View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14951_high_4 (Length: 279)
Name: NF14951_high_4
Description: NF14951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14951_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 6 - 275
Target Start/End: Complemental strand, 5663390 - 5663121
Alignment:
| Q |
6 |
atgaagttcgtatacctataannnnnnngtcagaatacttagataatacaattaaattgtagtctgcaaatgcaattgcggctgcaatataaaattccta |
105 |
Q |
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| T |
5663390 |
atgaagttcgtatacctataatttttttgtcagaatacttagataatacaattaaattgtagtctgcaaatgcaattgcggctgcaatataaaattccta |
5663291 |
T |
|
| Q |
106 |
gagatatctgcagtggtaatttcaaccgcatcttcttcatgtttttgcatggccatcctcgtgtactctttttcacatagcctaataggcttctccatgg |
205 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5663290 |
gaggtatctgcagtggtaatttcaaccgcatcttcttcatgtttttgcatggccatcctcgtgtactctttttcacatagcctaataggcttctccatgg |
5663191 |
T |
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| Q |
206 |
agatctgttttaccttctatgataaagttaaactcctttgttggaaatttgtattcaatctatccctatg |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
5663190 |
agatctgttttaccttctatgataaagttaaactcctttgttggaaatttgtattcaatctatctctatg |
5663121 |
T |
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