View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14954_low_3 (Length: 222)
Name: NF14954_low_3
Description: NF14954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14954_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 44696472 - 44696278
Alignment:
| Q |
11 |
catcatcataatggcatgttatcatcaccaccatcatcatcctcatgtcaaattatgaatcctcgtggtgaagacttggctacaccgattcctagtgatt |
110 |
Q |
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| T |
44696472 |
catcatcataatggcatgttatcatcaccaccatcatcatcctcatgtcaaattatgaatcctcgtggtgaagacttggctacaccgattcctagtgatt |
44696373 |
T |
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| Q |
111 |
ctcatcattacttcgccggatcaaataatgttaatcatcatcacaaccaatctggtttgtggtttacgctacgctcctttaccaaccggtgagct |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44696372 |
ctcatcattacttcgccggatcaaataatgttaatcatcatcgcaaccaatctggtttgtggtttacgctacgctcctttaccaaccggtgagct |
44696278 |
T |
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