View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14955_low_5 (Length: 266)
Name: NF14955_low_5
Description: NF14955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14955_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 32982106 - 32981846
Alignment:
| Q |
1 |
tcatcacctctgggcttatttatggttaatcatcttctgacttgccactgaagttttcttctttttcccctgattttgcttgtgtagattctaattgagg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32982106 |
tcatcacctctgggcttatttatggttaatcatcttctgacttgccactgaagttttcttctttttcccctgattttgcttgtgtagattctaattgagg |
32982007 |
T |
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| Q |
101 |
ttgaccatctacaagatgtccctggtccatacattcagataaagggtgtttctagagatgctgtggcagcagcaggttcaatgcttaaattggatggttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32982006 |
ttgaccatctacaagatgtccctggtccatacattcagataaagggtgtttctaaagatgctgtggcagcagcaggttcgatgcttaaattggatggttc |
32981907 |
T |
|
| Q |
201 |
gtatactactaaggtattggcatttttgctttattttagtccctttcttttctctgctgct |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32981906 |
atatactactaaggtattggcatttttgctttattttagtccctttcttttctctggtgct |
32981846 |
T |
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