View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14958_high_3 (Length: 282)

Name: NF14958_high_3
Description: NF14958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14958_high_3
NF14958_high_3
[»] chr5 (27 HSPs)
chr5 (19-274)||(9603671-9603923)
chr5 (163-268)||(2740273-2740378)
chr5 (165-273)||(16327902-16328010)
chr5 (164-268)||(33149634-33149738)
chr5 (164-269)||(35943887-35943992)
chr5 (164-268)||(28177775-28177879)
chr5 (164-268)||(35785199-35785303)
chr5 (162-268)||(18520880-18520986)
chr5 (162-267)||(13811650-13811755)
chr5 (164-268)||(26720516-26720620)
chr5 (164-268)||(26990265-26990369)
chr5 (162-268)||(36732938-36733044)
chr5 (187-268)||(39557513-39557594)
chr5 (164-264)||(14831814-14831914)
chr5 (160-232)||(15409642-15409714)
chr5 (164-268)||(40145407-40145511)
chr5 (164-268)||(42414298-42414402)
chr5 (163-269)||(2252163-2252269)
chr5 (163-268)||(6679697-6679802)
chr5 (164-268)||(33825320-33825424)
chr5 (162-269)||(3921260-3921367)
chr5 (169-227)||(10356639-10356698)
chr5 (162-269)||(31008986-31009093)
chr5 (161-227)||(39688934-39689000)
chr5 (184-253)||(10227905-10227974)
chr5 (164-269)||(20073511-20073616)
chr5 (218-271)||(25831339-25831392)
[»] chr7 (34 HSPs)
chr7 (163-268)||(36362025-36362130)
chr7 (163-268)||(36361909-36362014)
chr7 (163-268)||(3434561-3434666)
chr7 (164-268)||(19329842-19329946)
chr7 (162-268)||(8080379-8080485)
chr7 (167-268)||(3783998-3784099)
chr7 (161-268)||(7389386-7389493)
chr7 (162-268)||(19436183-19436289)
chr7 (162-268)||(38837215-38837321)
chr7 (162-268)||(40957705-40957811)
chr7 (164-268)||(35137533-35137637)
chr7 (161-269)||(36208170-36208278)
chr7 (167-268)||(3694370-3694471)
chr7 (162-271)||(45223040-45223149)
chr7 (164-268)||(38267040-38267144)
chr7 (162-269)||(35468850-35468957)
chr7 (169-268)||(35522881-35522980)
chr7 (164-271)||(41423682-41423789)
chr7 (163-269)||(22343360-22343466)
chr7 (163-269)||(41915740-41915846)
chr7 (164-268)||(4999510-4999614)
chr7 (195-271)||(16374817-16374893)
chr7 (162-271)||(18207178-18207286)
chr7 (164-233)||(46374833-46374902)
chr7 (162-230)||(10343597-10343665)
chr7 (162-212)||(11044186-11044236)
chr7 (164-229)||(32564461-32564526)
chr7 (164-232)||(21234401-21234469)
chr7 (165-268)||(32951489-32951592)
chr7 (162-229)||(38044195-38044262)
chr7 (164-271)||(39255917-39256023)
chr7 (187-269)||(8238236-8238318)
chr7 (163-233)||(46033832-46033902)
chr7 (164-225)||(40846152-40846213)
[»] chr3 (33 HSPs)
chr3 (162-268)||(49607412-49607518)
chr3 (164-271)||(14623832-14623939)
chr3 (165-271)||(13898048-13898154)
chr3 (162-267)||(27714888-27714993)
chr3 (163-271)||(8956761-8956869)
chr3 (164-268)||(26141528-26141632)
chr3 (164-268)||(53982011-53982115)
chr3 (169-268)||(52629305-52629404)
chr3 (161-268)||(54868891-54868998)
chr3 (164-268)||(33644200-33644304)
chr3 (161-232)||(11095385-11095456)
chr3 (165-268)||(31456690-31456793)
chr3 (163-268)||(17470404-17470509)
chr3 (167-271)||(25407140-25407245)
chr3 (176-268)||(20764911-20765003)
chr3 (161-269)||(33118846-33118954)
chr3 (163-271)||(35536625-35536733)
chr3 (161-233)||(35965805-35965877)
chr3 (168-268)||(48587087-48587187)
chr3 (162-233)||(11347953-11348024)
chr3 (163-269)||(24699949-24700055)
chr3 (164-269)||(8076393-8076498)
chr3 (160-268)||(41189760-41189868)
chr3 (164-233)||(51419391-51419460)
chr3 (176-268)||(39670023-39670115)
chr3 (164-271)||(41080709-41080814)
chr3 (162-232)||(36707456-36707526)
chr3 (163-271)||(21746181-21746284)
chr3 (176-269)||(26754707-26754800)
chr3 (162-267)||(35093583-35093688)
chr3 (164-269)||(45058548-45058652)
chr3 (160-268)||(11907367-11907475)
chr3 (164-268)||(47531865-47531969)
[»] chr8 (29 HSPs)
chr8 (162-271)||(42221513-42221622)
chr8 (164-268)||(1179936-1180040)
chr8 (165-269)||(5957831-5957935)
chr8 (164-268)||(34012292-34012396)
chr8 (163-269)||(37038478-37038584)
chr8 (163-268)||(44507083-44507188)
chr8 (164-268)||(12831047-12831151)
chr8 (164-268)||(15197333-15197437)
chr8 (164-268)||(40423939-40424043)
chr8 (169-232)||(10621119-10621182)
chr8 (161-268)||(14547919-14548026)
chr8 (154-227)||(4854900-4854973)
chr8 (164-268)||(504117-504221)
chr8 (164-268)||(43414577-43414681)
chr8 (162-227)||(24307627-24307692)
chr8 (164-232)||(15048214-15048281)
chr8 (164-268)||(23122593-23122697)
chr8 (161-269)||(24307788-24307896)
chr8 (162-269)||(16056396-16056503)
chr8 (162-269)||(16383375-16383482)
chr8 (162-275)||(10284620-10284733)
chr8 (164-233)||(20074965-20075034)
chr8 (164-272)||(30183867-30183975)
chr8 (162-229)||(34307214-34307281)
chr8 (163-269)||(32032724-32032829)
chr8 (184-269)||(8841427-8841512)
chr8 (218-271)||(42354581-42354634)
chr8 (163-271)||(17443824-17443932)
chr8 (208-268)||(9122229-9122289)
[»] chr6 (21 HSPs)
chr6 (164-271)||(31953023-31953130)
chr6 (162-268)||(23128123-23128229)
chr6 (163-268)||(11427615-11427722)
chr6 (164-268)||(17598554-17598658)
chr6 (162-271)||(12732480-12732589)
chr6 (168-268)||(28536484-28536582)
chr6 (164-268)||(32869678-32869782)
chr6 (169-271)||(9379705-9379807)
chr6 (167-268)||(22880654-22880755)
chr6 (165-230)||(946377-946442)
chr6 (163-268)||(31976247-31976352)
chr6 (161-269)||(15990037-15990145)
chr6 (162-269)||(30341355-30341462)
chr6 (164-269)||(15508019-15508124)
chr6 (164-232)||(31109432-31109500)
chr6 (162-232)||(31110793-31110861)
chr6 (162-268)||(6209461-6209567)
chr6 (180-269)||(4231564-4231653)
chr6 (162-246)||(15832575-15832659)
chr6 (164-268)||(29857827-29857931)
chr6 (163-229)||(22422053-22422119)
[»] chr4 (30 HSPs)
chr4 (162-269)||(50052423-50052530)
chr4 (162-268)||(480443-480549)
chr4 (164-268)||(6034044-6034148)
chr4 (161-268)||(48183045-48183152)
chr4 (162-268)||(42044363-42044469)
chr4 (164-269)||(50526166-50526271)
chr4 (164-268)||(11511458-11511562)
chr4 (162-269)||(29239884-29239991)
chr4 (164-231)||(40574779-40574846)
chr4 (161-247)||(29547976-29548062)
chr4 (161-271)||(29977882-29977992)
chr4 (164-269)||(3481654-3481759)
chr4 (163-268)||(29234241-29234346)
chr4 (164-268)||(41236347-41236451)
chr4 (161-268)||(23608232-23608339)
chr4 (164-229)||(8343198-8343263)
chr4 (161-229)||(55475188-55475256)
chr4 (162-268)||(24995103-24995209)
chr4 (161-271)||(47104541-47104651)
chr4 (163-269)||(47986207-47986313)
chr4 (163-269)||(50813887-50813993)
chr4 (164-268)||(54473529-54473633)
chr4 (162-269)||(19670711-19670818)
chr4 (164-230)||(31910192-31910258)
chr4 (184-269)||(17983738-17983823)
chr4 (208-271)||(18769040-18769103)
chr4 (169-268)||(53352562-53352660)
chr4 (214-271)||(28480261-28480318)
chr4 (214-271)||(28481136-28481193)
chr4 (214-271)||(28482011-28482068)
[»] chr2 (33 HSPs)
chr2 (161-268)||(9058477-9058584)
chr2 (163-268)||(7465731-7465836)
chr2 (164-268)||(13438343-13438447)
chr2 (164-268)||(17473020-17473124)
chr2 (162-269)||(20700813-20700920)
chr2 (162-269)||(33436095-33436202)
chr2 (162-268)||(30915461-30915567)
chr2 (163-268)||(5574484-5574589)
chr2 (167-268)||(19930816-19930917)
chr2 (167-268)||(28863458-28863559)
chr2 (164-268)||(40613898-40614002)
chr2 (164-268)||(40701478-40701582)
chr2 (161-268)||(10249378-10249485)
chr2 (165-271)||(41575138-41575245)
chr2 (164-269)||(27864704-27864809)
chr2 (163-243)||(33436210-33436290)
chr2 (162-269)||(45097730-45097837)
chr2 (162-268)||(42257191-42257297)
chr2 (163-232)||(2533123-2533191)
chr2 (161-271)||(17823781-17823895)
chr2 (163-264)||(32505648-32505749)
chr2 (164-271)||(17819997-17820104)
chr2 (152-269)||(26891499-26891616)
chr2 (164-269)||(38732354-38732459)
chr2 (164-232)||(28381687-28381755)
chr2 (162-232)||(38273174-38273244)
chr2 (162-232)||(38882846-38882915)
chr2 (184-269)||(2997482-2997567)
chr2 (164-232)||(4060685-4060753)
chr2 (163-233)||(36168835-36168905)
chr2 (184-269)||(13365373-13365458)
chr2 (164-229)||(43490121-43490186)
chr2 (177-269)||(3439992-3440084)
[»] chr1 (29 HSPs)
chr1 (164-268)||(27564731-27564835)
chr1 (164-268)||(47452316-47452420)
chr1 (163-269)||(51898678-51898784)
chr1 (164-268)||(3000319-3000423)
chr1 (164-268)||(9474872-9474976)
chr1 (164-271)||(3302526-3302633)
chr1 (162-264)||(2581913-2582015)
chr1 (162-268)||(32813245-32813351)
chr1 (162-268)||(38595152-38595258)
chr1 (163-268)||(50630457-50630562)
chr1 (164-268)||(37649198-37649302)
chr1 (164-269)||(41608488-41608593)
chr1 (167-268)||(44548372-44548473)
chr1 (164-268)||(43132-43236)
chr1 (164-268)||(48716278-48716382)
chr1 (162-268)||(8346384-8346490)
chr1 (162-268)||(38632317-38632423)
chr1 (163-268)||(37926434-37926539)
chr1 (164-269)||(50590995-50591100)
chr1 (169-269)||(44453984-44454084)
chr1 (162-269)||(5958995-5959102)
chr1 (162-233)||(23597122-23597193)
chr1 (161-232)||(49811559-49811630)
chr1 (163-233)||(7740732-7740802)
chr1 (171-268)||(26440741-26440838)
chr1 (163-268)||(41758804-41758909)
chr1 (195-268)||(13414792-13414865)
chr1 (161-230)||(26274429-26274498)
chr1 (165-269)||(11152373-11152476)
[»] scaffold0321 (1 HSPs)
scaffold0321 (162-268)||(10105-10211)
[»] scaffold1268 (1 HSPs)
scaffold1268 (164-269)||(924-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (164-269)||(924-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (184-269)||(152518-152603)
[»] scaffold0237 (1 HSPs)
scaffold0237 (164-268)||(4029-4133)
[»] scaffold0110 (1 HSPs)
scaffold0110 (164-269)||(8858-8963)


Alignment Details
Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 9603671 - 9603923
Alignment:
Q  19 cacatgtaatcagaggtacattattaatcttttataaaataaattaacatattttccaatgccctaacccttagggcaaat-ttagcatttcccataaat 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9603671 cacatgtaatcagaggtacattattaatcttttgtaaaataaattaacatattttccaatgccctaacccttagggcaaatgttagcatttcccataaat 9603770  T
Q  118 ataaattataaagtcacaatacctgtgttagcattatattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacac 217  Q
    ||| ||||||||||||||||| |||||||||||||||||    |||||||||||||| ||| ||||||||||||| |||||||  |||| ||||||||||    
T  9603771 atagattataaagtcacaatatctgtgttagcattatat----taagagtaatgatacatatacatccttaggtgataatacactcattcacacctacac 9603866  T
Q  218 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttc 274  Q
    ||||||||||||| || |||| |||| ||||||||||||||||||||||||||||||    
T  9603867 aaaaatctgacacatggtcatatggaccccatacaatcacactttctctttcatttc 9603923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 2740273 - 2740378
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  263 ctcttt 268  Q
    ||||||    
T  2740373 ctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 165 - 273
Target Start/End: Original strand, 16327902 - 16328010
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 264  Q
    |||||||||| ||| | |||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||| | | || |||| |||||||| |    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacacttttt 16328001  T
Q  265 ctttcattt 273  Q
    |||||||||    
T  16328002 ctttcattt 16328010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 33149738 - 33149634
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  |||| |||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  264 tcttt 268  Q
    |||||    
T  33149638 tcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 35943992 - 35943887
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  | | |||||||||| |||| |||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  264 tctttc 269  Q
    ||||||    
T  35943892 tctttc 35943887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 28177775 - 28177879
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||| |||  |||| |||  |||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  264 tcttt 268  Q
    |||||    
T  28177875 tcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 35785199 - 35785303
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | |||||||||  ||||||||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  264 tcttt 268  Q
    |||||    
T  35785299 tcttt 35785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 18520986 - 18520880
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||| |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  18520986 aagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 18520887  T
Q  262 tctcttt 268  Q
    |||||||    
T  18520886 tctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 13811650 - 13811755
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||||| |||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13811749  T
Q  262 tctctt 267  Q
    ||||||    
T  13811750 tctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 26720516 - 26720620
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||||||||  ||  ||||||||  |||| |||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  264 tcttt 268  Q
    |||||    
T  26720616 tcttt 26720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 26990265 - 26990369
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||||||||  ||  ||||||||  |||| |||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  264 tcttt 268  Q
    |||||    
T  26990365 tcttt 26990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 36733044 - 36732938
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||| | |||||| || |||||||| ||||||||||||||||| |  ||| ||||| |||  |||| |||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  262 tctcttt 268  Q
    |||||||    
T  36732944 tctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 39557594 - 39557513
Alignment:
Q  187 taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||||||||||| |  || ||| | ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttt 39557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||  ||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| |||||||||  |||| |||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  264 t 264  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 15409714 - 15409642
Alignment:
Q  160 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||||||| |||||| |||||||||||||||||  ||||||| | |||||||| |||||||||||||||||||    
T  15409714 gtaagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgt 15409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 40145407 - 40145511
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| || || ||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  264 tcttt 268  Q
    |||||    
T  40145507 tcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 42414402 - 42414298
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |  ||||||| |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  264 tcttt 268  Q
    |||||    
T  42414302 tcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 2252269 - 2252163
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||| |||||||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  263 ctctttc 269  Q
    |||||||    
T  2252169 ctctttc 2252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 6679697 - 6679802
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||||||||| |||||||| |||||| |  |||||||| |||||||||||||||||||| |||  |||| |||  |||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  263 ctcttt 268  Q
    ||||||    
T  6679797 ctcttt 6679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 33825424 - 33825320
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||  |||||||| ||||||||| ||||||  | |||||||| ||| |||||||||||||||| ||||||| | |  | |||| |||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  264 tcttt 268  Q
    |||||    
T  33825324 tcttt 33825320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 3921367 - 3921260
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 3921268  T
Q  262 tctctttc 269  Q
    ||||||||    
T  3921267 tctctttc 3921260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacat-ccattgacacctacacaaaaatctga 227  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 31008986 - 31009093
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| |||||||||||||  ||||||| | |  ||||| |||||||||||||||||||  ||| |||||||||  |||| |||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 31009085  T
Q  262 tctctttc 269  Q
    ||| ||||    
T  31009086 tctatttc 31009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 39689000 - 39688934
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 227  Q
    ||||||| |||||| ||| ||| ||||| |||| ||||||||| |||||||| ||||||||||||||    
T  39689000 taagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 10227974 - 10227905
Alignment:
Q  184 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaa 253  Q
    ||||| |||| ||||||||| |||||||| | |||||||||||||| ||||| |||||||| ||| ||||    
T  10227974 ccttatgtggcaatacatcccttgacaccgatacaaaaatctgacatgtgattatgtggattccacacaa 10227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 20073616 - 20073511
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||||||||||||| |||| ||  |||||| || |||||||  ||| ||||||||  ||||||| || ||||| ||   |||| |||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  264 tctttc 269  Q
    | ||||    
T  20073516 tatttc 20073511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 25831339 - 25831392
Alignment:
Q  218 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    |||||||| ||||||| ||||||||| |||| |||| |||| ||||||||||||    
T  25831339 aaaaatctaacacgtggtcatgtggaccccacacaaacacattttctctttcat 25831392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 36362025 - 36362130
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  263 ctcttt 268  Q
    ||||||    
T  36362125 ctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 36362014 - 36361909
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  263 ctcttt 268  Q
    ||||||    
T  36361914 ctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 3434561 - 3434666
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| |||||||||||||||||| |||||| || |||||||| ||||||||| |||||||||  ||| |||||||||  |||| ||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  263 ctcttt 268  Q
    ||||||    
T  3434661 ctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 19329842 - 19329946
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||||| |||| ||||| |||  |||| |||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  264 tcttt 268  Q
    |||||    
T  19329942 tcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 8080485 - 8080379
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||||||| |||||||||||||||  ||| ||||| |||  |||| |||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  262 tctcttt 268  Q
    |||||||    
T  8080385 tctcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 3783998 - 3784099
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 266  Q
    |||||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  267 tt 268  Q
    ||    
T  3784098 tt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 7389386 - 7389493
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||| ||||||| |||||||||| ||||||  | |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  7389386 taagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 7389485  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  7389486 ttctcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 19436289 - 19436183
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| |||||||||||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| |||||||||  | || |||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  262 tctcttt 268  Q
    |||||||    
T  19436189 tctcttt 19436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 38837215 - 38837321
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |  |||||||||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38837314  T
Q  262 tctcttt 268  Q
    |||||||    
T  38837315 tctcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 40957705 - 40957811
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| |||||||  ||||||||| ||||||  | |||| ||| |||||||||||||||||||  ||| ||||||||| ||||| |||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactt 40957804  T
Q  262 tctcttt 268  Q
    |||||||    
T  40957805 tctcttt 40957811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 35137533 - 35137637
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  264 tcttt 268  Q
    |||||    
T  35137633 tcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 36208170 - 36208278
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    ||||||| |||||| ||||||| |||||||||||||||||| |||||||||| ||||||||| |||||| ||| ||| ||||| ||   |||| |||| |    
T  36208170 taagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacatt 36208269  T
Q  261 ttctctttc 269  Q
    |||||||||    
T  36208270 ttctctttc 36208278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 3694370 - 3694471
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 266  Q
    |||||||||||| ||| |||||||||  |||||| |  || ||||| |||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T
Q  267 tt 268  Q
    ||    
T  3694470 tt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 45223040 - 45223149
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||||||| |||||||||||||| ||||||| | |  ||| ||||||||||||||||||||| ||||| |  | | ||||||| | || ||    
T  45223040 aagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatattaacctcatacaagcgcattt 45223139  T
Q  262 tctctttcat 271  Q
    ||||||||||    
T  45223140 tctctttcat 45223149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 38267040 - 38267144
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||| |||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  264 tcttt 268  Q
    |||||    
T  38267140 tcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 35468957 - 35468850
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| |||||||||||||| ||| ||||||||  |||||||| ||| |||||||| | | |||| |||||||| ||   |||| |||||||    
T  35468957 aagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactt 35468858  T
Q  262 tctctttc 269  Q
    ||||||||    
T  35468857 tctctttc 35468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 35522881 - 35522980
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||| ||||||||||||| |||| |||||| |  || ||||| ||||||||||||||||||||  ||| ||||||||  |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 41423682 - 41423789
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||||||||| |||| |||||||||| |  ||||||| ||||||||||||||||| ||| ||| || |||||| ||||| || | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  264 tctttcat 271  Q
    ||||||||    
T  41423782 tctttcat 41423789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 22343360 - 22343466
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||| ||| |||| |||  ||||  |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  263 ctctttc 269  Q
    |||||||    
T  22343460 ctctttc 22343466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 41915740 - 41915846
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || ||||||||||||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  263 ctctttc 269  Q
    |||||||    
T  41915840 ctctttc 41915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 4999614 - 4999510
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||| ||| |||||| |  |||||||| |||||||||||||| ||||  ||| ||||| |||  |||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  264 tcttt 268  Q
    |||||    
T  4999514 tcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 16374893 - 16374817
Alignment:
Q  195 aatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    ||||||||| |||||| | |||||||||||||||||||| ||| ||||||| || |||| ||||| |||||||||||    
T  16374893 aatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcat 16374817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 18207178 - 18207286
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||||||| |||||||||| |||||| |  |||||||| | |||||||||| |||||||  || ||| | |||| |||| |||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactt 18207276  T
Q  262 tctctttcat 271  Q
    ||||||||||    
T  18207277 tctctttcat 18207286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 46374902 - 46374833
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    |||| |||||| |||||||||||||||||| || ||| || || ||||| ||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtg 46374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 230  Q
    ||||||||||||| ||||||| |||||||||| ||||||    |||||||| |||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 11044186 - 11044236
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacc 212  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| ||||||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaatacatcctttgacacc 11044236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    |||| |||||| ||| |||| ||||||||| |||||| || |||||||| ||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 21234401 - 21234469
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||| |||||| |||||||||||||||||  |||||| || |||||||  |||||||||| ||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgt 21234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 32951592 - 32951489
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 264  Q
    |||||||||| |||||||  ||||| ||  ||||||||| || ||| | |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  265 cttt 268  Q
    ||||    
T  32951492 cttt 32951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 38044195 - 38044262
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||| | ||||||||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgaca 38044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 39256023 - 39255917
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||||||| |||||||||| |||||| |  |||| ||| | ||||||||||||||||||  || |||||  ||| ||||  ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtg-gcacgtggactccacacaagaacactttc 39255925  T
Q  264 tctttcat 271  Q
    ||||||||    
T  39255924 tctttcat 39255917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 8238236 - 8238318
Alignment:
Q  187 taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    ||||||| |||||| || |||||||| |||||||||||||||| ||  |||| |||| |||  ||||  ||||||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttc 8238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 46033902 - 46033832
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    ||||| |||||| ||||| || ||||||||| |||||| || || ||||| ||| ||||||||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 46033832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 40846213 - 40846152
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatct 225  Q
    |||| |||||| ||| |||||||||||||| |||||| || |||||| | ||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatct 40846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 49607412 - 49607518
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||| |||| |||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 49607511  T
Q  262 tctcttt 268  Q
    |||||||    
T  49607512 tctcttt 49607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 14623939 - 14623832
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||||||||||||| |||||| || |||||||| ||| |||||||||||| ||| ||||||||| | || |||| |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  264 tctttcat 271  Q
    ||||||||    
T  14623839 tctttcat 14623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 13898154 - 13898048
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 264  Q
    |||||||||| ||| |||||||||||||| |||||| || |||||||| ||| |||||||||||||||| ||||||||| | || |||| ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  265 ctttcat 271  Q
    |||||||    
T  13898054 ctttcat 13898048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 27714993 - 27714888
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| | ||||||||||||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| |||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  262 tctctt 267  Q
    ||||||    
T  27714893 tctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 8956761 - 8956869
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||||||||| |||| ||||||||| |||||||| ||| |||||| ||||||||| ||||||||| |  | |||| |||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  263 ctctttcat 271  Q
    |||||||||    
T  8956861 ctctttcat 8956869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 26141632 - 26141528
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||||||| |||||| || || ||||| |||||||||||||||||||| |||  |||| |||| |||| |||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  264 tcttt 268  Q
    |||||    
T  26141532 tcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 53982011 - 53982115
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  264 tcttt 268  Q
    |||||    
T  53982111 tcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 52629305 - 52629404
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 54868998 - 54868891
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | ||||| |||  |||||||||||    
T  54868998 taagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 54868899  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  54868898 ttctcttt 54868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 33644200 - 33644304
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||| ||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  264 tcttt 268  Q
    |||||    
T  33644300 tcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 11095456 - 11095385
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||    
T  11095456 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 31456690 - 31456793
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 264  Q
    |||||||||| ||||||| || |||| || |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  265 cttt 268  Q
    ||||    
T  31456790 cttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 17470404 - 17470509
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| | |||||||| |||||| |  || ||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  263 ctcttt 268  Q
    ||||||    
T  17470504 ctcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 271
Target Start/End: Complemental strand, 25407245 - 25407140
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaa-tctgacacgtgatcatgtggatcccatacaatcacactttctc 265  Q
    |||||||| ||| ||| || ||||||| |||| | || |||||||  ||||||||| |||||||||||||||| ||||||||| |||| |||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  266 tttcat 271  Q
    ||||||    
T  25407145 tttcat 25407140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 20765003 - 20764911
Alignment:
Q  176 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||||||||||||||||||||||  | || ||||| ||||||||||||||||||||  ||  |||| ||| ||||| ||||||||||||||    
T  20765003 atagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 33118954 - 33118846
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    ||||||| |||||| ||||||| |||||||||  |||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  | || ||||||    
T  33118954 taagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacact 33118855  T
Q  261 ttctctttc 269  Q
    |||||||||    
T  33118854 ttctctttc 33118846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 35536625 - 35536733
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||||||||| |||| |||||| |  |||||||| ||| |||||| ||||||||| ||||||||| |  | |||| |||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  263 ctctttcat 271  Q
    |||||||||    
T  35536725 ctctttcat 35536733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 35965877 - 35965805
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    |||||||||||||| ||| ||||||||| ||| |||||||||| |||||||| ||| ||||||||||||||||    
T  35965877 taagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtg 35965805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 48587187 - 48587087
Alignment:
Q  168 aatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 267  Q
    ||||||| ||||| | |||||||||| |||||| || |||||||||||| |||||||||||||||  ||| |||||||||  ||||  ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  268 t 268  Q
    |    
T  48587087 t 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 11348024 - 11347953
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    |||||| |||||| |||||||||||||||||  ||||||||| |||||| | ||||||||||||||||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtg 11347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 24700055 - 24699949
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| |||||||||||||| ||| |||||| |  |||||||| ||| ||||||||| ||||||  || ||||| ||  ||||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  263 ctctttc 269  Q
    |||||||    
T  24699955 ctctttc 24699949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 8076393 - 8076498
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||| ||| |||||||||| | |||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  264 tctttc 269  Q
    ||||||    
T  8076493 tctttc 8076498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 41189868 - 41189760
Alignment:
Q  160 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacac 259  Q
    |||||||| |||||| ||| |||||||||||||| ||||||||  |||||||| ||| |||||| |||||||||  ||  |||| |||  |||| |||||    
T  41189868 gtaagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacac 41189769  T
Q  260 tttctcttt 268  Q
    |||||||||    
T  41189768 tttctcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 51419460 - 51419391
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    |||| |||||| |||||||||||||| ||  ||||||||| || ||||| ||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtg 51419391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 39670023 - 39670115
Alignment:
Q  176 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    ||||||||||||| |||| |||| |||| |||||| ||| | |||||| ||||||||||||||||||| | | ||||  ||||||| ||||||    
T  39670023 atagacatccttatgtggcaatatatcccttgacatctatataaaaatttgacacgtgatcatgtggacctcgtacacgcacacttcctcttt 39670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 41080709 - 41080814
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||||||||| || | || ||| || |||||||| || ||||||||||| | ||| ||||||||| |||| |||| |||| ||||    
T  41080709 gagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  264 tctttcat 271  Q
    ||||||||    
T  41080807 tctttcat 41080814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 36707526 - 36707456
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||||||||||| ||||| | |||||||||  |||||| || |||||| | |||||||||||||||||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 21746284 - 21746181
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgaca--cctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||| ||| |||||||||||||| ||||||| | | ||||  || ||||||||||||||||||| |       || ||||||||| ||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgtaa-------gaccccatacaagcacact 21746192  T
Q  261 ttctctttcat 271  Q
    |||||||||||    
T  21746191 ttctctttcat 21746181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 26754707 - 26754800
Alignment:
Q  176 atagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    ||||||| |||||||||| |||||| || | |||| | |||||||||||||||| ||| |||  |||| |||  |||| |||| ||||||||||    
T  26754707 atagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttc 26754800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 35093583 - 35093688
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| | |||| ||||||| | |||||||  |||||| |  |||||| | || ||||||||||||| ||| ||||||| |  |||||||| |||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  262 tctctt 267  Q
    ||||||    
T  35093683 tctctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 45058652 - 45058548
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| ||| |||||||||||| |||| ||| |||| |||  ||||  | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  264 tctttc 269  Q
    ||||||    
T  45058553 tctttc 45058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 268
Target Start/End: Original strand, 11907367 - 11907475
Alignment:
Q  160 gtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacac 259  Q
    |||||||| |||||| ||||||| |||||||||  ||||||  | |  ||||  |||||||||||||||| ||| |||| |||| |||  |||| ||||     
T  11907367 gtaagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacat 11907466  T
Q  260 tttctcttt 268  Q
    |||||||||    
T  11907467 tttctcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||| ||| |||||| |  || ||| | |||||| |||||||||||||  ||| || | |||  |||| |||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  264 tcttt 268  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 42221513 - 42221622
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||| |||||||||||||  ||||||| | | |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  262 tctctttcat 271  Q
    ||||||||||    
T  42221613 tctctttcat 42221622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||  |||||||||| ||  |||| |||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  264 tcttt 268  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 5957831 - 5957935
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 264  Q
    |||||||||| |||||||| ||||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||||||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  265 ctttc 269  Q
    |||||    
T  5957931 ctttc 5957935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 34012396 - 34012292
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||| ||||||||  ||| |||||||||  |||| |||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  264 tcttt 268  Q
    |||||    
T  34012296 tcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 37038478 - 37038584
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  263 ctctttc 269  Q
    || ||||    
T  37038578 ctatttc 37038584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 44507188 - 44507083
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| |||||||||||||||||  | || ||||| |||||||||||||||||||  ||| ||||| ||| ||||| || |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  263 ctcttt 268  Q
    ||||||    
T  44507088 ctcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  264 tcttt 268  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 15197333 - 15197437
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||  ||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  264 tcttt 268  Q
    |||||    
T  15197433 tcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 40424043 - 40423939
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||| | |||||||||| |||||| || |||||| | |||||||||||||||||||  ||||||||| |||  |||| |||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  264 tcttt 268  Q
    |||||    
T  40423943 tcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 10621182 - 10621119
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgt 10621119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 14547919 - 14548026
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    ||||||||| |||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  14547919 taagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 14548018  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  14548019 ttctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 4854973 - 4854900
Alignment:
Q  154 tattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 227  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||| || || ||||||||| ||||||||||    
T  4854973 tatttagtaagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 504221 - 504117
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  264 tcttt 268  Q
    |||||    
T  504121 tcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 43414681 - 43414577
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||| ||| || ||| || |||||||| |||||||||||| ||||||| |||  ||||||||  |||| |||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  264 tcttt 268  Q
    |||||    
T  43414581 tcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctga 227  Q
    |||||| |||||| ||| ||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 15048281 - 15048214
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgt 15048214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 23122697 - 23122593
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||| |||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  | || |||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  264 tcttt 268  Q
    |||||    
T  23122597 tcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 24307896 - 24307788
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    ||||||| |||||| ||| ||| |||||||||| ||||||||| |||||||| |||||||||||||| | |||  ||| |||| |||  ||||  |||||    
T  24307896 taagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacact 24307797  T
Q  261 ttctctttc 269  Q
    |||||||||    
T  24307796 ttctctttc 24307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 16056503 - 16056396
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| ||||||||| |||  ||||||||| |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16056404  T
Q  262 tctctttc 269  Q
    ||||||||    
T  16056403 tctctttc 16056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 16383375 - 16383482
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16383474  T
Q  262 tctctttc 269  Q
    ||||||||    
T  16383475 tctctttc 16383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 275
Target Start/End: Complemental strand, 10284733 - 10284620
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||||||| ||||| |||  ||||||  | |||||||| |||||||||| ||||||||  ||| ||||| |||  |||| |||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactt 10284634  T
Q  262 tctctttcatttca 275  Q
    |||||||| |||||    
T  10284633 tctctttcctttca 10284620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 20075034 - 20074965
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    ||||||||||| |||||||||||||||||| ||||||  | |||||||| ||| |||||| |||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtg 20074965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 30183975 - 30183867
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||| ||||||||| |||| ||||||| | | |||||  | |||||||||||| |||| ||||| ||||   |||| || |||||||||    
T  30183975 gagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctgatacgtaatcatatggacttcatataagcacactttc 30183876  T
Q  264 tctttcatt 272  Q
    |||||||||    
T  30183875 tctttcatt 30183867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| ||||||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 32032724 - 32032829
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||| ||| |||||||||| ||||||||| |||||| | |||||||||||||||| |||  ||| |||||||   ||||  |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  263 ctctttc 269  Q
    |||||||    
T  32032823 ctctttc 32032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 8841512 - 8841427
Alignment:
Q  184 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    |||||||||| | |||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttc 8841427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 42354634 - 42354581
Alignment:
Q  218 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    |||||||||||||||| ||||||||||| || | || |||||||||||||||||    
T  42354634 aaaaatctgacacgtgttcatgtggatctcacataagcacactttctctttcat 42354581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 17443824 - 17443932
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||||||| |||||||||  ||||||    || ||||  |||||||||||||||| ||  ||||||||| |||| ||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  263 ctctttcat 271  Q
    |||||||||    
T  17443924 ctctttcat 17443932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 9122229 - 9122289
Alignment:
Q  208 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    ||||| |||||||||||||||| ||  ||| |||||||||  |||| ||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 31953130 - 31953023
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||||||||||||| |||||| || |||||||| ||| |||||||||||| ||| ||||||||| | || |||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  264 tctttcat 271  Q
    ||||||||    
T  31953030 tctttcat 31953023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 23128229 - 23128123
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||| |||||||||||||||| | ||| ||| |||||||||| |||||||| |||||||||||||||||||  ||| |||||||||| |||| |||||||    
T  23128229 aagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 23128130  T
Q  262 tctcttt 268  Q
    |||||||    
T  23128129 tctcttt 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 11427615 - 11427722
Alignment:
Q  163 agagtaatgatatatagacatcct--taggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||| ||||||| |||  ||||||| ||||||||| |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  11427715 ttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 17598554 - 17598658
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| ||||||||  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  264 tcttt 268  Q
    |||||    
T  17598654 tcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 12732480 - 12732589
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| |||||||| |||| |||| |||| |  |||||||||| ||||||||||||||||||||   |||||||||||| | || |||| ||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattt 12732579  T
Q  262 tctctttcat 271  Q
    ||||||||||    
T  12732580 tctctttcat 12732589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 28536582 - 28536484
Alignment:
Q  168 aatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 267  Q
    ||||||| ||| |||||||||||||| |||||| || |||||||| |||||||||||||||||  | ||||||||| |||| |||| |||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 32869678 - 32869782
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||||| |||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  264 tcttt 268  Q
    |||||    
T  32869778 tcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 9379807 - 9379705
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||| |||||||||||||| ||  ||||||||| |||||||| | |||||||| |||||||||  |||||||||| || |||| |||| |||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T
Q  269 cat 271  Q
    |||    
T  9379707 cat 9379705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 22880755 - 22880654
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 266  Q
    |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||| ||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  267 tt 268  Q
    ||    
T  22880655 tt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 946377 - 946442
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 230  Q
    ||||| |||| ||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 31976247 - 31976352
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| |||||||||||||||||| |||| | || || ||||| |||||||||||||||||||| |||  || | |||  |||| ||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  263 ctcttt 268  Q
    ||||||    
T  31976347 ctcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 15990145 - 15990037
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    ||||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||    
T  15990145 taagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 15990046  T
Q  261 ttctctttc 269  Q
    |||||||||    
T  15990045 ttctctttc 15990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 30341462 - 30341355
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 30341363  T
Q  262 tctctttc 269  Q
    ||||||||    
T  30341362 tctctttc 30341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 15508124 - 15508019
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  264 tctttc 269  Q
    ||||||    
T  15508024 tctttc 15508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||||||||  ||||||| |||||||||| |||||| || |||||| | |||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 31110861 - 31110793
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||||| |||||| |||||||||||||||||| |||||| || |||||||   ||||||||||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacac--tcacaaaaatctgacacgt 31110793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 6209567 - 6209461
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| ||||||    |||||||  ||||||||||||| |||||  ||| ||||| |||  || | |||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactt 6209468  T
Q  262 tctcttt 268  Q
    |||||||    
T  6209467 tctcttt 6209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 4231564 - 4231653
Alignment:
Q  180 acatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    ||||| |||||||| |||||| || ||| |||| ||||||||||||||||||||  ||| |||| |||  ||||  ||||||||||||||    
T  4231564 acatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttc 4231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 15832575 - 15832659
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcc 246  Q
    ||||||||||||| ||||||| | |||||||  |||| |||  |||||||| |||||||||| ||||||||  ||| ||||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcc 15832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 29857827 - 29857931
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| | |||| ||| |||||| |  || ||||| |||||||||||||||||||  | | |||||||||  | || |||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  264 tcttt 268  Q
    |||||    
T  29857927 tcttt 29857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    |||||||||||| |||||||||||||||||| |||| |||  |||||||  | |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 50052530 - 50052423
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 50052431  T
Q  262 tctctttc 269  Q
    ||||||||    
T  50052430 tctctttc 50052423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 480549 - 480443
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||  |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 480450  T
Q  262 tctcttt 268  Q
    |||||||    
T  480449 tctcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 6034044 - 6034148
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||| ||  ||| |||||||||  |||| |||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  264 tcttt 268  Q
    |||||    
T  6034144 tcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 48183152 - 48183045
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||| ||||||| ||||| |||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  48183152 taagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48183053  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  48183052 ttctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 42044469 - 42044363
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| |  ||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 42044370  T
Q  262 tctcttt 268  Q
    |||||||    
T  42044369 tctcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 50526271 - 50526166
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||| ||| |||||| ||  |||| ||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  264 tctttc 269  Q
    | ||||    
T  50526171 tatttc 50526166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 11511562 - 11511458
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  264 tcttt 268  Q
    |||||    
T  11511462 tcttt 11511458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 29239884 - 29239991
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||| ||||||  ||| ||||| |||| |||| |||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactt 29239983  T
Q  262 tctctttc 269  Q
    ||||||||    
T  29239984 tctctttc 29239991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacg 231  Q
    |||| |||||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 29548062 - 29547976
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatccc 247  Q
    ||||||| |||||| ||| |||||||||||||| ||||||||| |||||||| |||||||||||||||| |||  ||| ||||||||    
T  29548062 taagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatccc 29547976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 29977882 - 29977992
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||| ||| | | || ||||||| |||||| || || ||||| |||||||||||||||||||  |||| |||| |||| |||| ||||||    
T  29977882 taagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacact 29977981  T
Q  261 ttctctttcat 271  Q
    |||||||||||    
T  29977982 ttctctttcat 29977992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 3481654 - 3481759
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| | |||||||| ||||||  | |||||||| ||||||||||||||||| |  ||| ||||| |||| |||| |||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  264 tctttc 269  Q
    ||||||    
T  3481754 tctttc 3481759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 29234346 - 29234241
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| |||||| ||| |||||| || |||| |||| ||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  263 ctcttt 268  Q
    ||||||    
T  29234246 ctcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  264 tcttt 268  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 23608232 - 23608339
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||||||||||| |||||| ||  |||||| |  |||||||| |||||||||||||||||||  ||| ||| |  ||| |||| ||||||    
T  23608232 taagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacact 23608331  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  23608332 ttctcttt 23608339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    |||| |||||| ||| |||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 55475188 - 55475256
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    ||||||| |||||| ||| |||||||||||||| |||||| || |||||||| ||||||||||||||||    
T  55475188 taagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 24995209 - 24995103
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||||||||||||| |||| |||||| ||| |||||| || |||||||| ||| |||||| ||||||||  ||| ||||| |||  |||| |||| ||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  262 tctcttt 268  Q
    |||||||    
T  24995109 tctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 47104541 - 47104651
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    ||||||||||||||||||||||| ||||| ||  ||||||  |  ||||||| |||||||||| ||||||||| |  | | || |||| |||| ||||||    
T  47104541 taagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacact 47104640  T
Q  261 ttctctttcat 271  Q
    |||||||||||    
T  47104641 ttctctttcat 47104651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 47986207 - 47986313
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||| ||| |||||||||| ||||||||| |||||| | |||||||||||||||| |||  ||| |||| |||  ||||  |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  263 ctctttc 269  Q
    |||||||    
T  47986307 ctctttc 47986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 50813993 - 50813887
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||| |||  |||||||||||||||| || |||||||| |||||||||||||||| ||| |||| || | |||  ||||  |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  263 ctctttc 269  Q
    |||||||    
T  50813893 ctctttc 50813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 54473633 - 54473529
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  264 tcttt 268  Q
    |||||    
T  54473533 tcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 19670818 - 19670711
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| ||| |||||||||| |||||| || |||||||  |||||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 19670719  T
Q  262 tctctttc 269  Q
    ||||||||    
T  19670718 tctctttc 19670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 31910192 - 31910258
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 230  Q
    |||| |||||| |||||||||||||||||  ||||||  | |||||||| |||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 17983823 - 17983738
Alignment:
Q  184 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 17983738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 18769103 - 18769040
Alignment:
Q  208 acacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    ||||| |||||||||||||||| ||| ||||||  |||||| |||| |||| ||||||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcat 18769040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 53352660 - 53352562
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||| ||||||| |||||||||  ||||||| | || |||||||||||||||||||||||||  | | ||||| |||  |||| || |||||||||||    
T  53352660 atgatacatagacacccttaggtgc-aatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 28480318 - 28480261
Alignment:
Q  214 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| |||||    
T  28480318 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcat 28480261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 28481193 - 28481136
Alignment:
Q  214 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| |||||    
T  28481193 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcat 28481136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 28482068 - 28482011
Alignment:
Q  214 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 271  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| |||||    
T  28482068 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcat 28482011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 268
Target Start/End: Original strand, 9058477 - 9058584
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||||||||| |||  |||| ||||||    
T  9058477 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 9058576  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  9058577 ttctcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 7465836 - 7465731
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| |||||| ||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  263 ctcttt 268  Q
    ||||||    
T  7465736 ctcttt 7465731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 13438343 - 13438447
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||  ||||||||| |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  264 tcttt 268  Q
    |||||    
T  13438443 tcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||| ||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| |||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  264 tcttt 268  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 20700813 - 20700920
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||||||||| |||| |||||| || ||||| ||||||||||||||||||||||  ||| ||||| |||  | || |||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 20700912  T
Q  262 tctctttc 269  Q
    ||||||||    
T  20700913 tctctttc 20700920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 33436202 - 33436095
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactt 33436103  T
Q  262 tctctttc 269  Q
    ||||||||    
T  33436102 tctctttc 33436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 30915461 - 30915567
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| || ||||| || ||| |||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  262 tctcttt 268  Q
    |||||||    
T  30915561 tctcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 5574589 - 5574484
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| |||||||  ||||||||| |||||| || |||||||| ||| |||||||||||||||  ||| |||||||||  |||| ||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  263 ctcttt 268  Q
    ||||||    
T  5574489 ctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 19930917 - 19930816
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 266  Q
    |||||||| ||||||| |||||||||| |||||| || |||||| | |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  267 tt 268  Q
    ||    
T  19930817 tt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 28863458 - 28863559
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 266  Q
    |||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  267 tt 268  Q
    ||    
T  28863558 tt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 40614002 - 40613898
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| |||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||  ||  |||| |||  |||| |||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  264 tcttt 268  Q
    |||||    
T  40613902 tcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 40701478 - 40701582
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||||| |||||||||||||||||||  | | ||||| |||  ||||||||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  264 tcttt 268  Q
    |||||    
T  40701578 tcttt 40701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 268
Target Start/End: Complemental strand, 10249485 - 10249378
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacact 260  Q
    |||||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||    
T  10249485 taagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 10249386  T
Q  261 ttctcttt 268  Q
    ||||||||    
T  10249385 ttctcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 41575138 - 41575245
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatccc-atacaatcacactttc 263  Q
    |||||||||| |||||||||||||| |||||||||| || ||||||   |||||||||| ||||| ||| ||||||||| ||| | |||| |||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  264 tctttcat 271  Q
    ||||||||    
T  41575238 tctttcat 41575245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 27864704 - 27864809
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||| |||| |||||| || |||||| | ||||||||||||||||||| |||| ||||| |||  | || |||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  264 tctttc 269  Q
    ||||||    
T  27864804 tctttc 27864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 33436210 - 33436290
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtgga 243  Q
    |||||||||||| |||||||||||||| ||| |||||| |  |||||||| ||| ||||||||||||||||| ||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtgga 33436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 45097837 - 45097730
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| |||||||||||||| ||||||||| |||||||| | |||||||||||||| |||  ||| |||| |||  ||||  ||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 45097738  T
Q  262 tctctttc 269  Q
    ||||||||    
T  45097737 tctctttc 45097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 42257191 - 42257297
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||||||||| |||||||| ||||||||  |||||||| ||| ||||||||||||||||  ||  |||| |||  |||| |||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactt 42257290  T
Q  262 tctcttt 268  Q
    |||||||    
T  42257291 tctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 2533123 - 2533191
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||| |||||| ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgt 2533191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 17823781 - 17823895
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtga----tcatgtggatcccatacaatca 256  Q
    |||||||||||||| ||| |||||||||||||| ||||||| | |  ||||| ||||||||||||||||||| |      || |||| ||||||||| ||    
T  17823781 taagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgtaactatatatatggaccccatacaagca 17823880  T
Q  257 cactttctctttcat 271  Q
    |||||||||||||||    
T  17823881 cactttctctttcat 17823895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| |||||||||  |||||| |  |||||||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  263 ct 264  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 17820104 - 17819997
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||||||| |  ||||||| |||||| || |||||||| |||||||||||||||| ||| | | ||||| |||| |||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  264 tctttcat 271  Q
    ||||||||    
T  17820004 tctttcat 17819997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 269
Target Start/End: Complemental strand, 26891616 - 26891499
Alignment:
Q  152 tatattaagtaagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatac 251  Q
    ||||| ||| |||||| |||||| |||| || |||||||||| |||||| || | |||||| |||||||||||||||| ||| ||| ||||| | |  ||    
T  26891616 tatataaagaaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaac 26891517  T
Q  252 aatcacactttctctttc 269  Q
    || |||| ||||||||||    
T  26891516 aagcacattttctctttc 26891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 38732354 - 38732459
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||| ||| ||||| |||  ||||||||| |||||||| |||||||||||||||| ||| |||| |||| |||  ||||  ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  264 tctttc 269  Q
    ||||||    
T  38732454 tctttc 38732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 28381755 - 28381687
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||||||||| ||||||| |||||||||| |||||| |  | |||||| |||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgt 28381687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 38273244 - 38273174
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    |||||| |||||| |||||||| ||||| ||| |||||| || || ||||| |||||||||||||||||||    
T  38273244 aagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgt 38273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 38882915 - 38882846
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||||||||||| ||||||| |||||||||| |||| | || |||||| | |||||||||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 2997567 - 2997482
Alignment:
Q  184 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 2997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 4060685 - 4060753
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||||||||| ||||||| |||||||||  |||||| |  |||||| | |||||||||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgt 4060753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 36168835 - 36168905
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    ||||| |||||| |||||||||||||| ||  ||||||||| || || || |||||||||| |||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtg 36168905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 13365373 - 13365458
Alignment:
Q  184 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    |||||| ||| |||| | || |||||||| |||||||||||||||| |||| ||| |||| |||  ||||  ||||||||||||||    
T  13365373 ccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttc 13365458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 43490121 - 43490186
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgaca 229  Q
    |||| |||||| ||| ||| |||||||||  |||||| || |||||||| ||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 3439992 - 3440084
Alignment:
Q  177 tagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    |||||| |||||||||| ||||||  | | |||||| |||||||||||| ||| ||||| | ||||| |||  |||| |||| ||||||||||    
T  3439992 tagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 27564835 - 27564731
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||||||||||||| |||||| |  |||||||| ||||||||||||||||||| |||| ||||| |||  |||| |||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  264 tcttt 268  Q
    |||||    
T  27564735 tcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 47452420 - 47452316
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| ||||||||||||||||| || |||||||| |||||||||||| ||||||  ||| |||||||||  |||| |||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  264 tcttt 268  Q
    |||||    
T  47452320 tcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 269
Target Start/End: Complemental strand, 51898784 - 51898678
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||||| |||||||| |||||| || |||||||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  263 ctctttc 269  Q
    || ||||    
T  51898684 ctatttc 51898678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  264 tcttt 268  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 9474976 - 9474872
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  264 tcttt 268  Q
    |||||    
T  9474876 tcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 3302633 - 3302526
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||| |||||||||||||  |||| || | | |||||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  264 tctttcat 271  Q
    | ||||||    
T  3302533 tttttcat 3302526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 264
Target Start/End: Original strand, 2581913 - 2582015
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 2582012  T
Q  262 tct 264  Q
    |||    
T  2582013 tct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 32813245 - 32813351
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| |||||||||||||||||| |||||| || || ||||| |||||||||||||||||||| |||  |||| |||  |||| |||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactt 32813344  T
Q  262 tctcttt 268  Q
    |||||||    
T  32813345 tctcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 38595152 - 38595258
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||| ||| | |||||||| |||||| || |||||||| |||||||||||||||||||  ||| ||||| ||| ||||| |||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 38595251  T
Q  262 tctcttt 268  Q
    |||||||    
T  38595252 tctcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 50630457 - 50630562
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||| | |||||||||| ||||||||| |||  ||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  263 ctcttt 268  Q
    ||||||    
T  50630557 ctcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 37649198 - 37649302
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||||| |||||||| ||||||  | |||||||| |||||||||||||||||||| ||| ||| || ||  |||| |||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  264 tcttt 268  Q
     ||||    
T  37649298 ccttt 37649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 41608593 - 41608488
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||| |||||||||||||| |||||| || |||||||  |||||||||||||||| |||  ||| |||| ||| |||||  ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  264 tctttc 269  Q
    ||||||    
T  41608493 tctttc 41608488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 268
Target Start/End: Complemental strand, 44548473 - 44548372
Alignment:
Q  167 taatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctct 266  Q
    |||||||| ||||||||| |||||||| |||||| |  |||| ||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  267 tt 268  Q
    ||    
T  44548373 tt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| |||||||  |||||| |  ||||||||| |||||||| |||||||||||||||||||  ||| |||||  ||  |||| |||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  264 tcttt 268  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 48716382 - 48716278
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| |||||||||| |||||| |  |||||| | |||||||||||||||||||  ||| ||||| |||  |||| ||||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  264 tcttt 268  Q
    |||||    
T  48716282 tcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 8346490 - 8346384
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| |||| || | |||||||| |||||| |  |||||||| |||||||||||||||||||  ||| ||||| ||   |||| |||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactt 8346391  T
Q  262 tctcttt 268  Q
    |||||||    
T  8346390 tctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 38632423 - 38632317
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    ||||||||||||| ||||||| |||||||||| |||||| |  || ||| | |||||||||||||||||||  ||| ||||| |||  |||| |||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  262 tctcttt 268  Q
    | |||||    
T  38632323 tttcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 37926539 - 37926434
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    ||||| |||||| ||||| ||| |||||||| ||||||||  || ||||| ||| ||||||||||||||||  ||  |||||||| |||||  |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  263 ctcttt 268  Q
    ||||||    
T  37926439 ctcttt 37926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 50591100 - 50590995
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||| ||| ||| |||||||||| |||||| || |||||||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  264 tctttc 269  Q
    ||||||    
T  50591000 tctttc 50590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 44453984 - 44454084
Alignment:
Q  169 atgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||| ||||||| | ||| |||| ||||||||  |||| ||| |||||||||||||||| ||| | | |||||||||| |||| |||||||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T
Q  269 c 269  Q
    |    
T  44454084 c 44454084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 5959102 - 5958995
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||| ||| ||||| |||| |||||| |  |||||||| |||||||||||||||| ||| |||| |||| |||  ||||  ||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactt 5959003  T
Q  262 tctctttc 269  Q
    ||||||||    
T  5959002 tctctttc 5958995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 23597193 - 23597122
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    ||||||||||||| ||||||||| |||||||| ||||||  | |||| ||| ||| ||||||||||||||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 49811630 - 49811559
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgt 232  Q
    ||||||| |||||| |||||||||||||||||  |||||| |  |||||| | |||||||||||||||||||    
T  49811630 taagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgt 49811559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 7740732 - 7740802
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtg 233  Q
    ||||| |||||| || |||| ||||| |||  |||||||||||||||||||||| |||||| |||||||||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtg 7740802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 268
Target Start/End: Original strand, 26440741 - 26440838
Alignment:
Q  171 gatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||| |||||||||||||| ||  |||||| || || ||||| ||||||||||||||||||||  ||  ||||||||  | || ||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 41758804 - 41758909
Alignment:
Q  163 agagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacacttt 262  Q
    |||||||||||| ||||||| | |||  ||| |||||| || |||||| | |||||||||||||||||||  |||  |||| |||  |||| ||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  263 ctcttt 268  Q
    ||||||    
T  41758904 ctcttt 41758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 13414792 - 13414865
Alignment:
Q  195 aatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctcttt 268  Q
    |||||| || |||||||| |||||||||||| ||||||  ||| ||||| |||| |||| |||| |||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 26274429 - 26274498
Alignment:
Q  161 taagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacac 230  Q
    ||||| |||||||| ||||||| ||||| |||| ||||||||  |||||| | ||| |||||||||||||    
T  26274429 taagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacac 26274498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 11152476 - 11152373
Alignment:
Q  165 agtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttct 264  Q
    |||||||| | ||||||| |||||||||| |||||| || | |||| | |||||||||||||||||||  |||||| || |||  |||| ||| ||||||    
T  11152476 agtaatgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T
Q  265 ctttc 269  Q
     ||||    
T  11152377 ttttc 11152373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 10211 - 10105
Alignment:
Q  162 aagagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactt 261  Q
    |||||| |||||| ||||||| | |||||||| ||||||||| |||||| | ||| |||||||||||||||  ||| ||||| | | ||||| |||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactt 10112  T
Q  262 tctcttt 268  Q
    |||||||    
T  10111 tctcttt 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 1029 - 924
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||||| |||||||| |||||| || || ||| | ||||||||| |||||||||  ||| ||| |||||  |||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  264 tctttc 269  Q
    ||||||    
T  929 tctttc 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 1029 - 924
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||||| |||||||| |||||| || || ||| | ||||||||| |||||||||  ||| ||| |||||  |||| |||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  264 tctttc 269  Q
    ||||||    
T  929 tctttc 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 152518 - 152603
Alignment:
Q  184 ccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc 269  Q
    |||| ||||| |||||| || |||||||| |||||||||||||||| ||| |||| ||||||||  ||||  ||||||||||||||    
T  152518 ccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttc 152603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 268
Target Start/End: Original strand, 4029 - 4133
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    ||||||||||| ||||||| | |||| ||| |||||| |  || ||||| |||||||||||||||||||  | | |||||||||  | || |||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  264 tcttt 268  Q
    |||||    
T  4129 tcttt 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 8963 - 8858
Alignment:
Q  164 gagtaatgatatatagacatccttaggtggtaatacatccattgacacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttc 263  Q
    |||| |||||||||||||||||||| |||  ||||||    |||||| |||||||||||| |||||| |  ||| ||||| |||| ||||  ||| ||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  264 tctttc 269  Q
    ||||||    
T  8863 tctttc 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University