View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14957_low_22 (Length: 297)
Name: NF14957_low_22
Description: NF14957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14957_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 45449631 - 45449354
Alignment:
| Q |
1 |
ccaacaccactagatcaacttaagtggaaaactagaaaaatattacacttcaaattttatcaattgtgagaaggaagggaaagaaaatatttaaaatttg |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45449631 |
ccaacaccactagatcatcttaagtggaaaactagaaaaatattacacttcaaattttatcaattgtgagaaggaagggaaagaaaatatttaaaatttg |
45449532 |
T |
|
| Q |
101 |
tttagttgatttttgcaaaaggaaggggagtagagcgaacttttctccattcatcattctagctacttgtaccaaccttgaatattgatcaatcataaac |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45449531 |
tttagttgatttttgcaaaaggaaggggaggagagcaaacttttctccattcatcattctagctacttgtaccaaccttgaatattgatcaatcataaac |
45449432 |
T |
|
| Q |
201 |
agatttaaaatatgtgagggaacaagttgaagtaccattttgtgatgatccttatacacaattgtggctccaccactc |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
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| T |
45449431 |
agatttaaaatatgtgagggaacaagttgaagtaccattttgtgatgatccttacacacaattgtggctacaccactc |
45449354 |
T |
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