View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1494_high_8 (Length: 338)
Name: NF1494_high_8
Description: NF1494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1494_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 70 - 329
Target Start/End: Original strand, 39033394 - 39033653
Alignment:
| Q |
70 |
ccacatccaaagattcttcttatagcttgaaaacttaggaaattgatttctgcaagcattagcatcgtcaatcacgtatagagatcacgaatatgattga |
169 |
Q |
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| T |
39033394 |
ccacatccaaagattcttcttatagcttgaaaacttaggaaattgatttctgcaagcattagcatcgtcaatcacgtatagagatcacgaatatgattga |
39033493 |
T |
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| Q |
170 |
ttgtcattaagaaattataaagtgagcatcgtattttaaaggaaactagattatcatacaaaatattacagtaactttaggttttgattaaactcaactt |
269 |
Q |
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| T |
39033494 |
ttgtcattaagaaattataaagtgagcatcgtattttaaaggaaactaaattatcatacaaaatattacagtaactttaggttttgattaaactcaactt |
39033593 |
T |
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| Q |
270 |
atctatcttaattaatttgattattttttagaaaatctttataaactaagttagtattat |
329 |
Q |
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| T |
39033594 |
atctatcttaattaatttgattattttttagaaaatctttataaactaagttaatattat |
39033653 |
T |
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