View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14957_high_15 (Length: 322)

Name: NF14957_high_15
Description: NF14957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14957_high_15
NF14957_high_15
[»] chr3 (34 HSPs)
chr3 (259-322)||(536285-536348)
chr3 (258-321)||(29030817-29030880)
chr3 (260-322)||(48152295-48152357)
chr3 (260-322)||(41670591-41670653)
chr3 (1-61)||(2105705-2105765)
chr3 (5-64)||(41834541-41834600)
chr3 (258-322)||(29573365-29573429)
chr3 (8-51)||(21160056-21160099)
chr3 (259-322)||(34057962-34058025)
chr3 (8-50)||(44762824-44762867)
chr3 (264-319)||(45693750-45693805)
chr3 (260-322)||(10811135-10811197)
chr3 (9-51)||(32651648-32651690)
chr3 (260-322)||(48405410-48405472)
chr3 (1-50)||(2563934-2563983)
chr3 (8-49)||(7824813-7824854)
chr3 (257-322)||(14207267-14207332)
chr3 (257-322)||(14215015-14215080)
chr3 (1-50)||(19468456-19468505)
chr3 (260-321)||(21196124-21196185)
chr3 (9-50)||(21549043-21549084)
chr3 (11-44)||(22365983-22366016)
chr3 (8-49)||(27397626-27397667)
chr3 (1-50)||(38130966-38131015)
chr3 (1-62)||(38894030-38894091)
chr3 (9-58)||(53221955-53222004)
chr3 (259-315)||(9311039-9311095)
chr3 (1-45)||(16663243-16663287)
chr3 (258-322)||(16969576-16969639)
chr3 (254-322)||(24482972-24483040)
chr3 (260-320)||(32362933-32362993)
chr3 (6-50)||(37465365-37465409)
chr3 (8-63)||(43316614-43316670)
chr3 (258-322)||(51464282-51464345)
[»] chr4 (46 HSPs)
chr4 (260-322)||(24509397-24509459)
chr4 (260-322)||(21025601-21025663)
chr4 (1-50)||(16733526-16733575)
chr4 (259-322)||(3078917-3078980)
chr4 (12-51)||(9972133-9972172)
chr4 (6-61)||(48472955-48473010)
chr4 (7-49)||(5185134-5185176)
chr4 (1-51)||(27871385-27871435)
chr4 (260-322)||(39158105-39158167)
chr4 (261-322)||(2401611-2401672)
chr4 (8-61)||(11144679-11144732)
chr4 (261-322)||(26909375-26909436)
chr4 (254-322)||(149494-149562)
chr4 (8-51)||(17976377-17976421)
chr4 (258-322)||(46634098-46634161)
chr4 (7-50)||(31760251-31760294)
chr4 (3-50)||(46745195-46745242)
chr4 (256-322)||(1031751-1031816)
chr4 (8-50)||(6087752-6087794)
chr4 (260-322)||(10994162-10994223)
chr4 (259-321)||(14443197-14443259)
chr4 (260-322)||(17475322-17475384)
chr4 (260-322)||(38864745-38864807)
chr4 (9-63)||(48171873-48171927)
chr4 (260-322)||(51255746-51255808)
chr4 (1-62)||(11949770-11949831)
chr4 (1-50)||(14202486-14202535)
chr4 (1-50)||(19124629-19124678)
chr4 (1-50)||(19908697-19908746)
chr4 (7-63)||(23628753-23628810)
chr4 (11-64)||(24063225-24063278)
chr4 (261-322)||(27354364-27354424)
chr4 (8-49)||(37381245-37381286)
chr4 (1-50)||(42316831-42316880)
chr4 (1-50)||(43034349-43034398)
chr4 (12-49)||(45289275-45289312)
chr4 (1-50)||(47704587-47704636)
chr4 (1-42)||(49041988-49042029)
chr4 (6-63)||(54151637-54151694)
chr4 (6-50)||(6459936-6459980)
chr4 (8-60)||(6610258-6610310)
chr4 (6-50)||(7030905-7030949)
chr4 (1-49)||(11300681-11300729)
chr4 (1-49)||(17423184-17423232)
chr4 (254-322)||(41082312-41082380)
chr4 (1-29)||(42344625-42344653)
[»] chr1 (45 HSPs)
chr1 (260-322)||(49660179-49660241)
chr1 (263-319)||(39712381-39712437)
chr1 (260-322)||(43560204-43560266)
chr1 (250-322)||(5771757-5771829)
chr1 (251-322)||(34254360-34254431)
chr1 (260-321)||(11037183-11037242)
chr1 (260-322)||(37516524-37516586)
chr1 (1-50)||(3777723-3777772)
chr1 (1-50)||(15382826-15382875)
chr1 (4-49)||(49868017-49868062)
chr1 (12-64)||(13779569-13779621)
chr1 (258-322)||(47642616-47642680)
chr1 (259-322)||(2362355-2362417)
chr1 (260-322)||(4213072-4213134)
chr1 (245-322)||(31847193-31847271)
chr1 (260-322)||(33070602-33070664)
chr1 (260-322)||(37619544-37619605)
chr1 (1-50)||(34632174-34632223)
chr1 (257-322)||(51436781-51436846)
chr1 (258-322)||(7919071-7919135)
chr1 (6-50)||(31759905-31759949)
chr1 (259-322)||(15470066-15470129)
chr1 (260-322)||(9566970-9567032)
chr1 (260-322)||(27352630-27352691)
chr1 (260-322)||(48983677-48983739)
chr1 (257-319)||(49931550-49931612)
chr1 (6-51)||(10843333-10843378)
chr1 (260-321)||(11947795-11947856)
chr1 (17-50)||(17034784-17034817)
chr1 (9-50)||(24978249-24978290)
chr1 (258-322)||(30744983-30745048)
chr1 (258-322)||(30766434-30766499)
chr1 (1-50)||(32560978-32561027)
chr1 (257-290)||(50239194-50239227)
chr1 (6-63)||(52441523-52441580)
chr1 (6-50)||(1603678-1603722)
chr1 (16-56)||(2880439-2880479)
chr1 (1-49)||(7803411-7803459)
chr1 (1-61)||(18166596-18166656)
chr1 (1-61)||(28979283-28979343)
chr1 (7-63)||(31061916-31061972)
chr1 (262-322)||(32926261-32926321)
chr1 (6-50)||(32950773-32950817)
chr1 (8-51)||(37824151-37824195)
chr1 (1-29)||(44507937-44507965)
[»] chr2 (35 HSPs)
chr2 (259-319)||(9048414-9048474)
chr2 (259-322)||(10833655-10833718)
chr2 (260-319)||(13711379-13711438)
chr2 (10-62)||(44694681-44694733)
chr2 (7-49)||(6723090-6723132)
chr2 (1-51)||(31166114-31166164)
chr2 (1-62)||(22571872-22571933)
chr2 (8-61)||(34345369-34345422)
chr2 (8-51)||(3079648-3079692)
chr2 (259-311)||(8293228-8293280)
chr2 (1-45)||(35281218-35281262)
chr2 (9-48)||(7539037-7539076)
chr2 (8-63)||(15427684-15427739)
chr2 (9-64)||(31837951-31838006)
chr2 (8-50)||(38709638-38709681)
chr2 (9-63)||(5168594-5168648)
chr2 (1-63)||(7206117-7206179)
chr2 (260-322)||(24766152-24766214)
chr2 (260-322)||(31296855-31296916)
chr2 (259-321)||(34134781-34134843)
chr2 (257-322)||(6170627-6170692)
chr2 (257-322)||(6999077-6999142)
chr2 (8-49)||(9389474-9389515)
chr2 (9-50)||(9547424-9547465)
chr2 (1-50)||(13000690-13000739)
chr2 (1-50)||(13100271-13100320)
chr2 (9-50)||(17280963-17281004)
chr2 (1-50)||(37320524-37320573)
chr2 (11-67)||(10195679-10195735)
chr2 (1-45)||(21482526-21482570)
chr2 (1-45)||(25186249-25186293)
chr2 (1-45)||(29734701-29734745)
chr2 (6-50)||(33063991-33064035)
chr2 (6-50)||(34977209-34977253)
chr2 (1-45)||(41778951-41778995)
[»] scaffold0416 (1 HSPs)
scaffold0416 (263-322)||(6861-6920)
[»] chr6 (24 HSPs)
chr6 (259-322)||(10335549-10335612)
chr6 (11-61)||(28363492-28363542)
chr6 (1-49)||(1918465-1918513)
chr6 (257-322)||(6531192-6531257)
chr6 (9-50)||(31140827-31140868)
chr6 (259-319)||(11635547-11635607)
chr6 (1-48)||(1794958-1795005)
chr6 (12-63)||(4922426-4922477)
chr6 (260-319)||(8505786-8505845)
chr6 (8-50)||(29976246-29976289)
chr6 (263-322)||(34570604-34570663)
chr6 (260-322)||(2242031-2242093)
chr6 (1-51)||(2726424-2726474)
chr6 (9-50)||(5414663-5414705)
chr6 (252-322)||(8747161-8747231)
chr6 (260-322)||(18141310-18141372)
chr6 (8-50)||(29283820-29283862)
chr6 (1-62)||(3358384-3358445)
chr6 (1-50)||(4450267-4450316)
chr6 (9-50)||(14552342-14552383)
chr6 (259-320)||(18065101-18065162)
chr6 (8-45)||(20381123-20381160)
chr6 (1-50)||(31971534-31971583)
chr6 (6-50)||(13496121-13496165)
[»] chr7 (34 HSPs)
chr7 (260-322)||(17945068-17945129)
chr7 (260-322)||(35600671-35600733)
chr7 (260-322)||(36703881-36703943)
chr7 (257-319)||(38656532-38656594)
chr7 (260-322)||(45815265-45815327)
chr7 (268-322)||(33776367-33776421)
chr7 (254-322)||(37899317-37899385)
chr7 (9-68)||(38911286-38911345)
chr7 (8-62)||(17853156-17853210)
chr7 (261-322)||(19880315-19880370)
chr7 (257-322)||(44175542-44175606)
chr7 (15-51)||(43201029-43201065)
chr7 (12-63)||(32855512-32855563)
chr7 (260-322)||(12007195-12007257)
chr7 (8-50)||(17883893-17883935)
chr7 (260-322)||(35586782-35586844)
chr7 (260-322)||(47448826-47448888)
chr7 (9-50)||(429193-429234)
chr7 (9-50)||(5317303-5317344)
chr7 (9-50)||(8879762-8879803)
chr7 (9-50)||(21136836-21136877)
chr7 (257-322)||(29763827-29763891)
chr7 (1-50)||(37495925-37495974)
chr7 (254-287)||(41458782-41458815)
chr7 (260-320)||(9363387-9363447)
chr7 (1-49)||(19599151-19599199)
chr7 (9-49)||(19684227-19684267)
chr7 (263-319)||(26018043-26018099)
chr7 (254-290)||(34654561-34654597)
chr7 (8-51)||(36765502-36765546)
chr7 (8-51)||(36769154-36769198)
chr7 (1-45)||(41250054-41250098)
chr7 (1-49)||(44106634-44106682)
chr7 (9-49)||(45425459-45425499)
[»] chr8 (32 HSPs)
chr8 (267-319)||(39692302-39692354)
chr8 (8-64)||(9055419-9055475)
chr8 (8-50)||(1877676-1877718)
chr8 (261-319)||(10592293-10592351)
chr8 (260-322)||(43285972-43286034)
chr8 (9-50)||(8984509-8984550)
chr8 (257-322)||(13884170-13884234)
chr8 (261-322)||(44061718-44061779)
chr8 (259-322)||(25987796-25987859)
chr8 (7-62)||(31086066-31086121)
chr8 (260-322)||(3946240-3946302)
chr8 (260-322)||(10692439-10692500)
chr8 (256-322)||(22960426-22960492)
chr8 (260-322)||(29440531-29440593)
chr8 (260-321)||(2621785-2621846)
chr8 (9-50)||(12249500-12249541)
chr8 (257-322)||(12284279-12284344)
chr8 (1-50)||(13357448-13357497)
chr8 (9-50)||(17062354-17062395)
chr8 (9-50)||(17585963-17586004)
chr8 (9-50)||(28084287-28084328)
chr8 (6-63)||(29293169-29293226)
chr8 (1-50)||(32421574-32421623)
chr8 (257-322)||(33451572-33451637)
chr8 (9-50)||(37999435-37999476)
chr8 (6-50)||(574389-574433)
chr8 (8-51)||(12261574-12261618)
chr8 (260-320)||(15716987-15717047)
chr8 (258-322)||(25830255-25830319)
chr8 (6-50)||(27718906-27718950)
chr8 (1-45)||(37938505-37938549)
chr8 (1-49)||(43778025-43778073)
[»] chr5 (37 HSPs)
chr5 (259-322)||(9742389-9742452)
chr5 (7-50)||(3671223-3671266)
chr5 (256-322)||(3109596-3109662)
chr5 (260-322)||(19981995-19982057)
chr5 (260-322)||(35075585-35075647)
chr5 (1-63)||(43358252-43358314)
chr5 (15-64)||(689538-689587)
chr5 (1-50)||(5107252-5107301)
chr5 (1-69)||(5246163-5246231)
chr5 (1-48)||(866034-866081)
chr5 (11-50)||(1745984-1746023)
chr5 (8-51)||(5614769-5614812)
chr5 (259-322)||(21922154-21922217)
chr5 (260-322)||(189712-189774)
chr5 (1-51)||(5974232-5974282)
chr5 (260-322)||(8920078-8920140)
chr5 (8-50)||(9893685-9893727)
chr5 (9-51)||(12285617-12285659)
chr5 (260-322)||(18695318-18695380)
chr5 (260-322)||(19481191-19481253)
chr5 (260-322)||(27546063-27546125)
chr5 (8-50)||(33645703-33645745)
chr5 (4-50)||(41650949-41650995)
chr5 (11-60)||(7846141-7846190)
chr5 (257-322)||(12779616-12779680)
chr5 (1-50)||(17145355-17145404)
chr5 (1-50)||(35109405-35109454)
chr5 (1-62)||(40837910-40837971)
chr5 (9-49)||(7713538-7713578)
chr5 (6-50)||(8545001-8545045)
chr5 (9-45)||(10773623-10773659)
chr5 (259-319)||(13461763-13461823)
chr5 (10-50)||(18147571-18147611)
chr5 (9-49)||(20258551-20258591)
chr5 (8-51)||(37146993-37147037)
chr5 (9-49)||(38756736-38756776)
chr5 (1-49)||(40445989-40446037)
[»] scaffold0432 (1 HSPs)
scaffold0432 (260-322)||(6529-6591)
[»] scaffold0045 (1 HSPs)
scaffold0045 (9-51)||(42222-42264)
[»] scaffold0004 (1 HSPs)
scaffold0004 (260-322)||(249152-249213)
[»] scaffold0110 (1 HSPs)
scaffold0110 (260-320)||(28338-28398)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-65)||(45933-45997)
[»] scaffold0040 (1 HSPs)
scaffold0040 (7-63)||(56776-56832)
[»] scaffold0011 (1 HSPs)
scaffold0011 (258-322)||(18593-18656)


Alignment Details
Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 536348 - 536285
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  536348 tgagaaatgatattttgacaaccattttgtgacaacctatgtgacaactttatctctcacactc 536285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 29030880 - 29030817
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  29030880 ttgataaatgatattttgacaatcattttgtgacaacctaggtgacaactttatctctcatact 29030817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 48152357 - 48152295
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  48152357 gagaaatgatattttgacaaccattttgtgacaatctatgtgacaactttatctctcatactc 48152295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 41670653 - 41670591
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||  |||||| |||||||||| |||||| ||||||||||||||||||||||||    
T  41670653 gagaaatgatatcatgacaaccattttgtgacaacctaggtgacaactttatctctcatactc 41670591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2105705 - 2105765
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    ||||||||||||||||||||||||||||||| | || |||||||||||||| || ||||||    
T  2105705 aacctcggaccttgcatatattatacattatttttaccaactgagttaagttcacgaggac 2105765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 41834541 - 41834600
Alignment:
Q  5 tcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaat 64  Q
    |||||| ||||||||||||| |||| | ||||||| ||||||||||| ||||||||||||    
T  41834541 tcggacattgcatatattatgcattgtttatatcatctgagttaagttcatgaggacaat 41834600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 29573429 - 29573365
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  |||| |||||||| | ||| | |||||||||||| ||||||||||||    
T  29573429 ttgagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactc 29573365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 21160099 - 21160056
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||    
T  21160099 gaccttacatatattatgcattatccatatcaactgagttaagt 21160056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 34058025 - 34057962
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||  |||  |||||| ||||||| | |||||||||||| ||||||||||||    
T  34058025 tgagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactc 34057962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 44762824 - 44762867
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaag 50  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  44762824 gaccttgcatatatttatacattgtctatatcaactgagttaag 44762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 45693750 - 45693805
Alignment:
Q  264 aatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    |||||||| ||||||| |||||||||| ||  || |||||||||||||||||||||    
T  45693750 aatgatatcttgacaaccattttgtgacaatttaggtgacaactttatctctcata 45693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 10811135 - 10811197
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| ||||||||||||    
T  10811135 gagaaatgatatttgaacaaccattttatgacaacttttgtgacaactttctctctcatactc 10811197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 32651690 - 32651648
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagt 51  Q
    |||||||||||||||||| |||| | |||||||||||||||||    
T  32651690 accttgcatatattatacgttatttctatcaactgagttaagt 32651648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 48405410 - 48405472
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||||||| ||| | ||| |||||||| ||||||||||||    
T  48405410 gagaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttctctctcatactc 48405472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2563983 - 2563934
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||| ||||| |||||||||| |||||| | ||||||||||||||||    
T  2563983 aacctcgaaccttacatatattattcattatttttatcaactgagttaag 2563934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 7824854 - 7824813
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  7824854 gaccttgcatatattatgtattgtctatatcaactgagttaa 7824813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 14207332 - 14207267
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  ||||  ||||||| | ||| | |||||||||||| ||||||||||||    
T  14207332 tttgagaaatgatatttgaacaacgattttgtaacaacttttgtgacaactttctctctcatactc 14207267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 14215080 - 14215015
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  ||||  ||||||| | ||| | |||||||||||| ||||||||||||    
T  14215080 tttgagaaatgatatttgaacaacgattttgtaacaacttttgtgacaactttctctctcatactc 14215015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19468505 - 19468456
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||| ||||||||||||||||||| |||| || ||| |||||||||||||    
T  19468505 aaccacggaccttgcatatattatgcattgtccataccaactgagttaag 19468456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 21196124 - 21196185
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    ||||||||||||||  |||  |||||||||| ||| | |||||||||||| |||||||||||    
T  21196124 gagaaatgatatttgaacatccattttgtgacaacttctgtgacaactttctctctcatact 21196185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 21549084 - 21549043
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||| || |||||||||||| ||||    
T  21549084 accttgcatatattatacattgtccatatcaactgagctaag 21549043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 22366016 - 22365983
Alignment:
Q  11 cttgcatatattatacattatctatatcaactga 44  Q
    ||||||||||||||||||||||| ||||||||||    
T  22366016 cttgcatatattatacattatctttatcaactga 22365983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 27397626 - 27397667
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||||||||| || ||| ||||||||||||    
T  27397626 gaccttgcatatattatacattgtccataccaactgagttaa 27397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38130966 - 38131015
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||| ||||||||||||||||||| |||| || ||| |||||||||||||    
T  38130966 aaccccggaccttgcatatattatgcattgtccataccaactgagttaag 38131015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38894091 - 38894030
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    |||| |||||||||||||| ||||||||| |  |||||||||||| ||||| ||| ||||||    
T  38894091 aaccccggaccttgcatattttatacattgttcatatcaactgagctaagttcataaggaca 38894030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 53222004 - 53221955
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagtccatgag 58  Q
    ||||| ||||||||||||||| ||  ||||||||||||||||| ||||||    
T  53222004 accttacatatattatacattgtccttatcaactgagttaagttcatgag 53221955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 9311039 - 9311095
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctct 315  Q
    |||||||||||||||  ||||||||||| ||||||  | |||||||||||| |||||    
T  9311039 tgagaaatgatatttgtacaatcattttctgataatatttgtgacaactttctctct 9311095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16663243 - 16663287
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    |||| ||||||||||||||||||| ||||||| ||| ||||||||    
T  16663243 aaccccggaccttgcatatattatgcattatccataccaactgag 16663287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 16969639 - 16969576
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||| |||| |||||| ||| ||| | | |||||||||| ||||||||||||    
T  16969639 ttgagaaatgatattttaacaaccatttt-tgacaacttttttgacaactttctctctcatactc 16969576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 24483040 - 24482972
Alignment:
Q  254 aaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||  |||  |||||||||| ||| | ||  |||||||| ||||||||||||    
T  24483040 aaatttgagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactc 24482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 32362933 - 32362993
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatac 320  Q
    ||||||||||||||  |||| |||||| ||| ||| | | |||||||||||||||||||||    
T  32362933 gagaaatgatatttgaacaaccattttttgacaacttttatgacaactttatctctcatac 32362993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 37465409 - 37465365
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||||||  ||  ||||||||||||    
T  37465409 cggaccttgcatatattatacattatcgttacaaactgagttaag 37465365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 43316614 - 43316670
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||||||||||||| || |||||||||||||||||||| ||||  || ||||||||    
T  43316614 gaccttgcatatatttatgcattatctatatcaactgagctaagctcacgaggacaa 43316670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 51464345 - 51464282
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  |||| || ||||||| ||| | | |||||||||||||||||||||||    
T  51464345 ttgagaaatgatatttgtacaaccactttgtgacaactttt-tgacaactttatctctcatactc 51464282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 24509459 - 24509397
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  24509459 gagaaatgatattttgacaaccattttgtgacaatctatgtgacaactttatctctcatactc 24509397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 21025601 - 21025663
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||| |||||    
T  21025601 gagaaatgatattttgacaaccattttgtgacaatttatgtgacaactttatctctcttactc 21025663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16733526 - 16733575
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  16733526 aacctcggatcttgcatatattatacattatctttatcaactgagttaag 16733575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 3078980 - 3078917
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||  ||||||||||||| | ||| | |||||||||||| ||||||||||||    
T  3078980 tgagaaatgatatttgtacaatcattttgtaacaacttttgtgacaactttctctctcatactc 3078917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 9972172 - 9972133
Alignment:
Q  12 ttgcatatattatacattatctatatcaactgagttaagt 51  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  9972172 ttgcatatattatacattatctctatcaactgagttaagt 9972133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 48473010 - 48472955
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||| || ||||||    
T  48473010 cggaccttgcaaatattatgcattatctttatcaactgagttaagttcacgaggac 48472955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 5185176 - 5185134
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  5185176 ggaccttacatatattatacattatctataccaactgagttaa 5185134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27871385 - 27871435
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||| |||||    
T  27871385 aacctcggaccttgcatatattatacattgtctctatcaaatgagctaagt 27871435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 39158105 - 39158167
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||||||| ||||||  | |||||||||||| ||||||||||||    
T  39158105 gagaaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactc 39158167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 2401611 - 2401672
Alignment:
Q  261 agaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||  |||  |||||||||| ||| | |||||||||||||||||||||||||    
T  2401611 agaaatgatatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactc 2401672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 11144679 - 11144732
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    ||||||||||||||||| |||| ||| ||||||||||| ||||| |||||||||    
T  11144679 gaccttgcatatattatgcattgtctttatcaactgaggtaagttcatgaggac 11144732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 26909375 - 26909436
Alignment:
Q  261 agaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||  ||||||||| || |||||||| |||||||||||||||||||    
T  26909375 agaaatgatattttatcaactattttgtgacaatctatgtgagaactttatctctcatactc 26909436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 149562 - 149494
Alignment:
Q  254 aaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||| |||||||||||||||  ||||||| ||| ||||||  | |||||||||||| ||||||||||||    
T  149562 aaatatgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactc 149494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 17976421 - 17976377
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  17976421 gaccttgcatatatttatacattgtctatatcaactgagttaagt 17976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 46634098 - 46634161
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  ||||||||||| | | ||| | |||||||||||||||||||||||||    
T  46634098 ttgagaaatgatatttgaacaatcatttttt-acaacttttgtgacaactttatctctcatactc 46634161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 31760294 - 31760251
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||    
T  31760294 ggaccttgcatatattatacattgtctataccaactgagctaag 31760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 46745242 - 46745195
Alignment:
Q  3 cctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||| ||||||||||||||||||||| || |||||||||||| ||||    
T  46745242 cctcgtaccttgcatatattatacattgtccatatcaactgagataag 46745195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 1031751 - 1031816
Alignment:
Q  256 atttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||  |||| || ||||||||||| | | |||||||||| ||||||||||||    
T  1031751 atttgagaaatgatatttgtacaaccactttgtgataacttct-tgacaactttctctctcatactc 1031816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 6087794 - 6087752
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||    
T  6087794 gaccttgcatatattatgcattatctataccaactgagctaag 6087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 10994223 - 10994162
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||||||| || || | |||||||||||||||||||||||    
T  10994223 gagaaatgatatttgtacaaccattttgtgacaatcttt-tgacaactttatctctcatactc 10994162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 14443197 - 14443259
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    |||||||||||||||  ||||||||||| ||| ||| | |||||||| ||| |||||||||||    
T  14443197 tgagaaatgatatttgaacaatcattttttgacaacttttgtgacaattttctctctcatact 14443259  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 17475322 - 17475384
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||| |||||| |||||||| | | |||||||||| ||||||||||||    
T  17475322 gagaaatgatatttgaacattcatttggtgataacttttttgacaactttctctctcatactc 17475384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 38864807 - 38864745
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||| ||||||||| ||| | | |||||||||| ||||||||||||    
T  38864807 gagaaatgatatttgtacaattattttgtgacaacttttttgacaactttctctctcatactc 38864745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 48171927 - 48171873
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||||||||||||||||||| ||| || |||||||||||||  ||| |||||||    
T  48171927 accttgcatatattatacattgtctctaccaactgagttaagctcataaggacaa 48171873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 51255746 - 51255808
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| ||||||||||||    
T  51255746 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactc 51255808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11949770 - 11949831
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    |||| ||||||||||||||||||| |||| || ||| |||||||| ||||  ||||||||||    
T  11949770 aaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcatgaggaca 11949831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14202486 - 14202535
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||| |||||||| |||||||||| ||||||| | |||||||||||||||    
T  14202486 aaccccggaccttacatatattatgcattatccaaatcaactgagttaag 14202535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19124629 - 19124678
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||| |||||||||||||||||  ||| ||| ||||||||||||||||    
T  19124629 aacctcagaccttgcatatattatgtattgtctttatcaactgagttaag 19124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19908746 - 19908697
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||| |||| ||  || |||||||||||||    
T  19908746 aacctcggaccttgcatatattatgcattgtccttaccaactgagttaag 19908697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 23628810 - 23628753
Alignment:
Q  7 ggaccttgcatatatt-atacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||||||||||| || |||| ||||||||||||||||| ||| |||||| ||||    
T  23628810 ggaccttgcatatatttatgcattgtctatatcaactgagttcagttcatgagaacaa 23628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 24063225 - 24063278
Alignment:
Q  11 cttgcatatattatacattatctatatcaactgagttaagtccatgaggacaat 64  Q
    |||||||||||||| |||| ||| ||||||||||||||||  ||| ||||||||    
T  24063225 cttgcatatattatgcattgtctctatcaactgagttaagatcataaggacaat 24063278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 27354424 - 27354364
Alignment:
Q  261 agaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||  ||||||||||| ||||||| | | ||| |||||||||||||||||||    
T  27354424 agaaatgatatttgaacaatcatttt-tgataacttttatgataactttatctctcatactc 27354364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 37381245 - 37381286
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||| |||||||||| ||||||||||||||| ||||||||    
T  37381245 gaccttacatatattatgcattatctatatcaattgagttaa 37381286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42316831 - 42316880
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||| || | ||| || |||||||||||||    
T  42316831 aacctcggaccttgcatatattatgcactgtctttaccaactgagttaag 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43034349 - 43034398
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||| ||||||||||||||||| |||| || ||| |||||||||||||    
T  43034349 aacctcagaccttgcatatattatgcattgtccataccaactgagttaag 43034398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 45289275 - 45289312
Alignment:
Q  12 ttgcatatattatacattatctatatcaactgagttaa 49  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  45289275 ttgcatatattatgcattatctgtatcaactgagttaa 45289312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47704636 - 47704587
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||| ||||| |||||||||||||||||  ||| |||||||||||||    
T  47704636 aacctcgaaccttacatatattatacattattcataccaactgagttaag 47704587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49041988 - 49042029
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaact 42  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  49041988 aaccccggaccttgcatatattatgcattgtctatatcaact 49042029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 54151637 - 54151694
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||| |||||||||||||||||||||  || |||||||||||||  || ||||||||    
T  54151637 cggactttgcatatattatacattatccttaccaactgagttaagctcacgaggacaa 54151694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 6459936 - 6459980
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||| |||||||||| |||| || |||||||||||||||||    
T  6459936 cggaccttacatatattatgcattgtccatatcaactgagttaag 6459980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 6610310 - 6610258
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagtccatgagga 60  Q
    ||||||||||||||||||||||||| |||  || |||||||||| || |||||    
T  6610310 gaccttgcatatattatacattatccatactaagtgagttaagttcacgagga 6610258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 7030905 - 7030949
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||| |||| |||| |||||| |||||||||||||    
T  7030905 cggaccttgcatattttatgcattgtctataccaactgagttaag 7030949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11300729 - 11300681
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    ||||||||||||| ||||| |||| ||| ||| ||||||||||||||||    
T  11300729 aacctcggaccttacatatgttatgcataatccatatcaactgagttaa 11300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17423184 - 17423232
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||| ||||||||||||||||||| |||| ||| || ||||||||||||    
T  17423184 aaccccggaccttgcatatattatgcattgtctctaccaactgagttaa 17423232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 41082312 - 41082380
Alignment:
Q  254 aaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||| ||||||||||||||  ||| | |||| |||||||| | | |||||||||| ||||||||||||    
T  41082312 aaattagagaaatgatatttgaacatttatttggtgataacttttatgacaactttctctctcatactc 41082380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 42344625 - 42344653
Alignment:
Q  1 aacctcggaccttgcatatattatacatt 29  Q
    |||||||||||||||||||||||||||||    
T  42344625 aacctcggaccttgcatatattatacatt 42344653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 49660179 - 49660241
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    
T  49660179 gagaaatgatattttaacaaccattttgtgacaacctatgtgacaactttatctctcatactc 49660241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 39712381 - 39712437
Alignment:
Q  263 aaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  39712381 aaatgatattttgacaaccattttgtgataatctatgtgacaactttatcgctcata 39712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 43560204 - 43560266
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||| |||| |||||||||| || ||| ||||||||||||||||||||||||    
T  43560204 gagaaatgatattttcacaaccattttgtgacaatctaggtgacaactttatctctcatactc 43560266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 5771829 - 5771757
Alignment:
Q  250 tattaaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||||||  ||||||| ||| ||||||  | |||||||||||| ||||||||||||    
T  5771829 tattaaatttgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactc 5771757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 34254431 - 34254360
Alignment:
Q  251 attaaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||| ||||||||||||||  ||| ||||||| ||| ||| | |||||||||||||||||||||||||    
T  34254431 attaaattagagaaatgatatttgaacattcattttatgacaacttctgtgacaactttatctctcatactc 34254360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 11037183 - 11037242
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    |||||||||||||||||||| |||||||||| ||||  ||||| ||||||||||||||||||    
T  11037183 gagaaatgatattttgacaaccattttgtgacaacc--tgtgataactttatctctcatact 11037242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 37516524 - 37516586
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||||||||||| | ||  ||| |||||| ||||||||||||||||    
T  37516524 gagaaatgatattttgacaatcattttgtaacaatttatatgacaattttatctctcatactc 37516586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3777772 - 3777723
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  3777772 aacctcgaaccttgtatatattatacattatccatatcaactgagttaag 3777723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15382826 - 15382875
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  15382826 aacctcggaccttgcatatattatacattgttcatatcaactgagttaag 15382875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 49868062 - 49868017
Alignment:
Q  4 ctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  49868062 ctcggaccttgcatatattatgcattatccatatcaactgagttaa 49868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 13779621 - 13779569
Alignment:
Q  12 ttgcatatattatacattatctatatcaactgagttaagtccatgaggacaat 64  Q
    ||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  13779621 ttgcatatattatgcattgtctatatcaactgagctaagttcatgaggacaat 13779569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 47642680 - 47642616
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  |||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  47642680 ttgagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactc 47642616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 2362355 - 2362417
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||  ||||||| ||| ||||||| | |||||||||||||||||||||||||    
T  2362355 tgagaaatgatatttgtacaatcactttttgataactt-tgtgacaactttatctctcatactc 2362417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 4213072 - 4213134
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  4213072 gagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactc 4213134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 31847271 - 31847193
Alignment:
Q  245 gaatgtattaaatttgagaaatgatattttgacaatcattttgtgataacc-tatgtgacaactttatctctcatactc 322  Q
    ||||| ||| |||||||||||||||||||  |||| |||||| |||||||| | | |||||||||| ||||||||||||    
T  31847271 gaatgaattcaatttgagaaatgatatttgtacaaccattttatgataaccttttatgacaactttctctctcatactc 31847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 33070602 - 33070664
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||| ||| ||| |||||||||| ||||| | ||||||||    
T  33070602 gagaaatgatattttgacaaccattttatgacaacttatgtgacaattttatttttcatactc 33070664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 37619544 - 37619605
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||| ||||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  37619544 gagaaatgatatttggacaaccatttt-tgataacttttgtgacaactttctctctcatactc 37619605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34632223 - 34632174
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||| ||||    
T  34632223 aacctcggatcttgcatatattatacattgtctataccaactgagctaag 34632174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 51436846 - 51436781
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  ||||| |||||| || ||  | |||||||||||||||||||||||||    
T  51436846 tttgagaaatgatatttgcacaataattttgagacaatttttgtgacaactttatctctcatactc 51436781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 7919135 - 7919071
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  ||||||| ||| ||||||| |  ||||||||||| ||||||||||||    
T  7919135 ttgagaaatgatatttgaacaatcaatttttgataactttcgtgacaactttctctctcatactc 7919071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 31759905 - 31759949
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||    
T  31759905 cggaccttgcatatattatgcattatccatatcaattgagttaag 31759949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 15470129 - 15470066
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||| |||| |||||| | ||||| | | |||||||||| ||||||||||||    
T  15470129 tgagaaatgatattttaacaaccatttttttataacttttttgacaactttctctctcatactc 15470066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 9567032 - 9566970
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| ||||||||||||    
T  9567032 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactc 9566970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 27352630 - 27352691
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||||||||||| | || ||||||||| ||||||||||||    
T  27352630 gagaaatgatatttgtacaaccattttgtgataacttttg-gacaactttctctctcatactc 27352691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 48983739 - 48983677
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| ||||||||||||    
T  48983739 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactc 48983677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 49931550 - 49931612
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    |||||||||||||||||  ||||||||||| | | ||| | |||||||||||| |||||||||    
T  49931550 tttgagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcata 49931612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10843333 - 10843378
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||||||| |||||||  ||||||||||| |||||    
T  10843333 cggaccttgcatatattatgcattatccttatcaactgagctaagt 10843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 11947795 - 11947856
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| |||||||||||    
T  11947795 gagaaatgatatttgtacaaccattttatgacaacttttgtgacaactttctctctcatact 11947856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 17034817 - 17034784
Alignment:
Q  17 tatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||| ||||||||||||||||    
T  17034817 tatattatacattatctttatcaactgagttaag 17034784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 24978290 - 24978249
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||  |||||||||| |||||||||||||    
T  24978290 accttgcatatattatgtattatctataccaactgagttaag 24978249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 30744983 - 30745048
Alignment:
Q  258 ttgagaaatgatattttg-acaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||| |||| |||||| | ||||| | |||||||||||| ||| ||||||||    
T  30744983 ttgagaaatgatattttgtacaaccattttctaataacttttgtgacaactttctctatcatactc 30745048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 30766434 - 30766499
Alignment:
Q  258 ttgagaaatgatattttg-acaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||| |||| |||||| | ||||| | |||||||||||| ||| ||||||||    
T  30766434 ttgagaaatgatattttgtacaaccattttctaataacttttgtgacaactttctctatcatactc 30766499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32561027 - 32560978
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||| |||||||||||||||||||||||| || ||| |||||||| ||||    
T  32561027 aaccccggaccttgcatatattatacattgtccataccaactgagataag 32560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 50239227 - 50239194
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtga 290  Q
    ||||||||||||||||||||||| ||||||||||    
T  50239227 tttgagaaatgatattttgacaaccattttgtga 50239194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 52441523 - 52441580
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||||||||||||||||| |||| |||||| |||||||| ||||  || ||||||||    
T  52441523 cggaccttgcatatattatgcattgtctataccaactgagctaagctcacgaggacaa 52441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 1603722 - 1603678
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||| ||||| ||||| ||| ||||||||||||||||||||    
T  1603722 cggaccttacatattttatatattgtctatatcaactgagttaag 1603678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 2880479 - 2880439
Alignment:
Q  16 atatattatacattatctatatcaactgagttaagtccatg 56  Q
    |||||||||| ||| ||||||||||||||||||||| ||||    
T  2880479 atatattatatattgtctatatcaactgagttaagttcatg 2880439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7803459 - 7803411
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||| |||||||||||||||||||||| || |||  |||||||||||    
T  7803459 aacctcagaccttgcatatattatacattgtccatacaaactgagttaa 7803411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18166656 - 18166596
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    |||| ||||| ||||||||||||| |||| |||||| |||||||| |||| ||| ||||||    
T  18166656 aaccccggactttgcatatattatgcattgtctataccaactgagctaagcccacgaggac 18166596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28979283 - 28979343
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    ||||||| | |||||||||||||| |||||||| |||||| |||| ||||| || ||||||    
T  28979283 aacctcgaatcttgcatatattatgcattatctctatcaaatgagctaagttcaggaggac 28979343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 31061916 - 31061972
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||||||||| ||| |||| ||  || |||||||||||||| |||||||||||    
T  31061916 ggaccttgcatataatatgcattgtccttaccaactgagttaagttcatgaggacaa 31061972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 32926261 - 32926321
Alignment:
Q  262 gaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||  ||||||||||| ||||||| | ||||| || ||| ||||||||||||    
T  32926261 gaaatgatatttgaacaatcattttatgataacttttgtgataattttttctctcatactc 32926321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 32950773 - 32950817
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| |||| | |||| |||||||||||||    
T  32950773 cggaccttgcatatattatgcattgtttataccaactgagttaag 32950817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 37824151 - 37824195
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  37824151 gaccttgcatatatttatacattttctatatcaactgagctaagt 37824195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 44507937 - 44507965
Alignment:
Q  1 aacctcggaccttgcatatattatacatt 29  Q
    |||||||||||||||||||||||||||||    
T  44507937 aacctcggaccttgcatatattatacatt 44507965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 9048474 - 9048414
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  9048474 tgagaaatgatattttgacaaccattttgtgataatctatgtaacaactttatctctcata 9048414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 10833718 - 10833655
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||    
T  10833718 tgagaaatgatattttgacaaccattttgtgacaatctatgtgacaattttatctctcatactc 10833655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 13711438 - 13711379
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    |||||||||||||||||||  |||||||||| |||||| |||||||||||||||||||||    
T  13711438 gagaaatgatattttgacacccattttgtgacaacctacgtgacaactttatctctcata 13711379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 44694733 - 44694681
Alignment:
Q  10 ccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    ||||||||||||||| |||| ||||||||||||||||||||| || |||||||    
T  44694733 ccttgcatatattatgcattgtctatatcaactgagttaagttcacgaggaca 44694681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 6723090 - 6723132
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  6723090 ggaccttgcatatattatacattgtccatatcaactgagttaa 6723132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31166114 - 31166164
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| ||||||    
T  31166114 aaccttggaccttacatatattatacattatctctatcaactgaattaagt 31166164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22571872 - 22571933
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    |||| ||||| ||||||||||||| |||| ||||||||||||||| ||||| || |||||||    
T  22571872 aaccccggacattgcatatattatgcattgtctatatcaactgagctaagttcacgaggaca 22571933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 34345369 - 34345422
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    |||||| ||||||||||  ||||||||||||||||||| ||||| |||||||||    
T  34345369 gaccttacatatattatgtattatctatatcaactgagataagttcatgaggac 34345422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3079692 - 3079648
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  3079692 gaccttgcatatatttatacattgtctatatcaactgagttaagt 3079648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 8293228 - 8293280
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttat 311  Q
    |||||||||||||||||||||  ||||||||||||  ||||| ||||||||||    
T  8293228 tgagaaatgatattttgacaactattttgtgataatttatgtaacaactttat 8293280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35281218 - 35281262
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    ||||||| |||||||||||||||||||||||| || |||||||||    
T  35281218 aacctcgaaccttgcatatattatacattatccatttcaactgag 35281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 7539076 - 7539037
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagtta 48  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  7539076 accttgcatatattatacattatccatatcaattgagtta 7539037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 15427739 - 15427684
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||||||||||||| ||| || |||||||||||| ||||  |||||||||||    
T  15427739 gaccttgcatatattatatattgtccatatcaactgagctaagctcatgaggacaa 15427684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 31837951 - 31838006
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagtccatgaggacaat 64  Q
    ||||| |||||||||||||||||| ||| ||| |||||||||| || |||||||||    
T  31837951 accttacatatattatacattatccataccaattgagttaagttcacgaggacaat 31838006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 38709681 - 38709638
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaag 50  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  38709681 gaccttgcatatatttatacattgtctatatcaactgagttaag 38709638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 5168594 - 5168648
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||||||||||| |||||||  ||||||||||||||||  ||||| |||||    
T  5168594 accttgcatatattatgcattatccctatcaactgagttaagctcatgatgacaa 5168648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7206179 - 7206117
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||||||||||||||||||| |||| ||| || |||||||| ||||  || ||||||||    
T  7206179 aacctcggaccttgcatatattatgcattgtctctaccaactgagctaagctcacgaggacaa 7206117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 24766152 - 24766214
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| | ||||| | ||||||||||||||||| |||||||    
T  24766152 gagaaatgatatttgtacaaccattttttaataacttttgtgacaactttatctcgcatactc 24766214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 31296916 - 31296855
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||||||| ||| | | |||||||||||||||||||||||    
T  31296916 gagaaatgatatttgtacaaccattttgtgacaacgttt-tgacaactttatctctcatactc 31296855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 34134843 - 34134781
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    |||||||||||||||| |||| |||||||| | ||| | | |||||||||| |||||||||||    
T  34134843 tgagaaatgatatttttacaaccattttgtaacaacttttctgacaactttctctctcatact 34134781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 6170627 - 6170692
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  |||  |||||| ||| ||| | |||||||||||| ||||||||||||    
T  6170627 tttgagaaatgatatttcaacatccattttatgacaacttttgtgacaactttctctctcatactc 6170692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 6999142 - 6999077
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  |||  |||||| ||| ||| | |||||||||||| ||||||||||||    
T  6999142 tttgagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactc 6999077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 9389515 - 9389474
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||||||||||||  |||||| ||||||||    
T  9389515 gaccttgcatatattatacattatccttatcaattgagttaa 9389474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 9547424 - 9547465
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  9547424 accttgcatatattatgcattgtccatatcaactgagttaag 9547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13000739 - 13000690
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||| |||||||||| |||||||| || |||||||| ||||    
T  13000739 aacctcggaccttacatatattatgcattatctttaccaactgagctaag 13000690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13100271 - 13100320
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||| ||||||||| ||||||| | | |||||||||||||    
T  13100271 aacctcggaccttggatatattatgcattatccaaaccaactgagttaag 13100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 17280963 - 17281004
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  17280963 accttgcatatattatacattattcatatcaactgagctaag 17281004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37320524 - 37320573
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||| |||||||||||||||| |||| ||| || |||||||||||||    
T  37320524 aacctcgaaccttgcatatattatgcattgtctttaccaactgagttaag 37320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 10195679 - 10195735
Alignment:
Q  11 cttgcatatattatacattatctatatcaactgagttaagtccatgaggacaattgt 67  Q
    |||||||||||||| ||||||| |||||||||||| ||||  || ||||| ||||||    
T  10195679 cttgcatatattatgcattatccatatcaactgagctaagctcacgaggataattgt 10195735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21482526 - 21482570
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    |||| |||||||||||||||||||||||||||  || ||||||||    
T  21482526 aaccccggaccttgcatatattatacattatccttaccaactgag 21482570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25186249 - 25186293
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    |||| ||||||||||||||||||| |||| || ||||||||||||    
T  25186249 aaccccggaccttgcatatattatgcattgtccatatcaactgag 25186293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29734745 - 29734701
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    |||| ||||||||||||||||||| |||| || ||||||||||||    
T  29734745 aaccacggaccttgcatatattatgcattgtccatatcaactgag 29734701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 33064035 - 33063991
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| |||| || |||||||||||| ||||    
T  33064035 cggaccttgcatatattatgcattgtccatatcaactgagctaag 33063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 34977253 - 34977209
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| |||| || ||| |||||||||||||    
T  34977253 cggaccttgcatatattatgcattgtccataccaactgagttaag 34977209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41778951 - 41778995
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    |||||||||||||||||||||||| |||| || | ||||||||||    
T  41778951 aacctcggaccttgcatatattatgcattgtccaaatcaactgag 41778995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 6861 - 6920
Alignment:
Q  263 aaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  6861 aaatgatattttgacaaccattttgtgacaatctatgtgacaactttatctctcatactc 6920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 10335549 - 10335612
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  10335549 tgagaaatgatattttgacaaccattttgtgacgacttatgtgacaactttatctctcatactc 10335612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 28363492 - 28363542
Alignment:
Q  11 cttgcatatattatacattatctatatcaactgagttaagtccatgaggac 61  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  28363492 cttgcatattttatacattatctatatcaactgagttaagctcatgaggac 28363542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1918465 - 1918513
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  1918465 aacctcggaccttgcatatattatgcattgtctataccaactgagttaa 1918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 6531257 - 6531192
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  |||  |||||||||| ||| |||| ||||||||| ||||||||||||    
T  6531257 tttgagaaatgatatttgaacatccattttgtgacaacttatgggacaactttctctctcatactc 6531192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 31140827 - 31140868
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  31140827 accttgcatatattatacattatctttatcagctgagttaag 31140868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 11635607 - 11635547
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    |||||||||||||||  ||||||||||| ||| ||| | |||||||||||| |||||||||    
T  11635607 tgagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcata 11635547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1794958 - 1795005
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagtta 48  Q
    ||||||||||||| |||||||||| |||| || |||||||||||||||    
T  1794958 aacctcggaccttacatatattatgcattgtccatatcaactgagtta 1795005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 4922426 - 4922477
Alignment:
Q  12 ttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||||||||||||||||  || ||||| |||||||| |||||||||||    
T  4922426 ttgcatatattatacattatccctaccaactaagttaagttcatgaggacaa 4922477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 8505845 - 8505786
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    ||||||||||||||  ||||||||||| ||| ||| | |||||||||||| |||||||||    
T  8505845 gagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcata 8505786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 29976289 - 29976246
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaag 50  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  29976289 gaccttgcatatatttatacattgtctatatcaactgagttaag 29976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 34570663 - 34570604
Alignment:
Q  263 aaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||  |||| |||||||| ||||| | |||||||||||| ||||||||||||    
T  34570663 aaatgatatttgtacaaccattttgtaataacttttgtgacaactttctctctcatactc 34570604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 2242093 - 2242031
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||||||| ||| ||  | |||||||||||| ||||||||||||    
T  2242093 gagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactc 2242031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2726424 - 2726474
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    |||| ||||||||||||||||||| |||| || ||| ||||||||||||||    
T  2726424 aaccccggaccttgcatatattatgcattgtccataccaactgagttaagt 2726474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 5414663 - 5414705
Alignment:
Q  9 accttgcatatatt-atacattatctatatcaactgagttaag 50  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  5414663 accttgcatatatttatacattgtctatatcaactgagttaag 5414705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 8747161 - 8747231
Alignment:
Q  252 ttaaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||| |||||| |||||||||| |||  |||||||||| ||| | ||| |||||||| ||||||||||||    
T  8747161 ttaaaattgagatatgatattttaacatccattttgtgacaacttttgttacaactttctctctcatactc 8747231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 18141372 - 18141310
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||| ||||||| ||| ||| | |||||||||||| ||||||||||||    
T  18141372 gagaaatgatatttaaacattcattttatgacaacttttgtgacaactttctctctcatactc 18141310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 29283862 - 29283820
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||| ||| || |||||||||||||    
T  29283862 gaccttgcatatattatacattgtctctaccaactgagttaag 29283820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3358445 - 3358384
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    |||||||||| ||||||||||||| |||| || | | |||||||||||||| || |||||||    
T  3358445 aacctcggactttgcatatattatgcattgtccaaaccaactgagttaagttcacgaggaca 3358384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4450316 - 4450267
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||| ||||||||||||||||||| |||| ||| ||||||||||| ||||    
T  4450316 aaccccggaccttgcatatattatgcattgtctttatcaactgagctaag 4450267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 14552383 - 14552342
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||| ||||||||| |||||||| ||||||||||||||||    
T  14552383 accttgtatatattatgcattatctctatcaactgagttaag 14552342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 18065162 - 18065101
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatac 320  Q
    |||||||||||||||  ||||||| ||| ||| ||| | |||||||||||| ||||||||||    
T  18065162 tgagaaatgatatttgaacaatcactttttgacaacttttgtgacaactttttctctcatac 18065101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 20381123 - 20381160
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgag 45  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  20381123 gaccttgcatatattatacattatccataccaactgag 20381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31971583 - 31971534
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||| |||| ||  || |||||||||||||    
T  31971583 aacctcggaccttgcatatattatgcattgtccttaccaactgagttaag 31971534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 13496165 - 13496121
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| |||| |  |||||||||||||||||    
T  13496165 cggaccttgcatatattatgcattgttcatatcaactgagttaag 13496121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 17945068 - 17945129
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  17945068 gagaaatgatattttgacaaccattttgtgacaac-tatgtgacaactttatctctcatactc 17945129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 35600671 - 35600733
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||    
T  35600671 gagaaatgatattttgacaaccattttgtgacaacctatgtgacaattttatctttcatactc 35600733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 36703943 - 36703881
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  36703943 gagaaatgatattttgacaaccattttgtgacaacatatgtgacaattttatctctcatactc 36703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 38656532 - 38656594
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    ||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||    
T  38656532 tttgagaaatgatattttgacaaccattttgtgagaacttatttgacaactttatctctcata 38656594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 45815327 - 45815265
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  45815327 gagaaatgatattttgacaaccattttgtgacaatatatgtgacaactttatctctcatactc 45815265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 33776367 - 33776421
Alignment:
Q  268 atattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  33776367 atattttgacaaccattttgtgacaacctatatgacaactttatctctcatactc 33776421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 37899317 - 37899385
Alignment:
Q  254 aaatttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||| ||||||||||||||  |||  |||||||||| ||| | |||||||||||||||||||||||||    
T  37899317 aaattagagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactc 37899385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 38911345 - 38911286
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagtccatgaggacaattgtt 68  Q
    ||||||||||||||||||||| ||| ||||||||||||||||  || | |||||||||||    
T  38911345 accttgcatatattatacattgtctttatcaactgagttaagctcacggggacaattgtt 38911286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 17853210 - 17853156
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    ||||||||||||||||||||||||| ||| ||| |||| |||| |||||||||||    
T  17853210 gaccttgcatatattatacattatcaataccaattgagctaagcccatgaggaca 17853156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 19880370 - 19880315
Alignment:
Q  261 agaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||| |||||||||||      ||||||||||||||||||||||||||||||    
T  19880370 agaaatgatattttcacaatcatttt------acctatgtgacaactttatctctcatactc 19880315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 44175542 - 44175606
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||| ||||||  ||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  44175542 tttgagaaataatatttgtacaatcattttgtgataacttttgt-acaactttctctctcatactc 44175606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 43201029 - 43201065
Alignment:
Q  15 catatattatacattatctatatcaactgagttaagt 51  Q
    ||||||||||||| |||||||||||||||||||||||    
T  43201029 catatattatacactatctatatcaactgagttaagt 43201065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 32855563 - 32855512
Alignment:
Q  12 ttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||||||||||| ||||||  |||||||||||||||||| |||||| ||||    
T  32855563 ttgcatatattatgcattattcatatcaactgagttaagttcatgagaacaa 32855512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 12007257 - 12007195
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| ||||||||||||    
T  12007257 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactc 12007195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 17883935 - 17883893
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||    
T  17883935 gaccttgcatatattatacattatccatatcaagtgagctaag 17883893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 35586844 - 35586782
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||  |||||| ||||||| | |||||||||||| ||||||||||||    
T  35586844 gagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactc 35586782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 47448826 - 47448888
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||| ||| ||| | |||||||||||| ||||||||||||    
T  47448826 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactc 47448888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 429193 - 429234
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||  |||||| |||||||||||||||||    
T  429193 accttgcatatattatgtattatccatatcaactgagttaag 429234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 5317303 - 5317344
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  5317303 accttgcatatattatgcattttccatatcaactgagttaag 5317344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 8879762 - 8879803
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  8879762 accttgcatatattatgcattgtctataccaactgagttaag 8879803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 21136877 - 21136836
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  21136877 accttgcatatattatacattgtccataccaactgagttaag 21136836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 29763827 - 29763891
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  |||| |||||||||||||| | ||| |||||||| | ||||||||||    
T  29763827 tttgagaaatgatatttgtacaaccattttgtgataacttttgt-acaactttctttctcatactc 29763891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37495925 - 37495974
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||| |||||||||||||||||| ||||||| ||||||| | |||||||    
T  37495925 aaccttggaccttgcatatattatgcattatcaatatcaattaagttaag 37495974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 287
Target Start/End: Original strand, 41458782 - 41458815
Alignment:
Q  254 aaatttgagaaatgatattttgacaatcattttg 287  Q
    ||||||||| ||||||||||||||||||||||||    
T  41458782 aaatttgagcaatgatattttgacaatcattttg 41458815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 9363387 - 9363447
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatac 320  Q
    ||||||||||||||  ||||||||||| | | ||| | |||||||||||||||||| ||||    
T  9363387 gagaaatgatatttgtacaatcattttataacaacttttgtgacaactttatctctaatac 9363447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19599199 - 19599151
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||| ||||||||||||||||||| |||| || ||| ||||||||||||    
T  19599199 aaccccggaccttgcatatattatgcattgtccataccaactgagttaa 19599151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19684227 - 19684267
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaa 49  Q
    ||||| |||||||||| |||| |||||||||||||||||||    
T  19684227 accttacatatattatgcattgtctatatcaactgagttaa 19684267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 26018043 - 26018099
Alignment:
Q  263 aaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    |||||||||||  ||||||||||| | ||||| | ||||||||| ||||||||||||    
T  26018043 aaatgatatttgtacaatcattttataataacttttgtgacaacattatctctcata 26018099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 34654561 - 34654597
Alignment:
Q  254 aaatttgagaaatgatattttgacaatcattttgtga 290  Q
    ||||||||||||||||||||  |||||||||||||||    
T  34654561 aaatttgagaaatgatatttatacaatcattttgtga 34654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 36765546 - 36765502
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  36765546 gaccttgcatatatttatacattgtctatatcaactgagctaagt 36765502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 36769198 - 36769154
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  36769198 gaccttgcatatatttatacattgtctatatcaactgagctaagt 36769154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41250054 - 41250098
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    ||||||||||||||||||||||||||||| |   |||||||||||    
T  41250054 aacctcggaccttgcatatattatacattgttcttatcaactgag 41250098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44106682 - 44106634
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||| |||||||||||||  ||| ||| |||||||||||||||    
T  44106682 aacctcggactttgcatatattatgtattgtctctatcaactgagttaa 44106634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 45425499 - 45425459
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||| |||| ||| |||||||||||||||    
T  45425499 accttgcatatattatgcattgtctttatcaactgagttaa 45425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 39692302 - 39692354
Alignment:
Q  267 gatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  39692302 gatattttgacaaccattttgtgacaacctatgtgacaactttatctctcata 39692354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 9055419 - 9055475
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaat 64  Q
    |||||||||||||||||||||||| | ||||||||||| ||||| ||||| ||||||    
T  9055419 gaccttgcatatattatacattatttttatcaactgagctaagttcatgaagacaat 9055475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 1877676 - 1877718
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  1877676 gaccttgcatatattatgcattgtctatatcaactgagttaag 1877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 10592351 - 10592293
Alignment:
Q  261 agaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    ||||||||||| || ||||||||||| ||||||| | |||||||||||| |||||||||    
T  10592351 agaaatgatatctttacaatcattttttgataacttttgtgacaactttctctctcata 10592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 43286034 - 43285972
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||| ||||| |||||| | ||||| | |||||||||||| ||||||||||||    
T  43286034 gagaaatgatatttggacaaccattttctaataacttttgtgacaactttctctctcatactc 43285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 8984509 - 8984550
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  8984509 accttgcatatattatacattatccataccaactgagttaag 8984550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 13884234 - 13884170
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  ||||||||||| ||| || || |||||||||||| ||||||||||||    
T  13884234 tttgagaaatgatatttgtacaatcattttttgacaa-ctttgtgacaactttctctctcatactc 13884170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 44061718 - 44061779
Alignment:
Q  261 agaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||  |||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  44061718 agaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactc 44061779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 25987859 - 25987796
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||  |||| |||||| | | ||| | |||||||||||||||||||||||||    
T  25987859 tgagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttatctctcatactc 25987796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 31086121 - 31086066
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    |||||||||||| |||||||||||||| | |||||| |||||||| || |||||||    
T  31086121 ggaccttgcatacattatacattatctttgtcaactaagttaagttcacgaggaca 31086066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 3946240 - 3946302
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||  |||||||||| ||| | |||||||||||| ||||||||||||    
T  3946240 gagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactc 3946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 10692439 - 10692500
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||||||| | ||||  | |||||||||||||||||||||||||    
T  10692439 gagaaatgatatttgaacaatcatttttt-ataatttttgtgacaactttatctctcatactc 10692500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 22960492 - 22960426
Alignment:
Q  256 atttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||  |||| ||||||  |||||  | |||||||| ||||||||||||||||    
T  22960492 atttgagaaatgatatttgtacaaccattttaggataatttctgtgacaattttatctctcatactc 22960426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 29440593 - 29440531
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||| |||||| |||||||| | |||||||||||| | ||||||||||    
T  29440593 gagaaatgatatttgaacattcatttggtgataacttttgtgacaactttctttctcatactc 29440531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 2621785 - 2621846
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatact 321  Q
    ||||||||||||||  ||||  | ||||||||||| | |||||||||||||||||| |||||    
T  2621785 gagaaatgatatttatacaactaatttgtgataacttttgtgacaactttatctcttatact 2621846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 12249500 - 12249541
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||||| || ||| |||||||||    
T  12249500 accttgcatatattatacattatctttaccaattgagttaag 12249541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 12284344 - 12284279
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  |||| ||||||  || ||| | |||||||||||| ||||||||||||    
T  12284344 tttgagaaatgatatttgaacaaccatttttggacaacgtttgtgacaactttctctctcatactc 12284279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13357448 - 13357497
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||| |||||||||||||||| |||| || ||| |||||||||||||    
T  13357448 aacctcgtaccttgcatatattatgcattgtccataccaactgagttaag 13357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 17062354 - 17062395
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||  ||| ||||||||||||||||||||    
T  17062354 accttgcatatattatgtattgtctatatcaactgagttaag 17062395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 17586004 - 17585963
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||  ||| ||||||||||||||||||||    
T  17586004 accttgcatatattatgtattgtctatatcaactgagttaag 17585963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 28084328 - 28084287
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||| |||| ||| ||||||||||||||||    
T  28084328 accttgcatatattattcattgtctctatcaactgagttaag 28084287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 29293226 - 29293169
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||||||  || ||||||||    
T  29293226 cggaccttacatatattatatattgtctatattaactgagttaagctcacgaggacaa 29293169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32421623 - 32421574
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||| |||||||||||||||||||| ||| || ||| |||||||||||||    
T  32421623 aaccccggaccttgcatatattatatattgtccataccaactgagttaag 32421574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 33451637 - 33451572
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||| || |||||||  ||||||||||| ||| ||| | |||||||||||| ||||||||||||    
T  33451637 tttgagtaacgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatactc 33451572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 37999435 - 37999476
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  37999435 accttgcatatattatgcattatccataccaactgagttaag 37999476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 574433 - 574389
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||| |||||||||| |||| ||||||||||||||| ||||    
T  574433 cggaccttacatatattatgcattgtctatatcaactgagctaag 574389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 12261574 - 12261618
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  12261574 gaccttgcatatatttatacattgtctatatcaactgagctaagt 12261618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 15717047 - 15716987
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatac 320  Q
    ||||||||||||||  | ||||| ||| ||||||| | |||||||||||| ||||||||||    
T  15717047 gagaaatgatatttgaataatcactttttgataacttttgtgacaactttttctctcatac 15716987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 25830319 - 25830255
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  |||| |||||| | | ||| | |||||||||||| ||||||||||||    
T  25830319 ttgagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactc 25830255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 27718906 - 27718950
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| |||| || |||||||||||| ||||    
T  27718906 cggaccttgcatatattatgcattgtccatatcaactgagctaag 27718950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37938549 - 37938505
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgag 45  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  37938549 aacctcggactttgcatatattatgcattatccataccaactgag 37938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43778073 - 43778025
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||| |||||||||||| |||| |||| |||||| ||||||||||||    
T  43778073 aacctcagaccttgcatattttatgcattgtctataccaactgagttaa 43778025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 9742452 - 9742389
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||||| |||||||||| ||  ||| ||||||||| |||||||||||||    
T  9742452 tgagaaatgatattttgacaaccattttgtgacaagttatctgacaacttcatctctcatactc 9742389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 3671266 - 3671223
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  3671266 ggaccttgcatatattatacattatccttatcaactgagttaag 3671223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 3109662 - 3109596
Alignment:
Q  256 atttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||||  ||||||| ||||||| ||| | ||||||||| || ||||||||||||    
T  3109662 atttgagaaatgatatttgtacaatcaatttgtgacaacttttgtgacaacattctctctcatactc 3109596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 19982057 - 19981995
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||| ||||||||||| ||||||  | |||||||| ||| ||||||||||||    
T  19982057 gagaaatgatattttaacaatcattttttgataatttttgtgacaattttttctctcatactc 19981995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 35075647 - 35075585
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||||||| ||| |||  ||||||||||||| ||||||||||||    
T  35075647 gagaaatgatatttgaacaatcattttttgacaactgatgtgacaactttttctctcatactc 35075585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43358314 - 43358252
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||| ||||  || ||||||||    
T  43358314 aacctcggatcttgcatattttatacattatctataccaactgagctaagctcacgaggacaa 43358252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 689587 - 689538
Alignment:
Q  15 catatattatacattatctatatcaactgagttaagtccatgaggacaat 64  Q
    ||||||||||||||| || |||||||||||||||||| || |||||||||    
T  689587 catatattatacattgtccatatcaactgagttaagttcacgaggacaat 689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5107252 - 5107301
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  5107252 aacctcggaccttgcatatattatgcattattcataccaactgagttaag 5107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5246163 - 5246231
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaattgttg 69  Q
    ||||||| |||||||||||||||| |||| |||||| ||| ||||||||||  ||||||| | ||||||    
T  5246163 aacctcgaaccttgcatatattatgcattgtctataccaattgagttaagtttatgaggatatttgttg 5246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 866034 - 866081
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagtta 48  Q
    |||| |||||||||||||| |||||||||||| ||| |||||||||||    
T  866034 aaccccggaccttgcatattttatacattatccataccaactgagtta 866081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 1746023 - 1745984
Alignment:
Q  11 cttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  1746023 cttgcatatattatacattatctttaacaactgagttaag 1745984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 5614812 - 5614769
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||    
T  5614812 gaccttacatatattatgcattatccatatcaactgagttaagt 5614769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 21922217 - 21922154
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||  |||  |||||||||| ||| | |||||||||||| ||||||||||||    
T  21922217 tgagaaatgatatttgaacatccattttgtgacaacgtttgtgacaactttctctctcatactc 21922154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 189774 - 189712
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||  |||||| ||||||| | |||||||||||| ||||||||||||    
T  189774 gagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactc 189712  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5974232 - 5974282
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagt 51  Q
    |||||| ||||||||||||||||| |||||||  |||| ||||||||||||    
T  5974232 aacctcagaccttgcatatattatgcattatccctatcgactgagttaagt 5974282  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 8920078 - 8920140
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||  |||||||||| ||| | |||||||||||| ||||||||||||    
T  8920078 gagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactc 8920140  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 9893685 - 9893727
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||| |||| |||||||||||||||||||| ||||    
T  9893685 gaccttgcatattttatgcattatctatatcaactgagctaag 9893727  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 12285617 - 12285659
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||    
T  12285617 accttgcatatattatatattgtctttatcaactgagttaagt 12285659  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 18695318 - 18695380
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||| |||||||| | ||| | |||||||||||| ||||||||||||    
T  18695318 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactc 18695380  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 19481253 - 19481191
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  |||  |||||| ||||||| | |||||||||||| ||||||||||||    
T  19481253 gagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactc 19481191  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 27546063 - 27546125
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||||||| ||| ||  | |||||||||||||| ||||||||||    
T  27546063 gagaaatgatatttgaacaatcattttatgacaaattttgtgacaactttatttctcatactc 27546125  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 33645703 - 33645745
Alignment:
Q  8 gaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||||| || ||| |||||||||||||    
T  33645703 gaccttgcatatattatacattgtccataccaactgagttaag 33645745  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 41650949 - 41650995
Alignment:
Q  4 ctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||    
T  41650949 ctcggaccttgcatatattatgcattgtccataccaactgagttaag 41650995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 7846141 - 7846190
Alignment:
Q  11 cttgcatatattatacattatctatatcaactgagttaagtccatgagga 60  Q
    ||||||||| |||||||||||||| ||||||||| ||||||  |||||||    
T  7846141 cttgcatatgttatacattatctaaatcaactgaattaagtttatgagga 7846190  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 12779680 - 12779616
Alignment:
Q  257 tttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    |||||||||||||||||  |||| || ||||||| ||| | | |||||||||||||||||||||||    
T  12779680 tttgagaaatgatatttgtacaaccaatttgtgacaactttt-tgacaactttatctctcatactc 12779616  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17145355 - 17145404
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||| || ||||||||||||||||||| ||| || |||||||||||||    
T  17145355 aacctcagatcttgcatatattatacattgtctttaccaactgagttaag 17145404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35109454 - 35109405
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||||||||  ||| ||| || |||||||||||||    
T  35109454 aacctcggaccttgcatatattatgtattgtctttaccaactgagttaag 35109405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40837910 - 40837971
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggaca 62  Q
    |||| |||||||||||||| ||||| ||| || ||| |||||||||||||| || |||||||    
T  40837910 aaccccggaccttgcatattttatatattgtccataccaactgagttaagttcacgaggaca 40837971  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 7713578 - 7713538
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  7713578 accttgcatatattatgcattattcatatcaactgagttaa 7713538  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 8545001 - 8545045
Alignment:
Q  6 cggaccttgcatatattatacattatctatatcaactgagttaag 50  Q
    ||||||||||||||||||| |||| ||  ||||||||||||||||    
T  8545001 cggaccttgcatatattatgcattgtccttatcaactgagttaag 8545045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 10773623 - 10773659
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgag 45  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  10773623 accttggatatattatgcattatctatatcaactgag 10773659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 13461763 - 13461823
Alignment:
Q  259 tgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcata 319  Q
    |||||||||| ||||  ||||||||||||||||||| |  ||||||| ||| |||||||||    
T  13461763 tgagaaatgaaatttatacaatcattttgtgataactttcgtgacaattttctctctcata 13461823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 18147571 - 18147611
Alignment:
Q  10 ccttgcatatattatacattatctatatcaactgagttaag 50  Q
    |||||||||||||||||||| ||  ||||||||||||||||    
T  18147571 ccttgcatatattatacattgtccttatcaactgagttaag 18147611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 20258591 - 20258551
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||||||||||||| ||||||| ||| ||||||||||||    
T  20258591 accttgcatatattatgcattatccataccaactgagttaa 20258551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 37147037 - 37146993
Alignment:
Q  8 gaccttgcatatatt-atacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||    
T  37147037 gaccttgcatatatttatacattgtttatatcaactgagttaagt 37146993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 38756776 - 38756736
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||| ||||||||||||||||  ||||||||||||||||    
T  38756776 accttgtatatattatacattattcatatcaactgagttaa 38756736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40446037 - 40445989
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaa 49  Q
    |||||| ||||||||||||||||| |||| ||  |||||||||||||||    
T  40446037 aacctcagaccttgcatatattatgcattgtccttatcaactgagttaa 40445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 6591 - 6529
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||||||| | | ||| | |||||||||||||||||||||||||    
T  6591 gagaaatgatatttgaacaatcattttttaacaacttttgtgacaactttatctctcatactc 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 42264 - 42222
Alignment:
Q  9 accttgcatatattatacattatctatatcaactgagttaagt 51  Q
    ||||||||||||||||||||||||| |||||||| | ||||||    
T  42264 accttgcatatattatacattatctctatcaactaaattaagt 42222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 249213 - 249152
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||  ||||||| ||||||||||| | ||| |||||||| ||||||||||||    
T  249213 gagaaatgatatttgcacaatcaatttgtgataacttttgt-acaactttctctctcatactc 249152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 28398 - 28338
Alignment:
Q  260 gagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatac 320  Q
    ||||||||||||||  |||| || ||| ||||||| | |||||||||||| ||||||||||    
T  28398 gagaaatgatatttgaacaaccactttttgataacttttgtgacaactttctctctcatac 28338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45997 - 45933
Alignment:
Q  1 aacctcggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaatt 65  Q
    ||||||||| |||||||||||||||||||||   || |||||||| ||||| || | ||||||||    
T  45997 aacctcggatcttgcatatattatacattattcttaccaactgagctaagttcacggggacaatt 45933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 56832 - 56776
Alignment:
Q  7 ggaccttgcatatattatacattatctatatcaactgagttaagtccatgaggacaa 63  Q
    ||||||||||||||||||||||| || ||| |||||||| ||||  || ||||||||    
T  56832 ggaccttgcatatattatacattgtccataccaactgagctaagctcacgaggacaa 56776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 18593 - 18656
Alignment:
Q  258 ttgagaaatgatattttgacaatcattttgtgataacctatgtgacaactttatctctcatactc 322  Q
    ||||||||||||||||  |||| || ||||||||||| | ||| |||||||| ||||||||||||    
T  18593 ttgagaaatgatatttgtacaaccaatttgtgataacttttgt-acaactttctctctcatactc 18656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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