View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14959_high_6 (Length: 360)
Name: NF14959_high_6
Description: NF14959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14959_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 25135148 - 25135481
Alignment:
| Q |
11 |
cataggtacgacgagactgaagcaacagaaactttttgcaatgacaaaaaccacgacgtgactgcaaagtaaccttgttcatgatttaaaaccttgattc |
110 |
Q |
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| T |
25135148 |
cataggtacgacgagactgaagcaacagaaactttttgcaatgacaaaaaccacgacgtgactgcaaagtaaccttgttcatgatttaaaaccttgattc |
25135247 |
T |
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| Q |
111 |
aaatatacacttccctcatcatttcaccctggtatattctcatatttctcaactacaatataaaaactagcacatgtctgaaacttgccattccagaaga |
210 |
Q |
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| T |
25135248 |
aaatatacacttccctcatcatttcaccctggtatattctcatatttctcaactacaatataaaaactagcacatgtctgaaacttgccattccagaaga |
25135347 |
T |
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| Q |
211 |
aagatttaacaaagataatttcctaagaatttgattcctcttgtatgattttgacatttgcaagttgatgaatttgatacctttactctgcaaattacat |
310 |
Q |
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| T |
25135348 |
aagatttaacaaagataatttcctaagaatttgattcctcttgtatgattttgacatttgcaagttgatgaattcgatacctttactctacaaattacat |
25135447 |
T |
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| Q |
311 |
tttcagtgacatacatgatacatgataatgcatt |
344 |
Q |
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| T |
25135448 |
tttcagtgacatacatgatacatgataatgcatt |
25135481 |
T |
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