View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14960_high_8 (Length: 252)
Name: NF14960_high_8
Description: NF14960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14960_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 24514159 - 24513924
Alignment:
| Q |
1 |
agtaaatggcaagcattcaaattggcatctctttctggcttggctgagcccctaggggttattattgtaggtaatatcctctgcttttgctgctttgtac |
100 |
Q |
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| T |
24514159 |
agtaaatggcaagcattcaaattggcatctctttctggcttggctgagcccctaggggttattattgtaggtaatatcctctgcttttgctgctttgtac |
24514060 |
T |
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| Q |
101 |
catattaacgcatctttggtttgacggagagattaacaaaagtacaatgacaaagttatttcgtgattttgttgaagcttcaaagtatagttgttgtcac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
24514059 |
catattaacgcatctttggtttgacggagagattaacaaaaatacaatgacaaagttatttcgtgattttgttgaagcttcaaagtatagttgttgttac |
24513960 |
T |
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| Q |
201 |
aatgtcacatgattttctcgaacataccattgttac |
236 |
Q |
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| |||||||||||||||||||||||||||||||||| |
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| T |
24513959 |
attgtcacatgattttctcgaacataccattgttac |
24513924 |
T |
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