View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14958_low_6 (Length: 231)
Name: NF14958_low_6
Description: NF14958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14958_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 9 - 215
Target Start/End: Complemental strand, 44310678 - 44310471
Alignment:
| Q |
9 |
atgaataaatgttgttgcaagtggactggagtgatacaatctacaaagaaataagtacattgaacaatactacaatatttgaatgttcnnnnnnn-attt |
107 |
Q |
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| T |
44310678 |
atgaataaatgttgttgcaagtggactggagtgatacaatctacaaagaaataagtacattgaacaatactacaatatttgaatgtttttttttttattt |
44310579 |
T |
|
| Q |
108 |
gtttactggtgttgtttatagtttttagcattgtgattcaagatgattgtttatttcaaactttcattgtttcatttgcatcataagttcttcactgggt |
207 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44310578 |
ttttactggtgttatttatagtttttagcattgtgattcaagatgattgtttatttcaaactttcattgtttcatttgcatcataagttcttcactgggt |
44310479 |
T |
|
| Q |
208 |
aaagatat |
215 |
Q |
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|||||||| |
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| T |
44310478 |
aaagatat |
44310471 |
T |
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