagagcagctctcc 14742463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6005262 - 6005475
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  6005262 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 6005360  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  6005361 ctaagagctaacaagcat--acaagataaacgataaaaggaaaagaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 6005452  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  6005453 tctgggggagagagcagctctcc 6005475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 22010937 - 22010724
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| | ||||||  | ||||||||||||||||||||    
T  22010937 tgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagccgccctagacaagtgtatagcaaaaccacac 22010838  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| || ||||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  22010837 aaagagataccaaagca-aaacaagataagcgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 22010746  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  22010745 ctgggggagagagcagctctcc 22010724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 11856816 - 11857032
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  11856816 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacac 11856915  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| |||||||| || || ||||||| ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  11856916 aaagagataccaaagca-aaacaagacaagcgataaaagg-aagaac--aaaaaaacaccaag-aagattgttgacccagttcagccaatatggcctaat 11857010  T
Q  199 ctgggggagagagcagctctcc 220  Q
     |||||||||||||||||||||    
T  11857011 atgggggagagagcagctctcc 11857032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16838589 - 16838802
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||| ||||||||||||||||| ||||||| |||||  |||||||| | ||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  16838589 tgatatgtggagcaagtgatagagataatctatgagtgcaaatggccttcaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 16838687  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| |||||| ||| ||||         |||||||||||||||||| ||||||||||||||| |||| |||    
T  16838688 ctaagagctaacaagcat--acaagataaacgataaaagaaaacgaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcttaa 16838779  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  16838780 tctgggggagagagcagctctcc 16838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 33330687 - 33330472
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagc-aaaaccac 97  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||| ||||||||    
T  33330687 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaaccac 33330589  T
Q  98 acaaagagctaacaagcataaacaagataaacggt-aaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    || |||||||||||||||| ||||||||||||  | ||||| |||||||         |||| ||||||||||||| ||||||||||||||| |||||||    
T  33330588 actaagagctaacaagcat-aacaagataaaccatgaaaagaaaagaac------aaacaccaagcaagattgttgacccagttcagccaatgtggccta 33330496  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  33330495 atctgggggagagagcagctctcc 33330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 33336184 - 33335969
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatag-caaaaccac 97  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||| | ||||||||| |||||| |||||| ||| |||||||  ||||||||    
T  33336184 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaaactaacaacaacaaaacag-cctaagcctaatgtatagtaaaaaccac 33336086  T
Q  98 acaaagagctaacaagcataaacaagataaacggt-aaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    || |||||||||||||||| ||||||||||||  | ||||| |||||||         |||| ||||||||||||| ||||||||||||||| || ||||    
T  33336085 actaagagctaacaagcat-aacaagataaaccatgaaaagaaaagaac------aaacaccaagcaagattgttgacccagttcagccaatgtgaccta 33335993  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  33335992 atctgggggagagagcagctctcc 33335969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5343325 - 5343527
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagc-aaaaccac 97  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| |||  ||||||| ||||||||    
T  5343325 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaaagtatagcaaaaaccac 5343423  T
Q  98 acaaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    || ||||||||||||||||  |||||||||||| |||| | ||| ||||         |||||||||||||||||| ||||||||||||||| |||||||    
T  5343424 actaagagctaacaagcat--acaagataaacgataaaggaaaacgaac------aaacaccgagcaagattgttgacccagttcagccaatgtggccta 5343515  T
Q  197 atctgggggaga 208  Q
    |||| |||||||    
T  5343516 atctaggggaga 5343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 5674865 - 5674809
Alignment:
Q  164 agattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5674865 agattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 5674809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 30126044 - 30125940
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| | ||||||||||| |||||  |||||||  ||||||| ||| ||||||||  ||||||||  |||||||| |||||||||||||    
T  30126044 gatgtgtggagcaagaggtagtgataatctatgagc-caaatggtctccaagctaactacaacaaaaacagccctagactagtgtagagcaaaaccacac 30125946  T
Q  100 aaagag 105  Q
    ||||||    
T  30125945 aaagag 30125940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 5757575 - 5757517
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  5757575 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 5757517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 21356036 - 21356094
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| |||||||||| |||||||||||||||||    
T  21356036 aagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctcc 21356094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 10077263 - 10077204
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||| ||| | |||||||| ||||||||||||||||||||||| ||||    
T  10077263 caagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctcc 10077204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 31086571 - 31086512
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||||| ||||||||  ||||||| |||||||||||| ||||||    
T  31086571 caagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctcc 31086512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 31979512 - 31979571
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| | ||||||||||||||||||||| ||||    
T  31979512 caagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctcc 31979571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 4629954 - 4630012
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| | |||||||| |||||||| |||||||| ||| |||||||||||||||    
T  4629954 aagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctcc 4630012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 21801429 - 21801383
Alignment:
Q  175 ccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctcc 21801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 2e-97; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 39445344 - 39445558
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39445344 tgatgtgtggagcaagtgatagtgataatcaatgtgaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 39445443  T
Q  101 aagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||    
T  39445444 aagagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct 39445538  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||||||||||    
T  39445539 gggggagagagcagctctcc 39445558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 25445330 - 25445116
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25445330 tgatgtgtggagcaagcgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 25445231  T
Q  101 aagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||    
T  25445230 aagagctaacaagcgtaaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct 25445136  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||||||||||    
T  25445135 gggggagagagcagctctcc 25445116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44024113 - 44023900
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44024113 tgatgtgtggagcaactgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 44024014  T
Q  101 aagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||    
T  44024013 aagagctaacaagcataaacaagataaatggt-aaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct 44023920  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||||||||||    
T  44023919 gggggagagagcagctctcc 44023900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 1055252 - 1055038
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1055252 tgatgtgtggagcaagtgatagtgataatcaatgtgaacaaatgtcttccaagcttacaacaacaaacagccctaagctagtgtatagcaaaaccacaca 1055153  T
Q  101 aagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||    
T  1055152 aagagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct 1055058  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||| ||||||    
T  1055057 gggggagagagcaactctcc 1055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 43988706 - 43988491
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||| |||||||    
T  43988706 tgatgtgtggagcaagtgatagagataatctatgagagcaaatggcttccaagctaacaacaacaaaacag-cctaagcctaatgtatagcacaaccaca 43988608  T
Q  99 caaagagctaacaagcataaacaagataaa--cggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    | ||||||||||||||||  ||||||||||  |   ||||| |||||||         |||| ||||||||||||  ||||||||||||||| |||||||    
T  43988607 ctaagagctaacaagcat--acaagataaaaccatgaaaagaaaagaac-----aaaacaccaagcaagattgtttacccagttcagccaatgtggccta 43988515  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  43988514 atctgggggagagagcagctctcc 43988491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 41398084 - 41398294
Alignment:
Q  3 atgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac----aaacagccctaagctagtgtatagc--aaaacca 96  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||    |||||||||||| ||||||||||||  |||||||    
T  41398084 atgtgtggagcaagtgatagtgataatcaatgagaacatatggtctccaagcaaacaacaacaacaaaacagccctaa-ctagtgtatagcaaaaaacca 41398182  T
Q  97 cacaaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcct 195  Q
    ||||||||| || | ||||||||||||||||      | |||| ||||||         ||||||| |||||||||| ||||| ||||||||||||||||    
T  41398183 cacaaagagataccaaagcataaacaagata------agaagg-aagaac-----aaaacaccgag-aagattgttgacccaggtcagccaatatggcct 41398269  T
Q  196 aatctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||||    
T  41398270 aatctgggggagagagcagctctcc 41398294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 24202865 - 24202808
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24202865 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 24202808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 24787617 - 24787403
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaa-----acaacaacaaacagccctaagctagtgtatagcaaaacca 96  Q
    ||||||||||||||| ||||||| |||| |||||| | |||||| ||||||||||     ||||||| |||||||||||  ||  |||| ||||||||||    
T  24787617 gatgtgtggagcaagagatagtggtaataaatgagca-aaatggtttccaagcaacaacaacaacaaaaaacagccctagacttatgtagagcaaaacca 24787519  T
Q  97 cacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcct 195  Q
    ||||||||| |||||| |||  |||||||||| |   |||||||| ||||         |||| || |||||||||| ||||||||||||||||||||||    
T  24787518 cacaaagagataacaaagca--aacaagataagcaagaaaaggaa-gaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcct 24787428  T
Q  196 aatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||||||||||||    
T  24787427 aatctgggggggagagcagctctcc 24787403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41386593 - 41386650
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaac 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  41386593 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaac 41386650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 41390582 - 41390639
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  41390582 aagattgttgacccagatcagccaatatggcctaatctgggggagagagcagctctcc 41390639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19358939 - 19358882
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||    
T  19358939 aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctcc 19358882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19361528 - 19361471
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||    
T  19361528 aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctcc 19361471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19380168 - 19380111
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||    
T  19380168 aagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctcc 19380111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 47704034 - 47703975
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  47704034 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 47703975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 19072928 - 19072986
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  19072928 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 19072986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 19120818 - 19120876
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  19120818 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 19120876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 26644994 - 26644936
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  26644994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 26644936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 9476260 - 9476319
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| |||||||| |||||||||||||||||||    
T  9476260 caagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctcc 9476319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 3281708 - 3281766
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||| ||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  3281708 aagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 3281766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 13598397 - 13598451
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagc 215  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||||    
T  13598397 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagc 13598451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 37069770 - 37069828
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||| ||||||    
T  37069770 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctcc 37069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 41390483 - 41390559
Alignment:
Q  54 caaacaacaacaaa-cagccctaagctagtgtatagcaaaa--ccacacaaagagctaacaa-gcataaacaagataa 127  Q
    |||||||||||||| ||||||||| ||||||||||||||||  |||||||||||| || ||| |||||||||||||||    
T  41390483 caaacaacaacaaaacagccctaa-ctagtgtatagcaaaaaaccacacaaagagatatcaaagcataaacaagataa 41390559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 775671 - 775730
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||| ||| | |||||||| ||||||||||||||||||| ||||||||    
T  775671 caagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctcc 775730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 16124614 - 16124555
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| | |||||| | |||||||| ||||||||||||||||||||||| ||||    
T  16124614 caagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctcc 16124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 24202970 - 24202919
Alignment:
Q  48 tccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||| ||||||    
T  24202970 tccaagcaaacaacaacaaaacagccctaaactagtgtagagcaacaccaca 24202919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 27104470 - 27104411
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| | |||||| | |||||||  ||||||||||||||||||||||||||||    
T  27104470 caagattgttgacacagttcggtccaatataacctaatctgggggagagagcagctctcc 27104411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 29651810 - 29651869
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||| ||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  29651810 caagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactcc 29651869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 47098922 - 47098863
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| || |||||||||||||||||||| ||||    
T  47098922 caagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctcc 47098863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 208 - 421
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  208 gatgtgtggagcaagtgatggtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 307  T
Q  102 agagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatctg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||||    
T  308 agagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctg 402  T
Q  202 ggggagagagcagctctcc 220  Q
    |||||||||||||||||||    
T  403 ggggagagagcagctctcc 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 19992158 - 19992371
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  19992158 gatgtgtggagcaggtgatagtgataatcaatgagaacaaatggcttccaagcttacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 19992257  T
Q  102 agagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatctg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19992258 agagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctg 19992352  T
Q  202 ggggagagagcagctctcc 220  Q
    |||||||||||||||||||    
T  19992353 ggggagagagcagctctcc 19992371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 21812478 - 21812269
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 101  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21812478 gatgtgtggagcaagagatagtggtaatctatgagagcaaatggcttccaagctaacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 21812379  T
Q  102 agagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatctg 201  Q
    |||| ||||||||||||||||||||||||||||||| |||||||         |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  21812378 agagttaacaagcataaacaagataaacggtaaaagaaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctg 21812284  T
Q  202 ggggagagagcagct 216  Q
    |||||||||||||||    
T  21812283 ggggagagagcagct 21812269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 24024568 - 24024353
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||| || | ||||| |||||||||||||||    
T  24024568 tgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagcc-tatgactagtatatagcaaaaccaca 24024470  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    ||||||||||||||||||||||||||||| |   |||||| ||||||         |||||| ||||||||||| |||||||||||||||||||||||||    
T  24024469 caaagagctaacaagcataaacaagataagcaagaaaagg-aagaac----aaaaacaccgaacaagattgttgacccagttcagccaatatggcctaat 24024375  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  24024374 ctgggggagagagcagctctcc 24024353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12396756 - 12396969
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  12396756 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 12396855  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| |||| ||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  12396856 aaagagataccaaagca-aaacaagataagcggt-aaagggaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 12396947  T
Q  199 ctgggggagagagcagctctcc 220  Q
    |||||||||||| |||||||||    
T  12396948 ctgggggagagaacagctctcc 12396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12406176 - 12406389
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  12406176 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 12406275  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| |||||||| ||||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  12406276 aaagagataccaaagca-aaacaagataagcggtaaaa-gaaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 12406367  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||  ||||||||    
T  12406368 ctgggggagagaatagctctcc 12406389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 31109823 - 31109610
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  31109823 tgatgtgtgcagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaacaaaacagccctaa-ctagtgtatagcaaaaccacac 31109725  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||| |  | |||||||||||||||||||   |||||| ||||||         |||||| ||||||||||| |||||||||||||||||||||||||    
T  31109724 -aagagattccaaagcataaacaagataaacaagaaaagg-aagaac-----aaaacaccgaacaagattgttgacccagttcagccaatatggcctaat 31109632  T
Q  199 ctgggggagagagcagctctcc 220  Q
    || |||||||||||||||||||    
T  31109631 ctaggggagagagcagctctcc 31109610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 4866574 - 4866788
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagc-aaaaccaca 98  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||  ||||||||||||||||| |||||| ||||  |||||||||||| |||||||||    
T  4866574 tgatgtgtggagcaagagatagtggtaatcaatgaggacaaatggtctccaagcaaacaacaacaaaacagtcctagactagtgtatagcaaaaaccaca 4866673  T
Q  99 caaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    |||| || || | ||||| ||||||||||| |||||||||| ||||||         ||||||| |||||||||| ||||||||||||||||||||||||    
T  4866674 caaaaagataccaaagca-aaacaagataagcggtaaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaa 4866765  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  4866766 tctgggggagagagcagctctcc 4866788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 16879918 - 16880131
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  16879918 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 16880015  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  16880016 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 16880108  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  16880109 tctgggggagagagcagctctcc 16880131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 16884774 - 16884987
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  16884774 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 16884871  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  16884872 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 16884964  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  16884965 tctgggggagagagcagctctcc 16884987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 24261563 - 24261350
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  24261563 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 24261466  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  24261465 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 24261373  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  24261372 tctgggggagagagcagctctcc 24261350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 24266442 - 24266229
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  24266442 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 24266345  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||| | ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  24266344 ctaagagctaacaagcata--caagataaacgataaaggaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 24266252  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  24266251 tctgggggagagagcagctctcc 24266229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 20357797 - 20357586
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||  |||||||  ||||||| ||||||||||||  ||||||||  |||||||| |||||||||||||    
T  20357797 gatgtgtggagcaagagatagtggtaatctatgagc-caaatggtctccaagctaacaacaacaaaaacagccctagactagtgtagagcaaaaccacac 20357699  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||||| |||  |||||||||| |   |||||||| ||||          ||| || |||||||||| |||||||||||||||||||||||||    
T  20357698 aaagagataacaaagca--aacaagataagcaagaaaaggaa-gaacaaaat-----accaag-aagattgttgacccagttcagccaatatggcctaat 20357608  T
Q  199 ctgggggagagagcagctctcc 220  Q
     |||||||||||||||||||||    
T  20357607 ttgggggagagagcagctctcc 20357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 2057806 - 2058023
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaaca--gccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||  ||||||| ||||||||||||||||||||| |  ||||||  || || || |||||||||||||    
T  2057806 gatgtgtggagcaagagatagtggtaatctatgagt-caaatggtttccaagcaaacaacaacaaaaaccgccctagacttgtttagagcaaaaccacac 2057904  T
Q  100 aaagagctaacaa-gcataaa----caagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcc 194  Q
    |||||| || ||| ||| |||    |||||||| |  ||||||||| ||||         |||| || |||||||||| |||||||||||||||||||||    
T  2057905 aaagagataccaaagcaaaaaaaaacaagataagcaataaaaggaa-gaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcc 2057997  T
Q  195 taatctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||||    
T  2057998 taatctgggggagagagcagctctcc 2058023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 18408764 - 18408821
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18408764 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 18408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 21639809 - 21639866
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21639809 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 21639866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 1533540 - 1533483
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  1533540 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcatctctcc 1533483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 18413641 - 18413697
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18413641 aagattgttgacccagttcagccaatatggcctaatct-ggggagagagcagctctcc 18413697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 21646007 - 21646064
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  21646007 aagattgttgacccagttcagccaatatggcctaatctagggaagagagcagctctcc 21646064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 21983285 - 21983342
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 21983342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 9190106 - 9190047
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| |||| |||||||||||||||||||||||    
T  9190106 caagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctcc 9190047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 20284088 - 20284147
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  20284088 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 20284147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 29159802 - 29159861
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| |||||||| |||||||||||||||||||    
T  29159802 caagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctcc 29159861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 2580389 - 2580448
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||| ||| | |||||||| |||| |||||||||||||||||||||||    
T  2580389 caagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctcc 2580448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 33332548 - 33332489
Alignment:
Q  162 caagattgttgtcccagttc-agccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | | |||||| ||||||||||||||||||||||| ||||    
T  33332548 caagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctcc 33332489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 46516408 - 46516349
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| |||||||| |||||||||||||| ||||    
T  46516408 caagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctcc 46516349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 49091660 - 49091719
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| ||||||| || |||||||| |||||||||||| |||||||| ||||||    
T  49091660 caagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctcc 49091719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 44848781 - 44848723
Alignment:
Q  163 aagattgttgtcccagttcagc-caatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| |  ||||||| ||||| ||||||||||||||||||||||    
T  44848781 aagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctcc 44848723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 28617300 - 28617264
Alignment:
Q  184 ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||| |||| |||||||||||||||||||||||    
T  28617300 ccaatatgacctactctgggggagagagcagctctcc 28617264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 28807815 - 28807599
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagc--aaaaccaca 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  28807815 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaaaccact 28807716  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||| |||||||||    
T  28807715 caaagagctaacaagcataaacaagataaacggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaat 28807621  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  28807620 ctgggggagagagcagctctcc 28807599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 37556863 - 37556649
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaag-ctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||| ||||| || | || |||||||||||||||||||    
T  37556863 gatgtgtggagcaagtgatagtgataatctatgagagcaaatggcctccaagctaacaacaacaaaacagcc-tatgacttgtgtatagcaaaaccacac 37556765  T
Q  100 aaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||         |||||||||||||||||| ||||||||||||||| ||||||||||    
T  37556764 taagagctaacaagcataaacaagataaacggtaaatggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatc 37556670  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  37556669 tgggggagagagcagctctcc 37556649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 37561685 - 37561471
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaag-ctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||| ||||| || | || |||||||||||||||||||    
T  37561685 gatgtgtggagcaagtgatagtgataatctatgagagcaaatggcctccaagctaacaacaacaaaacagcc-tatgacttgtgtatagcaaaaccacac 37561587  T
Q  100 aaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
     ||||||||||||||||||||||||||||||||||| |||||||||         |||||||||||||||||| ||||||||||||||| ||||||||||    
T  37561586 taagagctaacaagcataaacaagataaacggtaaatggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatc 37561492  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  37561491 tgggggagagagcagctctcc 37561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 43592123 - 43592337
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  43592123 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 43592222  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  43592223 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 43592315  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  43592316 ctgggggagagagcagctctcc 43592337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 43598568 - 43598782
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  43598568 tgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 43598667  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| ||||||||||  ||||||||||||||||||||||||    
T  43598668 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttggtccagttcagccaatatggcctaat 43598760  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  43598761 ctgggggagagagcagctctcc 43598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 43604060 - 43604274
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  43604060 tgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 43604159  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| ||||||||||  ||||||||||||||||||||||||    
T  43604160 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttggtccagttcagccaatatggcctaat 43604252  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  43604253 ctgggggagagagcagctctcc 43604274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 43609552 - 43609766
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  43609552 tgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 43609651  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| ||||||||||  ||||||||||||||||||||||||    
T  43609652 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttggtccagttcagccaatatggcctaat 43609744  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  43609745 ctgggggagagagcagctctcc 43609766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 2785220 - 2785433
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  2785220 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 2785318  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  2785319 ctaagagctaacaagcat--acaagataaacgataaaaggaaaagaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 2785410  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  2785411 tctgggggagagagcagctctcc 2785433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 1457402 - 1457189
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  1457402 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 1457303  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  |  | || | ||||||         ||||||| |||||||||| ||||||||||||||| |||||||||    
T  1457302 aaagagataacaaagcataaacaagataa--gaaagaaaggaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatgtggcctaat 1457211  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  1457210 ctgggggagagagcagctctcc 1457189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 27444814 - 27445028
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaaca-aacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||  |||||||||||||||||| | ||||||||  ||||||||||||||||||||||    
T  27444814 tgatgtgtggagcaagagatagtggtaatcaatgagtacaaatggtctccaagcaaacaacaacatagcagccctagactagtgtatagcaaaaccacac 27444913  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| |||||||||| |||||||||| |||||| |||||||    
T  27444914 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcaggcaatatagcctaat 27445006  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  27445007 ctgggggagagagcagctctcc 27445028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 27449658 - 27449872
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaaca-aacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||| ||||||||||| ||||||| ||||||||||| ||||||||  |||||||||||||||||| | ||||||||  ||||||||||||||||||||||    
T  27449658 tgatatgtggagcaagagatagtggtaatcaatgagtacaaatggtctccaagcaaacaacaacatagcagccctagactagtgtatagcaaaaccacac 27449757  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  | ||||||| ||||||         ||||||| |||||||||| ||||||||||||||||| |||||||    
T  27449758 aaagagataacaaagcataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatagcctaat 27449850  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  27449851 ctgggggagagagcagctctcc 27449872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 33791161 - 33791374
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  33791161 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 33791259  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
     | |||||||||||||||  |||||||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  33791260 tatagagctaacaagcat--acaagataaacgataaaaggaaaagaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 33791351  T
Q  198 tctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||||||||    
T  33791352 tctgggggaaagagcagctctcc 33791374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 31397233 - 31397020
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaag-ctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||||||    |||||| ||| |||| |||||||||||||    
T  31397233 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacatcctaagcctaatgtaaagcaaaaccacac 31397134  T
Q  100 aaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
     ||||||||||||||||  |||||||||||| |||||| ||| ||          |||||||||||||||||| ||||||||||||||| ||||||||||    
T  31397133 taagagctaacaagcat--acaagataaacgataaaagaaaacaa-----acaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatc 31397041  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  31397040 tgggggagagagcagctctcc 31397020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 31402090 - 31401877
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||| ||||||||||||    
T  31402090 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtaaagcaaaaccaca 31401992  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| |||||| ||| ||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  31401991 ctaagagctaacaagcat--acaagataaacgataaaagaaaacgaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 31401900  T
Q  198 tctgggggagagagcagctctcc 220  Q
    | |||||||||||||||||||||    
T  31401899 tatgggggagagagcagctctcc 31401877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 33768024 - 33768237
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||| | ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  33768024 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatgacctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 33768122  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
     | |||||||||||||||  ||| |||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  33768123 tatagagctaacaagcat--acaggataaacgataaaaggaaaagaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 33768214  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||| ||||||||||||||    
T  33768215 tctgggggggagagcagctctcc 33768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 15044535 - 15044744
Alignment:
Q  5 gtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacacaaag 103  Q
    |||| ||||||||||||||| ||||||||||||||||||||  ||||| | ||||||||| |||||||||||  |||||||||||||||||||||| |||    
T  15044535 gtgtagagcaagtgatagtggtaatcaatgagaacaaatggtctccaaaccaacaacaacaaaacagccctagactagtgtatagcaaaaccacac-aag 15044633  T
Q  104 agctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatctgg 202  Q
    || |  | ||||||||||||||||| |   |||||| ||||||         |||| || |||||||||| ||||||||||||||||||||||||| |||    
T  15044634 agattccaaagcataaacaagataagcaagaaaagg-aagaac-----aaaacaccaag-aagattgttgacccagttcagccaatatggcctaatatgg 15044726  T
Q  203 gggagagagcagctctcc 220  Q
    ||||||||||||||||||    
T  15044727 gggagagagcagctctcc 15044744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30631252 - 30631464
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||| || ||||| ||||||||| |||||||||||  |||||||||||||||| ||||     
T  30631252 tgatgtgtggagcaagagatagtggtaatctatgagaacaaatggttttcaagc-aacaacaacaaaacagccctagactagtgtatagcaaaatcacat 30631350  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaa-aaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | | || |||| |||||||||||||||||   |||| || | ||||||         |||| || |||||||||| | ||||||||||||| ||||||||    
T  30631351 atatagataacaaagcataaacaagataa---gtaagaaaggaagaac-----aaaacaccaag-aagattgttgactcagttcagccaatgtggcctaa 30631441  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  30631442 tctgggggagagagcagctctcc 30631464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 220
Target Start/End: Original strand, 31180138 - 31180272
Alignment:
Q  79 tagtgtatagcaaaaccacacaaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtccca 177  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||  |  | || ||||||||         |||| || |||||||||| ||||    
T  31180138 tagtgtatagcaaaaccacacaaagagataacaaagcataaacaagataa--gaaagaaagaaagaacaaaa-----caccaag-aagattgttgaccca 31180229  T
Q  178 gttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31180230 gttcagccaatatggcctaatctgggggagagagcagctctcc 31180272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 38192174 - 38192231
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38192174 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 38192231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 38219399 - 38219456
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38219399 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 38219456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 24135849 - 24135902
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagct 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24135849 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagct 24135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 35387663 - 35387720
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  35387663 aagattgttgacccaattcagccaatatggcctaatctgggggagagagcagctctcc 35387720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 9353429 - 9353371
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  9353429 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 9353371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 36932447 - 36932389
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  36932447 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 36932389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 17004058 - 17004001
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctct 218  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||    
T  17004058 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctct 17004001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 10281751 - 10281809
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||||||    
T  10281751 aagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctcc 10281809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 15464532 - 15464590
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | ||||||||  |||||||||||||||||||||||||||    
T  15464532 aagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctcc 15464590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 11917068 - 11917011
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||| | |||||||| |||||| |||||||||||||||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctcc 11917011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 28832258 - 28832317
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| ||| |||| | |||||||| ||||||||||||||||||||||| ||||    
T  28832258 caagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctcc 28832317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 42127508 - 42127454
Alignment:
Q  162 caagattgttgtcccagttc-agccaatatggcctaatctgggggagagagcagc 215  Q
    ||||||||||| |||||||| | | |||||| |||||||||||||||||||||||    
T  42127508 caagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagc 42127454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 14520230 - 14520286
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctct 218  Q
    |||||||||| |||||||| | |||||||| |||||||| |||| ||||||||||||    
T  14520230 aagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctct 14520286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 39785063 - 39784849
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||| |||||||||||||||||||||||||||||||||||     
T  39785063 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaataacaacaaaacagccctaagctagtgtatagcaaaaccacac- 39784965  T
Q  101 aagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
    ||||| |  | ||||| ||||||||||| |||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||    
T  39784964 aagagattccaaagcacaaacaagataagcggtaaaaggaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatatggcctaatc 39784870  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  39784869 tgggggagagagcagctctcc 39784849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6311142 - 6311355
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  6311142 tgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtttccaagcaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 6311241  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||| |||| |||||||||||||||||  |  | || | ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  6311242 taagagataacaaagcataaacaagataa--gcaagaaaggaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 6311333  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  6311334 ctgggggagagagcagctctcc 6311355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 7290167 - 7289953
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  7290167 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaaacaaacaacaacaaagcagccctagactagtgtatagcaaaaccacac 7290068  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| || ||||||||||||||  | ||||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  7290067 aaagagataacaaaccataaacaagataagtgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 7289975  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  7289974 ctgggggagagagcagctctcc 7289953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 35745236 - 35745449
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  35745236 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 35745334  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  35745335 ctaagagctaacaagcat--acaagataaacgataaaaggaaaagaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 35745426  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  35745427 tctgggggagagagcagctctcc 35745449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 25328518 - 25328305
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||| |||||| ||||||||||||||||||||||    
T  25328518 tgatgtgcggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaacaaaacaaccctaa-ctagtgtatagcaaaaccacac 25328420  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||| || | || ||||||| |||||||||||||| | |||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  25328419 -aagagataccaaaacataaacgagataaacggtaaaggaaaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 25328327  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  25328326 ctgggggagagagcagctctcc 25328305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 30655488 - 30655704
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaa--acaacaacaaacagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||||||||  | |||||| ||||||||||  ||||||| |||||||||||  |||||||| |||||||||||||    
T  30655488 gatgtgtggagcaagagatagtggtaatcaatgaaca-aaatggtttccaagcaacaacaacaaaaaacagccctagactagtgtagagcaaaaccacac 30655586  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    | |||| |||| |||||||||||||||||  |  | || | ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  30655587 atagagataacaaagcataaacaagataa--gcaagaaaggaagaac-aaaaaaaacaccaag-aagattgttgacccagttcagccaatatggcctaat 30655682  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  30655683 ctgggggagagagcagctctcc 30655704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 10684504 - 10684291
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  10684504 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 10684407  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  10684406 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 10684314  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  10684313 tctgggggagagagcagctctcc 10684291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 33038056 - 33037845
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaa--acaacaacaaacagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||||||||  | |||||| ||||||||||  ||||||| |||||||||||  |||||||| |||||||||||||    
T  33038056 gatgtgtggagcaagagatagtggtaatcaatgaaca-aaatggtttccaagcaacaacaacaataaacagccctagactagtgtagagcaaaaccacac 33037958  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || ||| ||| ||||||||||| |   |||||  ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  33037957 aaagagataccaaagca-aaacaagataagcaagaaaag--aagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaat 33037867  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  33037866 ctgggggagagagcagctctcc 33037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 4760325 - 4760114
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||| || ||||||| ||||||||||| | |||||| |||||||||| ||||||||||  ||||||||  |||||||| |||||||||||||    
T  4760325 gatgtgtggagctagagatagtggtaatcaatgagca-aaatggtttccaagcaa-caacaacaaaaacagccctagactagtgtagagcaaaaccacac 4760228  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||||||  |  | || | ||||||         || | || |||||||||| |||||||||||||||||||||||||    
T  4760227 aaagagataacaaagcataaacaagataa--gcaagaaaggaagaac-----aaaacatcaag-aagattgttgacccagttcagccaatatggcctaat 4760136  T
Q  199 ctgggggagagagcagctctcc 220  Q
     |||||||||||||||||||||    
T  4760135 atgggggagagagcagctctcc 4760114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 36979225 - 36979435
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||||||||  | |||||| |||||||||| ||||||||||  ||||||||  |||||||| |||||||||||||    
T  36979225 gatgtgtggagcaagagatagtggtaatcaatgaaca-aaatggtttccaagcaa-caacaacaaaaacagccctagactagtgtagagcaaaaccacac 36979322  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || ||| ||| ||||||||||| |   ||| |  ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  36979323 aaagagataccaaagca-aaacaagataagcaagaaagg--aagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaat 36979413  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  36979414 ctgggggagagagcagctctcc 36979435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 10689239 - 10689182
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10689239 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 10689182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 18853264 - 18853207
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18853264 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 18853207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 26287902 - 26287959
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26287902 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 26287959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 26301159 - 26301216
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26301159 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 26301216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 26313153 - 26313210
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26313153 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 26313210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 18870658 - 18870601
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  18870658 aagattgttgacccagttcatccaatatggcctaatctgggggagagagcagctctcc 18870601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 1262050 - 1261993
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  1262050 aagattgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctcc 1261993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 26403328 - 26403269
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  26403328 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 26403269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18853418 - 18853314
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaaca--gccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||  ||||||| ||||||||||||||||| ||| |  ||||||  || || || |||||||||||||    
T  18853418 gatgtgtggagcaagagatagtggtaatctatgag-tcaaatggtttccaagcaaacaacaaaaaaaaacgccctagacttgtttagagcaaaaccacac 18853320  T
Q  100 aaagag 105  Q
    ||||||    
T  18853319 aaagag 18853314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 4456050 - 4456086
Alignment:
Q  184 ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  4456050 ccaatatggcctaatctgggggagagagcagctctcc 4456086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 9765914 - 9765858
Alignment:
Q  165 gattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 9765858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 4696694 - 4696635
Alignment:
Q  162 caagattgttgtcccagttc-agccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  4696694 caagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctcc 4696635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18870809 - 18870708
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaacagccctaagctagtgtatagcaaaaccacacaa 101  Q
    ||||||||||||||| |||| || ||||| |||||   |||||| ||||||||||||||||| |||| ||||||  || || || |||||||||||||||    
T  18870809 gatgtgtggagcaagagataatggtaatctatgagtt-aaatggtttccaagcaaacaacaaaaaac-gccctagacttgtttagagcaaaaccacacaa 18870712  T
Q  102 agag 105  Q
    ||||    
T  18870711 agag 18870708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 10689392 - 10689289
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||  | ||||| |||||||||| ||||||||||  || |||||   ||||||| |||||||||||||    
T  10689392 gatgtgtggagcaagagatagtggtaatctatgagt-ctaatggtttccaagcaa-caacaacaaaaacaaccctagtgtagtgtagagcaaaaccacac 10689295  T
Q  100 aaagag 105  Q
    ||||||    
T  10689294 aaagag 10689289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 31071326 - 31071268
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||    
T  31071326 aagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctcc 31071268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 7412344 - 7412399
Alignment:
Q  166 attgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||| |||||||| | |||||||| |||||| |||||||||||||||||||||    
T  7412344 attgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctcc 7412399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 19175851 - 19175793
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| || ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  19175851 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctcc 19175793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 5702581 - 5702529
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagca 213  Q
    ||||||||||| |||||||| | |||||||| |||||| ||||||||||||||    
T  5702581 caagattgttgacccagttcggtccaatatgacctaatatgggggagagagca 5702529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 18656276 - 18656493
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||| ||||||||||    
T  18656276 tgatgtgtggagcaagtgatggtggtaatcaatgagaacaaatggtctccaagctaacaacaacaaaacagccctaagctagtgtatagaaaaaccacac 18656375  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    ||||||||||| ||||  |||||||||||||||| ||||||||||||         ||| || ||||||||||| |||||||||||||||||||||||||    
T  18656376 aaagagctaacaaagc--aaacaagataaacggt-aaaggaaagaac-aaaaaaaacactgaacaagattgttgacccagttcagccaatatggcctaat 18656471  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  18656472 ctgggggagagagcagctctcc 18656493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 22173435 - 22173222
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  22173435 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacac 22173336  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||| ||||||| |||||||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  22173335 aaagagataccaaagca-aaataagataagcggtaaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 22173244  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  22173243 ctgggggagagagcagctctcc 22173222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 2677328 - 2677114
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  2677328 tgatgtgtggagcaagtgatagagataatctatgagagcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 2677230  T
Q  99 caaagagctaacaagcataaacaagataaacggt-aaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||| ||||||||||||  | ||||| |||||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  2677229 ctaagagctaacaagcat-aacaagataaaccatgaaaagaaaagaac------aaacaccaagcaagattgttgacccagttcagccaatgtggcctaa 2677137  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  2677136 tctgggggagagagcagctctcc 2677114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 2673172 - 2672958
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| ||||||  ||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  2673172 tgatgtgtggagcaagtgatagagataatctatgagagtaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 2673074  T
Q  99 caaagagctaacaagcataaacaagataaacggt-aaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||| ||||||||||||  | ||||| |||||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  2673073 ctaagagctaacaagcat-aacaagataaaccatgaaaagaaaagaac------aaacaccaagcaagattgttgacccagttcagccaatgtggcctaa 2672981  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  2672980 tctgggggagagagcagctctcc 2672958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 10207778 - 10207983
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  10207778 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 10207876  T
Q  99 caaagagctaacaagcataaacaagataaacggt-aaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||| ||||||||||||  | ||||| |||||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  10207877 ctaagagctaacaagcat-aacaagataaaccatgaaaagaaaagaac------aaacaccaagcaagattgttgacccagttcagccaatgtggcctaa 10207969  T
Q  198 tctgggggagagag 211  Q
    ||||||||||||||    
T  10207970 tctgggggagagag 10207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 8512060 - 8512275
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||| ||| ||| ||||| |||||||    
T  8512060 tgatgtgtggagcaagtgatagagataatctatgagagcaaatggcttccaagctaacaacaacaaaacag-cctaagcctaatgtgtagcacaaccaca 8512158  T
Q  99 caaagagctaacaagcataaacaagat-aaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    | ||||| ||||||||||  ||||||| ||||| |||| | ||| ||||         |||||||||||||||||| ||||||||||||||| |||||||    
T  8512159 ctaagagttaacaagcat--acaagataaaacgataaacgaaaacgaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggccta 8512251  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  8512252 atctgggggagagagcagctctcc 8512275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 8516940 - 8517155
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||||| |||||| |||||| ||| ||| ||||| |||||||    
T  8516940 tgatgtgtggagcaagtgatagagataatctatgagagcaaatggcttccaagctaacaacaacaaaacag-cctaagcctaatgtgtagcacaaccaca 8517038  T
Q  99 caaagagctaacaagcataaacaagat-aaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
    | ||||| ||||||||||  ||||||| ||||| |||| | ||| ||||         |||||||||||||||||| ||||||||||||||| |||||||    
T  8517039 ctaagagttaacaagcat--acaagataaaacgataaacgaaaacgaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggccta 8517131  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  8517132 atctgggggagagagcagctctcc 8517155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 24967957 - 24968165
Alignment:
Q  6 tgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccacacaaag 103  Q
    ||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||| |||    
T  24967957 tgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccacactaag 24968055  T
Q  104 agctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatctgg 202  Q
    |||||||||||||  |||||||||||| |||||| ||| ||||         |||||||||||||||||| ||||||||||||||| |||| |||| | |    
T  24968056 agctaacaagcat--acaagataaacgataaaagaaaacgaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcttaattttg 24968147  T
Q  203 gggagagagcagctctcc 220  Q
    ||||||||| ||||||||    
T  24968148 gggagagagtagctctcc 24968165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 7167092 - 7167302
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacaca 100  Q
    ||||||||||||||| ||||||| ||||| ||||| | |||||| |||||||||| |||||||||| ||||||||  |||||||| ||||||||||||||    
T  7167092 gatgtgtggagcaagagatagtggtaatctatgagca-aaatggtttccaagcaa-caacaacaaaacagccctagactagtgtagagcaaaaccacaca 7167189  T
Q  101 aagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
    ||||| |||| |||||||||||||||||  |  | || | ||||||         |||| || |||||||||| ||||||||||||||||||||||||||    
T  7167190 aagagataacaaagcataaacaagataa--gcaagaaaggaagaac-----aaaacaccaag-aagattgttgacccagttcagccaatatggcctaatc 7167281  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  7167282 tgggggagagagcagctctcc 7167302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 2671836 - 2671625
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||  |||||||  ||||||||||||||||||||  ||||||||  |||||||| || ||||||||||    
T  2671836 gatgtgtggagcaagagatagtggtaatctatgagc-caaatggtctccaagcaaacaacaacaaaaacagccctagtctagtgtagagaaaaaccacac 2671738  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||||| ||| ||||||||||| |   ||| |  ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  2671737 aaagagataacaaagca-aaacaagataagcaagaaagg--aagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaat 2671647  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  2671646 ctgggggagagagcagctctcc 2671625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 32475330 - 32475543
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||| | || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  32475330 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaaactaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 32475427  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  32475428 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 32475520  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  32475521 tctgggggagagagcagctctcc 32475543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 28504105 - 28503903
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||  | ||||||||||| ||||||| |||||| |||||||||| |||||||||| |||||||   ||||||||||||||||||||||    
T  28504105 tgatgtgtggagcaaaaggtagtgataatctatgagaa-aaatggtttccaagcaa-caacaacaaaacagcccttgactagtgtatagcaaaaccacac 28504008  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||| |||||||||||||          ||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  28504007 aaagagataacaaagcataaacaag----------aaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 28503925  T
Q  199 ctgggggagagagcagctctcc 220  Q
    |||||| |||||||||||||||    
T  28503924 ctggggaagagagcagctctcc 28503903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 32480188 - 32480401
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||| | || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  32480188 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaaactaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 32480285  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| | ||||||||||| ||||||||||||||| ||||||||    
T  32480286 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaaccaagattgttgacccagttcagccaatgtggcctaa 32480378  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  32480379 tctgggggagagagcagctctcc 32480401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 8477363 - 8477420
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8477363 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 8477420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 8739159 - 8739102
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8739159 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 8739102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 9091397 - 9091340
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9091397 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 9091340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 40372891 - 40372834
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40372891 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 40372834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 1305949 - 1306006
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  1305949 aagattgttgacccagttcagccaatatggcctaatctaggggagatagcagctctcc 1306006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 26928687 - 26928630
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  26928687 aagattgttgacccagttcagccaatatgacctaatctgggggagagagcaactctcc 26928630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 8370573 - 8370515
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  8370573 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 8370515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 21711222 - 21711280
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctc 219  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||||||||    
T  21711222 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctc 21711280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 27975039 - 27974981
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  27975039 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 27974981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 27986533 - 27986475
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  27986533 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 27986475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 18552971 - 18552912
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  18552971 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 18552912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 16264350 - 16264408
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||    
T  16264350 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctcc 16264408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 25795781 - 25795839
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||    
T  25795781 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctcc 25795839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 30709877 - 30709819
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  30709877 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 30709819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 32143321 - 32143379
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||    
T  32143321 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctcc 32143379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 33386753 - 33386695
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||  ||||||| | |||||||| ||||||||||||||||||||||||||||    
T  33386753 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctcc 33386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 36029094 - 36029151
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||| | |||||||| |||||||||||||||| |||||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctcc 36029151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 1417578 - 1417526
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagca 213  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||    
T  1417578 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagca 1417526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 1736389 - 1736334
Alignment:
Q  166 attgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 1736334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 3716090 - 3716031
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| |||||||| || ||||||||||||||||    
T  3716090 caagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctcc 3716031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 40373043 - 40372981
Alignment:
Q  4 tgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa 67  Q
    ||||||||||||| ||||||| ||||||||| | | |||||| |||||||||||||||| ||||    
T  40373043 tgtgtggagcaagagatagtggtaatcaatgggca-aaatggtttccaagcaaacaacatcaaa 40372981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 40592870 - 40592811
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||| ||||||||| ||||||||    
T  40592870 caagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctcc 40592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 27452958 - 27453016
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||  ||||||| | |||||||| ||||||| ||||||||||||||||||||    
T  27452958 aagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctcc 27453016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 47923994 - 47923940
Alignment:
Q  162 caagattgttgtcccagttc-agccaatatggcctaatctgggggagagagcagc 215  Q
    ||||||||||| |||||||| | |||||||| |||||||| ||||||||||||||    
T  47923994 caagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagc 47923940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8739314 - 8739250
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa 67  Q
    |||||||||||||||  |||||| ||||| |||||  ||||||| ||||||||||| |||||||||    
T  8739314 gatgtgtggagcaagaaatagtggtaatctatgagt-caaatggtttccaagcaaataacaacaaa 8739250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 9091552 - 9091488
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa 67  Q
    |||||||||||||||  |||||| ||||| |||||  ||||||| ||||||||||| |||||||||    
T  9091552 gatgtgtggagcaagaaatagtggtaatctatgagt-caaatggtttccaagcaaataacaacaaa 9091488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 6794778 - 6794742
Alignment:
Q  184 ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||| |||||| |||||||||||||||||||||    
T  6794778 ccaatatgacctaatatgggggagagagcagctctcc 6794742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 48438236 - 48438272
Alignment:
Q  184 ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  48438236 ccaatatgacctaatctgggggagagagcagccctcc 48438272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9880 - 9669
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  9880 tgatgtgtggagcaagtgatagtgataatcaatgagagcaaatggtctccaaccaaacaacaacaaaacagccctaagctagtatatagcaaaaccacac 9781  T
Q  100 aaagagctaacaagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
     |||||||||||||||||||||||||||  |  | || | ||||||         ||||||| |||||||||| ||||||||||||||||||||||||||    
T  9780 -aagagctaacaagcataaacaagataa--gcaagaaaggaagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaatc 9690  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  9689 tgggggagagagcagctctcc 9669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 107 - 3
Alignment:
Q  21 agtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacacaaagagctaacaagcataaa 119  Q
    ||||||||||||||||| |||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  107 agtgataatcaatgagagcaaatggtctccaagtaaacaacaacaaaacagccctaagctagtgtatagcaaaaccacac---gagctaacaagcataaa 11  T
Q  120 caagataa 127  Q
    ||||||||    
T  10 caagataa 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 5e-55; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 39812227 - 39812015
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||||||     
T  39812227 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaacaaaacagccctaagctagtgtatagcaaaaccacac- 39812129  T
Q  101 aagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatc 199  Q
    ||||| |  | ||||| ||||||||||| |||||||| ||||||||         ||||||| ||||||||||  |||||||||||||||||||||||||    
T  39812128 aagagattccaaagcacaaacaagataagcggtaaaa-gaaagaac-----aaaacaccgag-aagattgttgaaccagttcagccaatatggcctaatc 39812036  T
Q  200 tgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||    
T  39812035 tgggggagagagcagctctcc 39812015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44312864 - 44312651
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa-cagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| | ||||||  | ||||||||||||||||||||    
T  44312864 tgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagccgccctagacaagtgtatagcaaaaccacac 44312765  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| || ||||||| ||||||         ||||||| |||||||||| |||||||||||||||||||||||||    
T  44312764 aaagagataccaaagca-aaacaagataagcgataaaagg-aagaac-----aaaacaccgag-aagattgttgacccagttcagccaatatggcctaat 44312673  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  44312672 ctgggggagagagcagctctcc 44312651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 19344266 - 19344479
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||| ||||||||| |||||| |||||| ||| ||||||||||||||||||    
T  19344266 gatgtgtggagcaagagatagtggtaatctatgagagcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccacac 19344364  T
Q  100 aaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||||||||||||||  |||||||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| |||||||||    
T  19344365 taagagctaacaagcat--acaagataaacgataaaaggaaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaat 19344457  T
Q  199 ctgggggagagagcagctctcc 220  Q
    || |||||||||||||||||||    
T  19344458 ctaggggagagagcagctctcc 19344479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 19349124 - 19349337
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||| ||||||||| |||||| |||||| ||| ||||||||||||||||||    
T  19349124 gatgtgtggagcaagagatagtggtaatctatgagagcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccacac 19349222  T
Q  100 aaagagctaacaagcataaacaagataaacggtaaaagg-aaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
     ||||||||||||||||  |||||||||||| ||||||| |||||||         |||||||||||||||||| ||||||||||||||| |||||||||    
T  19349223 taagagctaacaagcat--acaagataaacgataaaaggaaaagaac-----aaaacaccgagcaagattgttgacccagttcagccaatgtggcctaat 19349315  T
Q  199 ctgggggagagagcagctctcc 220  Q
    || |||||||||||||||||||    
T  19349316 ctaggggagagagcagctctcc 19349337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32246629 - 32246846
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||  ||||||| ||||||||| |||||| ||||  ||||||||||||||||||||||    
T  32246629 tgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtctccaagctaacaacaacaaaacagtcctagactagtgtatagcaaaaccacac 32246728  T
Q  100 aaagagctaac-aagcataaacaagataa--acggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggccta 196  Q
     ||||| |  | |||||||||||||||||  | |  |||| | ||||||         |||||| ||||||||||| ||  |||||||||||||||||||    
T  32246729 -aagagattccaaagcataaacaagataagcaagaaaaaaaggaagaac-----aaaacaccgaacaagattgttgaccttgttcagccaatatggccta 32246822  T
Q  197 atctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||||    
T  32246823 atctgggggagagagcagctctcc 32246846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 14291337 - 14291546
Alignment:
Q  4 tgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacacaa 101  Q
    ||||||||||||| ||||||| ||||||||| | | |||||| |||||||||||||||||||||  ||||||||  ||| |||| |||||||||||||||    
T  14291337 tgtgtggagcaagagatagtggtaatcaatgggca-aaatggtttccaagcaaacaacaacaaaaacagccctagactaatgtagagcaaaaccacacaa 14291435  T
Q  102 agagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaatct 200  Q
    |||| |||||| ||| ||||||||||| |   ||| |  ||||||         |||| || |||||||||| |||||||||||||||||||||||||||    
T  14291436 agagataacaaagca-aaacaagataagcaagaaagg--aagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaatct 14291526  T
Q  201 gggggagagagcagctctcc 220  Q
    ||||||||||||||||||||    
T  14291527 gggggagagagcagctctcc 14291546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 11099176 - 11098966
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||||||||  | |||||| |||||||||| ||||||||||  ||||||||  |||||||| |||||||||||||    
T  11099176 gatgtgtggagcaagagatagtggtaatcaatgaaca-aaatggtttccaagcaa-caacaacaaaaacagccctagactagtgtagagcaaaaccacac 11099079  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || ||| ||| |||||||||||  || | || | ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  11099078 aaagagataccaaagca-aaacaagataa--ggaagaaaggaagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaat 11098988  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  11098987 ctgggggagagagcagctctcc 11098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 9296651 - 9296440
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaacaaa--cagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||  | ||||| ||||| ||||| | |||||| |||||||||||||||||||||  ||||||||  |||||||| |||||||||||||    
T  9296651 gatgtgtggagcaaaaggtagtggtaatctatgagca-aaatggtttccaagcaaacaacaacaaaaacagccctagtctagtgtagagcaaaaccacac 9296553  T
Q  100 aaagagctaacaa-gcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| |||||| ||| |||||||| || |   ||| |  ||||||         |||| || |||||||||| |||||||||||||||||||||||||    
T  9296552 aaagagataacaaagca-aaacaagaaaagcaagaaagg--aagaacaaaa-----caccaag-aagattgttgacccagttcagccaatatggcctaat 9296462  T
Q  199 ctgggggagagagcagctctcc 220  Q
     |||||||||||||||||||||    
T  9296461 ttgggggagagagcagctctcc 9296440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 3491751 - 3491808
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3491751 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 3491808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 25398496 - 25398553
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  25398496 aagattgttgacccagttcagccaatatgacctaatctgggggagagagcagctctcc 25398553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 25403634 - 25403691
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  25403634 aagattgttgactcagttcagccaatatgacctaatctgggggagagagcagctctcc 25403691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 8040059 - 8040118
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8040059 caagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctcc 8040118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 40738844 - 40738900
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  40738844 aagattgttgacccagttcagccaatatgacctaatctggggg-gagagcagctctcc 40738900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 10445542 - 10445483
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||||  ||||||| | |||||||| ||||||||||||||||||||||||||||    
T  10445542 caagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctcc 10445483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 13569331 - 13569386
Alignment:
Q  166 attgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 13569386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 14699105 - 14699046
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  14699105 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctcc 14699046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 21629943 - 21630001
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||    
T  21629943 caagattgttgacccagttcagtccaatatgacctaatctgggg-agagagcagctctcc 21630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 34682432 - 34682373
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||||| |||||||| | |||||||| | ||||||||||||||||||||||||||    
T  34682432 caagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctcc 34682373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 28259274 - 28259216
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| |||||| |||||||||||||||||||||    
T  28259274 aagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctcc 28259216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 17865202 - 17865254
Alignment:
Q  162 caagattgttgtcccagttcagcc-aatatggcctaatctgggggagagagca 213  Q
    ||||||||||| |||||||||| | |||||| |||||||||||||||||||||    
T  17865202 caagattgttgacccagttcagtcgaatatgacctaatctgggggagagagca 17865254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 20522219 - 20522271
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagca 213  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||    
T  20522219 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagca 20522271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 34388859 - 34388916
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||| ||| | |||||||| ||||||||||||||||||| ||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctcc 34388916  T

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Target: scaffold0135 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 35302 - 35089
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaagctagtgtatagcaaaaccacac 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  35302 tgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagactagtgtatagcaaaaccacac 35203  T
Q  100 aaagagctaac-aagcataaacaagataaacggtaaaaggaaagaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaat 198  Q
    |||||| || | ||||| ||||||||||| |||||||||| ||||||         ||||||| |||||||||  |||||||||||||||||||||||||    
T  35202 aaagagataccaaagca-aaacaagataagcggtaaaagg-aagaac-----aaaacaccgag-aagattgttaacccagttcagccaatatggcctaat 35111  T
Q  199 ctgggggagagagcagctctcc 220  Q
    ||||||||||||||||||||||    
T  35110 ctgggggagagagcagctctcc 35089  T

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Target: scaffold0197 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19405 - 19192
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  19405 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 19307  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| |||||| ||| ||||         |||||||||||||||||| ||||||||||||| | ||||||||    
T  19306 ctaagagctaacaagcat--acaagataaacgataaaagaaaacgaac------aaacaccgagcaagattgttgacccagttcagccattgtggcctaa 19215  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  19214 tctgggggagagagcagctctcc 19192  T

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Target: scaffold0197; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 14549 - 14336
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  14549 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 14452  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  14451 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 14359  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  14358 tctgggggagagagcagctctcc 14336  T

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Target: scaffold0028 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 149196 - 148983
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||| ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  149196 tgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 149098  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| |||| | ||| ||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  149097 ctaagagctaacaagcat--acaagataaacgataaaggaaaacgaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 149006  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||| ||||||||    
T  149005 tctgggggagagagtagctctcc 148983  T

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Target: scaffold0259 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 2491 - 2278
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaac-aaacagccctaag-ctagtgtatagcaaaaccaca 98  Q
    |||||||||||||||||||||  ||||||| |||||  |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||||||||||    
T  2491 tgatgtgtggagcaagtgataaagataatccatgagtgcaaatggcctccaagctaacaacaacaaaacag-cctaagcctaatgtatagcaaaaccaca 2393  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | ||||||||||||||||  |||||||||||| |||| | ||| ||||         |||||||||||||||||| ||||||||||||||| ||||||||    
T  2392 ctaagagctaacaagcat--acaagataaacgataaaggaaaacgaac------aaacaccgagcaagattgttgacccagttcagccaatgtggcctaa 2301  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||| ||||||||    
T  2300 tctgggggagagagtagctctcc 2278  T

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Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 182204 - 181991
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaa-caacaacaaa-cagccctaagc-tagtgtatagcaaaaccaca 98  Q
    ||||||||||||||| ||||| | ||||| |||||  |||||||| ||||||| || |||||||||| ||||| ||||| || |||| |||||| |||||    
T  182204 gatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagctaatcaacaacaaaacagcc-taagcctaatgta-agcaaatccaca 182107  T
Q  99 caaagagctaacaagcataaacaagataaacggtaaaaggaaa-gaacnnnnnnnnncaccgagcaagattgttgtcccagttcagccaatatggcctaa 197  Q
    | |||||||||||||||||  ||||||||||| |||||| ||| ||||         |||| ||||||||||||| ||||||||||||||| ||||||||    
T  182106 ctaagagctaacaagcata--caagataaacgataaaagaaaacgaacaaaa-----caccaagcaagattgttgacccagttcagccaatgtggcctaa 182014  T
Q  198 tctgggggagagagcagctctcc 220  Q
    |||||||||||||||||||||||    
T  182013 tctgggggagagagcagctctcc 181991  T

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Target: scaffold0188 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 18048 - 17991
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18048 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 17991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 24141 - 24084
Alignment:
Q  163 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24141 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctcc 24084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 487 - 382
Alignment:
Q  2 gatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagca--aacaacaacaaacagccctaagctagtgtatagcaaaaccacac 99  Q
    ||||||||||||||| ||||||| ||||| ||||| | |||||| |||||||||  |||||||| |||||||||||| ||||||   |||||||||||||    
T  487 gatgtgtggagcaagagatagtggtaatctatgagcaaaaatggtttccaagcaacaacaacaaaaaacagccctaaactagtgaggagcaaaaccacac 388  T
Q  100 aaagag 105  Q
    ||||||    
T  387 aaagag 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34189 - 34132
Alignment:
Q  1 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaac 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  34189 tgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaac 34132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 8516 - 8458
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||    
T  8516 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcc 8458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 85684 - 85741
Alignment:
Q  164 agattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||| |||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctcc 85741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 13198 - 13233
Alignment:
Q  6 tgtggagcaagtgatagtgataatcaatgagaacaa 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  13198 tgtggagcaagtgatagtgataatcaatgagaacaa 13233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 5682 - 5736
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagc 215  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||||||||||||    
T  5682 caagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagc 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 10728 - 10787
Alignment:
Q  162 caagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||| ||| |||||||| | |||||||| |||||| |||||||||||||||||||||    
T  10728 caagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctcc 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 45276 - 45311
Alignment:
Q  185 caatatggcctaatctgggggagagagcagctctcc 220  Q
    ||||||| ||||||||||||||||||||||||||||    
T  45276 caatatgacctaatctgggggagagagcagctctcc 45311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 44058 - 44000
Alignment:
Q  163 aagattgttgtcccagttcag-ccaatatggcctaatctgggggagagagcagctctcc 220  Q
    |||||||||| |||||||| | ||||||||  ||| |||||||||||||||||||||||    
T  44058 aagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctcc 44000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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