View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14957_low_32 (Length: 252)
Name: NF14957_low_32
Description: NF14957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14957_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 37649827 - 37650048
Alignment:
| Q |
18 |
atgaacgtcggcttaagctccataacaaaccttttgcaggcattctgcaagtaaggttcaaacctatcatcaacaacacaaaaacaattatcagtatccc |
117 |
Q |
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| T |
37649827 |
atgaacgtcggcttaagctccataacaaaccttttgcaggcattctgcaagtaaggttcaaacctatcatcaacaacacaaaaacaattatcagtatccc |
37649926 |
T |
|
| Q |
118 |
aagataataccaaatattaaggttaccgtaatttcaataaaaatctaaatg-----nnnnnnnnnntacctcaaatattcatcagagatagctttctgaa |
212 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37649927 |
aagataataccaaatattaaggttacggtaatttcaataaaaatctaaatgaaaaaaaaaaaaaaatacctcaaatattcatcagagatagctttctgaa |
37650026 |
T |
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| Q |
213 |
gaacatcgctgaatctaataac |
234 |
Q |
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|||||||||||||||||||||| |
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| T |
37650027 |
gaacatcgctgaatctaataac |
37650048 |
T |
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