View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14955_low_1 (Length: 490)

Name: NF14955_low_1
Description: NF14955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14955_low_1
NF14955_low_1
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-338)||(115670-116007)
scaffold0029 (1-242)||(93849-94090)
[»] chr7 (24 HSPs)
chr7 (1-377)||(12712467-12712843)
chr7 (1-370)||(11385240-11385609)
chr7 (1-370)||(14283185-14283554)
chr7 (1-311)||(13676520-13676830)
chr7 (1-416)||(15099368-15099783)
chr7 (1-280)||(18050854-18051133)
chr7 (150-380)||(14144879-14145109)
chr7 (1-370)||(19150080-19150449)
chr7 (1-370)||(20749479-20749848)
chr7 (1-469)||(16947184-16947652)
chr7 (1-380)||(12798305-12798681)
chr7 (1-309)||(13965540-13965848)
chr7 (1-345)||(13024413-13024757)
chr7 (1-175)||(14140748-14140922)
chr7 (1-257)||(21755481-21755737)
chr7 (1-309)||(26091670-26091978)
chr7 (1-370)||(12459697-12460066)
chr7 (1-309)||(40924689-40924997)
chr7 (250-377)||(13004783-13004910)
chr7 (1-296)||(49155370-49155665)
chr7 (1-309)||(26115462-26115770)
chr7 (1-370)||(14261057-14261426)
chr7 (1-345)||(12203636-12203980)
chr7 (1-76)||(15343500-15343575)
[»] chr6 (20 HSPs)
chr6 (1-377)||(34642547-34642924)
chr6 (1-485)||(18797633-18798117)
chr6 (1-370)||(21566960-21567329)
chr6 (1-469)||(14376786-14377254)
chr6 (1-469)||(19437945-19438413)
chr6 (1-413)||(24515340-24515752)
chr6 (1-344)||(19455966-19456309)
chr6 (1-344)||(19466111-19466454)
chr6 (1-257)||(15462279-15462535)
chr6 (1-309)||(24367343-24367651)
chr6 (1-370)||(10465817-10466186)
chr6 (1-366)||(21474543-21474908)
chr6 (250-362)||(19881588-19881700)
chr6 (223-311)||(16813805-16813893)
chr6 (198-345)||(19486288-19486435)
chr6 (1-169)||(25770787-25770955)
chr6 (148-242)||(20010599-20010693)
chr6 (223-311)||(8720733-8720821)
chr6 (115-254)||(27559054-27559193)
chr6 (1-67)||(19486566-19486632)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-469)||(8190-8658)
scaffold0235 (1-469)||(18404-18872)
[»] chr3 (36 HSPs)
chr3 (1-380)||(16831570-16831949)
chr3 (1-485)||(17189082-17189566)
chr3 (1-485)||(24190012-24190495)
chr3 (73-380)||(16384414-16384721)
chr3 (1-469)||(31941611-31942079)
chr3 (1-469)||(31692138-31692606)
chr3 (1-469)||(12357480-12357948)
chr3 (1-370)||(18131399-18131768)
chr3 (1-280)||(8744532-8744811)
chr3 (1-280)||(13944732-13945011)
chr3 (1-377)||(16326752-16327130)
chr3 (1-469)||(16825232-16825700)
chr3 (1-380)||(12181052-12181431)
chr3 (1-313)||(17494355-17494666)
chr3 (1-380)||(14290574-14290953)
chr3 (1-240)||(11949107-11949346)
chr3 (1-380)||(11958223-11958602)
chr3 (1-380)||(35982889-35983268)
chr3 (1-309)||(47126652-47126960)
chr3 (1-309)||(28757027-28757335)
chr3 (1-309)||(10408676-10408984)
chr3 (124-362)||(13317629-13317867)
chr3 (1-242)||(10417225-10417466)
chr3 (1-382)||(12857536-12857916)
chr3 (148-311)||(15008695-15008855)
chr3 (1-93)||(13317863-13317955)
chr3 (101-254)||(11861151-11861304)
chr3 (101-254)||(12501731-12501884)
chr3 (221-344)||(15230531-15230654)
chr3 (221-344)||(15236399-15236522)
chr3 (223-309)||(2037025-2037111)
chr3 (223-309)||(2040766-2040852)
chr3 (223-309)||(14039676-14039762)
chr3 (1-38)||(12509867-12509904)
chr3 (1-38)||(15230311-15230348)
chr3 (1-38)||(15236179-15236216)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-479)||(8722-9200)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-370)||(40166-40535)
[»] chr8 (13 HSPs)
chr8 (1-370)||(22027547-22027916)
chr8 (1-380)||(22054008-22054387)
chr8 (1-257)||(16268604-16268860)
chr8 (1-370)||(31413799-31414168)
chr8 (1-275)||(29300788-29301062)
chr8 (1-257)||(28984056-28984312)
chr8 (1-380)||(22374014-22374393)
chr8 (1-485)||(21928573-21929057)
chr8 (61-311)||(6606795-6607045)
chr8 (224-361)||(20391454-20391591)
chr8 (1-77)||(20391231-20391307)
chr8 (1-119)||(28989275-28989393)
chr8 (222-280)||(30310501-30310559)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-380)||(263334-263713)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-380)||(203489-203868)
scaffold0003 (97-172)||(424512-424587)
[»] chr2 (11 HSPs)
chr2 (1-382)||(23274303-23274684)
chr2 (1-345)||(23097407-23097751)
chr2 (1-380)||(19716371-19716750)
chr2 (1-380)||(19720934-19721313)
chr2 (1-280)||(12577063-12577342)
chr2 (1-257)||(20848299-20848555)
chr2 (223-361)||(28350807-28350945)
chr2 (148-254)||(24657138-24657244)
chr2 (223-345)||(21901469-21901591)
chr2 (222-254)||(23205245-23205277)
chr2 (222-254)||(23676849-23676881)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-365)||(1680-2044)
[»] scaffold0765 (1 HSPs)
scaffold0765 (5-380)||(6074-6449)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-380)||(9604-9982)
[»] chr4 (17 HSPs)
chr4 (1-469)||(16150715-16151183)
chr4 (1-469)||(16154861-16155329)
chr4 (1-280)||(53750384-53750663)
chr4 (1-469)||(14993092-14993560)
chr4 (1-280)||(51603706-51603985)
chr4 (1-461)||(15266855-15267315)
chr4 (1-377)||(20893110-20893486)
chr4 (110-485)||(18259629-18260004)
chr4 (1-309)||(7357346-7357654)
chr4 (1-257)||(27903464-27903720)
chr4 (1-311)||(11204115-11204425)
chr4 (1-309)||(3261679-3261987)
chr4 (1-296)||(44658764-44659059)
chr4 (1-289)||(29450442-29450730)
chr4 (1-382)||(15073438-15073819)
chr4 (223-344)||(8708978-8709099)
chr4 (222-265)||(18604488-18604531)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-380)||(4666-5045)
scaffold0348 (1-380)||(17301-17680)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-370)||(372-741)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-427)||(37047-37473)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-380)||(304-683)
scaffold0222 (1-378)||(20922-21299)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-380)||(64419-64798)
scaffold0067 (1-380)||(48997-49376)
scaffold0067 (1-380)||(58031-58410)
scaffold0067 (1-461)||(29732-30192)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-380)||(98400-98779)
scaffold0020 (101-382)||(176195-176476)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-469)||(54155-54623)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-311)||(164287-164597)
[»] scaffold0664 (2 HSPs)
scaffold0664 (1-469)||(7146-7614)
scaffold0664 (437-469)||(1-33)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-345)||(22230-22574)
[»] chr1 (20 HSPs)
chr1 (1-413)||(20832754-20833165)
chr1 (1-380)||(21961152-21961531)
chr1 (1-461)||(22015550-22016010)
chr1 (1-469)||(21742349-21742817)
chr1 (1-311)||(24096570-24096880)
chr1 (1-257)||(20074718-20074974)
chr1 (1-311)||(52988866-52989176)
chr1 (1-469)||(19857399-19857867)
chr1 (1-309)||(37680174-37680482)
chr1 (1-452)||(21738850-21739301)
chr1 (1-309)||(38909783-38910091)
chr1 (1-309)||(48425998-48426306)
chr1 (1-370)||(31536893-31537262)
chr1 (62-309)||(20297569-20297816)
chr1 (1-242)||(20853784-20854025)
chr1 (1-77)||(18710510-18710586)
chr1 (295-378)||(21045042-21045125)
chr1 (220-254)||(16379407-16379441)
chr1 (223-361)||(18273114-18273252)
chr1 (222-280)||(21228542-21228600)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-344)||(5062-5405)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-280)||(771-1050)
scaffold0203 (332-469)||(3779-3916)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-344)||(39186-39529)
scaffold0010 (85-242)||(180794-180951)
scaffold0010 (222-280)||(14753-14811)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-342)||(325815-326155)
scaffold0004 (184-458)||(319534-319808)
scaffold0004 (1-38)||(200627-200664)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-345)||(53275-53619)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-470)||(34445-34914)
[»] scaffold0074 (2 HSPs)
scaffold0074 (100-469)||(15279-15648)
scaffold0074 (3-50)||(15233-15280)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-381)||(631-1011)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-485)||(50213-50697)
[»] scaffold0317 (1 HSPs)
scaffold0317 (16-311)||(2754-3049)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-380)||(700-1079)
[»] chr5 (23 HSPs)
chr5 (1-365)||(17266345-17266709)
chr5 (1-382)||(23563162-23563543)
chr5 (1-309)||(25851065-25851373)
chr5 (1-370)||(23077911-23078280)
chr5 (1-370)||(22505672-22506041)
chr5 (1-309)||(20345275-20345583)
chr5 (1-309)||(14884058-14884366)
chr5 (222-467)||(21870187-21870432)
chr5 (222-467)||(21874467-21874712)
chr5 (1-242)||(20824446-20824687)
chr5 (1-242)||(28892076-28892317)
chr5 (1-242)||(20778906-20779147)
chr5 (1-242)||(22464943-22465184)
chr5 (148-345)||(23669772-23669969)
chr5 (225-361)||(21983192-21983328)
chr5 (61-311)||(43122520-43122770)
chr5 (225-361)||(21561040-21561176)
chr5 (223-309)||(16258103-16258189)
chr5 (223-309)||(22591822-22591908)
chr5 (223-309)||(22595377-22595463)
chr5 (1-77)||(21561324-21561400)
chr5 (222-280)||(18782346-18782404)
chr5 (1-38)||(21983515-21983552)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-380)||(5913-6291)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-344)||(1805-2148)
scaffold0034 (1-257)||(70480-70736)
scaffold0034 (151-380)||(11723-11952)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-461)||(1047-1507)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-485)||(7852-8336)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-344)||(8874-9217)
[»] scaffold0146 (1 HSPs)
scaffold0146 (43-380)||(101-438)
[»] scaffold2062 (1 HSPs)
scaffold2062 (1-388)||(681-1073)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-344)||(9625-9968)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-469)||(5289-5756)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-469)||(70216-70684)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-338)||(63378-63715)
[»] scaffold1426 (1 HSPs)
scaffold1426 (1-257)||(1547-1803)
[»] scaffold0053 (2 HSPs)
scaffold0053 (19-455)||(62514-62950)
scaffold0053 (1-257)||(65238-65494)
[»] scaffold0523 (2 HSPs)
scaffold0523 (15-455)||(5562-5999)
scaffold0523 (1-257)||(11683-11939)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-380)||(4121-4500)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-257)||(569-825)
[»] scaffold0017 (2 HSPs)
scaffold0017 (150-382)||(4268-4500)
scaffold0017 (115-254)||(17009-17148)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-311)||(11085-11395)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-311)||(514239-514549)
[»] scaffold0167 (1 HSPs)
scaffold0167 (42-311)||(5202-5471)
[»] scaffold1517 (1 HSPs)
scaffold1517 (1-380)||(1304-1683)
[»] scaffold0011 (2 HSPs)
scaffold0011 (127-380)||(153726-153979)
scaffold0011 (1-101)||(151675-151775)
[»] scaffold0708 (1 HSPs)
scaffold0708 (1-345)||(4997-5341)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-309)||(41843-42151)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-379)||(42806-43184)
scaffold0102 (222-279)||(50263-50320)
[»] scaffold0266 (1 HSPs)
scaffold0266 (17-378)||(16761-17122)
[»] scaffold2165 (1 HSPs)
scaffold2165 (1-311)||(689-999)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-311)||(30212-30522)
[»] scaffold0151 (1 HSPs)
scaffold0151 (184-382)||(357-555)
[»] scaffold1056 (1 HSPs)
scaffold1056 (1-364)||(1829-2190)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-145)||(19021-19165)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-247)||(12835-13081)
[»] scaffold0261 (2 HSPs)
scaffold0261 (103-382)||(12229-12506)
scaffold0261 (103-382)||(20409-20686)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-382)||(29635-30016)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-257)||(30042-30298)
[»] scaffold0434 (1 HSPs)
scaffold0434 (222-459)||(5640-5877)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-215)||(12068-12282)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-215)||(43401-43615)
[»] scaffold1914 (1 HSPs)
scaffold1914 (181-277)||(1150-1246)
[»] scaffold0865 (1 HSPs)
scaffold0865 (1-380)||(1089-1468)
[»] scaffold0133 (1 HSPs)
scaffold0133 (1-380)||(28102-28481)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-311)||(66994-67304)
[»] scaffold1530 (2 HSPs)
scaffold1530 (188-344)||(799-955)
scaffold1530 (1-107)||(691-797)
[»] scaffold0031 (1 HSPs)
scaffold0031 (222-382)||(115953-116113)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-380)||(51759-52138)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-311)||(251730-252037)
[»] scaffold0490 (1 HSPs)
scaffold0490 (243-467)||(3215-3439)
[»] scaffold0443 (2 HSPs)
scaffold0443 (154-266)||(12058-12170)
scaffold0443 (1-95)||(11917-12011)
[»] scaffold0405 (1 HSPs)
scaffold0405 (1-257)||(5710-5966)
[»] scaffold0276 (1 HSPs)
scaffold0276 (154-309)||(23811-23966)
[»] scaffold0079 (1 HSPs)
scaffold0079 (101-254)||(36706-36859)
[»] scaffold0130 (2 HSPs)
scaffold0130 (148-344)||(3745-3941)
scaffold0130 (1-77)||(4012-4088)
[»] scaffold1845 (1 HSPs)
scaffold1845 (196-311)||(1190-1305)
[»] scaffold0188 (1 HSPs)
scaffold0188 (235-370)||(33199-33334)
[»] scaffold0298 (1 HSPs)
scaffold0298 (1-71)||(9353-9423)
[»] scaffold0181 (1 HSPs)
scaffold0181 (148-254)||(28871-28977)
[»] scaffold0585 (2 HSPs)
scaffold0585 (283-388)||(669-774)
scaffold0585 (1-38)||(4248-4285)
[»] scaffold1220 (1 HSPs)
scaffold1220 (158-254)||(1-97)
[»] scaffold0028 (1 HSPs)
scaffold0028 (97-169)||(55208-55280)
[»] scaffold0819 (1 HSPs)
scaffold0819 (101-192)||(322-413)
[»] scaffold0007 (1 HSPs)
scaffold0007 (97-172)||(48869-48944)
[»] scaffold1288 (1 HSPs)
scaffold1288 (1-51)||(1-51)


Alignment Details
Target: scaffold0029 (Bit Score: 270; Significance: 1e-150; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 115670 - 116007
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  115670 ttaaagaaacaagtacctctgataagtctatcttcatttgtggtttgcataccagccaaggcaaacactttcccaccggtcctaaccttcttcggttgag 115769  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  115770 tgcactgagaactgatatgaccctccccattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaa 115869  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  115870 gcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggcctt 115969  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcagg 338  Q
    ||||||||||| ||||||||||| ||||| ||||||||    
T  115970 ctctcatcattcagtcgttgctttcccttaccagcagg 116007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 94090 - 93849
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || |||||||| | ||| ||||| ||||| || || || || |||||||| |||||||    
T  94090 ttaaagaaacaagtacctctgataagtcgatcctcattagtagtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgag 93991  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| || || ||||| |||   |||||| | || || ||||| |||||||||||||| || ||||| ||||| ||||||||  | |||||    
T  93990 tgcactgcgaactaatgtgaccctcatcaccacagttaaaacaaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaa 93891  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| |  || ||| ||||||| ||||||||    
T  93890 acatttcttctcatcttgagtgcaagcattactcttgtggcc 93849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 265; Significance: 1e-147; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 1 - 377
Target Start/End: Complemental strand, 12712843 - 12712467
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||||| | ||| |||||||||||| ||||||    
T  12712843 ttaaagaaacaagtacctctgataagtctatcttgatttgtggtttgcgtacccgccaaggcaaacactttcccgctggtcctaaccttcttccgttgag 12712744  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||| ||||||| |||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  12712743 tgcactgagaattgatatgaccctccccattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgacccttctgtccacacctgaa 12712644  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  12712643 gcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggagtgtctcttcccttgggtctt 12712544  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcc 377  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||  |||||| ||||||||||| |||| ||||||    
T  12712543 ctctcatcattcagtcgttgctttcccttaccagcaggagcactgtacggcttaggacgactctgttgtcccttgcc 12712467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 11385609 - 11385240
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||| |||||||| |  || |||||||| | ||| |||||||| |||||||| ||||||| |||||| |||||||    
T  11385609 ttaaagaaacaagtacctctgataagtctgtcctcattagtagtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggttgag 11385510  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||| |||||||| ||||  || ||||| || || | |||||| | |||||| | ||| ||   ||| || ||||||||| |||||||    
T  11385509 tgcactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaa 11385410  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||| |||||| |||    
T  11385409 gcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagcaggagcatctctcctcttgggcctt 11385310  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| ||||||||||| |||||| ||||||| ||||||  |||||| ||| ||||||| ||||    
T  11385309 ctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgactctgttgtc 11385240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 14283554 - 14283185
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| | ||| ||||||||||||||||||||||||||||||||||| || |    
T  14283554 ttaaagaaacaagtacctctgataagacagtcctcattagtagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtg 14283455  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
     |||||| |  |||||||| |||||||| ||||||||||| ||||| | ||||||||||||||||||||||||   |||||||||||||||| |||||||    
T  14283454 ggcactgtgtgctgatatgaccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaa 14283355  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||| |  ||||||||||  |||||||    ||| ||     
T  14283354 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcatctctcctaacgggcctc 14283255  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| ||||  ||||| |||||  ||||||| |||||   ||||||||| |||||||||||||    
T  14283254 ctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcgggcgactctgctgtc 14283185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 13676520 - 13676830
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||| |    
T  13676520 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtg 13676619  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||   ||| |||||||| ||| |||||||    
T  13676620 cacactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaa 13676719  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    | ||||||||||||| ||   |||||||||||| |||||||||||||  ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  13676720 gtacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 13676819  T
Q  301 ctctcatcatt 311  Q
    |||||||||||    
T  13676820 ctctcatcatt 13676830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 416
Target Start/End: Complemental strand, 15099783 - 15099368
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||| |||||||||||  ||||||||  | || ||| |||| |  || |||||||| || ||||| || |||||||||||||| || |    
T  15099783 ttaaagaaacaagtacatctgataagtcggtcctcattaactgtctgcataccagttaaagcaaacaccttaccacctgtcctaaccttcttcggctgcg 15099684  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || |||||||||||||| || || || || |||||||| |||||| |||    ||| |||||||||||| |||||||    
T  15099683 tacactgcgaactgatatgaccttcctcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaa 15099584  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||||| ||||| |||||||||||||| |||||||| ||||||||||| |||| |||||  ||||||| |||||| ||     
T  15099583 gcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcctc 15099484  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||| |||||||||  |  ||||| |||||| |||||||||||||   |||| |||||||||||||||||| |||||||||||  |||| || ||| |||     
T  15099483 ctcccatcatttaacctctgcttacccttgtcagcaggagcactatacggcgtcggacgactctgctgtcccttgcctctacgctcactcatcaccttgt 15099384  T
Q  401 aataagctatcgtgtc 416  Q
    ||| |||| |||||||    
T  15099383 aatgagctttcgtgtc 15099368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 18051133 - 18050854
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| || |  |||||||| || || || ||||| | ||| ||||| ||||| |||||   ||||||||||||||| || |    
T  18051133 ttaaagaaacaagtacctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtg 18051034  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| || ||||||||||| || ||||| ||||| | |||||| ||||||||||| |||| || |||||||||||| ||| | |||||    
T  18051033 tgcactgagtactgatgtgaccctcttcattacaattataacatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaa 18050934  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
     |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  18050933 acacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 18050854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 150 - 380
Target Start/End: Original strand, 14144879 - 14145109
Alignment:
Q  150 atcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcg 249  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  14144879 atcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttctcg 14144978  T
Q  250 ccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcg 349  Q
    ||| ||||||| |||||||| ||||||||||  |||||||  |  || || ||||||||||| ||||  ||||| |||||| ||||||| ||||||  ||    
T  14144979 ccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtacg 14145078  T
Q  350 gcttcggacgactctgctgtctcttgcctct 380  Q
    |||| |||||||||||||||| ||| |||||    
T  14145079 gcttaggacgactctgctgtcccttacctct 14145109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 19150080 - 19150449
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| ||||| ||||| |||||  | ||| ||||||| ||||| |    
T  19150080 ttaaagaaacaagtacctctgataagtcggtcctcattcacagtttgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcg 19150179  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || |||||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||||||| |||| ||    
T  19150180 tacactgcgaactaatatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaa 19150279  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    ||||||||||| || || | | ||| |||||||| |||||||||||||| |||||||| |||||||| || |||| |||||  ||||||| ||| || ||    
T  19150280 gcacttcttctgat-ctcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcct 19150378  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
     ||||||||||| |  |  ||||| |||||| ||||||| ||||| | |||||||||||||||||||||||    
T  19150379 cctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgactctgctgtc 19150449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 20749479 - 20749848
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| ||||| ||||| |||||  | ||| ||||||| ||||| |    
T  20749479 ttaaagaaacaagtacctctgataagtcggtcctcattcacagtttgcgtaccagtcaacgcaaatactttaccacctatcctagccttcttaggttgcg 20749578  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || |||||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||||||| |||| ||    
T  20749579 tacactgcgaactaatatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaa 20749678  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    ||||||||||| || || | | ||| |||||||| |||||||||||||| |||||||| |||||||| || |||| |||||  ||||||| ||| || ||    
T  20749679 gcacttcttctgat-ctcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcct 20749777  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
     ||||||||||| |  |  ||||| |||||| ||||||| ||||| | |||||||||||||||||||||||    
T  20749778 cctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgactctgctgtc 20749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 16947652 - 16947184
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || ||||||||   ||| |||||||||||||||||||||||| |||||||| | |||     
T  16947652 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcgtaccattcaatgcaaacactttcccaccggttctagccttcttcagctgaa 16947553  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| |||||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||| |||| |     
T  16947552 tacactgtgaactgatatgaccctcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaac 16947453  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||| |||||||  |   |||| ||||||| ||||||||||| || ||||||||  | ||||| |||||| | ||||  ||||||| |||||| |||    
T  16947452 acacttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggcctt 16947353  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| | ||  ||||| |||||| ||||||| ||||||   || || |||||||||||||||| ||| || || |  |||| || ||| |||     
T  16947352 ctctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttaccccttctctcactcatcaccttgt 16947253  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| |||| || |||| ||||| | ||||| |||| ||||||||||||||  |||| |||||||    
T  16947252 aatgagctttcgtatcctcttcatagattctgcagctactcaccaattcagagaaaattctaatcttct 16947184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 12798681 - 12798305
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| ||||| || || ||||| || ||| ||||||| || || |    
T  12798681 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccagtcaacgcaaaaaccttgccacctgtcctagccttcttaggctgtg 12798582  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || |||||||| ||||| ||||| || | ||| |||||||  |||||||||||   ||| || ||||||||| |||||||    
T  12798581 tacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaa 12798482  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || ||| |||||||||||| |||||||||||    |||||||| || ||||| || |||| | |||  ||||||| |||| | ||    
T  12798481 gcacttcttctcat-ctcggtcacaaacattactcttgtggccttt---tccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcct 12798386  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
     ||||||||||| | ||  ||||| |||||| |||||||||||||   ||||||||||||||||||||||| |||||||||    
T  12798385 cctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctct 12798305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 13965848 - 13965540
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| |||||||| |||||| |||||||||| | ||    
T  13965848 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttcccaccagttctagccttcttcggctcag 13965749  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| |||||| ||||||| || ||||| || ||||| ||||||||||| |||||||    |||||||||||||||| |||||||    
T  13965748 gacactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaa 13965649  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||| ||  | ||||| ||   |||||||||||| |||||| ||||||| ||||||||  ||||| | || ||||||||||  ||||||| |||||| ||     
T  13965648 gcattttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctc 13965549  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  13965548 ctatcatca 13965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 13024413 - 13024757
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||||  || |||||||| | ||| |||||||||||||||||||| ||| |||||||||| ||||    
T  13024413 ttaaagaaacaagtacctctgataagtcggtcctcatttgtagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgag 13024512  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||||||||||||||| || ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || |||| |||| |||||||    
T  13024513 tacactgagaactgatatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaa 13024612  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| ||||||   |   | || |||| |||||||||||||| || ||||||||  | ||||| |||||||||||||  ||||||| |||||| ||     
T  13024613 acatttcctctcatatctaccataagcattgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctc 13024712  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    || |||||||| |  |  ||||| || ||| ||||||||||||||    
T  13024713 ctatcatcattcatcctctgcttccctttgtcagcaggagcactg 13024757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 14140748 - 14140922
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||| |||||||| |  || |||||||| | ||| ||||| || |||||||| ||||||||||||||||| || |    
T  14140748 ttaaagaaacaagtacctctgataagtctttcctcattagtagtctgcgtaccagtcaaagcaaataccttcccaccagttctaaccttcttcggctgtg 14140847  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaaca 175  Q
    ||||||||| |||||| ||||||||||| || || ||||| ||||| | ||||||||||||||||||||||||||    
T  14140848 tgcactgagtactgatgtggccctcttcgttacaattataacatacaacatcaccacgcttgcaatcagctaaca 14140922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 21755481 - 21755737
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || || ||||||||||||||||| | ||    
T  21755481 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggctcag 21755580  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| || || ||||| |||||| |||||||||| ||||| || ||||| |||||||| || ||||||||   |||||||||||||||| |||||||    
T  21755581 gacactgtgagctaatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaa 21755680  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
     |||||| ||||||| ||   ||||||||| || ||||||||||| || ||||||||    
T  21755681 acacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacactt 21755737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 26091978 - 26091670
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  26091978 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcag 26091879  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  26091878 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 26091779  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  26091778 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 26091679  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  26091678 ctatcatca 26091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 12459697 - 12460066
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||||  || ||||||||   |||  ||||||||||||| ||||| || ||||||||||| ||||    
T  12459697 ttaaagaaacaagtacctctgataagtcggtcctcatttgtagtctgcgtacctttcaattcaaacactttccctccggtcctgaccttcttcggctgag 12459796  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || |||||||||||||||||||| || || || |||||||| || |||||||    ||| |||||||||||| |||| ||    
T  12459797 tacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaa 12459896  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| |||||||  |   |||| |||| || ||||||||||| || ||||||||  | || || || |||||||||   ||||||| |||||| ||     
T  12459897 acatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctc 12459996  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    || |||||||| | |   ||||| |||||| ||||| ||||| ||   ||||| ||||||||||||||||    
T  12459997 ctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtc 12460066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 40924997 - 40924689
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || ||  |||||  ||||||||| | ||    
T  40924997 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcag 40924898  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  40924897 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 40924798  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  40924797 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 40924698  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  40924697 ctatcatca 40924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 250 - 377
Target Start/End: Original strand, 13004783 - 13004910
Alignment:
Q  250 ccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcg 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||  ||    
T  13004783 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacg 13004882  T
Q  350 gcttcggacgactctgctgtctcttgcc 377  Q
    |||| ||||||||||| |||| ||||||    
T  13004883 gcttaggacgactctgttgtcccttgcc 13004910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 49155370 - 49155665
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  49155370 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcag 49155469  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||    ||||||||||||||| |||||||    
T  49155470 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaa 49155569  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttggg 296  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| ||||||    
T  49155570 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttggg 49155665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 26115770 - 26115462
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| ||||  |||||||| |  || |||||||| | ||| |||||||| || ||||| ||||||  ||||||||||| ||    
T  26115770 ttaaagaaacaagtacctctgatgagtcggtcctcattaggagtgtgcgtaccagtcaaagcaaacacctttccaccagttctagtcttcttcggttcag 26115671  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| | ||| ||||| || ||| ||||||| || || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  26115670 gacactgtgtactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 26115571  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  | ||||| || ||||| ||||  ||||||| |||||| ||     
T  26115570 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctc 26115471  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  26115470 ctatcatca 26115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 14261426 - 14261057
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||| ||||||||||||||||||  ||||||||    ||||||||||| | ||| ||||| || || ||||| || ||||||||||| || ||      
T  14261426 ttaaagaaataagtacctctgataagtcggtcctcattcatagtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgca 14261327  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |  |||| ||||| ||||| || || ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||||| | |||| ||    
T  14261326 taaactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaa 14261227  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    | |||||||||||| || | | ||  |||||||| |||||||||||||| |||||||| |||||||  || |||| |||||  | ||||||||| || ||    
T  14261226 gtacttcttctcat-ctcgatgacgcacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcct 14261128  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
     ||||||||||| ||||  | ||| |||||| ||||||| |||||   ||||||||||||||||| |||||    
T  14261127 cctctcatcattcagtctctacttacccttgtcagcaggggcactatacggcttcggacgactctactgtc 14261057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 12203980 - 12203636
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| |||||||||  | || |  ||||||| ||| |||||||| || ||||| ||   | ||||||| || |       
T  12203980 ttaaagaaacaagtacctctgataagtcgatcctcattaaccgtctatgtaccggtcaatgcaaacacctttccacctgtctgagccttcttaggcttcc 12203881  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| || || || | ||| || |||||||  || ||  |||| || |||||| |||||||||| ||||||| |   || || ||||  ||| | | |||    
T  12203880 tgcattgcgagctaagatgaccttcttcatcacaattgaagcaaacaatatcatcacgcttgcattcagctatcgtatgccctttcttcccacatcagaa 12203781  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||| ||||||||     ||||||||||||| |||||||| ||||| ||||||||  ||||||| ||  ||||||||   ||||||| ||| |||||     
T  12203780 gcactttttctcatcaccattacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctc 12203681  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    ||||||||||| | || ||| || || ||| ||||||||||||||    
T  12203680 ctctcatcattcaatctttgtttccctttgtcagcaggagcactg 12203636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15343500 - 15343575
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccac 76  Q
    |||||||||||||||||||||||||| || |||||||| |  || |||||||| | ||| ||||||||||| ||||    
T  15343500 ttaaagaaacaagtacctctgataagcctgtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccac 15343575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 377
Target Start/End: Complemental strand, 34642924 - 34642547
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  34642924 ttaaagaaacaagtacctctgataagtctatcttcattcgcggtttgcgtaccagccaaggcaaacactttcccaccggtcctaaccttcttcggttgag 34642825  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||||||||||| |||||  |||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||| ||| |||||||    
T  34642824 tgcactgagaactgatatgaccctccccattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgacccttctgtccacacctgaa 34642725  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctcccctt-gggtct 299  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||    
T  34642724 gcacttcttctcatctttggtacaaacattacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggagtgtctcttcccttggggtct 34642625  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcc 377  Q
     || |||||||| ||||||||||| ||||| ||||||||||||||   |||||| ||||||||||| |||| ||||||    
T  34642624 cctttcatcattcagtcgttgctttcccttaccagcaggagcactatacggcttaggacgactctgttgtcccttgcc 34642547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 18797633 - 18798117
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | |  || |||||||| | ||| |||||||||||||||||||||||||||||||| |||||||    
T  18797633 ttaaagaaacaagtacctctgataagtcgatcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttctttggttgag 18797732  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||| || ||||||||||||||||| || |  ||||||||||||||||||||||    ||| |||||||||||| |||||||    
T  18797733 tgcactgtgaactgatatggccttcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaa 18797832  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || |||| |||||| || || ||||||||||| |||||||||||||||||||||||| | ||||| || ||  ||||||  || |||| |||||| ||     
T  18797833 acatttctgctcatctttagtgcaaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctc 18797932  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| | || |||||| |||||| |||||||||||||   ||||||||||||||||||||||| ||||||||| | ||||| || ||| |||     
T  18797933 ctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcggtcactcatcaccttgt 18798032  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
    ||| ||||   ||||| |||| ||||| | ||||| |||||||||| |||||||||||||||||||||| | | |||||||||||    
T  18798033 aatgagcttctgtgtcctcttcatagattctgcagctacttaccaactcagagaagtttctgatcttctggtatccaatagccct 18798117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 21567329 - 21566960
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||  | |||| ||| |  || |||||||| | ||| ||||||||||| ||||||||||||| |||||| || ||||    
T  21567329 ttaaagaaacaagtacctctgataagcatgtccttattagtagtctgcgtaccagtcaaagcaaacacttttccaccggttctaatcttctttggctgag 21567230  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||| |||||||| | ||  || ||||| || || | |||||| | |||||| | ||| ||   ||| || ||||||||| |||||||    
T  21567229 tgcactgggaactgatgtggccctccttatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaa 21567130  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||    
T  21567129 gcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagcatctctcctcttgggcctt 21567030  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| ||||||||||| |||||| ||||||| ||||||  |||||| ||||||||||| ||||    
T  21567029 ctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttgtc 21566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 14377254 - 14376786
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||| | |  || |||||||| | ||| ||||||||||| ||||||||||||||||||||||| || |    
T  14377254 ttaaagaaacaagtacctctgataagtcggtcctcactagtagtctgcgtaccagtcaatgcaaacacttttccaccggttctaaccttcttcggctgtg 14377155  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | || || |||||||| ||||||||||||||||||||||| || || | |||||||||||| |||| ||||||   ||| || ||||||||| |||||||    
T  14377154 tacattgcgaactgatgtggccctcttcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaa 14377055  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||| || |||||  ||||||| |  ||| ||||||  |||||||  ||||||||     
T  14377054 gcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctc 14376955  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |  |  || || |||||| |||||||||||||   ||||||||||||||||||||||| |||||  || |  |||| || ||| |||     
T  14376954 ctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgctccttcgatcactcatcaccttgt 14376855  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| ||||||| || | |||||   ||||| |||| ||||||||||||||||||||||||||||    
T  14376854 aatgagctttcgtgtcctcctcatagatcctgcagctactaaccaattcagagaagtttctgatcttct 14376786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 19437945 - 19438413
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||| | | | |||||||||||| | ||  |||||||| || ||||  || |||||||||||||| || |    
T  19437945 ttaaagaaacaagtacctctgataagtcgatccttactagtggtttgcgtaccagtcagagcaaacaccttaccactagtcctaaccttcttcggctgtg 19438044  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||||||||||| |||||| ||||||||||| ||||| | |||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  19438045 tgcactgcgaactgatatggcgctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 19438144  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||| |||||||| || ||||||||||||||   |||||||||||| ||||||||  | | ||| || ||||||||||  ||||||| |||||| ||     
T  19438145 acacttattctcatctttagtacaaacattactcaagtggcctttctcaccacacttgtaacgaacgatctcagcaggagcatctctcctcttgggcctc 19438244  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    |||||||||||||  |  ||||| |||||| |||||||||||||    |||||||||||||||||||||| ||| ||||| |  |||| ||  || |||     
T  19438245 ctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctctcctttcactcactaccttgt 19438344  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    |||||||  |||| || |||| |||||   | ||| | |||||||| ||||| ||||||||||||||||    
T  19438345 aataagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagtttctgatcttct 19438413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 24515752 - 24515340
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  | |||||| || |||||||| |||||| || ||||||| |    
T  24515752 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagaaaacacgttaccaccggtcctaaccgtcctcggttgcg 24515653  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| |||||||| || || || |||||||||||||| || || | ||| || | ||| ||||||||||    ||| |  ||||||||| |||||||    
T  24515652 tacactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtcttttctgaccacacctgaa 24515553  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| || |||||||||||||| |||||||||||||| ||||||||| | ||||| || ||| ||||||  ||||||| |||||| ||     
T  24515552 acacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcctc 24515453  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  || || |||||| |||||||||||||    || || ||||||||||| |||| ||||||||| | ||||| || ||| |||     
T  24515452 ctctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttgcctctgcggtcactcatcaccttgt 24515353  T
Q  401 aataagctatcgt 413  Q
    ||| |||| ||||    
T  24515352 aatgagctttcgt 24515340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 19455966 - 19456309
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||   ||||||| | | |||||||||||| | ||  ||||||||||| |||||||| ||||||||||| |||||||    
T  19455966 ttaaagaaacaagtacctctgataagaaaatcctcaatagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctttggttgag 19456065  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||| ||||| || || || |||||||||||||| || || || |||||||| |||||| |||    ||| || |||||||   |||||||    
T  19456066 tacactacgaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaa 19456165  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||| |||||||| ||||||||||| || |||||||| |||||||| || |||| |||||| ||||||| |||||| ||     
T  19456166 gcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctc 19456265  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||| || | ||| || || ||| |||||||||||||    
T  19456266 ctctcatcattcagcctttgttttcctttgtcagcaggagcact 19456309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 19466111 - 19466454
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||   ||||||| | | |||||||||||| | ||  ||||||||||| |||||||| ||||||||||| |||||||    
T  19466111 ttaaagaaacaagtacctctgataagaaaatcctcaatagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttctttggttgag 19466210  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||| ||||| || || || |||||||||||||| || || || |||||||| |||||| |||    ||| || |||||||   |||||||    
T  19466211 tacactacgaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaa 19466310  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||| |||||||| ||||||||||| || |||||||| |||||||| || |||| |||||| ||||||| |||||| ||     
T  19466311 gcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctc 19466410  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||| || | ||| || || ||| |||||||||||||    
T  19466411 ctctcatcattcagcctttgttttcctttgtcagcaggagcact 19466454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 15462279 - 15462535
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || |||||||| | ||||||||| ||||| || || ||||| |||||||| ||||| |    
T  15462279 ttaaagaaacaagtacctctgataagtcgatcctcattggtagtctgcgtaccagtcaaggcaaatacttttcctccagttctgaccttcttaggttgcg 15462378  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| || |||||||| |||   |||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||||||||  | |||||    
T  15462379 tgcactgcgaactaatgtggccctcctcaccacagttataacacacgatatctccccgcttgcactcagccaacacatgacctttctgaccgcatctgaa 15462478  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
     || |||||||||||  |||| || |||||||| |||||||||||| | ||||||||    
T  15462479 acatttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacactt 15462535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 24367343 - 24367651
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| |||||||| ||||||   |||||||||| ||    
T  24367343 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacaccttcccaccagttctagttttcttcggttcag 24367442  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
     |||||| ||||| ||||| || ||| ||||||| || || || || || || || |||||||| ||||||||   |||||||||||||||| |||||||    
T  24367443 ggcactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaa 24367542  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| || |||  ||||||| |||||| ||     
T  24367543 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctc 24367642  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  24367643 ctatcatca 24367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 10466186 - 10465817
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||||  |||  ||||||||||||| ||||| || ||||||||||| ||||    
T  10466186 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccgatcaatacaaacactttccctccggtcctgaccttcttcggctgag 10466087  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || |||||||||||||||||||| || || || |||||||| || |||||||    ||| |||||||||||| |||| ||    
T  10466086 tacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaa 10465987  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| |||||||  |   |||| |||| || ||||||||||| || ||||||||  | || || || |||||||||   ||||||| |||||| ||     
T  10465986 acatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctc 10465887  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    || |||||||| | |   ||||| |||||| ||||| ||||| ||   ||||| ||||||||||||||||    
T  10465886 ctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtc 10465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 366
Target Start/End: Original strand, 21474543 - 21474908
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||| |||||||||||||||  |||||||| |  ||||||||||| | ||| |||||||| || ||||| ||   | ||||||| ||||       
T  21474543 ttaaagaaacaaatacctctgataagtcggtcctcattagaagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggtttcc 21474642  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||||| ||||| ||||||||||  || || ||||| || ||||||||||||||||| ||||| ||   ||| || ||||  ||| | | |||    
T  21474643 tgcactgagaactaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaa 21474742  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||   |  ||| |||||||| ||||||||||| || |||||||| || ||||| || |||| |||||  ||||||| | | || ||     
T  21474743 acacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctc 21474842  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgc 366  Q
    ||||||||||| ||    ||||| |||||| |||||||||||||   |||||||||||||||||||    
T  21474843 ctctcatcattcagcatctgcttacccttgtcagcaggagcactatacggcttcggacgactctgc 21474908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 250 - 362
Target Start/End: Original strand, 19881588 - 19881700
Alignment:
Q  250 ccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcg 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||| || |||  ||    
T  19881588 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacg 19881687  T
Q  350 gcttcggacgact 362  Q
    |||| ||||||||    
T  19881688 gcttaggacgact 19881700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 16813805 - 16813893
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
    ||||||||||| |||||||||||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcatt 16813893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 345
Target Start/End: Complemental strand, 19486435 - 19486288
Alignment:
Q  198 gaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggt 297  Q
    ||||||||||||||||||     | ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||| ||||   ||||| | ||| |||    
T  19486435 gaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggt 19486336  T
Q  298 cttctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    || ||||||||||| | || |||||| || ||| ||||||||||||||    
T  19486335 ctcctctcatcattcaatctttgcttccctttgtcagcaggagcactg 19486288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 25770787 - 25770955
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||| |||  | |||||| |||  | ||| | |||||| || ||||| ||   | ||||||| ||||       
T  25770787 ttaaagaaacaagtacctctgataagtcggtccttattaacagtttgcttactagtcaaaggaaacaccttgccacctgtcagagccttcttaggtttcc 25770886  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcag 169  Q
    |||||||||| || ||||| || |||||||  || || ||||| || ||||||||||||||||||||||    
T  25770887 tgcactgagagctaatatgaccttcttcatcacaattgtagcacacaatatcaccacgcttgcaatcag 25770955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 20010693 - 20010599
Alignment:
Q  148 atatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
    ||||| ||||||||||| ||||| ||||  ||||||||||||||  | ||||| || ||||||||||| | ||| ||| ||||||| ||||||||    
T  20010693 atatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 8720821 - 8720733
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
    ||||||||||| |||||||||||||| ||||||||  ||||||| || ||| |||||   ||||||| ||| || || |||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcatt 8720733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 254
Target Start/End: Complemental strand, 27559193 - 27559054
Alignment:
Q  115 atatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcat 214  Q
    ||||| ||||| || ||||| ||| |||| || || ||| || ||||||| ||||||||   |||||||||||  ||| ||| ||| ||||||||| | |    
T  27559193 atatgaccctcctctttgcaattaaagcacacgatgtcagcatgcttgcagtcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacct 27559094  T
Q  215 ccttggtacaaacattacttttgtggcctttctcgccaca 254  Q
    |||  | ||||||| |||| |||||||||||||| |||||    
T  27559093 cctcaggacaaacagtactcttgtggcctttctcaccaca 27559054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19486632 - 19486566
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaaca 67  Q
    ||||||||||||||||||||||||||||  ||||||||    ||||||||||| | ||| |||||||    
T  19486632 ttaaagaaacaagtacctctgataagtcggtcctcattaaatgtttgcgtaccagtcaatgcaaaca 19486566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 8658 - 8190
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | |  || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||     
T  8658 ttaaagaaacaagtacctctgataagtcgatcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgat 8559  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||||| ||||||||||||||| || || |  ||||||||||||||||||||||    ||| |||||||||||| |||||||    
T  8558 tgcactgcgaactgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaa 8459  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| | ||||| || ||| || |||  ||||||| |||||||||     
T  8458 acacttcttctcatccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctc 8359  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  ||||| |||||| |||||||||||||   |||||||||||||||||| |||| |||||| || | ||||| || ||| |||     
T  8358 ctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcccctgcggtcactcatcaccttgt 8259  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| || |||| || | ||||| | |||||  |||||||||||||||||||||| |||||||||    
T  8258 aatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagtttttgatcttct 8190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 18872 - 18404
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | |  || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||     
T  18872 ttaaagaaacaagtacctctgataagtcgatcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggttgat 18773  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||||| ||||||||||||||| || || |  ||||||||||||||||||||||    ||| |||||||||||| |||||||    
T  18772 tgcactgcgaactgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaa 18673  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| | ||||| || ||| || |||  ||||||| |||||||||     
T  18672 acacttcttctcatccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctc 18573  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  ||||| |||||| |||||||||||||   |||||||||||||||||| |||| |||||| || | ||||| || ||| |||     
T  18572 ctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcccctgcggtcactcatcaccttgt 18473  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| || |||| || | ||||| | |||||  |||||||||||||||||||||| |||||||||    
T  18472 aatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagtttttgatcttct 18404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 16831949 - 16831570
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| | ||| |||||||| || ||||| ||||||||||||||||| || |    
T  16831949 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctgtg 16831850  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | |||||||||||||||||| ||||||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  16831849 tgcactgtgtactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcagtccgctaacacgtgacccttctgaccacacctgaa 16831750  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||||||  || || ||     
T  16831749 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctc 16831650  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||  ||||| |||||  ||||||| |||||   |||||| ||| |||||||||||| ||| |||||    
T  16831649 ctctcatcattaagtctctgcttacccttatcagcaggggcactatacggcttaggatgactctgctgtcccttacctct 16831570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 17189082 - 17189566
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| || |||||||| |  ||||||||||| | ||| ||||||||||||||||||||||||| |||||| || ||||    
T  17189082 ttaaagaaacaagtacctctgataagcctgtcctcattagtagtttgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgag 17189181  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| |||||||| |||||||| ||||  || ||||| || || | |||||| | |||||| | ||| |||  ||| || ||||||||| |||||||    
T  17189182 tacactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaa 17189281  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||| ||||||  ||||||| |||||  ||     
T  17189282 gcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttggacctc 17189381  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| | ||  ||||| ||||||  |||||||||||||  ||||||||||||||||||||| | ||||||||| | ||||| || ||| |||     
T  17189382 ctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacgactctgctggcccttgcctctgcggtcactcatcaccttgt 17189481  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
    ||| |||| | ||||| |||| ||||| | | ||| |||||||||| ||| |||||||||||||||||| | | |||||||||||    
T  17189482 aatgagcttttgtgtcctcttcatagattctacagctacttaccaactcaaagaagtttctgatcttctggtatccaatagccct 17189566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 24190012 - 24190495
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| || ||||| || |  || |||||||| | ||| |||||| |||||||||||||||||| |||||| || ||||    
T  24190012 ttaaagaaacaagtacctctgataagcctgtcctcgttagtagtctgcgtaccagtcaacgcaaactctttcccaccggttctaatcttctttggctgag 24190111  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| |||||||| |||||||| ||||  || ||||| || || | |||||| | |||||| | ||| |||  ||| || ||||||||| |||||||    
T  24190112 tacactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaa 24190211  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||| ||||||  ||||||| ||||   ||     
T  24190212 gcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttgtacctc 24190311  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| | ||  ||||| |||||| ||||||||||||||  ||||||||||||||||||||| | ||||||||| | ||||  || ||| |||     
T  24190312 ctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcggacgactctgctggc-cttgcctctgcggtcagtcatcaccttgt 24190410  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
    ||| |||| ||||||| |||| ||||| | | ||| |||||||||| |||||||||||||||||||||| | | |||||||||||    
T  24190411 aatgagctttcgtgtcctcttcatagattctacagctacttaccaaatcagagaagtttctgatcttctggtatccaatagccct 24190495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 73 - 380
Target Start/End: Complemental strand, 16384721 - 16384414
Alignment:
Q  73 ccaccggttctaaccttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagcta 172  Q
    ||||| ||||||||||||||||| || |||||||||| ||||||||||||||||||||| || ||||||||||| | ||||||||||||||||||||| |    
T  16384721 ccaccagttctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaatcagcca 16384622  T
Q  173 acacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttc 272  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||| ||    
T  16384621 acatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacacttaaaacaaactatctc 16384522  T
Q  273 agcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctc 372  Q
    ||||||||  |||||||  || || || ||||||||||| ||||  ||||| |||||| ||||||| ||||||   ||||| ||||||||||| |||| |    
T  16384521 agcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtatggcttaggacgactctgttgtccc 16384422  T
Q  373 ttgcctct 380  Q
    || |||||    
T  16384421 ttacctct 16384414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 31941611 - 31942079
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||| |||||||| || ||||| || |||||||||||||| || |    
T  31941611 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcg 31941710  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||||||||| |||||||| ||||| || || | ||||||||||||||| |||||||    ||| |||||||||||| |||||||    
T  31941711 tacactatgaactgatatggccctcctcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaa 31941810  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||||  | |||||  ||||| ||     
T  31941811 acacttcttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctc 31941910  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |     ||||| || ||| |||||||||||||   |||||||||||||||||||| ||  ||||  || |  |||| || ||| ||      
T  31941911 ctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctatcctttgctccttcgatcactcatcaccttat 31942010  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| ||||||| || | ||||| | ||||| |||||||||||||||||||||||||||||||||    
T  31942011 aatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttct 31942079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 31692606 - 31692138
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  |||||||| || ||||| || |||||||||||||| || |    
T  31692606 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgcg 31692507  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||||||||| |||||||||||||| || || | |||||||| |||||| |||||||    ||| ||||||| |||| |||||||    
T  31692506 tacactgtgaactgatatggccctcctcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaa 31692407  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||  | ||||| || ||||||| ||  | |||||  ||||| ||     
T  31692406 acacttcttctcatctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctc 31692307  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |     ||||| || ||| |||||||||||||   |||||||||||||||||||||||  ||||  || |  |||| || ||| ||      
T  31692306 ctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttat 31692207  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| ||||||| || | ||||| | ||||| |||||||||||||||||||||||||||||||||    
T  31692206 aatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttct 31692138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 12357948 - 12357480
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||||||| ||||||||||||||||| |    
T  12357948 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtg 12357849  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||||||||||| || |  || || ||||| |||||||||||   ||| || ||||||||| |||||||    
T  12357848 tacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaa 12357749  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||   ||| |||||||| ||||||||||| |||||||||||  ||||||| || ||||||||||| ||||||| |||||| ||     
T  12357748 gcacttcttctcatctttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctc 12357649  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  | ||| |||||| |||||||||||||    || || ||||||||||| |||| ||| ||||| |  |||| || ||| |||     
T  12357648 ctctcatcattcagcctctactttcccttgtcagcaggagcactatatggtttaggacgactctgatgtcccttacctctgcgctcactcatcaccttgt 12357549  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| | ||||| |||| ||| |   ||||| |||| ||||| ||||||||  |||| |||||||    
T  12357548 aatgagctttagtgtcttcttcatatatcctgcagctactcaccaaatcagagaaaattcttatcttct 12357480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 18131768 - 18131399
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  | ||||||||| ||||||||||||||||||||| ||||||    
T  18131768 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagtaaacactttaccaccggttctaaccttcttcagttgag 18131669  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| |  || ||||||||||||||||| |||| ||| |||||||| |||| ||||||  |||| || ||||||||| |||||||    
T  18131668 tacactgcgaactaatatgactttcctcattgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaa 18131569  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||   |||||||||||| |||||||||||||||||||||||  ||||| | || ||| ||||||  ||||||| |||||| ||     
T  18131568 gcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctc 18131469  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||| ||| ||||  || || || ||| |||||||||||||    || || ||||||||||||||||    
T  18131468 ctctcattattcagtctctgttttcctttgtcagcaggagcactatatggtttaggacgactctgctgtc 18131399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 8744811 - 8744532
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| || |  |||||||| || || || ||||| | ||| ||||| ||||| |||||   |||||||||||||||||| |    
T  8744811 ttaaagaaacaagtacctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggttgtg 8744712  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| |||||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||| | |||||    
T  8744711 tgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaa 8744612  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
     |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  8744611 acacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 8744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 13944732 - 13945011
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| || |  |||||||| || || || ||||| | ||| ||||| ||||| |||||   ||||||||||||||| || |    
T  13944732 ttaaagaaacaagtacctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtg 13944831  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| |||||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||| | |||||    
T  13944832 tgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaa 13944931  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
     |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  13944932 acacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 13945011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 377
Target Start/End: Complemental strand, 16327130 - 16326752
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| |||||||  |||||||| |  || |||||||| | ||| |||||||| || ||||| ||||||||||||||||| | ||    
T  16327130 ttaaagaaacaagtacctctaataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacacctttccaccagttctaaccttcttcggcttag 16327031  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| |||||| |||||||||| ||||| || || || |||||||| || ||||||||   ||| |||||||||||| |||||||    
T  16327030 tacactgcgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaa 16326931  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaacta-tttcagcaggag-tgtctctccccttgggtc 298  Q
     || ||| |||||||  |   ||||||||| || ||||||||||| || ||||||||| | ||||| | | ||||||||||  |||||||| ||||||||    
T  16326930 acatttcctctcatctctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtc 16326831  T
Q  299 ttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcc 377  Q
    | || |||||||| |    |||||| || ||| ||||||||||||||   ||||| |||||||||||||||| ||||||    
T  16326830 tcctatcatcattcaccttttgctttcctttgtcagcaggagcactgtcaggcttaggacgactctgctgtcccttgcc 16326752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 16825700 - 16825232
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| || ||||||||||| || || |    
T  16825700 ttaaagaaacaagtacctctgataagtcagtcctcattcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcg 16825601  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | |||||  |||||||||| || || |||||| |||| ||||| || || || |||||||| |||||||||||   ||| || || | |||| |||||||    
T  16825600 tacactgcaaactgatatgaccttcctcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaa 16825501  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||   |  |||||||||||| ||||||||||| || |||||||| || ||||| || |||| |||||  ||||||  |||||| ||     
T  16825500 gcacttcttctcatcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcctc 16825401  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    |||||||| || | ||  | ||| |||||| ||| ||| |||||   |||||||||||||||| |||||| ||||||||| |  |||| || ||| |||     
T  16825400 ctctcatctttcaatctctacttacccttgtcaggaggggcactatacggcttcggacgactcagctgtcccttgcctctgcgctcactcatcaccttgt 16825301  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| |||| || |||| |||||   | ||| | |||||||| ||||| |||||||| |||||||    
T  16825300 aatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagtttcttatcttct 16825232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 12181052 - 12181431
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||| | | ||||| |||||| | ||| ||||||||||| |||||||| ||||||||||||||||| |    
T  12181052 ttaaagaaacaagtacctctgataagtcggtcctcactagtggtttacgtaccagtcaaagcaaacactttaccaccggtcctaaccttcttcggttgcg 12181151  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| || || |  ||||| ||||| || || || || ||| |||| ||||||||||    ||| || ||| ||||| | |||||    
T  12181152 tacactacgaactgatatgaccttccttgttgcaattataacaaacaatgtccccaagcttacaatcagctagtgtgtgtcctttccgaccacaactgaa 12181251  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||| || ||||| ||||||||||| || |||||||| |||||||  || |||| |||||  ||||||| |||||  ||     
T  12181252 gcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagcatctctcctcttggtcctc 12181351  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    |||||||||||||  |  | ||| |||||| |||||||||||||   ||||||| |||||||||| |||| |||||||||    
T  12181352 ctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgactctgttgtcccttgcctct 12181431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 17494355 - 17494666
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||  | |||||| |   |||||||||||| | ||  ||||||||||| |||||||| |||||||||||||||||||    
T  17494355 ttaaagaaacaagtacctctgataagcatgtcctcactaatggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgag 17494454  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || || |||||||||||||| || || || |||| ||| || |||||||    ||| || ||||||||| ||||| |    
T  17494455 tacactgcgaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctg-a 17494553  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||||||||||| ||||||||||| || ||||| || |||||||| || |||| | |||  ||||||| |||||| ||     
T  17494554 gcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcctc 17494653  T
Q  301 ctctcatcattta 313  Q
    |||||||||||||    
T  17494654 ctctcatcattta 17494666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 14290953 - 14290574
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  ||||||||||||| | ||| |||||||| || ||||| || | ||||||||| || |       
T  14290953 ttaaagaaacaagtacctctgataagtcggtcctcattcacggtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttaggcttct 14290854  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| ||||||||||  || |||||||| |  | ||| |||||||| |||||||||||   ||| || ||||| ||| |||| ||    
T  14290853 tgcactgcgagctaatatgtccctcttcatcacaattatagcaaataacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaa 14290754  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||      ||| |||||||| |||||||||||||| |||||||| |||||||  || |||| |||||  ||||||| ||| || ||     
T  14290753 gcacttcttctcatctcaatcacacacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctc 14290654  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| || |  || || || ||| |||||||||||||   ||| ||||||||||||||||||| ||| |||||    
T  14290653 ctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgactctgctgtcccttacctct 14290574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 11949346 - 11949107
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||  ||||||| | | |||||||||||| | ||  ||||||||||| |||||| | |||||||||||||  |  |    
T  11949346 ttaaagaaacaagtacctctgataagttgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccgatcctaaccttcttcgtctacg 11949247  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | |||||  ||||||| || || || ||||||||||||||||| || | ||| || ||||| ||||||||||| | ||| || ||||||||| | |||||    
T  11949246 tacactgcaaactgatgtgaccttcctcattgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaa 11949147  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtgg 240  Q
    ||||||||||||||| || |||||||||||||| ||||||    
T  11949146 gcacttcttctcatctttagtacaaacattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 11958602 - 11958223
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||||||||||||||| ||| |||||||||| ||||    
T  11958602 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgag 11958503  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| |  ||||| |||||||| ||||| || || ||  ||||||| || |||||||     || || ||||||||| |||||||    
T  11958502 tacactatgaactgatatgactttcttcgttgcagttgtagcagacaatgtcctcacgcttacattcagctagtgtatgtcctttctgaccacacctgaa 11958403  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||| |||||||  |   |||| |||| |||||||||||||| || ||||||||| | ||||| |||||||||||||  ||||||| |||  | ||     
T  11958402 acacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcatctctcctcttaagcctc 11958303  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    || |||||||| | ||  || || || ||| ||||||||||||||   || || |||||| ||||||||| ||| |||||    
T  11958302 ctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgctgtcccttacctct 11958223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 35982889 - 35983268
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||| ||||||||||||  ||||||||  | ||||||||| | | ||| |||||||| || ||||| || ||||||||||| || || |    
T  35982889 ttaaagaaacaagtatctctgataagtcggtcctcattcaccgtttgcgtaacagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcg 35982988  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | || || ||||| ||||| || || ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||| ||| | |||||    
T  35982989 tacaatgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaa 35983088  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
     ||||||||||||| || ||| ||| |||||||| |||||||||||||| |||||||| |||||||  ||  ||| |||||  ||||||| ||| || ||    
T  35983089 acacttcttctcat-ctcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggagcatctctcctcttaggcct 35983187  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
     ||||||||||| || |  || || || ||| |||||||||||||   ||| ||||||| ||||||||||| ||| |||||    
T  35983188 cctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacaactctgctgtcccttacctct 35983268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 47126652 - 47126960
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||| || |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  47126652 ttaaagaaacaagtacctctgataagtcggtcctcgttaggagtctgcgtaccagtcaaagcaaacaccttaccaccaattctagtcttcttcggctcag 47126751  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  47126752 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 47126851  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  47126852 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 47126951  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  47126952 ctatcatca 47126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 28757027 - 28757335
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || ||  |||||  ||||||||| | ||    
T  28757027 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcag 28757126  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| || ||| ||||||| || || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  28757127 gacactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 28757226  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  28757227 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 28757326  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  28757327 ctatcatca 28757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 10408676 - 10408984
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||   |||||||| |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  10408676 ttaaagaaacaagtacctctgataagttggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcag 10408775  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  10408776 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 10408875  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||| ||  | ||||| || ||||| ||||  ||||||| |||||| ||     
T  10408876 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctc 10408975  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  10408976 ctatcatca 10408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 362
Target Start/End: Complemental strand, 13317867 - 13317629
Alignment:
Q  124 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtac 223  Q
    |||||||| |||||||| || || | ||| |||||||||||||| ||||| || ||||| || |||||| | ||||| |||||||||||||| ||||| |    
T  13317867 tcttcattacagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatctttggtgc 13317768  T
Q  224 aaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgctt 323  Q
    ||||||||||||||||||||||  | ||||||||  | ||||| |  ||| ||||||  ||||||||| | || || ||||||||||||| |  ||| ||    
T  13317767 aaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttgttt 13317668  T
Q  324 gcccttgccagcaggagcactgagcggcttcggacgact 362  Q
     || ||| ||||||||||||||   |||||||| |||||    
T  13317667 tcctttgtcagcaggagcactgtagggcttcgggcgact 13317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 10417466 - 10417225
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || |||||||| | ||| ||||| ||||| || || ||||| |||||||| ||||| |    
T  10417466 ttaaagaaacaagtacctctgataagtcgatcctcattggtagtctgcgtaccagtcaaagcaaatacttttcctccagttctgaccttcttaggttgcg 10417367  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
     |||||| ||||| || || ||||| |||   |||||| | || || ||||| |||||||||||||| || ||||| ||||| ||||||||  | |||||    
T  10417366 ggcactgcgaactaatgtgaccctcatcaccacagttaaaacaaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaa 10417267  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| |  || ||| ||||||| ||||||||    
T  10417266 acatttcttctcatcttgagtgcaagcattactcttgtggcc 10417225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 12857916 - 12857536
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| ||   | ||||||| || |       
T  12857916 ttaaagaaacaagtacctctgataagtcg-tcctcattaacagtttgcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcc 12857818  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||  || || ||||| || |||||||  || || ||||| || ||||||| ||||||||| |||||||  | ||| || ||||  ||| | | |||    
T  12857817 tgcactacgagctaatatgaccttcttcatcacaattgtagcaaacaatatcacgacgcttgcactcagctattatgtgtcctttctttccacatcggaa 12857718  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||   |  ||| ||||||||  ||||||| || || |||||||| || || || || |||| |||||  |||||||  || || ||     
T  12857717 acacttcttctcatcacagtcacatacattactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctc 12857618  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    ||||||||||| |||| ||| || || ||| |||||||||||||   ||| || |||||||||| ||||| |||||||||||    
T  12857617 ctctcatcattcagtccttgtttacctttgtcagcaggagcactatacggttttggacgactctactgtcccttgcctctac 12857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 311
Target Start/End: Complemental strand, 15008855 - 15008695
Alignment:
Q  148 atatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttct 247  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||| | | ||||||||||| |||| | |||   ||||||||||| ||||||||| |||    
T  15008855 atatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttctcctcaccattg---caaacattactcttgtggcctctct 15008759  T
Q  248 cgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
    | ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||||    
T  15008758 caccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcatt 15008695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13317955 - 13317863
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttc 93  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| | ||| ||||||||||| ||||| ||||| |||||||||    
T  13317955 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctgaccttcttc 13317863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 11861151 - 11861304
Alignment:
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||||  ||||| |||||||| ||| | ||  |||| || ||||||| | ||||||||||||||||    |||||||||| |||| ||| |||    
T  11861151 tgcactgagaaccaatatgaccctcttccttggaattgaagcacacaatatcactatgcttgcaatcagctaaagtatgacccttcttaccacaccagaa 11861250  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccaca 254  Q
     || |||||| | ||||  | ||||||||| || |||||||||||||| |||||    
T  11861251 acatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccaca 11861304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 12501731 - 12501884
Alignment:
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||||  ||||  |||||||| ||||| ||  | || || ||||||||| ||||||||||||||||   |||||||||||  ||| ||| |||    
T  12501731 tgcactgagaaccaatatttccctcttccttgcaattgaaacacacaatatcaccatgcttgcaatcagctaatgtgtgacccttcttgccacaccggaa 12501830  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccaca 254  Q
     || |||||  | ||||  | ||||||||| || ||||||||||||||||||||    
T  12501831 acatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccaca 12501884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 221 - 344
Target Start/End: Original strand, 15230531 - 15230654
Alignment:
Q  221 tacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttg 320  Q
    ||||||||||||| |||||||| || || ||||||||  ||||||| || |||||||||   ||| | | ||| || || ||||||||||||| || |||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15230630  T
Q  321 cttgcccttgccagcaggagcact 344  Q
    ||| || ||| |||||||||||||    
T  15230631 cttccctttgtcagcaggagcact 15230654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 221 - 344
Target Start/End: Original strand, 15236399 - 15236522
Alignment:
Q  221 tacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttg 320  Q
    ||||||||||||| |||||||| || || ||||||||  ||||||| || |||||||||   ||| | | ||| || || ||||||||||||| || |||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15236498  T
Q  321 cttgcccttgccagcaggagcact 344  Q
    ||| || ||| |||||||||||||    
T  15236499 cttccctttgtcagcaggagcact 15236522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 2037111 - 2037025
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 2040852 - 2040766
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 14039676 - 14039762
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 14039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12509904 - 12509867
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatt 38  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  12509904 ttaaagaaacaagtacctctgataagtcggtcctcatt 12509867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15230311 - 15230348
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatt 38  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  15230311 ttaaagaaacaagtacctatgataagtcaatcctcatt 15230348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15236179 - 15236216
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatt 38  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  15236179 ttaaagaaacaagtacctatgataagtcaatcctcatt 15236216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 479
Target Start/End: Original strand, 8722 - 9200
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | |  || |||||||| | ||| |||||||||||||||||||| |||||||||||||||||||    
T  8722 ttaaagaaacaagtacctctgataagtcgatcctcactagtagtatgcgtaccagtcaatgcaaacactttcccaccggtactaaccttcttcggttgag 8821  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||| ||||| |||||||| ||||| || || ||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  8822 tgcactgcgaactgatatggccttcttcgttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 8921  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| || |||||||||||||| |||||||| ||||||||||||||| | ||||| || ||| ||||||  ||||||| ||||||||||    
T  8922 acacttcttctcatctttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtctt 9021  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| ||    ||||| || ||| |||||||||||||   |||||||||||||||||||||||  ||||  || |  |||| || ||| |       
T  9022 ctctcatcattcagcttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcacctaat 9121  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaat 479  Q
    ||| || | ||||||| || | ||||| | ||||| ||||||||||||||||||||||| ||||||||| | |||||||    
T  9122 aatgagatttcgtgtcctcctcatagattatgcagctacttaccaattcagagaagtttttgatcttctggtacccaat 9200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 40166 - 40535
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| ||||| |  |||||||| |  || |||||||| | ||| ||||||||||||||||||||||||||||||||||| || |    
T  40166 ttaaagaaacaagtacctctaataagacggtcctcattggtagtctgcgtaccagtcaaagcaaacactttcccaccggttctaaccttcttcggctgtg 40265  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||| | ||||| |||||||||||| ||||||| ||||||||||| |||| |||||||    
T  40266 tgcactgagtactgatatggccctcttcgttgcagttataacatacaacatcacaacgcttgcaatccgctaacatgtgacccttctaaccacacctgaa 40365  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| | || ||||| ||||||||||  |||||||  || || ||     
T  40366 gcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacacttataacagactatctcagcaggagcatctctcctattcggcctc 40465  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| |||| |||||| |||||| ||||||| ||||||  ||| || ||||||||||| ||||    
T  40466 ctctcatcattcagtctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgttgtc 40535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 3e-98; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 22027916 - 22027547
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||||| ||| ||||||||||| ||||||||||||||||||||||| || |    
T  22027916 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcgtaccggtcaatgcaaacacttttccaccggttctaaccttcttcggctgtg 22027817  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |  || || | ||| |||||||||||   |||||||||||||||| |||||||    
T  22027816 tgcactgagaactgatatggccctcttcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaa 22027717  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||  | |||||||| ||||||||||  |||||||  ||||| ||     
T  22027716 gcacttcttctcatctttggtacaaacattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctc 22027617  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| | || |||||| |||||| ||||||| ||||||  ||| || ||||||||||||||||    
T  22027616 ctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtc 22027547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 22054008 - 22054387
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| | ||| ||||||||||| ||||| |||||| |||||||||| || |    
T  22054008 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctatccttcttcggctgtg 22054107  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | |||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||| ||||| | |||||||||||||||| | |||||    
T  22054108 tgcactgtgtactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctgaccacatctgaa 22054207  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||  |||||||  || || ||     
T  22054208 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcagaagcatctctcctattcggcctc 22054307  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||  ||||| |||||  ||||||| ||||||  |||||| |||||||||||| ||| ||| |||||    
T  22054308 ctctcatcattaagtctctgcttacccttatcagcaggggcactgtacggcttaggacgactctgccgtcccttacctct 22054387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 16268860 - 16268604
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| ||||||||||| ||||| |||||| |||||||||| | ||    
T  16268860 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaacacttttccaccagttctagccttcttcggctcag 16268761  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| |||||| ||||||| || ||||| || ||||| ||||||||||| |||||||     ||||||||||||||| |||||||    
T  16268760 gacactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaa 16268661  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| ||||||| ||   |||||||||||| |||||||||||||| ||||||||    
T  16268660 gcacttcctctcatctttaccacaaacattactcttgtggcctttctcaccacactt 16268604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 31414168 - 31413799
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || ||| |||| | ||| |||||||||||||||||||||||| |||||||||  ||||    
T  31414168 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcataccagtcaatgcaaacactttcccaccggttctagccttcttcgactgag 31414069  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||| |||| ||    
T  31414068 tacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaa 31413969  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||| |||||||  |   |||| |||| || || |||||||| || |||||||| || ||||| |||||| ||||||  ||||||| |||||| ||     
T  31413968 acacttcctctcatctctaccacaagcattgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctc 31413869  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| | ||  ||||| |||||| ||||||| || |||   || || ||||||||||||||||    
T  31413868 ctctcatcattcattctctgctttcccttgtcagcaggggcgctgtaaggtttaggacgactctgctgtc 31413799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 29301062 - 29300788
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||||  || |||||||| | ||| | |||||||||||||||| | ||| |||||||||| ||||    
T  29301062 ttaaagaaacaagtacctctgataagtcggtcctcatttgtagtctgcgtacccgtcaatgaaaacactttcccaccgatcctagccttcttcggctgag 29300963  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||||||||||||||| || |||||||||||||||||| | || || || |||||||| || |||||||    ||| ||  |||||||| |||| ||    
T  29300962 tacactgagaactgatatgaccttcttcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaa 29300863  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagc 275  Q
     |||||| | |||||  |   |||| |||| || ||||||||| | || ||||||||||| ||||| ||||||||    
T  29300862 acacttcctttcatctctaccacaagcattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagc 29300788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 28984056 - 28984312
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || || ||||| | ||  |||||||| || |||||  |||||  ||||||||| | ||    
T  28984056 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgtgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggctcag 28984155  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  28984156 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 28984255  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||    
T  28984256 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 28984312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 22374014 - 22374393
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||| ||||| | ||| |||||||| || ||||| |||  | ||||||| || |       
T  22374014 ttaaagaaacaagtacctctgataagtcggtcctcattaacagtttgggtaccagtcaaagcaaacaccttgccacctgttagagccttcttaggcttcc 22374113  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| || |||||||  || |||||||| || ||||||||||||||||||||||||||   ||| || ||||  ||| |||| ||    
T  22374114 tgcactgcgagctaatatgaccttcttcatcacaattatagcaaacaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaa 22374213  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||| |||||   |  ||| |||||||| |||||| |||| || |||||||| || || || || |||| |||||  ||||||| | | || ||     
T  22374214 acacttcttttcatcacggtcacatacattactcttgtggtctttttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctc 22374313  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||| ||||| |||| ||| || || ||| ||||||| |||||   ||| ||||||||||||| ||||| ||| |||||    
T  22374314 ctctcctcattaagtctttgtttacctttgacagcaggggcactatacggtttcggacgactctactgtcccttacctct 22374393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 21928573 - 21929057
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  || |||||  | |||||| |||  | ||| |||||||| || ||||| || | ||||||||| || |       
T  21928573 ttaaagaaacaagtacctctgataagtcggtcttcattcacagtttgcttactagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttct 21928672  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| || || || ||||| ||||||||||  || |||||||| || | ||||||||||||||||||| | ||   ||| || ||||| ||| | |||||    
T  21928673 tgcattgtgagctaatatgcccctcttcatcacaattatagcaaacgacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaa 21928772  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
     |||||||||||||| | ||| ||  |||||||| | |||||| || ||||||||||| || ||||  || |||| |||||  ||||||| | | || ||    
T  21928773 acacttcttctcatc-tcggtcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcct 21928871  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     ||||||||||| || |  || || || ||| |||||||||||||   ||| || ||||||||||| |||| ||| |||||||  |||| || ||| |||    
T  21928872 cctctcatcattcagcctctgttttcctttgtcagcaggagcactatacggtttaggacgactctgttgtcccttacctctacgctcactcatcaccttg 21928971  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
     ||| |||| | || || |||| ||||| | | ||| | |||||||||||||| || ||||| |||||||   | |||||||||||    
T  21928972 taatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttcttatcttctgataaccaatagccct 21929057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 311
Target Start/End: Complemental strand, 6607045 - 6606795
Alignment:
Q  61 gcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgct 160  Q
    |||||||| || ||||| || ||||||||||| || || || ||||| ||||||| ||| || |||||||  || ||  |||| || ||||| |||||||    
T  6607045 gcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagcaaacaatatccccacgct 6606946  T
Q  161 tgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaa 260  Q
    |||| ||||||| |   || |||||||  ||| | | ||||||||||||||| ||     | ||||||||||| |||||||| ||||| ||||||||  |    
T  6606945 tgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgta 6606846  T
Q  261 gcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
    |||||| || |||| ||||   ||||| | ||| ||||| |||||||||||    
T  6606845 gcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcatt 6606795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 361
Target Start/End: Original strand, 20391454 - 20391591
Alignment:
Q  224 aaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgctt 323  Q
    |||||||||| |||||||| ||||| ||||||||  ||||||| || |||| ||||   ||||| | ||| ||||| ||||||||||| | || ||| ||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgttt 20391553  T
Q  324 gcccttgccagcaggagcactgagcggcttcggacgac 361  Q
     || ||| ||||||||||||||   |||||||||||||    
T  20391554 ccctttgtcagcaggagcactgtagggcttcggacgac 20391591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 20391231 - 20391307
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccacc 77  Q
    ||||||||||||||||||||||||||||  ||||||||  | || |||||||| | ||| |||||||| || |||||    
T  20391231 ttaaagaaacaagtacctctgataagtcggtcctcattaactgtctgcgtaccagtcaatgcaaacacctttccacc 20391307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28989275 - 28989393
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || || ||||| | ||  |||||||| || |||||  |||||  ||||||||| | ||    
T  28989275 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgtgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggctcag 28989374  T
Q  101 tgcactgagaactgatatg 119  Q
      ||||| |||||||||||    
T  28989375 gacactgtgaactgatatg 28989393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 30310559 - 30310501
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
    |||||||||||| |||||||||||||||||||| || || ||||| || || |||||||    
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggag 30310501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 263334 - 263713
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| ||||| || |||||||| |  || |||||||| | ||| ||||||||||| ||||  ||||||||||||||||  || |    
T  263334 ttaaagaaacaagtacctctaataagcctgtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtg 263433  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | |||||||||||||||||| || |||||||| ||||| | |||||||  ||||||||| ||||| | |||||||||||||||| |||||||    
T  263434 tgcactgtgtactgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaa 263533  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||||||    ||| ||     
T  263534 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctc 263633  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||  ||||| |||||| ||||||| ||||||  ||||||  ||||||||||||||| ||| |||||    
T  263634 ctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagacgactctgctgtcccttacctct 263713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 203489 - 203868
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| ||||| || |||||||| |  || |||||||| | ||| ||||||||||| ||||  ||||||||||||||||  || |    
T  203489 ttaaagaaacaagtacctctaataagcctgtcctcattagtagtctgcgtaccagtcaaagcaaacacttttccactagttctaaccttcttcgactgtg 203588  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | |||||||||||||||||| || |||||||| ||||| | |||||||  ||||||||| ||||| | |||||||||||||||| |||||||    
T  203589 tgcactgtgtactgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaa 203688  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||  |||||||    ||| ||     
T  203689 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcaccaggagcatctctcctaacgggcctc 203788  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||  ||||| |||||| ||||||| ||||||  |||||| |||||||||||||||| ||| |||||    
T  203789 ctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacctct 203868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 424512 - 424587
Alignment:
Q  97 tgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagcta 172  Q
    ||||| ||||| |||||||| || |||||||||||||||||| | || || || ||  ||||||||||||||||||    
T  424512 tgagtacactgtgaactgatgtgaccctcttcattgcagttaaaacacacaatgtcctcacgcttgcaatcagcta 424587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 5e-91; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 23274303 - 23274684
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | ||||||| |||| | ||  ||||||||||| ||||| || ||||||||||||||||| |    
T  23274303 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcataccagtcagagcaaacactttaccaccagtcctaaccttcttcggttgtg 23274402  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||   ||| |||||||| ||| |||||||    
T  23274403 tgcactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaa 23274502  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||   |||||| ||||||| |||||  ||||||| |||||| ||     
T  23274503 gcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcctc 23274602  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    |||||||||||||  |  ||||| |||||| |||||||||||||   | |||||||||||||||| |||| |||||| ||||    
T  23274603 ctctcatcatttaacctctgcttacccttgtcagcaggagcactatactgcttcggacgactctgttgtcccttgcccctac 23274684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 23097751 - 23097407
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||| ||||||||||| ||||| || |||||||| |  || |||||||| | ||| |||||||| |||||||| ||||||| |||||| || ||||    
T  23097751 ttaaagaatcaagtacctcttataagcctgtcctcattagtagtctgcgtaccagtcaaagcaaacaccttcccaccagttctaatcttctttggctgag 23097652  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||| |||||||| ||||  || ||||| || || | |||||| | |||||| | ||| ||   ||| || ||||||||| || ||||    
T  23097651 tgcactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacttgaa 23097552  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||| ||     
T  23097551 gcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagcaggagcatctctcctcttgggcctc 23097452  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    ||||||||||| ||||||||||| |||||| ||||||| ||||||    
T  23097451 ctctcatcattcagtcgttgctttcccttgtcagcaggggcactg 23097407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 19716750 - 19716371
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||  |||||| | |  || |||||||| | ||| ||||||||||||||||||||||||||||||||||| || |    
T  19716750 ttaaagaaacaagtacctttgataagtcggtcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtg 19716651  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||||||||  ||||||||||| || || | ||||| |||||||||||||||||    ||| || ||||||||| |||||||    
T  19716650 tgcactgcgaactgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 19716551  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| || |||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||||  |||||||  ||||| ||     
T  19716550 acacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctc 19716451  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| | ||  ||||| |||||| || || | ||||||   || || |||||||||||||||| ||| |||||    
T  19716450 ctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctct 19716371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 19721313 - 19720934
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||  |||||| | |  || |||||||| | ||| ||||||||||||||||||||||||||||||||||| || |    
T  19721313 ttaaagaaacaagtacctttgataagtcggtcctcactagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggctgtg 19721214  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||||||||  ||||||||||| || || | ||||| |||||||||||||||||    ||| || ||||||||| |||||||    
T  19721213 tgcactgcgaactgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 19721114  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| || |||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||||  |||||||  ||||| ||     
T  19721113 acacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctc 19721014  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| | ||  ||||| |||||| || || | ||||||   || || |||||||||||||||| ||| |||||    
T  19721013 ctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctct 19720934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 12577063 - 12577342
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| || |  |||||||| || || || ||||| | ||| ||||| ||||| |||||   ||||||||||||||| || |    
T  12577063 ttaaagaaacaagtacctctgatgaggcggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtg 12577162  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| || ||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||| | |||||    
T  12577163 tgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaa 12577262  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
     |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  12577263 acacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 12577342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 20848299 - 20848555
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  20848299 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcag 20848398  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  20848399 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 20848498  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||    
T  20848499 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 20848555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 28350807 - 28350945
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgct 322  Q
    ||||||||||| |||||||||||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| ||||||||||| | || |||||    
T  28350807 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 28350906  T
Q  323 tgcccttgccagcaggagcactgagcggcttcggacgac 361  Q
      || ||| || ||||||||||    |||||||||||||    
T  28350907 cccctttgtcaacaggagcactatagggcttcggacgac 28350945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 24657244 - 24657138
Alignment:
Q  148 atatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttct 247  Q
    ||||||||| | ||||||||||||||   |||||||||||  ||| ||| ||| ||||||||| | ||||  | ||||||| |||| |||||||||||||    
T  24657244 atatcaccatgtttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttct 24657145  T
Q  248 cgccaca 254  Q
    | |||||    
T  24657144 caccaca 24657138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 345
Target Start/End: Original strand, 21901469 - 21901591
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgct 322  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||| ||||   ||||| | ||| ||||| ||||||||||| | ||  || |    
T  21901469 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtt 21901568  T
Q  323 tgcccttgccagcaggagcactg 345  Q
    | || ||| ||||||||||||||    
T  21901569 tccctttgtcagcaggagcactg 21901591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 23205245 - 23205277
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccaca 254  Q
    |||||||||||| ||||||||||||||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccaca 23205277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 23676849 - 23676881
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccaca 254  Q
    |||||||||||| ||||||||||||||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccaca 23676881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 2044 - 1680
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| || |||||| | || || |||||||  | ||| ||||||||||||||||||||||||| |||||| || ||||    
T  2044 ttaaagaaacaagtacctctgataagcctgtcctcaatagcagtctgcgtactagtcaaagcaaacactttcccaccggttctaatcttctttggctgag 1945  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||| |||||||| ||||  || ||||| || || | |||||| | |||||| | ||| ||   ||| || ||||||||| |||||||    
T  1944 tgcactgggaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaa 1845  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||  ||||||| |||||| |||    
T  1844 gcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagcagtagcatctctcctcttgggcctt 1745  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctg 365  Q
    ||||||||||| ||||||||||| |||||| ||||||| ||||||  |||||| |||||||||||    
T  1744 ctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctg 1680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 168; Significance: 8e-90; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 5 - 380
Target Start/End: Complemental strand, 6449 - 6074
Alignment:
Q  5 agaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgca 104  Q
    |||||||||||||||||||||| |  |||||||| |  || || ||||| | ||| ||||| || || ||||| ||||||||||||||| |||| |||||    
T  6449 agaaacaagtacctctgataagacggtcctcattagtagtctgtgtaccagtcaaagcaaatacctttccaccagttctaaccttcttctgttgtgtgca 6350  T
Q  105 ctgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcac 204  Q
    ||||| |||||| ||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  6349 ctgagtactgatgtggccctattcgttacaattatagcatacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcac 6250  T
Q  205 ttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctct 304  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||  ||||||  |||||||  || || || ||||    
T  6249 ttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcgacaggagcatctctcctattcggcctcctct 6150  T
Q  305 catcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||| |||| |||||| |||||| ||||||| ||||||  |||||| ||||||||||| |||| ||| |||||    
T  6149 catcattcagtctttgcttacccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttacctct 6074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 168; Significance: 8e-90; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 9982 - 9604
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| ||||  ||||| |  || |||||||| | ||| ||||||||||| ||||| |||||||||||||||||  | |    
T  9982 ttaaagaaacaagtacctctgataagcctata-tcattagtagtctgcgtaccagtcaaagcaaacacttttccaccagttctaaccttcttcggcagtg 9884  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | ||||||||||| |||||| ||||||||||| ||||| | |||||||||||||||||| ||||| | ||||||||||| |||| |||||||    
T  9883 tgcactgtgtactgatatggcactcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctaaccacacctgaa 9784  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||||||    ||| ||     
T  9783 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctc 9684  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||   |||| |||||  ||||||| ||||||  |||||| ||||||||||| |||| ||| |||||    
T  9683 ctctcatcattaagtctcagcttacccttatcagcaggggcactgtacggcttaggacgactctgttgtcccttacctct 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 5e-88; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 16150715 - 16151183
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||| ||||||||||| ||||||| | | ||| | |||||| | ||| |||||||||||||||||||||||||||||||||||||       
T  16150715 ttaaagaaacaagtacatctgataagtcgatcctcactagtggtctacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttct 16150814  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| || || || ||||| ||||||||||  ||||||||||| || | |||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  16150815 tgcattgcgagctaatatgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaa 16150914  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||  ||||||| |||||| ||     
T  16150915 gcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctc 16151014  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |     ||||| || ||| ||| |||||||||   |||||||||||||||||||||||  ||||| || |  |||| || ||| |||     
T  16151015 ctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcactcatcaccttgt 16151114  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| | ||||| || | ||||| | ||||| ||||||||||||||||||||||  |||||||||    
T  16151115 aatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcatgatcttct 16151183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 16154861 - 16155329
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||| ||||||||||| ||||||| | | ||| | |||||| | ||| |||||||||||||||||||||||||||||||||||||       
T  16154861 ttaaagaaacaagtacatctgataagtcgatcctcactagtggtctacgtaccagtcaatgcaaacactttcccaccggttctaaccttcttcggtttct 16154960  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| || || || ||||| ||||||||||  ||||||||||| || | |||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  16154961 tgcattgcgagctaatatgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaa 16155060  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||| || ||| ||||||  ||||||| |||||| ||     
T  16155061 gcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctc 16155160  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |     ||||| || ||| ||| |||||||||   |||||||||||||||||||||||  ||||| || |  |||| || ||| |||     
T  16155161 ctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcactcatcaccttgt 16155260  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| | ||||| || | ||||| | ||||| ||||||||||||||||||||||  |||||||||    
T  16155261 aatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcatgatcttct 16155329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 53750663 - 53750384
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| || |  |||||||| || || || ||||| | ||| ||||| ||||| |||||   ||||||||||||||| || |    
T  53750663 ttaaagaaacaagtacctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtg 53750564  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| |||||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||| | |||||    
T  53750563 tgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaa 53750464  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
     |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  53750463 acacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 53750384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 14993560 - 14993092
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | |||||||||||   ||| |||||||| || ||||| || ||||||||||| ||||| |    
T  14993560 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccattcaaagcaaacaccttgccacctgtcctaaccttcttaggttgcg 14993461  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||||| ||||| || | ||| ||| ||||||||||||||||   ||| || ||||||||| |||||||    
T  14993460 tacactgcgaactgatatgaccttcctcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaa 14993361  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||  ||   |  |||||||||||| ||||||||||| || |||||||| || ||||| || |||| |||||  ||||||| |||||| ||     
T  14993360 gcacttcttcttctcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctc 14993261  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| | ||  ||||| |||||| ||||||| |||||   ||||||| |||||||||| |||| |||||||||||  |||| || ||| |||     
T  14993260 ctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcagacgactctgttgtcccttgcctctacgctcactcatcaccttgt 14993161  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| || | || |||| ||| | | ||||  |||||||||| ||||| |||||||| |||||||    
T  14993160 aatgagctttcatatcctcttcataaattctgcaactacttaccaaatcagaaaagtttcttatcttct 14993092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 51603985 - 51603706
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| || |  |||||||| || || || ||||| | ||| ||||| ||||| |||||   ||||||||||||||| || |    
T  51603985 ttaaagaaacaagtacctctgatgagacggtcctcattagcagtctgtgtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtg 51603886  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| |||||||||||||| || |||||||| || | |||||| ||||||||||| |||| || |||||||||||| ||| | |||||    
T  51603885 tgcactgagtactgatgtggccctcttcattacaattatagcacacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaa 51603786  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
     |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  51603785 acacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 51603706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 461
Target Start/End: Original strand, 15266855 - 15267315
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||| |||||||||||||||| || ||| | |  |||||||||| ||  || |||||||| || |||||||| |||||||||||||| || |    
T  15266855 ttaaagaaacaactacctctgataagtctgtcttcactagttgtttgcgtactggttaaagcaaacaccttgccaccggtcctaaccttcttcggctgcg 15266954  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| || ||||| |||||||||||||| || || || ||| |||| ||||||||||    ||| || ||||||||| |||||||    
T  15266955 tacactacgaactgatatgaccttcttcgttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaa 15267054  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  ||  |||||||||||| || ||||| |||||  ||||||| |||||||| || |  | |||||  ||||||| |||||| ||     
T  15267055 gcacttcttctcatctctgtcacaaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcctc 15267154  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    |||||||||||||  |  ||||| |||||| |||||||||||||   |||||||||||||||||| |||| ||||||||| |  |||| || ||| |||     
T  15267155 ctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcctctgcgttcactcatcaccttgt 15267254  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttct 461  Q
    ||| |||| ||||||| || | ||| |   ||||| |||||| ||| ||||||||||||||    
T  15267255 aatgagctttcgtgtcctcctcataaatcctgcagctacttatcaaatcagagaagtttct 15267315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 20893110 - 20893486
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || ||||| ||||||||||||||||| | ||    
T  20893110 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaacacctttccaccagttctaaccttcttcggctcag 20893209  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| ||||||||||||||||| ||| | || ||||| ||||||||||| ||||||||   ||| |||||||||||| |||||||    
T  20893210 tacactgcgaactgatatgcccctcttcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaa 20893309  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| |||||||  |   ||||||||| || |||| |||||| || ||||||||  | ||||| || |||| |||||  ||||||| ||| || ||     
T  20893310 gcacttcctctcatctctaccacaaacattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctc 20893409  T
Q  301 ctctcatcatttagtcgt-tgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcc 377  Q
    || |||||||| | || | ||||| || ||| |||||||||||||    ||||| |||||||||||||||| ||||||    
T  20893410 ctatcatcattca-tcttctgctttcctttgtcagcaggagcactttaaggcttaggacgactctgctgtcccttgcc 20893486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 110 - 485
Target Start/End: Original strand, 18259629 - 18260004
Alignment:
Q  110 aactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttctt 209  Q
    |||||||||| || || ||||||||||||||||| || || || |||||||| ||||||||||    ||| || ||||||||| ||||||||||||||||    
T  18259629 aactgatatgaccttcctcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttctt 18259728  T
Q  210 ctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||  |   |||||||||||| ||||||||||| || ||||||||||||||||| || | || |||||  ||| ||| |||||| || |||||||||    
T  18259729 ctcatctctatcacaaacattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatca 18259828  T
Q  310 tttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagcta 409  Q
    ||||  |  ||||| |||||| |||||||||||||   |||||||||| |||||||||||| |||||| ||||  |||| || ||| ||| ||| || |     
T  18259829 tttaacctctgcttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcccctacgctcactcatcaccttgtaatgagatt 18259928  T
Q  410 tcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
    | || || |||| |||||   || || ||||||| || |||||||||||||| || |||||| | |||||||||||    
T  18259929 ttgtatcttcttcatagatcctgtagctacttactaaatcagagaagtttcttattttctagtaaccaatagccct 18260004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 7357346 - 7357654
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || || ||||| | ||| |||||||| |||||||  |||||| |||||||||| | ||    
T  7357346 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgtgtaccagtcaatgcaaacaccttcccactagttctagccttcttcggctcag 7357445  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| |||||| |||||||||| ||||| || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  7357446 gacactgtgaactaatatgaccctctccattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaa 7357545  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| ||||||| ||   | ||||||| || |||||||||||||| |||| |||  | ||||| || ||||||||||  ||||||| |||||| ||     
T  7357546 gcacttcctctcatctttaccataaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctc 7357645  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  7357646 ctatcatca 7357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 27903464 - 27903720
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||| |||||||||||||||| ||||||||| |  || |||||||| | ||| ||||| ||||| || |  ||||| |||||||| ||||| |    
T  27903464 ttaaagaaacatgtacctctgataagtcgatcctcattggtagtctgcgtaccagtcaaagcaaatacttttcctcaagttctgaccttcttaggttgcg 27903563  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| || | |||||| ||||| |||||||| || || ||||| ||||||||||| ||||| ||||| ||||| ||||||||| | |||||    
T  27903564 tgcactgtgaactaatgttgccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaa 27903663  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
     |||||||||||||| ||||| || |||||||| |||||||||||| | ||||||||    
T  27903664 acacttcttctcatctttggtgcagacattactcttgtggcctttcgcaccacactt 27903720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 11204425 - 11204115
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| |||||||| |||||| |||| ||||| | ||    
T  11204425 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtntgcgtaccagtcaaagcaaacaccttcccaccagttctagcctttttcggctcag 11204326  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| |||||| ||||||| || ||||| || ||||| ||||||||||| | |||||    |||||||||||||||| |||||||    
T  11204325 gacactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaa 11204226  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||| ||  | |||||  |   ||||||||| || |||||||||||||| ||||||||| | ||||| || |||| |||||  ||||||| |||||||||     
T  11204225 gcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctc 11204126  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  11204125 ctatcatcatt 11204115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 3261987 - 3261679
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  3261987 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcag 3261888  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  3261887 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 3261788  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  3261787 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 3261688  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  3261687 ctatcatca 3261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 44659059 - 44658764
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || ||||||||   ||| |||||||| || ||||| ||||||  ||||||||||| ||    
T  44659059 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccattcaaagcaaacacctttccaccagttctagtcttcttcggttcag 44658960  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| |  ||| ||||||| || || || || ||||| ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  44658959 gacactgtgaactaatatgacattctccattgcaattgtaacagacaatatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 44658860  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttggg 296  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| ||||||    
T  44658859 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttggg 44658764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 29450730 - 29450442
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || ||  |||||  ||||||||| | ||    
T  29450730 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcag 29450631  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| |||||||| || || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  29450630 gacactgtgaactgatgtgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 29450531  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctcc 289  Q
     |||||| | |||||      |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  |||||||    
T  29450530 acacttcctatcatctcctccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcc 29450442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 15073438 - 15073819
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||| ||||| | ||| | |||||| || ||||| ||   | ||||||| || |       
T  15073438 ttaaagaaacaagtacctctgataagtcggtcctcattaacagtttgtgtaccagtcaaagaaaacaccttgccacctgtcagagccttcttaggcttcc 15073537  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| || |||||||  || |||||||| || | ||||| | ||||||||||||||||   ||| || ||||  ||| |||| ||    
T  15073538 tgcactgtgagcttatatgaccttcttcatcacaattatagcaaacaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaa 15073637  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||   |  ||| |||||||| ||||||||||| || |||||||| || || || || |||| |||||  ||||||| | | || ||     
T  15073638 acacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctc 15073737  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    ||||||||||| ||||  || ||  | ||| |||||||||||||   ||| |||||||||||| |||||| ||| |||||||    
T  15073738 ctctcatcattcagtctctgtttaactttgtcagcaggagcactatacggtttcggacgactcagctgtcccttacctctac 15073819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 344
Target Start/End: Original strand, 8708978 - 8709099
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgct 322  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||| | | ||| ||||| ||||||||||| | || |||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  323 tgcccttgccagcaggagcact 344  Q
    | || ||| |||||||||||||    
T  8709078 tccctttgtcagcaggagcact 8709099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 18604531 - 18604488
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaa 265  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||    
T  18604531 acaaacattactcttgtggcctttctcgccacagttaaaacaaa 18604488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 5045 - 4666
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||    | ||| ||||||||||| |||||||||||||||||| |||| || |    
T  5045 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtcatagtcaaagcaaacacttttccaccggttctaaccttcctcggctgtg 4946  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||||| ||||||||||||||| || ||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  4945 tacactgagtactgatatggccctcctcgttgcagttataacatacaacatcaccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaa 4846  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| | || ||||| ||||||||||  |||||||  || || ||     
T  4845 gcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacacttataacagactatctcagcaggagcatctctcctatttggcctc 4746  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| |||| |||||| |||||| ||  ||| ||||||  ||| || |||||||||||||||| ||| |||||    
T  4745 ctctcatcattcagtctttgctttcccttgtcaaaaggggcactgtacggtttaggacgactctgctgtcccttacctct 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 17680 - 17301
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| | ||||||||| |  || |||||||| | ||| ||||||| ||||||||| ||||||||||||||||| || |    
T  17680 ttaaagaaacaagtacctctgataagacgatcctcattagtagtctgcgtaccagtcaaagcaaacattttcccaccagttctaaccttcttcggctgtg 17581  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||||| |||||||||||||||||| ||||| || || ||||| | |||||||||| || |||| |||||   ||||||||| ||| || |||| ||    
T  17580 tacactgagtactgatatggccctcttcgttgcaattgtaacatacaacatcaccacgcatgtaatccgctaatgtgtgacccttttgatcacacctaaa 17481  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||||||||||  |||||||  || || ||     
T  17480 gcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataacaaactatctcagcaggagcatctctcctattcggcctc 17381  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| |||| ||| || |||||| ||||||| ||||||  ||| || |||||||||||||||| ||| |||||    
T  17380 ctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttacctct 17301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 741 - 372
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||  | |||||||| |  || |||||||| | ||| ||||||||||||||||||||||||| |||||| || ||||    
T  741 ttaaagaaacaagtacctctgataagcttgtcctcattagtagtctgcgtaccagtcaacgcaaacactttcccaccggttctaatcttctttggctgag 642  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||| |||||||| ||||  || ||||| || || | ||||   | |||||| | ||| ||   ||| || ||||||||| |||||||    
T  641 tgcactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcattcctcttgcagttagccaatgtgtgtcctttctgaccacacctgaa 542  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||| ||||||||||    
T  541 gcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagtaggagcatctctcctcttgggtctt 442  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    ||||||||||| || |||||||| |||||| ||||||| | ||||  |||||| ||||||||||| ||||    
T  441 ctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgactctgttgtc 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 155; Significance: 4e-82; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 1 - 427
Target Start/End: Original strand, 37047 - 37473
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||| || ||||| |  ||||||||||||| ||| | |||||| || ||||| || |||||||||||||| || |    
T  37047 ttaaagaaacaagtacctatgataagtctgtcttcattagttgtttgcgtaccggtcaaagaaaacaccttaccaccagtcctaaccttcttcggctgcg 37146  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||||||||||| || ||||| |||| ||| ||||||||||    ||| |||||||||||| |||||||    
T  37147 tacactgtgaactgatatgaccttcctcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaa 37246  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||   |||||||||||| ||||||||||||||||||||||| |||||||  || |||| |||||||||||||| |||||| ||     
T  37247 gcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctc 37346  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| | ||  ||||| |||||| | ||| |||||||   ||||||||||||||||||||||| ||| |||||||  |||| || ||| |||     
T  37347 ctctcatcattcaatctctgcttacccttgtcggcaagagcactatacggcttcggacgactctgctgtcccttacctctacgttcactcatcaccttgt 37446  T
Q  401 aataagctatcgtgtcgtcttaataga 427  Q
    ||| |||| |||| || |||| |||||    
T  37447 aatgagctttcgtatcttcttcataga 37473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 683 - 304
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || || ||||| | ||| ||||||||||||||| ||||||||||||||||||| || |    
T  683 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgtgtaccagtcaatgcaaacactttcccatcggttctaaccttcttcggctgtg 584  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  583 tgcactgtgaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaa 484  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||||||||||||||||| ||| ||||||||||||  |||||| ||  | ||||| || ||||||||||  |||||||  ||||| ||     
T  483 acacttcttctcatccttggtacaaacatcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctc 384  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| | |   ||||| |||||| ||||||| ||||||  |||||| ||  ||||||| |||| ||| |||||    
T  383 ctctcatcattcaatatctgctttcccttgtcagcaggggcactgtacggcttagggtgactctgttgtcccttacctct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 20922 - 21299
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||  ||||||| | | |||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||| |    
T  20922 ttaaagaaacaagtacctctgataagtagatcctcaatagtggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtg 21021  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||| ||||||| ||||||||||||||||| | ||| || || ||||| |||||| ||||   ||| |||||||| ||| |||||||    
T  21022 tacactgtgaactgatacggccctcctcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgtcccttctgtccacacctgaa 21121  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||| | || |||||||||||||| |||||||||||||| ||||||||  ||||||| || ||||||| ||  ||||||| |||||| ||     
T  21122 gcacttcttctcacctttagtacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcctc 21221  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcct 378  Q
    ||||||||||| || |  || || || ||| ||||||| |||||   ||| || |||||||||| ||||| |||||||    
T  21222 ctctcatcattcagcctctgttttcctttgtcagcaggggcactatacggtttaggacgactctactgtcccttgcct 21299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 152; Significance: 3e-80; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 64798 - 64419
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| |    
T  64798 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtg 64699  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| ||||||||||||||||  || |||||||| |||| ||||||||||||||||| |||||    ||| || ||||||||| |||||||    
T  64698 tgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaa 64599  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| ||||||||||  || ||||  || || ||     
T  64598 acatttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctc 64499  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    || |||||||| ||||  ||||| |||||| |||| || |||||   ||| || |||||||||||||||| ||| |||||    
T  64498 ctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctct 64419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 49376 - 48997
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| |    
T  49376 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtg 49277  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| ||||||||||||||||  || |||||||| |||| ||||||||||||||||| |||||    ||| || ||||||||| |||||||    
T  49276 tgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaa 49177  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||  | |||||||| ||||||||||  || ||||  || || ||     
T  49176 acatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctc 49077  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    || |||||||| ||||  ||||| |||||| |||| || |||||   ||| || |||||||||||||||| ||| |||||    
T  49076 ctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctct 48997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 58410 - 58031
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| |    
T  58410 ttaaagaaacaagtacctctgataagacggtcctcattagtagtctgcgtaccagccaaagcaaacactttcctaccagttctaaccttcttcggttgtg 58311  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| ||||||||||||||||  || |||||||| |||| ||||||||||||||||| |||||    ||| || ||||||||| |||||||    
T  58310 tgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaa 58211  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||  | |||||||| ||||||||||  || ||||  || || ||     
T  58210 acatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctc 58111  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    || |||||||| ||||  ||||| |||||| |||| || |||||   ||| || |||||||||||||||| ||| |||||    
T  58110 ctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctct 58031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 461
Target Start/End: Original strand, 29732 - 30192
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | || |||||||| | ||| |||||||| || ||||| || ||||||||||||||||| |    
T  29732 ttaaagaaacaagtacctctgataagtcggtcctcattaactgtctgcgtaccagtcaaagcaaacaccttaccacctgtcctaaccttcttcggttgcg 29831  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||  |||| || || || || |||| ||| ||||||||||    ||| ||||| |||||| |||||||    
T  29832 tacactgcgaactgatatgaccttcctcattgcaaatataacaaacgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaa 29931  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||||| ||||| |||||||||||||| |||||||| ||||||||||| |||| ||||   ||||||| |||||| ||     
T  29932 gcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcctc 30031  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    |||||||||||||  |  ||||| |||||| |||||||||||||   ||||||||||||||||||||||| |||||||||||  |||| || ||| |||     
T  30032 ctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgt 30131  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttct 461  Q
    ||| |||| ||||||| || | ||| |   | ||| | |||||||| ||||||||||||||    
T  30132 aatgagctttcgtgtcctcctcataaatcctacagctgcttaccaaatcagagaagtttct 30192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 98779 - 98400
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||  |||||| | | |||||| ||||| | ||  |||||||| || ||||| || |||||||||||||| || |    
T  98779 ttaaagaaacaagtacctttgataagtcggtcctcactagtggtttgtgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggctgtg 98680  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  98679 tgcactgcgaactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 98580  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| || |||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||||  ||||||| |||||| ||     
T  98579 acacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctccacttgggcctc 98480  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    |||||||||||||  |  ||||| |||||| ||||| |||||||    ||||||||||||||||| |||| ||| |||||    
T  98479 ctctcatcatttaacctctgcttacccttgtcagcatgagcactatatggcttcggacgactctgttgtcccttacctct 98400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 382
Target Start/End: Original strand, 176195 - 176476
Alignment:
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| || |||||||  || |||||||| || | ||||||||||||||||||||||||   ||| || ||||  ||| |||| ||    
T  176195 tgcactgcgagctaatatgaccttcttcatcacaattatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaa 176294  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||   |  ||| |||||||| ||||||||||| || |||||||| || || || || || | |||||  ||||||| | | || ||     
T  176295 acacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctc 176394  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    ||||||||||| ||||  || ||  | |||   |||||||||||   ||| ||||||||||||||||||| ||| |||||||    
T  176395 ctctcatcattcagtctctgtttaactttgttggcaggagcactatacggtttcggacgactctgctgtcccttacctctac 176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 54155 - 54623
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| |  || ||||||||||| |||| ||| |||||||| |||||||| |    
T  54155 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtgaaagcaaacactttaccactggtcctaacctttttcggttgtg 54254  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||| | || |||||||| |||||||||||||||||||| || || | ||||||||||||||||| |||||    ||| |||||||||||| |||||||    
T  54255 tgcaccgtgagctgatatgaccctcttcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaa 54354  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| || |||||||||||||| |||||||||||||||||||||||  | ||||| || |||||| |||  | ||  |  ||||| ||     
T  54355 acacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctc 54454  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |  |  ||||| || ||| |||||||||||||   |||||| ||||||||||| ||||  ||||  || |  |||| || ||| ||      
T  54455 ctctcatcattcaacctctgcttccctttgtcagcaggagcactatacggctttggacgactctgatgtcctttgctccttcgatcactcatcaccttat 54554  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| || |||| || | ||||| | ||||| |||||||||||||||||||||||||||||||||    
T  54555 aatgagctttcatgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttct 54623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 164597 - 164287
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||| | |  || | |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  164597 ttaaagaaacaagtacctctgataagtcggtcctcactagtagtctacgtaccggtcaatgcaaacactttcccaccggttctaaccttcttcggctgag 164498  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |  | || |||||||||||||| ||||||||||||||||| || || | || |||||||||||||||| ||||   ||| || ||||||||| |||||||    
T  164497 tataatgcgaactgatatggccttcttcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaa 164398  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||  | ||||| || |||||||||| ||||||||  ||||| ||     
T  164397 acacttcttctcatccttagaacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctc 164298  T
Q  301 ctctcatcatt 311  Q
    |||||||||||    
T  164297 ctctcatcatt 164287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 7146 - 7614
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | ||||||||| || |  |  ||||||||||| |||||||| |||| |||||| || |       
T  7146 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtgccagttagagcaaacactttaccaccggtcctaatcttcttgggcttct 7245  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| || || || ||||| ||||||||||   ||||||| || || | |||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  7246 tgcattgcgagctaatatgcccctcttcatcatagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 7345  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||||  |||||||  ||||| ||     
T  7346 gcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctc 7445  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |  |  ||||| |||||| || ||||||||||   |||||||||||||||||||||||  ||||  || |  |||| || ||| |||     
T  7446 ctctcatcattcaacctctgcttacccttgtcaacaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgt 7545  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||| ||||||| || | ||||| | ||||| |||||||||||||||||||||| ||||||||||    
T  7546 aatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcctgatcttct 7614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 469
Target Start/End: Original strand, 1 - 33
Alignment:
Q  437 tacttaccaattcagagaagtttctgatcttct 469  Q
    |||||||||||||||||||||| ||||||||||    
T  1 tacttaccaattcagagaagttcctgatcttct 33  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 22230 - 22574
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || || ||||| | ||| ||||||||| | ||| ||||||||||||||||||| || |    
T  22230 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgagtaccagtcaatgcaaacactataccaacggttctaaccttcttcggctgtg 22329  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| |||    ||| || ||||||||| || ||||    
T  22330 tgcactgagaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaa 22429  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||  | ||||| || ||| ||||||  |||||||  ||||| ||     
T  22430 gcatttcttctcatccttagtaaaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctc 22529  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    ||||||||||| |||| ||| || || ||| | ||||| ||||||    
T  22530 ctctcatcattcagtctttgatttcctttgtcggcaggggcactg 22574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 1e-73; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 20833165 - 20832754
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| | |||||| ||||||||| ||||||| |    
T  20833165 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttactaccggtcctaaccttcctcggttgcg 20833066  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| |||||||| || || || |||||||||||||| || || | ||| || | ||||||||||||||    ||| || ||||||||| |||||||    
T  20833065 tacactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaa 20832966  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||||||||||| || |||||||||||||| |||||||||||||||||||||||  ||||||| || ||| ||||||  ||||||| |||||||||     
T  20832965 acaattcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagcatctctcctcttgggtctc 20832866  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  ||||| |||||| ||||||||||||| |   | || |||||||||||||||| ||||||||||| ||||| || ||| |||     
T  20832865 ctctcatcattcagcctctgctttcccttgtcagcaggagcact-atatgtttaggacgactctgctgtcccttgcctctacggtcactcatcaccttgt 20832767  T
Q  401 aataagctatcgt 413  Q
    ||| |||| ||||    
T  20832766 aatgagctttcgt 20832754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 21961152 - 21961531
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| ||||| || || ||||| ||||||||||||||||| | ||    
T  21961152 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaaagcaaatacctttccaccagttctaaccttcttcggctcag 21961251  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
     |||||| ||||||||||| |||||| |||||||||| ||||| || ||||| |||||||| || ||||||||   ||| |||||||||||| |||||||    
T  21961252 ggcactgcgaactgatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaa 21961351  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| ||||||| ||   ||||||||| || ||||||||||| || ||||||||  | ||||| || |||| |||||  ||||||| |||||||||     
T  21961352 gcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttgggtctc 21961451  T
Q  301 ctctcatcatttagtcgt-tgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    || |||||||| | || | ||||| || ||| ||| ||||||||||   ||||| |||||| ||||||||| ||| |||||    
T  21961452 ctatcatcattca-tcttctgctttcctttgtcagaaggagcactgtaaggcttaggacgattctgctgtcccttacctct 21961531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 461
Target Start/End: Complemental strand, 22016010 - 22015550
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| || |||||||||||||| || |    
T  22016010 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttcggctgcg 22015911  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | |||||  |||| |||||  | || || ||||||||||| || || | ||| ||||||||||||||||||||   ||| || ||||||||| |||||||    
T  22015910 tacactgcaaactaatatgatcttcctcgttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaa 22015811  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||||||||||||||| |||||||| || |||||||| || ||||| || |  | |||||  ||||||  ||| || ||     
T  22015810 gcacttcttctcatctctatcacaaacattacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctc 22015711  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||||| ||  | ||| |||||| |||||||||||||   ||||||||||||||||||||||| ||| || ||||  |||| || ||| |||     
T  22015710 ctctcatcatttattctcttcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtccctttcccctacgctcactcatcaccttgt 22015611  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttct 461  Q
    ||| |||| ||||  | |||| |||||   | ||| | |||||||| ||||||||||||||    
T  22015610 aatgagctttcgtaacttcttcatagatcctacagctgcttaccaaatcagagaagtttct 22015550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 21742817 - 21742349
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| ||||| || || ||||| || ||||||||||| || || |    
T  21742817 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccagtcaacgcaaataccttgccacctgtcctaaccttcttaggctgcg 21742718  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || ||||| ||||| ||||| || | ||| ||||||||||||||||| ||   ||| || ||||||||| |||| ||    
T  21742717 tacactgcgaactaatatgtccttcctcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaa 21742618  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || ||| ||| |||||||| |||||||||||||| |||||||| |||||||  || |||| |||||  ||||||| ||| || ||    
T  21742617 gcacttcttctcat-ctcggtcacatacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcct 21742519  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     ||||||||||| ||||  ||||| |||||| ||| |||||||||   ||| ||||||||||||| ||||| ||| ||||| |  |||| || ||| |||    
T  21742518 cctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcggacgactctactgtcccttacctctgcgctcactcatcaccttg 21742419  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
     ||| |||| |||| || |||| ||| |   ||||| |||| ||||| ||||||||  |||| |||||||    
T  21742418 taatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaaattcttatcttct 21742349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 24096880 - 24096570
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||||||||||||||||||| |||||||||| ||||    
T  24096880 ttaaagaaacaagtacctctgataagtcagtcctcattagtagtctgcgtaccagtcaatgcaaacactttcccaccggttctagccttcttcggctgag 24096781  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||| |||| ||    
T  24096780 tacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaa 24096681  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||| |||||||  |   |||| ||||||| ||||||||||| || |||||||| || ||||| || ||| ||||||  ||||||| |||||| ||     
T  24096680 acacttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctc 24096581  T
Q  301 ctctcatcatt 311  Q
    |||||||||||    
T  24096580 ctctcatcatt 24096570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 20074974 - 20074718
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||  || || || ||||||||||||||||| | ||    
T  20074974 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacatcttgcccccagttctaaccttcttcggctcag 20074875  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||| ||||||| |||||| |||||||||| ||||| || ||||| ||||||||||| ||||| ||   |||||||||||||||| |||||||    
T  20074874 gacactgcgaattgatatgaccctctccattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaa 20074775  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| ||||||| ||  |||||||||| || |||||||||||||| ||||||||    
T  20074774 gcacttcctctcatctttactacaaacattgctcttgtggcctttctcaccacactt 20074718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 52988866 - 52989176
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || || ||||||||||||||||||| ||    
T  52988866 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcag 52988965  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      || || ||||||||||| |||||| |||||||||| ||||| || || || |||||||| || ||||||||   |||||||||||||||| |||||||    
T  52988966 gacattgtgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaa 52989065  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||| ||||||| ||   ||||||||| || ||||||||||| || ||||||||  | ||||| || |||| |||||  ||||||| ||| || ||     
T  52989066 acacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctc 52989165  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  52989166 ctatcatcatt 52989176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 19857399 - 19857867
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| ||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||| |||  ||||||||||||||||||    
T  19857399 ttaaagaaacaagtacctctaataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccactggtcataaccttcttcggttgag 19857498  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || |||||| ||||||| || || || || || ||||| ||||||||||    ||| || ||||||||| |||||||    
T  19857499 tacactgcgaactaatatgaccttcctcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcctttctgaccacacctgaa 19857598  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||| |||||||||||  |   ||| |||||||| ||||||||||| || |||||||| |||||||| || || | || ||  ||||||| ||| || ||     
T  19857599 gcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagcatctctcctcttaggcctc 19857698  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| |  |  ||||| |||||| |||||||||||||    || || ||||||||||| |||| ||| ||||| |  |||| || ||| |||     
T  19857699 ctctcatcattcaacctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcactcatcaccttgt 19857798  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
    ||| |||  | || || |||| |||||  || ||| | |||||||| ||||| |||||||| |||||||    
T  19857799 aatgagccttagtatcctcttcatagatcttacagctgcttaccaactcagaaaagtttctaatcttct 19857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 37680174 - 37680482
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||| |||||||| |  || |||||||| | ||| |||||||| ||||||||  |||||  |||| |||| | ||    
T  37680174 ttaaagaaacaagtacctctgataagtctgtcctcattaggagtctgcgtaccagtcaaagcaaacaccttcccaccaattctagtcttcctcggctcag 37680273  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| || ||| ||||||| || || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  37680274 gacactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 37680373  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||| ||||||| |||||| ||     
T  37680374 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctc 37680473  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  37680474 ctatcatca 37680482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 21739301 - 21738850
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| | |||||  || ||||| || ||||||||||| || |  |    
T  21739301 ttaaagaaacaagtacctctgataagtcggtcctcattaaccgtttgcgtaccagtcaaagaaaacagcttgccacctgtcctaaccttcttaggctccg 21739202  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || ||||||||  |||| ||||| |  | ||| |||||||| |||||| ||||   ||| || ||||||||| |||| ||    
T  21739201 tacactgcgaactgatatgaccttcttcattatagttgtagcaaaaaacatccccacgcttacaatcaactaaggtgtgtcctttctgaccacacctaaa 21739102  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || | | |||||||||||| |||||||||||||| |||||||| |||||||  || |||| |||||   |||||| ||| || ||    
T  21739101 gcacttcttctcat-ctcgatcacaaacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcacctctcctcttaggcct 21739003  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     ||||||||||| | ||  ||||| |||||| ||||| | || ||    ||||||||||||||||| |||| ||| ||||| | ||||| || ||| |||    
T  21739002 cctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggcttcggacgactctgttgtcccttacctctgcggtcactcatcaccttg 21738903  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcaga 452  Q
     ||| |||| |||| || |||| ||| |   ||||| ||||||||||||||||    
T  21738902 taatgagctttcgtatcctcttcatatatcctgcagctacttaccaattcaga 21738850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 38910091 - 38909783
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||||||||| || || |||||  |||||  ||||||||| | ||    
T  38910091 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaggcaaaaacctttccaccaattctagtcttcttcggctcag 38909992  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  38909991 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 38909892  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  38909891 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 38909792  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  38909791 ctatcatca 38909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 48425998 - 48426306
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || |||||  |||||  ||||||||| | ||    
T  48425998 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcggctcag 48426097  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  48426098 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 48426197  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  48426198 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 48426297  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  48426298 ctatcatca 48426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 31537262 - 31536893
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  || ||||| |  || |||||||| | ||  |||||||| || |||||  |||||  ||||||||| | ||    
T  31537262 ttaaagaaacaagtacctctgataagtcggtcttcattaggagtctgcgtaccagtcagagcaaacacctttccaccaattctagtcttcttcggctcag 31537163  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| |||||||| ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  31537162 gacactgtgaactaatatggccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 31537063  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||| ||  | |||||  |   ||||||||| || |||||||||||||| ||||||||| | ||||| || |||| |||||  ||||||| |||||||||     
T  31537062 gcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctc 31536963  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    || |||||||| |  |  ||||| || ||| |||||||||||||    ||||| |||||| |||||||||    
T  31536962 ctatcatcattcatcctctgctttcctttgtcagcaggagcactataaggcttaggacgattctgctgtc 31536893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 309
Target Start/End: Original strand, 20297569 - 20297816
Alignment:
Q  62 caaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgctt 161  Q
    ||||||| |||||||| ||||||||||||||||  | ||  ||||  ||||| ||||| || ||| |||||||||| ||||| || || || ||||||||    
T  20297569 caaacaccttcccaccagttctaaccttcttcgactcaggacactatgaactaatatgaccttctccattgcagttgtagcagacaatgtccccacgctt 20297668  T
Q  162 gcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaag 261  Q
    ||| |||||||    ||||||||||| |||| |||||||||||||| ||||||| ||   |||||||||||| ||||||| |||||| ||||||||  |     
T  20297669 gcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcatttctcaccacacttgtaa 20297768  T
Q  262 caaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||| || ||||||||||  ||||||| |||||| || || ||||||    
T  20297769 caaacaatctcagcaggagcatctctcctcttgggcctcctgtcatca 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20854025 - 20853784
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| |||||| || |  || || ||||| | ||| || || || ||||| |  ||||| |||||||| ||||| |    
T  20854025 ttaaagaaacaagtacctctgataagtcgatcctcgttggtagtctgggtaccagtcaaagcgaaaaccttccctcaagttctgaccttcttaggttgcg 20853926  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || || |||||||| ||    || ||| | || || ||||| ||||||||||| ||||| ||||  ||||||||||||||  | |||||    
T  20853925 tgcactgcgagctaatgtggccctcatcgccacaattaaaacaaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaa 20853826  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| | ||| ||| ||||||| ||||||||    
T  20853825 acatttcttctcatcttgggtgcaagcattactcttgtggcc 20853784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18710510 - 18710586
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccacc 77  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||||    
T  18710510 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccacc 18710586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 21045125 - 21045042
Alignment:
Q  295 ggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcct 378  Q
    ||||| ||||||||||| | || ||||||||||||  ||||||||||||||   ||||| |||||||| ||||| | |||||||    
T  21045125 ggtctcctctcatcattaactctttgcttgcccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcct 21045042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 16379407 - 16379441
Alignment:
Q  220 gtacaaacattacttttgtggcctttctcgccaca 254  Q
    ||||||||||||||||||||||||||||| |||||    
T  16379407 gtacaaacattacttttgtggcctttctcaccaca 16379441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 18273114 - 18273252
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgct 322  Q
    ||||||||||| |||||||| ||||| ||||||||  | ||||| || |||| ||||   ||||| | ||| ||||| ||||||||||| | || |||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T
Q  323 tgcccttgccagcaggagcactgagcggcttcggacgac 361  Q
      || ||| || |||||||||||   |||||||||||||    
T  18273214 cccctttgtcaacaggagcactgtagggcttcggacgac 18273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 21228600 - 21228542
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
    |||||||||||| |||||||||||||||||||| || || ||||| || || |||||||    
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggag 21228542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 5405 - 5062
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||  |    
T  5405 ttaaagaaacaagtacctctgataagtcgatcctcagtagtggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttatg 5306  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||||||||| ||||||||||||||||| || | ||| |  ||||| |||||||||||   ||| |||||||||||| |||||||    
T  5305 tacactatgaactgatatggccctcctcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaa 5206  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||   ||| |||||||| ||||||||||| |||||||||||  ||||||| || ||||||||||  ||||||| | | || |      
T  5205 gcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagcatctctcctcctaggccac 5106  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||| ||| || | |||||| |||||| |||||||||||||    
T  5105 ctctcattattcagcctttgctttcccttgtcagcaggagcact 5062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 1050 - 771
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||| || ||||||| | | ||||||| |||| | ||| ||||||||||| |||||||||||||||||| ||||||| |    
T  1050 ttaaagaaacaagtacctctgataattcgatcctcactagtggtttgcataccagtcaaagcaaacactttaccaccggttctaaccttcctcggttgcg 951  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| |||||||||||||||||||| || || |||||||||||||||||||||||||    ||| || ||||||||| |||||||    
T  950 tacactgtgaactgatatgaccctcttcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaa 851  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
    ||||||||||||||| || |||||||||||||| || |||||||||| |||||||||  | ||||| || ||||||||||    
T  850 gcacttcttctcatctttagtacaaacattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggag 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 469
Target Start/End: Complemental strand, 3916 - 3779
Alignment:
Q  332 cagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgtgtcgtcttaatagaattt 431  Q
    |||||||||||||   |||||||||||||||||||||||  ||||  || |  |||| || ||| ||| ||| |||| ||||||| || | ||||| | |    
T  3916 cagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcatagattct 3817  T
Q  432 gcagatacttaccaattcagagaagtttctgatcttct 469  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  3816 gcagctacttaccaattcagagaagttcctgatcttct 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 136; Significance: 1e-70; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 39529 - 39186
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||||||| ||||||||||||| ||| |    
T  39529 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcgattgtg 39430  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||| | || || ||||||||||||||||| || | ||| || ||||| |||| ||||||   ||| || ||||||||| |||||||    
T  39429 tacactgcgaactgatacgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaa 39330  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||||||||||  ||||||| |||||| ||     
T  39329 gcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctc 39230  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||| || |  ||||| |||||| |||||||||||||    
T  39229 ctctcatcattcagcctctgctttcccttgtcagcaggagcact 39186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 242
Target Start/End: Complemental strand, 180951 - 180794
Alignment:
Q  85 accttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgaccct 184  Q
    |||||||| |||||||||||||| ||||| || || ||||| |||   |||||| | || || ||||| ||||||||||||||||| ||||| |||||||    
T  180951 accttcttaggttgagtgcactgcgaactaatgtgaccctcatcaccacagttaaaacaaacaatatctccacgcttgcaatcagccaacacatgaccct 180852  T
Q  185 tctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
    |||||||  | ||||| || ||||||||||| |  || ||| ||||||| ||||||||    
T  180851 tctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcc 180794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 14753 - 14811
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
    |||||||||||| |||||||| |||||||||||||| || ||||| || || |||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggag 14811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 134; Significance: 1e-69; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 325815 - 326155
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |    
T  325815 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcaaagcaaacactttaccaccggttctaaccttctttggttgtg 325914  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||||||||||||||||||||||||||| || || | ||| || ||||| |||| ||||||   ||| || ||||||||| || ||||    
T  325915 tgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaa 326014  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||   ||| |||||||| |||||| ||||||||||||||||  ||||||| || ||||||||||  |||||||  || || ||     
T  326015 gcacttcttctcatctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcatctctcctatt-ggcctc 326113  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagca 342  Q
    ||||||||||| || |  ||||| ||||||  ||||||||||    
T  326114 ctctcatcattcagcctctgcttacccttgttagcaggagca 326155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 184 - 458
Target Start/End: Original strand, 319534 - 319808
Alignment:
Q  184 ttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgt 283  Q
    ||||||||| |||||||||||||||||||||| ||   ||| |||||||| |||||||||||||||||||||||  ||||||| ||  |||||||||  |    
T  319534 ttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcat 319633  T
Q  284 ctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctaca 383  Q
    ||||||  ||||| || ||||||||||| || |  |||||  ||||| |||||||||||||   |||||||||||||||||||||||  ||||| || |     
T  319634 ctctcctattgggcctcctctcatcattcagcctctgcttatccttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgccccttcg 319733  T
Q  384 gtcacgcagcacattgaaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtt 458  Q
     ||||  | ||| ||| ||| |||| ||||||| || | ||| | | ||||| ||||||||||||||||||||||    
T  319734 atcacttatcaccttgtaatgagctttcgtgtcctcctcataaattctgcagctacttaccaattcagagaagtt 319808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 200664 - 200627
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatt 38  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  200664 ttaaagaaacaagtacctctgataagtcggtcctcatt 200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 53619 - 53275
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||   |||||||| |  || |||||||| | ||| ||||| ||||||||||||||||||||||||||||| |  |    
T  53619 ttaaagaaacaagtacctctgataagttggtcctcattagtagtctgcgtaccagtcaatgcaaatactttcccaccggttctaaccttcttcggctatg 53520  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| || ||||||||||||||||||||||| |||||||| ||||| |  |||||||||||||||||| |||  | ||| || || |||||| |||||||    
T  53519 tgcattgtgaactgatatggccctcttcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaa 53420  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || |||||||||||||| |||||||||||||| |||||||||||||||||||||||  | ||||| ||  ||||| |||  |||||||  ||||| ||     
T  53419 tcatttcttctcatccttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctc 53320  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    ||||||||||| | ||  ||||| |||||| ||||||| ||||||    
T  53319 ctctcatcattcaatctctgctttcccttgtcagcaggggcactg 53275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 470
Target Start/End: Original strand, 34445 - 34914
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| |||||||  ||||||||  | ||||||||||| | |||||||||||| || ||||| || |||||||||||||| || |    
T  34445 ttaaagaaacaagtacctctaataagtcggtcctcattaactgtttgcgtaccagtcaaggcaaacacctttccacctgtcctaaccttcttcggctgcg 34544  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||| ||||| || || |||||||||||||| || || |  || |||||||| |||||| ||||   ||| || |||| |||| |||||||    
T  34545 tacactacgaactaatatgaccttcctcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaa 34644  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||| |||||||| |||||||||||||| |||||||| || ||||| || |||| |||||  ||||||| |||||| ||     
T  34645 gcacttcttctcatctctatcacagacattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctc 34744  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    |||||||||||||  | |||||| |||||| |||||||||||||   | ||||||||||||||||||||| ||||||||| |  |||| || ||| |||     
T  34745 ctctcatcatttaacctttgcttacccttgtcagcaggagcactatacagcttcggacgactctgctgtcccttgcctctgcgttcactcatcaccttgt 34844  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttcta 470  Q
    ||| |||| | ||||| || | ||| |   ||||| |||||||||| |||||||||||||| || |||||    
T  34845 aatgagcttttgtgtcctcctcataaatcctgcagctacttaccaaatcagagaagtttcttattttcta 34914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 100 - 469
Target Start/End: Original strand, 15279 - 15648
Alignment:
Q  100 gtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctga 199  Q
    |||||||| |||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||    ||| |  ||||||||| ||||||    
T  15279 gtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctga 15378  T
Q  200 agcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||| |  || ||||||||||  |||||||  ||||| ||    
T  15379 agcacttcttctcgtccttagtacaaacattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcct 15478  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     |||||||||||||  |  ||||| | |||| |||||||||||||   |||||||||||||||||| ||||  ||||   | |  |||| || ||| |||    
T  15479 cctctcatcatttaacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtcctttgctcattcgatcactcatcaccttg 15578  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
     ||| |||| |||| || || | ||||| | ||||| ||||||||||||||||||| |||||||||||||    
T  15579 taatgagctttcgtttcctcctcatagattctgcagctacttaccaattcagagaaatttctgatcttct 15648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 15233 - 15280
Alignment:
Q  3 aaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgt 50  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  15233 aaagaaacaagtacctctgataagtcgatcctcattagtggtttgcgt 15280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 1011 - 631
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||| |||||||| |  ||||||||||||| ||| |||||||| || ||||| || ||||||||||| || || |    
T  1011 ttaaagaaacaagtacctttgataagtctgtcctcattagttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttctttggctgcg 912  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || || ||||||||||| || || || || |||||||| ||||||||||    ||| |||||||||||| |||||||    
T  911 tacactgcgaactgatatgtccttcctcgttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaa 812  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||||||||||| ||||||||||| || |||||||| |||||| | || || | |||||  ||||||| |||||| ||     
T  811 gcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctc 712  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctcta 381  Q
    |||||||||||||  |  ||||| |||||| | |||||||||||   ||||||||||||||| ||||||| ||||||||||    
T  711 ctctcatcatttaacctctgcttccccttgtcggcaggagcactatacggcttcggacgactttgctgtcccttgcctcta 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 126; Significance: 9e-65; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 50213 - 50697
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||| |||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| || ||||||||||| || || |    
T  50213 ttaaagaaacaagtacctctaataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctggg 50312  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| || || ||||||||||| ||||| || ||||| |||||||| |||||||||||   ||| || ||||||||| |||||||    
T  50313 tacactacgaactgatatgaccttcctcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaa 50412  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
     |||||||||||||| | ||| |||||||||||| |||||| |||| || |||||||| || ||||| || |||| |||||  ||||||| |||||| ||    
T  50413 acacttcttctcatc-tcggtcacaaacattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcct 50511  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     |||||||||||   ||  ||||| |||||| ||||||| |||||   ||||||||||| ||||||||||| |||||||||||  |||| || ||| |||    
T  50512 cctctcatcattccatctatgcttacccttgtcagcaggggcactatacggcttcggaccactctgctgtcccttgcctctacgctcactcatcaccttg 50611  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
     ||| |||| |||| || |||| |||||   | ||| | |||||||| ||||| |||||||| |||||||   | |||||||||||    
T  50612 taatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagtttcttatcttctgataaccaatagccct 50697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 311
Target Start/End: Original strand, 2754 - 3049
Alignment:
Q  16 cctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactga 115  Q
    ||||||||||||| ||||||| | | |||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||| |  ||||| |||||||    
T  2754 cctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggttctaaccttcttcggttgtgcacactgtgaactga 2853  T
Q  116 tatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatc 215  Q
    |||||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||   ||| |||||||| ||| |||||||| |||||||||||||    
T  2854 tatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatc 2953  T
Q  216 cttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
     ||   |||||||||||| |||||||||||||  ||||||||  ||||||| || ||| ||||||  ||||||| |||||| || |||||||||||    
T  2954 tttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcatt 3049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 1079 - 700
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||| |||||||| |  ||||||||||||| ||| |||||||| || ||||| || ||||||||||||||||| |    
T  1079 ttaaagaaacaagtacctctgataagtctgtcctcattagttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgcg 980  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||||||||  | || || || |||||||| ||||||||||    ||  || ||||||||| |||||||    
T  979 tacactgcgaactgatatgaccttcctcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaa 880  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||||| ||||| ||||||||||| || |||||||| |||||||| || || | |||||  ||||||| |||||| ||     
T  879 gcacttcttctcatctctatcacaaacgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctc 780  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    |||||||||||||  |  | ||| |||||| ||||||||||| |   |||||||||||||||||| |||| ||| |||||    
T  779 ctctcatcatttaacctcttcttacccttgtcagcaggagcattatacggcttcggacgactctgttgtcccttacctct 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 9e-62; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 17266709 - 17266345
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||| || |  |||||||| || || |  ||||| | ||| ||||| ||||| |||||   ||||||||||||||| || |    
T  17266709 ttaaagaaacaagtacctttgatgagacggtcctcattagcagtctaggtaccagtcaaagcaaaaacttttccaccaactctaaccttcttcggctgtg 17266610  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||||| |||||| || ||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||| |||||||    
T  17266609 tgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaa 17266510  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||||||| || ||||| ||||||||||  || |||    | || ||     
T  17266509 gcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacacttaaaacacactatctcagcaggagcatccctcttactcggcctc 17266410  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctg 365  Q
    ||||||||||| ||||  ||||| |||||| ||||||| |||||   ||| || |||||||||||    
T  17266409 ctctcatcattaagtctctgcttacccttgtcagcaggggcactatacggtttaggacgactctg 17266345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 23563543 - 23563162
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  ||||||||||||| ||| |||||||| || ||||| || |||||||||||||| || |    
T  23563543 ttaaagaaacaagtacctctgataagtcggtcctcattagttgtttgcgtaccggtcaaagcaaacaccttaccaccagtcctaaccttcttcggctgcg 23563444  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || |||||||||||||| || ||  | || |||| ||| || |||||||    ||| || ||||||||| |||||||    
T  23563443 tacactgcgaactaatatgaccttcctcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaa 23563344  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||| |||||||| ||||||||||| || |||||||| |||||||| || |||| |||||  ||||||| |||||| ||     
T  23563343 gcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcctc 23563244  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    ||||||| |||||  |  |||||  ||||  |||||||||||||   ||||||||||| ||||| ||||| ||| |||||||    
T  23563243 ctctcattatttaacctctgcttatccttttcagcaggagcactatacggcttcggacaactcttctgtcccttacctctac 23563162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 25851065 - 25851373
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| | ||| ||||| || |||||||| |||||| |||||||||| | ||    
T  25851065 ttaaagaaacaagtacctctgataagacggtcctcattggtagtctgcgtaccagtcaaagcaaataccttcccaccagttctagccttcttcggctcag 25851164  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| |||||| |||||||||| ||||| || || || ||||||||| | |||||||    |||||||||||||||| |||||||    
T  25851165 gacactgtgaactaatatgaccctctccattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaa 25851264  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | ||||| ||   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| || |||  ||||||| |||||| ||     
T  25851265 gcacttcctatcatctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctc 25851364  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  25851365 ctatcatca 25851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 23078280 - 23077911
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||  | ||| |||||||||||||||||||| ||| |||||||||| ||||    
T  23078280 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcgtactagtcaatgcaaacactttcccaccggtcctagccttcttcggctgag 23078181  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| || ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||| |||||||    
T  23078180 tacactatgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaa 23078081  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| |||||||  |   |||| |||| |||||||||||||| || |||||||| || || || || ||||||||||  ||||||| |||||| ||     
T  23078080 acatttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctc 23077981  T
Q  301 ctctcatcatttagtcgt-tgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    || |||||||| | || | ||||| || ||| ||||||||||||||   || || ||||||||||||||||    
T  23077980 ctatcatcattca-tcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactctgctgtc 23077911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 22505672 - 22506041
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||  |||||||| |  || |||||||| | ||| |||||||| || || || ||||||||||||||||||| ||    
T  22505672 ttaaagaaacaagtacctttgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcag 22505771  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| |||||||| || |||||| |||||||||| ||||| || || || |||||||| || ||||||||    || ||| |||||||| |||||||    
T  22505772 gacactgtgaactgatgtgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaa 22505871  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| |||| || ||   ||||||||| || |||||||||||||| ||||||||  | ||||| || |||| |||||  ||||||| ||| || ||     
T  22505872 gcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctc 22505971  T
Q  301 ctctcatcatttagtcgt-tgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtc 370  Q
    || |||||||| | || | ||||| || ||| ||||||||||||||   ||||| |||||| |||||||||    
T  22505972 ctatcatcattca-tcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtc 22506041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 20345275 - 20345583
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| |  || ||||| || |||||||| |||||| |||||||||| | ||    
T  20345275 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagttaaagcaaataccttcccaccagttctagccttcttcggctcag 20345374  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| || ||  |||||||||| ||||| || || || ||||||||||| ||| |||    |||||||||||||||| |||||||    
T  20345375 gacactgtgaactaatatgaccttccccattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaa 20345474  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | ||||| ||   |||||||||||| |||||| ||||||| ||||||||  | ||||| || ||||||||||  ||||||| |||||| ||     
T  20345475 gcacttcctatcatctttaccacaaacattactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctc 20345574  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  20345575 ctatcatca 20345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 14884366 - 14884058
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||||||||||||  |||||  |||| |||| | ||    
T  14884366 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacactttcccaccaattctagtcttcctcggctcag 14884267  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| || ||  |||||||||| || || || || || ||||||||||| ||||| ||   |||||||||||||||| |||||||    
T  14884266 gacactgtgaactaatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagccaaactgtgacccttctgaccacacctgaa 14884167  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   ||| |||||||| |||||||||||||| ||||||||  | ||||| || ||||| ||||  ||||||| |||||| ||     
T  14884166 gcacttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcctc 14884067  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  14884066 ctatcatca 14884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 467
Target Start/End: Complemental strand, 21870432 - 21870187
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgc 321  Q
    |||||||||||| |||||| ||||||| |||||||| ||||||| ||| |||| |||||  ||||||| ||| || || ||| ||||||| | |   |||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21870333  T
Q  322 ttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgtgtcgtctt 421  Q
    || |||||| ||||||| |||||   ||||||||||||||||||||||| |||||||||||  |||| || ||| ||| ||| |||| | || || ||||    
T  21870332 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctctt 21870233  T
Q  422 aatagaatttgcagatacttaccaattcagagaagtttctgatctt 467  Q
     ||| |   ||||| |||||||||||||||| ||||| || |||||    
T  21870232 catatatcctgcagctacttaccaattcagaaaagttccttatctt 21870187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 467
Target Start/End: Complemental strand, 21874712 - 21874467
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgc 321  Q
    |||||||||||| |||||| ||||||| |||||||| ||||||| ||| |||| |||||  ||||||| ||| || || ||| ||||||| | |   |||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21874613  T
Q  322 ttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgtgtcgtctt 421  Q
    || |||||| ||||||| |||||   ||||||||||||||||||||||| |||||||||||  |||| || ||| ||| ||| |||| | || || ||||    
T  21874612 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctctt 21874513  T
Q  422 aatagaatttgcagatacttaccaattcagagaagtttctgatctt 467  Q
     ||| |   ||||| |||||||||||||||| ||||| || |||||    
T  21874512 catatatcctgcagctacttaccaattcagaaaagttccttatctt 21874467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20824446 - 20824687
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || |||||||| | ||| ||||| ||||| || || || || |||||||| ||||| |    
T  20824446 ttaaagaaacaagtacctctgataagtcgatcctcattggtagtctgcgtaccagtcaaagcaaatacttttcctccagtcctgaccttcttaggttgcg 20824545  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| || || || || |||   |||||| | || || ||||| ||||||||||| ||  | ||||| ||||| ||||||||  | |||||    
T  20824546 tgcactgcgaactaatgtgaccttcatcaccacagttaaaacaaacaatatctccacgcttgcagtccaccaacacatgacctttctgaccgcatctgaa 20824645  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| |  || ||| ||||||| ||||||||    
T  20824646 acatttcttctcatcttgagtgcaagcattactcttgtggcc 20824687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28892317 - 28892076
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || || ||||| | ||| || || ||||| || |||||||| |||||||| |||||||    
T  28892317 ttaaagaaacaagtacctctgataagtcgatcctcattagtagtctgagtaccagtcaaagcgaatacttttcctccggttctgaccttcttaggttgag 28892218  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | ||  || || |||||||||   ||  || | || || || || || |||||||| ||||| ||||| ||||| ||||||||  | |||||    
T  28892217 tgcactgcgcaccaatgtgaccctcttcaccacaactaaaacaaacgatgtctccccgcttgcattcagccaacacatgacctttctgaccgcatctgaa 28892118  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| |  || ||| ||||||| ||||||||    
T  28892117 acatttcttctcatcttgagtgcaagcattactcttgtggcc 28892076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20778906 - 20779147
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || ||  |||| | ||| || || || || || |||||||| |||||||| |||||||    
T  20778906 ttaaagaaacaagtacctctgataagtcgatcctcattagtagtctgattaccagtcaaagcgaatacctttcctccggttctgaccttcttaggttgag 20779005  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| | ||   | |||||||| |||   ||  || | || ||  | || ||||||||||| ||||| ||||| ||||||||||||||  | |||||    
T  20779006 tgcactgcgcaccattgtggccctcctcaccacaactaaaacaaacgttgtctccacgcttgcattcagccaacacatgacccttctgaccgcatctgaa 20779105  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| | ||| ||| ||||||| ||||||||    
T  20779106 acatttcttctcatcttgggtgcaagcattactcttgtggcc 20779147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 22464943 - 22465184
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| |||||| || |  || || ||||| | ||| || || || ||||| ||  |||| |||||||| ||||| |    
T  22464943 ttaaagaaacaagtacctctgataagtcgatcctcgttggtagtctgggtaccagtcaaagcgaaaaccttccctccaattctgaccttcttaggttgcg 22465042  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || || |||||||| ||    || ||| | || || ||||| ||||||||||| ||||| ||||  ||||||||||||||  | |||||    
T  22465043 tgcactgcgagctaatgtggccctcatcgccacaattaaaacaaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaa 22465142  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
     || ||||||||||| | | | ||| ||||||| ||||||||    
T  22465143 acatttcttctcatcttggatgcaagcattactcttgtggcc 22465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 345
Target Start/End: Original strand, 23669772 - 23669969
Alignment:
Q  148 atatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttct 247  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||| | | ||||||||||||||| ||     | ||||||||||| |||||||||||||    
T  23669772 atatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttct 23669871  T
Q  248 cgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    | |||||||   || |||| || ||||||||||  ||||||| ||| ||||| ||||||||||| | || |||||  || ||| || |||||||||||    
T  23669872 caccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcactg 23669969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 361
Target Start/End: Complemental strand, 21983328 - 21983192
Alignment:
Q  225 aacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttg 324  Q
    ||||||||| |||||||| ||||| |||||| || ||||||| || |||||||||   ||||| | ||| ||||| ||||||||||| | || ||||||     
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttc 21983229  T
Q  325 cccttgccagcaggagcactgagcggcttcggacgac 361  Q
    || ||| |||||||| |||||   |||||||||||||    
T  21983228 cctttgtcagcaggaacactgtagggcttcggacgac 21983192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 311
Target Start/End: Original strand, 43122520 - 43122770
Alignment:
Q  61 gcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgct 160  Q
    |||||||| || ||||| || ||||||||||| || || || ||||| ||||||| ||| || ||||| |  || ||  |||| || |||||||||||||    
T  43122520 gcaaacaccttgccacctgtcctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcgtcacaattgaagcaaacaatatcaccacgct 43122619  T
Q  161 tgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaa 260  Q
    |||| ||||||| | | || |||||||  ||| | | ||||||||||||||| ||     | || |||||||| ||||||||  |||||||||||||  |    
T  43122620 tgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctctcgccacacttgta 43122719  T
Q  261 gcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
    |||||| || || ||| ||   ||||||| ||| ||||| |||||||||||    
T  43122720 gcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcatt 43122770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 361
Target Start/End: Complemental strand, 21561176 - 21561040
Alignment:
Q  225 aacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttg 324  Q
    ||||||||| |||||||| ||||  |||||||| |||||||| || |||||||||   ||||| | ||| ||||| ||||||||||| | || ||| ||     
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttc 21561077  T
Q  325 cccttgccagcaggagcactgagcggcttcggacgac 361  Q
    || ||| |||||| |||||||   |||||||||||||    
T  21561076 cctttgtcagcagtagcactgtagggcttcggacgac 21561040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 16258189 - 16258103
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 16258103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 22591908 - 22591822
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 22595463 - 22595377
Alignment:
Q  223 caaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||| || |||||||||   ||||||| ||| ||||| |||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21561400 - 21561324
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccacc 77  Q
    ||||||||||||||||||||||||||||  ||||||||  | |||||| |||| | ||| |||||||| || |||||    
T  21561400 ttaaagaaacaagtacctctgataagtcggtcctcattaactgtttgcataccagtcaatgcaaacacctttccacc 21561324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 18782346 - 18782404
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggag 280  Q
    |||||||||||| |||||||||||||||||||| || || ||||| || || |||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggag 18782404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21983552 - 21983515
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatt 38  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  21983552 ttaaagaaacaagtacctctgataagtcggtcctcatt 21983515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 5913 - 6291
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| || |||||  | | |||||||||| | |  |  ||||||||||| |||||||| ||||||||||||||||| |    
T  5913 ttaaagaaacaagtacctctgataagcctgtcctcgctagtggtttgcgtatcagttagagcaaacactttaccaccggtcctaaccttcttcggttgtg 6012  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || || ||||||||||| || || || || |||||||||||||||||||    ||| || ||||||||| | |||||    
T  6013 tacactgtgaactaatatgtccttcctcgttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaa 6112  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   ||| |||||||| ||||||||||| || |||||||| |||||||| || |||| | |||  ||||||| |||||| ||     
T  6113 gcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctc 6212  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    |||||||||||||  | |||||| |||||| ||| |||||||||   ||||||||||||||||||||||| |||||||||    
T  6213 ctctcatcattta-accttgcttacccttgtcagtaggagcactatacggcttcggacgactctgctgtcccttgcctct 6291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 120; Significance: 3e-61; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 2148 - 1805
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||  | | |||| | | || ||||||||| | ||  ||||||||||| |||||||| ||||||||||||||||| |    
T  2148 ttaaagaaacaagtacctctgataagcatcttctcactagtgggttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtg 2049  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||||||||||| || |  || || ||||| |||||||||||   ||| || ||||||||| |||||||    
T  2048 tacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaa 1949  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||| ||   |||||||||||| |||||||||||||| ||||||||  ||||||| |||||||||||||  ||| ||| |||||| ||     
T  1948 gcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcctc 1849  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||| || |  || || || ||| |||||||||||||    
T  1848 ctctcatcattcagcctctgttttcctttgtcagcaggagcact 1805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 70480 - 70736
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |  || |||||||| | |||  |||| ||||| || || ||||| |||||||| ||||| |    
T  70480 ttaaagaaacaagtacctctgataagtcgatcctcattggtagtctgcgtaccagtcaaaacaaatacttttcctccagttctgaccttcttaggttgcg 70579  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| ||||| || |||||||| ||||| |||||||| || || ||||| ||||||||||| ||||| ||||| ||||| || |||||  | |||||    
T  70580 tgcactgtgaactaatgtggccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaa 70679  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
     |||||||||||||| ||||| || |||||||  |||||||||||| | ||||||||    
T  70680 acacttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacactt 70736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 11952 - 11723
Alignment:
Q  151 tcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgc 250  Q
    ||||||||||||||||||||||    ||| || ||||||||| |||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  11952 tcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgc 11853  T
Q  251 cacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcgg 350  Q
    |||||||  | ||||| || |||| |||||  ||||||| |||||| || ||||||||||| ||||  ||||| || ||| |||||||||||||    ||    
T  11852 cacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctttcctttgtcagcaggagcactatatgg 11753  T
Q  351 cttcggacgactctgctgtctcttgcctct 380  Q
     || |||||||||||||||| ||| |||||    
T  11752 tttaggacgactctgctgtcccttacctct 11723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 461
Target Start/End: Complemental strand, 1507 - 1047
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||| | |  || ||| | || | ||| || |||||||| ||||| || ||||||||||| || ||||    
T  1507 ttaaagaaacaagtacctctgataagtcggtcctcactagtagtctgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgag 1408  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||  | ||||| || ||||| |||||||| || ||||||||   ||| || ||||||||| |||||||    
T  1407 tacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaa 1308  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||| ||||||| ||||||||||| || |||||||| || |||| ||| |||| |||||  ||||||| |||||| ||     
T  1307 gcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctc 1208  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  || || |||||| ||||||||||||||   ||||||||||||||||| |||| |||||||||||  |||| || ||| |||     
T  1207 ctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctctacgctcactcatcaccttgt 1108  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttct 461  Q
    ||| |||| |||| || |||| |||||   | ||| | |||||||| ||||||||||||||    
T  1107 aatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaagtttct 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 485
Target Start/End: Original strand, 7852 - 8336
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||| | |  || ||| | || | ||| || |||||||| ||||| || ||||||||||| || ||||    
T  7852 ttaaagaaacaagtacctctgataagtcggtcctcactagtagtctgcatgccagtcaacgcgaacactttaccacctgtcctaaccttcttaggctgag 7951  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || ||||||||  | ||||| || ||||| |||||||| || ||||||||   ||| || ||||||||| |||||||    
T  7952 tacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaa 8051  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    |||||||||||||||  |   |||| ||||||| ||||||||||| || |||||||| || |||| ||| |||| |||||  ||||||| |||||| ||     
T  8052 gcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctc 8151  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattga 400  Q
    ||||||||||| || |  || || |||||| ||||||||||||||   ||||||||||||||||| |||| |||||||||||  |||| || ||| |||     
T  8152 ctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctctacgctcactcatcaccttgt 8251  T
Q  401 aataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttctagaacccaatagccct 485  Q
    ||| |||| |||| || |||| |||||   | ||| | |||||||| |||||||||||||| || ||| |  | |||||||||||    
T  8252 aatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaagtttcttattttcgaataaccaatagccct 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 9217 - 8874
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  |||||||| || |||||||| ||||||||||||| ||| |    
T  9217 ttaaagaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacacattaccaccggtcctaaccttcttcgtttgtg 9118  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||| |||| || || || ||||||||||||||||| || | ||| || ||||| |||| ||||||   ||| || ||||||||| |||||||    
T  9117 tacactgcgaattgatttgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaa 9018  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||   ||| |||||||| ||||||| |||||| ||||||||  ||||||| || | ||||| ||  ||||||| |||||| ||     
T  9017 gcacttcttctcatccttatcacagacattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcctc 8918  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||| || |  ||||| |||||| | |||||||||||    
T  8917 ctctcatcattcagcctctgctttcccttgtctgcaggagcact 8874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 43 - 380
Target Start/End: Complemental strand, 438 - 101
Alignment:
Q  43 gtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatagc 142  Q
    ||||||||||| | ||| |||||||| || |||||||| ||||||||||||||||| || || || ||||| ||||| || || |||||||||||||| |    
T  438 gtttgcgtaccagtcaaagcaaacaccttgccaccggtcctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagttataac 339  T
Q  143 atactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcc 242  Q
    | || || || |||||||| ||||||||||    ||| |  ||||||||| || |||||||||||||||||||  |   ||| |||||||| ||||||||    
T  338 aaacaatgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcc 239  T
Q  243 tttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagca 342  Q
    ||||||||||||||| |||||||| || |||| |||||  ||||| | |||||| || |||||||||||||  |  ||||| |||||| |||||||||||    
T  238 tttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagca 139  T
Q  343 ctgagcggcttcggacgactctgctgtctcttgcctct 380  Q
     |   ||||||||||||||||||||||| |||||||||    
T  138 ttttacggcttcggacgactctgctgtcccttgcctct 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 388
Target Start/End: Complemental strand, 1073 - 681
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||| |||| | | |  ||||||||||| | ||| |||||||| || ||||| || ||||||||||||||||| |    
T  1073 ttaaagaaacaagtacctctgataagtctgtccttactagttgtttgcgtaccagtcaaagcaaacaccttaccaccagtcctaaccttcttcggttgtg 974  T
Q  101 tgcactgagaactga-----tatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatac 195  Q
    | ||||| |||||||     | || || || || |||||||||||||| || || ||||||||||| ||||||||||    ||| || ||||||||| ||    
T  973 tacactgcgaactgaactgatgtgaccttcctcgttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacac 874  T
Q  196 ctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgg 295  Q
     |||||||||||||||||||  |   ||| |||||||| ||||||||||| || |||||||| |||||||| || ||   |||||  ||||||| |||||    
T  873 atgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgg 774  T
Q  296 gtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcac 388  Q
    | || ||||||||||| ||||| ||||| |||||| ||||||||| |||    ||||||||||||||||| |||| ||| |||||||| ||||    
T  773 gcctcctctcatcattcagtcgctgcttacccttgtcagcaggagtactatatggcttcggacgactctgttgtcccttacctctacattcac 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 9968 - 9625
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| ||||||||| ||||||| | | |||||||||||| | ||  |||||||| || ||||| || ||||||||||||||||| |    
T  9968 ttaaagaaacaagtacctttgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacaccttaccaccagtcctaaccttcttcggttgcg 9869  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | || || ||||| ||||||||||| ||||||||||||||||| || | ||| || ||||| |||||| |||    ||| || ||||||||| |||||||    
T  9868 tacattgtgaacttatatggccctcctcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaa 9769  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||||||||||||||   ||| |||||||| |||||||| ||||| ||||||||  ||||||| || ||||||||||  |||||||  || || ||     
T  9768 gcacttcttctcatccttatcacagacattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctc 9669  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||| |  | |||||| |||||  ||||| |||||||    
T  9668 ctctcatcattcatcctttgctttcccttatcagcaagagcact 9625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 5289 - 5756
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| ||||| || || ||||| |  |||  |||||| || || |    
T  5289 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccagtcaacgcaaaaaccttgccacctgacctagacttcttaggctgcg 5388  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || |||||||| ||||| ||||| || | ||| |||||||| |||||||||||   ||| || ||||||||| |||||||    
T  5389 tacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaa 5488  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || ||| |||||||||||| ||||||||||| || |||||||| || ||||| || |||| |||||  ||||||| ||| || ||    
T  5489 gcacttcttctcat-ctcggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctctt-ggcct 5586  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     ||||||||||| | ||  ||||| |||||| ||| ||| ||||||  ||||||| || |||||||||||| |||| |||||   |||| || ||| |||    
T  5587 cctctcatcattcaatctctgcttacccttgtcagtaggggcactgtacggcttccgatgactctgctgtcccttgactctatgctcactcatcactttg 5686  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
     ||| |||| | || || |||| ||| |  ||| || |||||||||||||||| ||||| || |||||||    
T  5687 taatgagctttggtatcctcttcataaatcttgtagctacttaccaattcagaaaagttccttatcttct 5756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 70216 - 70684
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| || ||||||||||| || || |    
T  70216 ttaaagaaacaagtacctctgataagtcggtcctcattcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcg 70315  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||| ||| | |||||    
T  70316 tacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaa 70415  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
     ||||||||||||| || ||| ||| |||||||| |||||||||||||| ||||||||||||||||  || |||| |||||  ||||||| ||| || ||    
T  70416 acacttcttctcat-ctcggtcacacacattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcct 70514  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattg 399  Q
     ||||||||||| || |  || || || ||| |||||||||||||   ||| |||||||||||||| |||| ||| ||||| |  |||| || ||| ||     
T  70515 cctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgactctgttgtcccttacctctgcgctcactcatcacttta 70614  T
Q  400 aaataagctatcgtgtcgtcttaatagaatttgcagatacttaccaattcagagaagtttctgatcttct 469  Q
     ||| |||| | || || |||| ||||| | | ||| | |||||||||||||| || ||||| |||||||    
T  70615 taatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttcttatcttct 70684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 63715 - 63378
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||  || ||||||||||| || || |    
T  63715 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacttgtcctaaccttcttaggctgcg 63616  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || || |||||  |||| ||||| || ||||| ||| |||| |||||||||||   ||| || ||||||||| |||||||    
T  63615 tacactgcgaactgatatgaccttcctcattatagttgtagcaaacaatatccccatgcttacaatcagctaaagtgtgtcctttctgaccacacctgaa 63516  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
     ||||||||||||| || ||| |||||||||||| ||||||||||| || |||||||| || ||||| || |||| |||||  ||||||| |||||| ||    
T  63515 acacttcttctcat-ctcggtcacaaacattactcttgtggcctttatcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcct 63417  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcagg 338  Q
     ||||||||||| | || |||||| |||||| |||||||    
T  63416 cctctcatcattcaatctttgcttacccttgtcagcagg 63378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 1803 - 1547
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| ||||||||||| || || |||||||||||||||||||  |    
T  1803 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacactttgcccccagttctaaccttcttcggttcgg 1704  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| |||||| |||||||||| ||||| |  || || ||||||||||| ||||||||   ||| |||||||||||| |||||||    
T  1703 gacactgtgaactgatatgaccctctccattgcagttgtagcagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaa 1604  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| ||||||| ||   |||||||||||| ||||| |||||||| ||||||||    
T  1603 gcacttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacactt 1547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 455
Target Start/End: Complemental strand, 62950 - 62514
Alignment:
Q  19 ctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgatat 118  Q
    ||||||||||  ||||||||  | ||||||||||| | ||| ||||||||||| ||||| || ||||| ||||| || || || ||||| ||||||||||    
T  62950 ctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacactttgccacctgtcctaactttcttaggctgcgtacactgcgaactgatat 62851  T
Q  119 ggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatcctt 218  Q
    | || | |||||| ||||| ||| | || | ||| |||||||| |||||||||||   |||  | ||||||||| |||| ||||||||||||||||| |     
T  62850 gaccttattcattacagttgtagaaaacaacatccccacgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatg 62751  T
Q  219 ggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgt 318  Q
    |  ||| |||||||| |||||||||||||| |||||||| ||  |||| || |||| |||||  ||||||| ||| || || ||||||||||| | ||      
T  62750 gtcacatacattactcttgtggcctttctcaccacacttgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctc 62651  T
Q  319 tgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgtgtcgt 418  Q
    ||||| |||||| ||||||| |||||   ||||||||||||||||||||| | |||||||||||  |||| || ||| ||| ||| |||| | || || |    
T  62650 tgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgccccttgcctctacgctcactcatcaccttgtaatgagctttggtatcct 62551  T
Q  419 cttaatagaatttgcagatacttaccaattcagagaa 455  Q
    ||| ||| |   ||||| |||||||||| ||||||||    
T  62550 cttcatatatcctgcagctacttaccaactcagagaa 62514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 65494 - 65238
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| || |||||||| |  || |||||||| | ||| ||| ||||||| |||||||| ||||||||||| || || |    
T  65494 ttaaagaaacaagtacctctgataagcctgtcctcattggtagtctgcgtaccagtcaatgcatacacttttccaccggtcctaaccttctttggctggg 65395  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| |||||||| ||||| || ||||  || ||||| || || | ||| || | ||| |||| ||| |||  ||| || ||||||||| |||||||    
T  65394 tgcactgtgaactgatgtggccttcctcatcacaattataacaaacaacatctcctctcttacaattagccaacgtgtgtcctttctgaccacacctgaa 65295  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  65294 gcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacactt 65238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 15 - 455
Target Start/End: Original strand, 5562 - 5999
Alignment:
Q  15 acctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactg 114  Q
    ||||||||||||||  ||||||||  | ||||||||||| | ||| ||||||||||| ||||| || ||||||||||| ||||| || ||||| ||||||    
T  5562 acctctgataagtcggtcctcattcaccgtttgcgtaccagtcaacgcaaacactttgccacctgtcctaaccttcttaggttgcgtacactgcgaactg 5661  T
Q  115 atatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcat 214  Q
    ||||| || |||||||| || || ||||| || | ||| |||||||| |||||||||||   ||| || ||||||||| |||| ||||||||||||||||    
T  5662 atatgaccttcttcattacaattgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcat 5761  T
Q  215 ccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcattta 313  Q
     || | | ||| || ||||| |||||||||||||| |||||||| ||||||| ||| |||| |||||  ||||||| |||  | || ||||||||||| |    
T  5762 -ctcgatcacacacgttactcttgtggcctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattca 5860  T
Q  314 gtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgt 413  Q
     ||  ||||| |||||| |||||||    ||   ||||||||||||||| || |||| ||| ||||| |  |||| || ||| ||| |||||||| ||||    
T  5861 atctctgcttacccttgtcagcagg---gctatacggcttcggacgactatgttgtcccttacctctgcgctcactcatcaccttgtaataagctttcgt 5957  T
Q  414 gtcgtcttaatagaatttgcagatacttaccaattcagagaa 455  Q
     || |||| ||| |   ||||| |||||||||||||||||||    
T  5958 atcctcttcatatatcctgcagctacttaccaattcagagaa 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 11939 - 11683
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||| | |  ||||||||||| | ||| |||||||| |||||||| ||||||  ||||||||||| ||    
T  11939 ttaaagaaacaagtacctctgataagtcggtcctcactggtagtttgcgtaccagtcaaagcaaacaccttcccaccagttctagtcttcttcggttcag 11840  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| | ||| ||||| || ||| |||||||||| || || || || || ||||||||||  ||||||||   |||||||||||||||| |||||||    
T  11839 gacactgtgtactaatatgaccttctccattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaa 11740  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| | |||||  |   ||| |||||||| |||||||||||||  ||||||||    
T  11739 gcacttcctatcatctcttccacatacattactcttgtggcctttcttaccacactt 11683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 4500 - 4121
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | || |||||||| | ||| |||||||| || ||||| || ||||||||||| || || |    
T  4500 ttaaagaaacaagtacctctgataagtcggtcctcattcaccgtctgcgtaccagtcaaagcaaacaccttgccacctgtcctaaccttcttaggctgcg 4401  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || || ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||||||| |||| ||    
T  4400 tacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaa 4301  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || | | ||| ||||||||||||| | ||||||| |||||||| |||||||  || |||| |||||  ||||||| ||| || ||    
T  4300 gcacttcttctcat-ctcgatcacacacattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcct 4202  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
     ||||||||||| |  |  || || || ||| |||||||||||||   ||| ||||||||||||| ||||| ||| |||||    
T  4201 cctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcggacgactctactgtcccttacctct 4121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 569 - 825
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || || ||||||||||||||||||| ||    
T  569 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcag 668  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| |||||| |||||||||| ||||| || || || |||||||| || ||||||||   |||||||||||||||  |||||||    
T  669 gacactgtgaacttatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaa 768  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
    ||||||| ||||||| ||   ||||||||| || ||||||||||| || ||||||||    
T  769 gcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacactt 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 150 - 382
Target Start/End: Complemental strand, 4500 - 4268
Alignment:
Q  150 atcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcg 249  Q
    |||||||||||| |||||||||||   ||| || ||||||||| |||||||||| |||||||||||  |   |||||||||||| || ||||||||||||    
T  4500 atcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctcg 4401  T
Q  250 ccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcg 349  Q
    |||||||| |||||||| || |||| |||||  ||||||| |||||| || |||||||||||||  |  ||||| |||||| ||||||||||| ||  ||    
T  4400 ccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtacg 4301  T
Q  350 gcttcggacgactctgctgtctcttgcctctac 382  Q
    |||||||||||||||| |||| |||||||||||    
T  4300 gcttcggacgactctgttgtcccttgcctctac 4268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 254
Target Start/End: Complemental strand, 17148 - 17009
Alignment:
Q  115 atatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcat 214  Q
    ||||| |||||||| ||||||||  | || || ||||||||| ||||||| ||||||||   |||||||||||  ||| ||| ||| || |||||| | |    
T  17148 atatgaccctcttctttgcagttgaaacacacgatatcaccatgcttgcagtcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacct 17049  T
Q  215 ccttggtacaaacattacttttgtggcctttctcgccaca 254  Q
    |||  | ||||||| | || |||||||||||||| |||||    
T  17048 cctctggacaaacagtgctcttgtggcctttctcaccaca 17009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 11085 - 11395
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||    || |||||||| | ||| |||||||| ||||| ||||| ||| |||||||||| ||||    
T  11085 ttaaagaaacaagtacctctgataagtcggtcctcattaatagtctgcgtaccagtcaacgcaaacaccttccctccggtcctagccttcttcggctgag 11184  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| || |||||||| ||||||||||||||||| ||||| || || || |||||||| || |||||||   |||| |||||||||||| |||||||    
T  11185 tacactgtgagctgatatgaccctcttcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaa 11284  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| |||||||  |   |||| |||| || ||||||||||| || ||||||||  | ||||| || |||| |||||  ||||||| ||| || ||     
T  11285 gcacttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggactc 11384  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  11385 ctatcatcatt 11395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 514549 - 514239
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || || ||||||||||||||||||| ||    
T  514549 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccagtcaatgcaaacaccttgcccccagttctaaccttcttcggttcag 514450  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| |||||| |||||||||| ||||| || || || |||| ||| || |||| |||   ||| |||||||||||| |||||||    
T  514449 gacactgtgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacacttacattcagttaagctgtgtcccttctgaccacacctgaa 514350  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| |||| || ||   ||||||||| || |||||||||||||| ||||||||  | ||||| || |||| |||||  ||||||| ||| || ||     
T  514349 gcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctc 514250  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  514249 ctatcatcatt 514239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 5202 - 5471
Alignment:
Q  42 ggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgatatggccctcttcattgcagttatag 141  Q
    |||||||||||| | ||  ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||| || || ||||||||||||||     
T  5202 ggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgagtacactgcgaactgatatgaccttcctcattgcagttataa 5301  T
Q  142 catactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggc 241  Q
    || || |  || || ||||| |||| ||||||   ||| || |||| |||| |||||||||||||||||||||| ||   ||| ||||||||  ||||||    
T  5302 caaacaacgtctccccgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggc 5401  T
Q  242 ctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatt 311  Q
    |||||||||| |||||  ||||||| || ||||||||||  ||||||| | |||| || |||||||||||    
T  5402 ctttctcgccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcatt 5471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 1683 - 1304
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||||||||| ||||| || ||||||||||| ||||    
T  1683 ttaaagaaacaagtacctctgataagtcggtcctcattagtagtctgcgtaccagtcaatgcaaacactttccctccggtcctgaccttcttcggctgag 1584  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || |||||||||||||| ||||| || || || |||| ||| || |||||||    ||| ||||||| |||| |||| ||    
T  1583 tacactgcgaactgatatgaccttcttcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaa 1484  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| || ||||  |   |||| |||| || ||||||||||| || ||||||||  | || || || ||||||||||  ||||||| |||||| ||     
T  1483 acatttcctcacatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctc 1384  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    || |||||||| | |   || || |||||| ||||||||||||||   ||||| |||||||||||||||| ||| |||||    
T  1383 ctatcatcattcattttctgttttcccttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttacctct 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 127 - 380
Target Start/End: Original strand, 153726 - 153979
Alignment:
Q  127 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaa 226  Q
    ||||||||||||||||| || || || |||||||| |||||||||||   ||| || ||||||||| ||||||||||||||||||||||  |   ||| |    
T  153726 tcattgcagttatagcaaacaatgtctccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 153825  T
Q  227 cattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcc 326  Q
    ||||||| || |||| ||| || |||||||| |||||||| || ||||  ||||  ||||||| |||||| || ||||||||||| ||||| ||||| ||    
T  153826 cattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacc 153925  T
Q  327 cttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    |||| |||||||||||||    |||||||||||||||||||||| ||| |||||    
T  153926 cttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctct 153979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 151675 - 151775
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||| ||||||| ||||| || |||||| | | |||||||||||| | ||  ||||||||||| |||||||| |||||||||||||||||||    
T  151675 ttaaagaaacaaatacctctaataagcctgtcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgag 151774  T
Q  101 t 101  Q
    |    
T  151775 t 151775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 5341 - 4997
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||||  || |||||||| | ||| |||||||||||||||||||| ||| |||||||||| ||||    
T  5341 ttaaagaaacaagtacctctgataagtcggtcctcatttgtagtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgag 5242  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| || ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||| |||||||    
T  5241 tacactatgaactgatatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaa 5142  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| ||||||   |   |||| ||||  ||||||||||||| ||  ||| |||  | ||||| |||||||||||||  ||||||| |||||| ||     
T  5141 acatttcctctcatttctaccacaagcattgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctc 5042  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactg 345  Q
    || |||||||| |  |  ||||| || ||| ||||||||||||||    
T  5041 ctatcatcattcatcctctgcttccctttgtcagcaggagcactg 4997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 41843 - 42151
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || |||||||| | ||| |||||||| || || ||  |||||  ||||||||| | ||    
T  41843 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgcgtaccagtcaaagcaaacacctttcccccaattctagtcttcttcggctcag 41942  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| || ||  |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||| |||||||    
T  41943 gacactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaa 42042  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| | |||||  |   |||||||||||| |||||||||||||| ||||||||  ||||||| || ||| ||||||  ||||||| |||||| ||     
T  42043 gcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctc 42142  T
Q  301 ctctcatca 309  Q
    || ||||||    
T  42143 ctatcatca 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 42806 - 43184
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||| ||| |  || |||||||| || ||||| || |||| |||||| ||||| |    
T  42806 ttaaagaaacaagtacctctgataagtcggtcctcattaactgtttgcgcaccagtgaaagcaaacaccttgccacctgtcctaatcttcttaggttgcg 42905  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || ||| |||| || || ||||| || | ||| ||||||||  |||| |||||   ||| || ||||||| | |||| ||    
T  42906 tacactgcgaactaatatgaccttctgcattacaattgtagcaaacaacatccccacgcttaaaatccgctaaagtgtgtcctttctgactacacctaaa 43005  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || ||| |||||||||||| |||||||||||||| | |||||| || |||| ||| |||| |||||  ||||||| ||| || ||    
T  43006 gcacttcttctcat-ctcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagtaggagcatctctcctcttaggcct 43104  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctc 379  Q
     ||||||||||| |  |  || || |||||| ||||||| |||||   ||||||||||||||||| ||||| ||||||||    
T  43105 cctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtcccttgcctc 43184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 50320 - 50263
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcagga 279  Q
    |||| |||| ||||||||||||||||| ||||| |||||||| || || |||||||||    
T  50320 acaagcattgcttttgtggcctttctcaccacaattaaagcagacaatctcagcagga 50263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 17 - 378
Target Start/End: Original strand, 16761 - 17122
Alignment:
Q  17 ctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgagtgcactgagaactgat 116  Q
    ||||||||||||  ||||||||  | |||||| |||| | ||| | ||| || || ||||| || ||||||||||| |  || || ||||| ||||| ||    
T  16761 ctctgataagtcggtcctcattcacagtttgcataccagacaacgaaaataccttgccacctgtcctaaccttcttagtctgcgtacactgcgaactaat 16860  T
Q  117 atggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatcc 216  Q
    ||| || || ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||||||| |||| |||||||||||||||||     
T  16861 atgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc- 16959  T
Q  217 ttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagt 315  Q
    | | | ||| |||||||| |||||||||||||| |||||||| || ||||  || |||| |||||  ||||||| ||| || || ||||||||||| |||    
T  16960 tcgatcacacacattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagt 17059  T
Q  316 cgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcct 378  Q
       ||||| |||||| | |||||||||||   |||||||||||||||||| |||| |||||||    
T  17060 ttctgcttacccttgtcggcaggagcactatacggcttcggacgactctgttgtcccttgcct 17122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 999 - 689
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||   |||||||| |  |  |||||||| | ||| |||||||| || || |  ||||||||||||||||||| ||    
T  999 ttaaagaaacaagtacctctgataagttggtcctcattggtagactgcgtaccagtcaatgcaaacaccttgcccctagttctaaccttcttcggttcag 900  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||| ||||| |||||| |||| ||||||||||| || || || |||||||| || ||||||||   ||| ||||| |||||| |||||||    
T  899 gacactgcgaactaatatgaccctctccatttcagttatagcagacaatgtccccacgcttacattcagctaaactgtgtcccttttgaccacacctgaa 800  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
    ||||||| |||| || ||   ||||||||| || |||||||||||||| ||| ||||  | ||||| || |||| |||||  ||||||| ||| || ||     
T  799 gcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctc 700  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  699 ctatcatcatt 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 30522 - 30212
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||||  || |||||||| | ||| |||||||||||||||||||| ||| |||||||||| ||||    
T  30522 ttaaagaaacaagtacctctgataagtcggtcctcatttgttgtctgcgtaccagtcaatgcaaacactttcccaccggtcctagccttcttcggctgag 30423  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||  ||||||||||| || ||||| |||||||| |||||||| || || |||  ||| || |||||||    ||| || |||| |||| |||| ||    
T  30422 tacacttcgaactgatatgaccttcttctttgcagttgtagcatacaatgtccccattcttacattcagctagtttgtgtcctttcttaccacacctaaa 30323  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| ||| |||  |   |||| |||| || ||||||||||| || ||||||||| | ||||| || ||||||||||  ||| ||| |||||| ||     
T  30322 acatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatctttcctcttgggcctc 30223  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  30222 ctgtcatcatt 30212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 382
Target Start/End: Complemental strand, 555 - 357
Alignment:
Q  184 ttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgt 283  Q
    ||||||||| ||||||||||||||||||||||  |   ||||||| |||||||||||||||||||||||||||| || ||||| || ||   |||||  |    
T  555 ttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatctataggagcat 456  T
Q  284 ctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    |||||| |||||| ||||||||||||||||  |  ||||| |||||| ||| |||||||||   ||||||||||||||| ||||||| ||| |||||||    
T  455 ctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacgactgtgctgtcccttacctctac 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 1829 - 2190
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||| |||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| || | || |||||| || |       
T  1829 ttaaagaaacaagtacctttgataagtcggtcctcattcaccgtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaacttcttgggcttct 1928  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| ||||||||||  || ||||||||||| | ||| |||||||| |||||||||||    || || ||||| ||| |||| ||    
T  1929 tgcactgcgagctaatatgtccctcttcatcacaattatagcatacaacatc-ccacgcttacaatcagctaaagtatgtcctttctgtccacacctaaa 2027  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    ||||||||||||||| | ||| ||| |||||||| |||||||||||||| |||||||| |||||||  ||||||| |||||  |||| || ||| || ||    
T  2028 gcacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcct 2126  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactct 364  Q
     ||||||||||| || |  || || || ||| |||||| |||||| | ||| |||||||||||||    
T  2127 cctctcatcattcagcctctgtttacctttgtcagcagaagcact-aacggtttcggacgactct 2190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 19165 - 19021
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||| |||||||||||| || |||||| | | |||||||||||| | ||  ||||||||||| |||||||| ||||||||||||||||| |    
T  19165 ttaaagaaacaagcacctctgataagcctgtcctcactagtggtttgcgtaccagtcagagcaaacactttaccaccggtcctaaccttcttcggttgtg 19066  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcata 145  Q
    | ||||| ||||||||||| || || |||||||||||||||||||    
T  19065 tacactgcgaactgatatgaccttcctcattgcagttatagcata 19021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 12835 - 13081
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||| |||||||||   ||||||||  | ||||||||||| |  || |||||||| || ||||| || ||||||||||| || || |    
T  12835 ttaaagaaacaagtacccctgataagttggtcctcattcaccgtttgcgtaccagttaacgcaaacaccttgccacctgtcctaaccttcttaggctgcg 12934  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || |||||||| ||||| ||||| || | ||| |||||||| |||||||||||   ||| || ||||||||| |||| ||    
T  12935 tacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaa 13034  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttct 247  Q
    |||||||||||| ||   |  ||| |||||||| |||||||||||||    
T  13035 gcacttcttctcgtcacggtcacatacattactcttgtggcctttct 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 103 - 382
Target Start/End: Complemental strand, 12506 - 12229
Alignment:
Q  103 cactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagc 202  Q
    ||||| ||||||||||| || || |||||||||||||| || || || || |||||||| |||||| ||||   ||| || |||||| || |||| ||||    
T  12506 cactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagc 12407  T
Q  203 acttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactat-ttcagcaggagtgtctctccccttgggtcttc 301  Q
    ||||||||||||| ||   | |||||||||| ||||||||||||||||||||||| |||||| || |  | | |   |   ||||||| |||||| || |    
T  12406 acttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatctctacttaccctca---tctctcctcttgggcctac 12310  T
Q  302 tctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    |||||||||| ||||  ||||| |||||| ||||||||||||||  ||||||||||||||| |||| || |||||||||||    
T  12309 tctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctac 12229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 103 - 382
Target Start/End: Complemental strand, 20686 - 20409
Alignment:
Q  103 cactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagc 202  Q
    ||||| ||||||||||| || || |||||||||||||| || || || || |||||||| |||||| ||||   ||| || |||||| || |||| ||||    
T  20686 cactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagc 20587  T
Q  203 acttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactat-ttcagcaggagtgtctctccccttgggtcttc 301  Q
    ||||||||||||| ||   | |||||||||| ||||||||||||||||||||||| |||||| || |  | | |   |   ||||||| |||||| || |    
T  20586 acttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatctctacttaccctca---tctctcctcttgggcctac 20490  T
Q  302 tctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    |||||||||| ||||  ||||| |||||| ||||||||||||||  ||||||||||||||| |||| || |||||||||||    
T  20489 tctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctac 20409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 29635 - 30016
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||  |||||||| || ||||| ||   | ||||||| || |       
T  29635 ttaaagaaacaagtacctctgataagtcggtcctcattaacagtttgcgtaccagtcagagcaaacaccttgccacctgtcagagccttcttaggcttcc 29734  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| || |||||||  || || ||||| || | ||||||||||||||| |||||||    ||| || |||   ||| ||| |||    
T  29735 tgcactgcgagctaatatgaccttcttcatcacaattgtagcaaacaacatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaa 29834  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     |||||||||||||| | | ||||||||||||| |||||||| || || |||||||| ||  | ||||| |||  |||||  ||||||| | | || ||     
T  29835 acacttcttctcatcatggttacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctc 29934  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    ||||||||||| ||||  ||||| || ||| |||||||||||||   ||| ||||||||||||||||||| |||||||||||    
T  29935 ctctcatcattcagtctctgcttacctttgtcagcaggagcactagacggtttcggacgactctgctgtcccttgcctctac 30016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 30042 - 30298
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  || ||||||||   ||| |||||||| || |||||  |||||||||||||||| | ||    
T  30042 ttaaagaaacaagtacctctgataagtcggtcctcattggtagtctgcgtaccaatcaatgcaaacacctttccaccatttctaaccttcttcggctcag 30141  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
      ||||| ||||||||||| |||||| |||||||||| || || || || || |||||||| || |||||||    ||| |  ||||||||| |||||||    
T  30142 gacactgcgaactgatatgaccctctccattgcagttgtaacagacaatgtccccacgcttacattcagctaggttgtgtcttttctgaccacacctgaa 30241  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
     |||||| |||||||  |   |||||| || ||||||||||||||||| ||||||||    
T  30242 tcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccacactt 30298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 222 - 459
Target Start/End: Complemental strand, 5877 - 5640
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgc 321  Q
    |||||||||||| ||||||||||| || ||||||||  |  |||| || |||| |||||  ||||||| |||||| || ||||||||||| ||||  |||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  322 ttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgtgtcgtctt 421  Q
    || |||||| |||||||||||||   |||||||||| |||||||||||| |||||||||||  |||| || ||| ||| ||| |||| |||| || ||||    
T  5777 ttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttctt 5678  T
Q  422 aatagaatttgcagatacttaccaattcagagaagttt 459  Q
     |||||   | ||| | |||||||| ||||||||||||    
T  5677 catagatcctacagctgcttaccaaatcagagaagttt 5640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 12068 - 12282
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| ||||| || || ||||| || | ||||||||| || || |    
T  12068 ttaaagaaacaagtacctctgataagtcggtcctcattcacagtttgcgtaccagtcaacgcaaataccttgccacctgtccgaaccttcttaggctgcg 12167  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||| || |||||||| ||||| ||||| || ||||| |||| |||||||||||| ||   ||| || ||||| ||| | |||||    
T  12168 tacactgtgaactaatatgtccttcttcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcctttctgtccacatctgaa 12267  T
Q  201 gcacttcttctcatc 215  Q
     ||||||||||||||    
T  12268 acacttcttctcatc 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43615 - 43401
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | ||||||||||| | ||| |||||||| || ||||| || | ||||||||| || |       
T  43615 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccagtcaaagcaaacaccttgccacctgtccgaaccttcttgggcttct 43516  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||| || || ||||| ||||||||||  || |||||||| || | ||| |||||||| |||||||||||   ||| || ||||| ||| |||| ||    
T  43515 tgcactgcgagctaatatgaccctcttcatcacaattatagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaa 43416  T
Q  201 gcacttcttctcatc 215  Q
    |||||||||||||||    
T  43415 gcacttcttctcatc 43401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 1246 - 1150
Alignment:
Q  181 cccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcag 277  Q
    |||||||| ||| | ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcag 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 1468 - 1089
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  |||| |||||| | ||| |||||||| || ||||| ||   | ||||||| || |       
T  1468 ttaaagaaacaagtacctctgataagtcggtcctcattagtagttttcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcc 1369  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||||||||| || ||||| ||||||||||  || || ||||| || |||||||||||||| || ||||| ||   ||| || ||||  ||| | | |||    
T  1368 tgcactgagagctaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaa 1269  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||   |  ||| |||||||  ||||||||||| || ||||| ||||| || || || | || |||||  ||||||| | | || ||     
T  1268 acacttcttctcatcacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctc 1169  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||  ||||| |||||| || ||||||||||   ||| ||||||||||||||||||| ||| |||||    
T  1168 ctctcatcattcagtctctgcttacccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctct 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 28481 - 28102
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  |||||||| |  |||| |||||| | ||| |||||||| || ||||| ||   | ||||||| || |       
T  28481 ttaaagaaacaagtacctctgataagtcggtcctcattagtagttttcgtaccagtcaaagcaaacaccttgccacctgtcagagccttcttaggcttcc 28382  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||||||||| || ||||| ||||||||||  || || ||||| || |||||||||||||| || ||||| ||   ||| || ||||  ||| | | |||    
T  28381 tgcactgagagctaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaa 28282  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     ||||||||||||||   |  ||| |||||||  ||||||||||| || ||||| ||||| || || || | || |||||  ||||||| | | || ||     
T  28281 acacttcttctcatcacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctc 28182  T
Q  301 ctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
    ||||||||||| ||||  ||||| |||||| || ||||||||||   ||| ||||||||||||||||||| ||| |||||    
T  28181 ctctcatcattcagtctctgcttacccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctct 28102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 67304 - 66994
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||| ||||  |||||||| |  || ||| |||| | ||| ||||||||||| ||||| ||||||||| ||||||| | |     
T  67304 ttaaagaaacaagtacctctgatgagtcggtcctcattggtagtctgcataccagtcaatgcaaacacttttccaccagttctaaccctcttcggctcac 67205  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | || || ||||| ||||| || ||| |||||||||| ||||| || || || ||| |||| || |||||||    ||| ||||| |||||| |||||||    
T  67204 tacattgcgaactaatatgaccttctccattgcagttgtagcagacaatgtccccaagcttacattcagctaggttgtgtcccttttgaccacacctgaa 67105  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| ||||||   |   ||||||||| || ||||||||||| || ||||||||| | ||||| || || | |||||  ||||||| |||||||||     
T  67104 acatttcctctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggagcatctctcctcttgggtctc 67005  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  67004 ctatcatcatt 66994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 344
Target Start/End: Original strand, 799 - 955
Alignment:
Q  188 gaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctct 287  Q
    ||||| |||||||| ||||||||||||| ||   ||| |||||||| ||||||||||||| |||||||||  ||||||| || ||||||||||  |||||    
T  799 gaccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctct 898  T
Q  288 ccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    || ||| || || ||||||||||| | ||  ||||| |||||| |||||||||||||    
T  899 cctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcact 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 691 - 797
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||||| ||||| | | | |||||||||||| | ||  ||||||||||| |||||| | ||||||||||||||||| |    
T  691 ttaaagaaacaagtacctctgataagtcgatccttactagtggtttgcgtaccagtcagagcaaacactttaccaccgatcctaaccttcttcggttgtg 790  T
Q  101 tgcactg 107  Q
    | |||||    
T  791 tacactg 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 382
Target Start/End: Original strand, 115953 - 116113
Alignment:
Q  222 acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgc 321  Q
    |||||||||||| ||||||||||| || |||||| | || ||||| || |||| |||||  || |||| ||| || || ||||||||||| ||||  | |    
T  115953 acaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattcagtctcttc 116052  T
Q  322 ttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    || |||||| |||||||||||||   ||||||||||||||||||||||| |||||||||||    
T  116053 ttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctac 116113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 51759 - 52138
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||| ||||||||||||||||||  ||||||||  |  | |||||||| | ||| | |||||| || ||||| || | ||||||||| || || |    
T  51759 ttaaagaaataagtacctctgataagtcagtcctcattcacaatctgcgtaccagtcaaagtaaacaccttgccacctgtccgaaccttctttggctgcg 51858  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||| ||||  || |||||||  ||||||||| | || | ||||||| ||||||||| ||||||   ||| || |||| |||| |||| ||    
T  51859 tacactgtgaactaatattaccttcttcatcacagttatagaaaacaacatcaccatgcttgcaataagctaaagtgtgtcctttcttaccacacctaaa 51958  T
Q  201 gcacttcttctcatccttggt-acaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtct 299  Q
    |||||||||||||| || | | ||| |||||||| |||||||||||||| |||||||| || || |  || |||| |||||  ||||||| | | || ||    
T  51959 gcacttcttctcat-ctcgatcacatacattactcttgtggcctttctcaccacacttgaaacagataatctcagtaggagcatctctcctcctaggcct 52057  T
Q  300 tctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctct 380  Q
     ||||||||||| || |  || || || ||| |||||||||||||   | | |||||||| |||||||||| ||| |||||    
T  52058 cctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcggacggctctgctgtcccttacctct 52138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 251730 - 252037
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    |||||||||||||||||||||||||| |  |||||||| |  || |||||||| | | | |||||||||| ||||||||| ||| |   |||||| ||||    
T  251730 ttaaagaaacaagtacctctgataagccggtcctcattagtagtctgcgtaccagtccatgcaaacacttccccaccggtcctagc---cttcggctgag 251826  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    | ||||| ||||||||||| || ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||| |||| ||    
T  251827 tacactgtgaactgatatgaccttcttcgttgcagttttagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaa 251926  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtctt 300  Q
     || ||| |||||||  |   |||| |||  |||||||||||||| || |||||||| || || || || ||| || |||  ||||||| |||||| ||     
T  251927 acatttcctctcatctctaccacaagcatagcttttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcctc 252026  T
Q  301 ctctcatcatt 311  Q
    || ||||||||    
T  252027 ctatcatcatt 252037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 243 - 467
Target Start/End: Original strand, 3215 - 3439
Alignment:
Q  243 tttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagca 342  Q
    |||||| |||||||| |||||||  || |||| |||||  ||||||| |||||| || ||||||||||| | ||  ||||| |||||| ||||||| |||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggca 3314  T
Q  343 ctgagcggcttcggacgactctgctgtctcttgcctctacagtcacgcagcacattgaaataagctatcgtgtcgtcttaatagaatttgcagatactta 442  Q
    ||   |||||||||||||||||| |||| ||||||||| |  |||| || ||| ||  ||| |||| |||| || |||| ||| |   ||||| ||||||    
T  3315 ctatacggcttcggacgactctgttgtcccttgcctctgcgctcactcatcaccttataatgagctttcgtatcctcttcatatatcctgcaggtactta 3414  T
Q  443 ccaattcagagaagtttctgatctt 467  Q
    |||||||||| ||||| || |||||    
T  3415 ccaattcagaaaagttccttatctt 3439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 12058 - 12170
Alignment:
Q  154 ccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccac 253  Q
    ||||||||||| ||||||||   |||||||||||||||| |||||||||||||| | |||||  |   |||||||||||| |||||||||||||| ||||    
T  12058 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccac 12157  T
Q  254 acttaaagcaaac 266  Q
    ||||  |||||||    
T  12158 acttgtagcaaac 12170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11917 - 12011
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcgg 95  Q
    ||||||||||||||||||||||||||||  |||||||| |  || || ||||| | ||| |||||||| || |||||  |||||  |||||||||    
T  11917 ttaaagaaacaagtacctctgataagtcggtcctcattaggagtctgtgtaccagtcaaagcaaacacctttccaccaattctagtcttcttcgg 12011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 5710 - 5966
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccaccggttctaaccttcttcggttgag 100  Q
    ||||||||||||||||||||||||||||  ||||||||  | |||||||||||    |  ||||||||  | |||||||||| ||||||||| ||||       
T  5710 ttaaagaaacaagtacctctgataagtcggtcctcattcactgtttgcgtaccaattagagcaaacaccatgccaccggttcgaaccttcttaggtttct 5809  T
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    ||||||  || || || || ||||||||||  || ||||| || || | ||| ||||||||||||||||||||   ||| || ||||| ||| | |||||    
T  5810 tgcactacgagctaatgtgtccctcttcatcacaattataacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaa 5909  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacactt 257  Q
     |||||||||| |||      ||| |||||||| |||||||||||||| ||||||||    
T  5910 acacttcttcttatctcaatcacacacattactcttgtggcctttctcaccacactt 5966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 309
Target Start/End: Complemental strand, 23966 - 23811
Alignment:
Q  154 ccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccac 253  Q
    ||||||||||| ||||||||   |||||||||||||||| |||||||||||||| | |||||  |   ||| |||||||| |||||||||||||| ||||    
T  23966 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttctcaccac 23867  T
Q  254 acttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatca 309  Q
    ||||  | ||||| || ||| ||||||  ||||||| |||||| || || ||||||    
T  23866 acttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 23811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 36706 - 36859
Alignment:
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaa 200  Q
    |||| |||||||  ||||| |||||||| ||||| ||| |||| || ||||||| |||||||||||||||||||   ||||||||||  ||| ||| |||    
T  36706 tgcattgagaaccaatatgaccctcttccttgcaattaaagcacacaatatcactacgcttgcaatcagctaacgtatgacccttcttgccacaccggaa 36805  T
Q  201 gcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccaca 254  Q
     || |||||| | ||||  | ||||||||| || |||||||||||||| |||||    
T  36806 acatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccaca 36859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 344
Target Start/End: Complemental strand, 3941 - 3745
Alignment:
Q  148 atatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttct 247  Q
    ||||||||||||||||| ||||||| | | || |||||||  ||| | | ||||||||||||||| ||     | || |||||||| ||||||||  |||    
T  3941 atatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctct 3842  T
Q  248 cgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcact 344  Q
    ||||||||||  ||||||| || ||| ||| |   ||||||| ||| ||||| ||||||||||| | || ||| || |||||| |||||||||||||    
T  3841 cgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattcaatctttgtttccccttgtcagcaggagcact 3745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4088 - 4012
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacactttcccacc 77  Q
    |||||||||||||||||||| |||||||  ||||||||  | || || ||||||| ||| |||||||| || |||||    
T  4088 ttaaagaaacaagtacctcttataagtcggtcctcattaaccgtctgtgtaccggtcaatgcaaacacctttccacc 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 311
Target Start/End: Complemental strand, 1305 - 1190
Alignment:
Q  196 ctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgg 295  Q
    |||||||||||| |||||||  |   ||||||||| || |||||||||||||| ||||||||  | ||||| || ||||||||||  ||||||| |||||    
T  1305 ctgaagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 1206  T
Q  296 gtcttctctcatcatt 311  Q
    |||| || ||||||||    
T  1205 gtctcctatcatcatt 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 235 - 370
Target Start/End: Complemental strand, 33334 - 33199
Alignment:
Q  235 ttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccag 334  Q
    ||||||||||| || |||||||| || ||||| |||||| ||||||  ||||||| |||||| || ||||||||||| |  |  || || || ||| |||    
T  33334 ttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcag 33235  T
Q  335 caggagcactgagcggcttcggacgactctgctgtc 370  Q
    |||||||||||   || || ||||||||||||||||    
T  33234 caggagcactgtatggtttaggacgactctgctgtc 33199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9423 - 9353
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgtaccggccaaggcaaacacttt 71  Q
    |||| ||||||||||||||||||||||| ||||||| | | |||||||||||| | ||  |||||||||||    
T  9423 ttaatgaaacaagtacctctgataagtcgatcctcactagtggtttgcgtaccagtcagagcaaacacttt 9353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 28977 - 28871
Alignment:
Q  148 atatcaccacgcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttct 247  Q
    ||||||||| ||||||| ||||||||   |||||||||||  ||| ||| ||| || |||||  | ||||| | ||||||||| || |||||||||||||    
T  28977 atatcaccatgcttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttct 28878  T
Q  248 cgccaca 254  Q
    |||||||    
T  28877 cgccaca 28871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 774 - 669
Alignment:
Q  283 tctctccccttgggtcttctctcatcatttagtcgttgcttgcccttgccagcaggagcactgagcggcttcggacgactctgctgtctcttgcctctac 382  Q
    ||||||| ||| || || ||||||||||| ||||  |  || || ||| ||||||||||||||  ||| ||||||||||||||||||| ||| |||||||    
T  774 tctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctctac 675  T
Q  383 agtcac 388  Q
    | ||||    
T  674 actcac 669  T

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Target: scaffold0585; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4285 - 4248
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatt 38  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  4285 ttaaagaaacaagtacctctgataagtcggtcctcatt 4248  T

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Target: scaffold1220 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 1 - 97
Alignment:
Q  158 gcttgcaatcagctaacacgtgacccttctgaccatacctgaagcacttcttctcatccttggtacaaacattacttttgtggcctttctcgccaca 254  Q
    ||||||||||||||||    ||||||||||  ||| ||| ||| || |||||| | ||||| | ||||||||| ||||||||||||||||| |||||    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccaca 97  T

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Target: scaffold0028 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 55208 - 55280
Alignment:
Q  97 tgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcag 169  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| | ||||| || ||   ||||||||||||||    
T  55208 tgagtacactgagaactaatatgtccctcttcattgcagttaaaacatacaatgtcctgacgcttgcaatcag 55280  T

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Target: scaffold0819 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 322 - 413
Alignment:
Q  101 tgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgacca 192  Q
    ||||||||||||| ||||| |||||||| ||||| ||  |||| || ||||||  | ||||||||||||||||  | |||||||||| ||||    
T  322 tgcactgagaactaatatgaccctcttctttgcaattgaagcacacaatatcattatgcttgcaatcagctaatgcatgacccttcttacca 413  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 48869 - 48944
Alignment:
Q  97 tgagtgcactgagaactgatatggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagcta 172  Q
    ||||| ||||||||||| || || |||||||||||||||||| | ||||| || ||   |||||||||||||||||    
T  48869 tgagtacactgagaactaatttgtccctcttcattgcagttaaaacatacaatgtcttgacgcttgcaatcagcta 48944  T

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Target: scaffold1288 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51 - 1
Alignment:
Q  1 ttaaagaaacaagtacctctgataagtctatcctcatttgcggtttgcgta 51  Q
    ||||||||||||||||||||||||||||  |||||||| |  |||||||||    
T  51 ttaaagaaacaagtacctctgataagtcggtcctcattagttgtttgcgta 1  T

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