View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14950_high_2 (Length: 494)
Name: NF14950_high_2
Description: NF14950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14950_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 478; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 11194265 - 11193784
Alignment:
| Q |
1 |
gagttcaatctttctttggcaatgattttagcagctagttcagctgaaaaattcatgtggggtgaacaaaaaggtgagataagagaatgaagaaacttag |
100 |
Q |
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| T |
11194265 |
gagttcaatctttctttggcaatgattttagcagctagttcagctgaaaaattcatgtggggtgaacaaaaaggtgagataagagaatgaagaaacttag |
11194166 |
T |
|
| Q |
101 |
cattatcaactatggaatcttgatcattaggattaccatgaagtgaaagtaaagtttgaagttttgaaggggtgtgaatagcaagattgtaagcagcaac |
200 |
Q |
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| T |
11194165 |
cattatcaactatggaatcttgatcattaggattaccatgaagtgaaagtaaagtttgaagttttgaaggggtgtgaatagcaagattgtaagcagcaac |
11194066 |
T |
|
| Q |
201 |
aatcaaacgagcttgaacttgaagttcacaaggtttttctgataatggtgaagtagggttttgaagatgagagagtgtttgacatgtccaagatgaatga |
300 |
Q |
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| T |
11194065 |
aatcaaacgagcttgaacttgaagttcacaaggtttttctgataatggtgaagtagggttttgaagatgagagagtgtttgacatgtccaagatgaatga |
11193966 |
T |
|
| Q |
301 |
gaggaattgagggcaatggagaggcatttttggctgcagaaaaggtagtttgagcaagaaggacattgaaatgtttgtgaaggtggtaaggttctgaagc |
400 |
Q |
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| T |
11193965 |
gaggaattgagggcaatggagaggcatttttggctgcagaaaaggtagtttgagcaagaaggacattgaaatgtttgtgaaggtggtaaggttctgaagc |
11193866 |
T |
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| Q |
401 |
agttgtgacaataaggggagggtgtatgagagaaaagaggtgtagcagaatagagaagaagaggggattcagtgagaattat |
482 |
Q |
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| T |
11193865 |
agttgtgacaataaggggagggtgtatgagagaaaagaggtgtagcagaatagagaagaagaggggattcagtgaggattat |
11193784 |
T |
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