View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14963_low_12 (Length: 210)

Name: NF14963_low_12
Description: NF14963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14963_low_12
NF14963_low_12
[»] chr5 (43 HSPs)
chr5 (1-168)||(7523163-7523327)
chr5 (1-152)||(21739102-21739251)
chr5 (1-168)||(32528706-32528870)
chr5 (1-168)||(11963332-11963496)
chr5 (1-168)||(39788183-39788348)
chr5 (1-168)||(24181565-24181729)
chr5 (1-168)||(31880017-31880181)
chr5 (1-168)||(35701268-35701432)
chr5 (1-168)||(39918498-39918662)
chr5 (6-168)||(34794878-34795037)
chr5 (2-168)||(553387-553551)
chr5 (1-152)||(31644452-31644600)
chr5 (1-167)||(2351672-2351835)
chr5 (5-152)||(4818085-4818230)
chr5 (1-148)||(4689639-4689784)
chr5 (1-168)||(7770220-7770384)
chr5 (1-168)||(22493360-22493523)
chr5 (1-168)||(24036221-24036385)
chr5 (1-152)||(31770532-31770681)
chr5 (1-168)||(6284239-6284404)
chr5 (1-168)||(3735348-3735512)
chr5 (1-168)||(7208171-7208335)
chr5 (1-168)||(28090461-28090625)
chr5 (1-168)||(8560923-8561086)
chr5 (1-168)||(29241369-29241533)
chr5 (1-152)||(40489343-40489492)
chr5 (1-168)||(41790404-41790567)
chr5 (1-147)||(8136848-8136992)
chr5 (6-168)||(41459580-41459738)
chr5 (1-168)||(23091245-23091409)
chr5 (4-168)||(22432253-22432414)
chr5 (24-168)||(5571608-5571747)
chr5 (1-163)||(32092923-32093081)
chr5 (1-162)||(18470369-18470527)
chr5 (1-168)||(27839015-27839178)
chr5 (7-161)||(700548-700700)
chr5 (4-148)||(5598490-5598632)
chr5 (71-152)||(40182470-40182551)
chr5 (1-168)||(7725750-7725914)
chr5 (4-152)||(17031163-17031309)
chr5 (24-168)||(5673135-5673271)
chr5 (4-95)||(37148533-37148622)
chr5 (1-55)||(4664932-4664986)
[»] chr6 (42 HSPs)
chr6 (1-168)||(24242655-24242819)
chr6 (1-168)||(3259674-3259838)
chr6 (1-168)||(3932781-3932945)
chr6 (1-168)||(10959991-10960155)
chr6 (1-168)||(32132354-32132518)
chr6 (4-168)||(2614887-2615048)
chr6 (1-152)||(15277254-15277403)
chr6 (1-168)||(32409826-32409990)
chr6 (1-168)||(17867826-17867990)
chr6 (1-168)||(17877609-17877773)
chr6 (4-152)||(15276914-15277060)
chr6 (1-148)||(166897-167042)
chr6 (1-168)||(10324085-10324249)
chr6 (1-168)||(11613765-11613929)
chr6 (1-152)||(24203368-24203517)
chr6 (1-149)||(11279137-11279283)
chr6 (1-168)||(11382055-11382217)
chr6 (1-168)||(10485148-10485312)
chr6 (4-168)||(34176821-34176982)
chr6 (1-168)||(14925430-14925594)
chr6 (1-168)||(17443253-17443417)
chr6 (1-152)||(4494088-4494238)
chr6 (1-165)||(11212251-11212412)
chr6 (1-168)||(11675348-11675512)
chr6 (4-148)||(18057529-18057671)
chr6 (1-164)||(9902632-9902792)
chr6 (1-148)||(3379720-3379865)
chr6 (3-164)||(8177858-8178015)
chr6 (1-168)||(31870071-31870238)
chr6 (27-168)||(34683985-34684122)
chr6 (37-152)||(3290678-3290789)
chr6 (1-132)||(18597132-18597261)
chr6 (4-161)||(29054354-29054508)
chr6 (1-161)||(32860048-32860206)
chr6 (3-152)||(7396102-7396248)
chr6 (71-168)||(14808043-14808138)
chr6 (1-161)||(23636220-23636378)
chr6 (1-152)||(27824627-27824773)
chr6 (4-126)||(9200364-9200485)
chr6 (4-55)||(9614075-9614126)
chr6 (61-112)||(13415781-13415832)
chr6 (90-152)||(35004189-35004251)
[»] chr1 (66 HSPs)
chr1 (1-168)||(16386854-16387018)
chr1 (1-168)||(844734-844898)
chr1 (1-168)||(26118225-26118389)
chr1 (3-168)||(17887947-17888110)
chr1 (1-152)||(1351445-1351594)
chr1 (1-168)||(6711056-6711220)
chr1 (1-168)||(30105690-30105854)
chr1 (1-168)||(45490885-45491049)
chr1 (4-168)||(16451127-16451288)
chr1 (1-168)||(35387321-35387485)
chr1 (1-168)||(42510525-42510689)
chr1 (1-168)||(28340313-28340477)
chr1 (1-152)||(51264510-51264659)
chr1 (4-152)||(16437377-16437523)
chr1 (1-168)||(12890238-12890402)
chr1 (1-168)||(16476165-16476329)
chr1 (1-152)||(32270368-32270517)
chr1 (1-164)||(50540348-50540508)
chr1 (1-152)||(32289354-32289503)
chr1 (1-164)||(31004136-31004296)
chr1 (1-167)||(1601174-1601335)
chr1 (1-152)||(7183933-7184082)
chr1 (1-152)||(41972926-41973075)
chr1 (4-168)||(16704726-16704887)
chr1 (1-147)||(24339648-24339793)
chr1 (1-168)||(39281894-39282058)
chr1 (1-161)||(41967859-41968017)
chr1 (1-168)||(42512780-42512944)
chr1 (1-164)||(42705247-42705408)
chr1 (1-168)||(5109729-5109892)
chr1 (1-168)||(17327659-17327823)
chr1 (1-168)||(11772642-11772806)
chr1 (1-143)||(44738052-44738192)
chr1 (1-162)||(6029311-6029469)
chr1 (2-164)||(45658825-45658984)
chr1 (1-168)||(26764805-26764969)
chr1 (1-168)||(50304651-50304815)
chr1 (1-168)||(49303364-49303527)
chr1 (1-164)||(13994085-13994244)
chr1 (1-164)||(3414863-3415023)
chr1 (1-152)||(51703174-51703322)
chr1 (2-164)||(10384371-10384530)
chr1 (3-148)||(38087008-38087151)
chr1 (1-152)||(46154915-46155071)
chr1 (2-152)||(50382411-50382562)
chr1 (61-168)||(25539855-25539961)
chr1 (1-164)||(15539900-15540060)
chr1 (72-168)||(38663132-38663227)
chr1 (4-161)||(6143999-6144154)
chr1 (1-151)||(7837149-7837297)
chr1 (5-165)||(25343222-25343380)
chr1 (10-152)||(20494927-20495050)
chr1 (80-152)||(46815816-46815888)
chr1 (5-151)||(504405-504549)
chr1 (5-149)||(570404-570549)
chr1 (1-50)||(21071729-21071778)
chr1 (4-47)||(8839015-8839058)
chr1 (82-152)||(34663942-34664012)
chr1 (3-152)||(6771383-6771530)
chr1 (61-126)||(23799605-23799670)
chr1 (1-49)||(7837490-7837538)
chr1 (4-143)||(26733579-26733716)
chr1 (1-44)||(38663228-38663271)
chr1 (80-150)||(40610739-40610809)
chr1 (94-152)||(46447679-46447737)
chr1 (83-148)||(16643272-16643337)
[»] chr8 (53 HSPs)
chr8 (1-154)||(37664233-37664384)
chr8 (1-168)||(4052471-4052635)
chr8 (1-152)||(8673005-8673154)
chr8 (1-168)||(29563176-29563340)
chr8 (1-168)||(30542972-30543136)
chr8 (1-168)||(34063119-34063283)
chr8 (1-168)||(41709768-41709932)
chr8 (1-168)||(29672273-29672437)
chr8 (1-168)||(34101499-34101663)
chr8 (1-168)||(45446446-45446610)
chr8 (1-168)||(30501136-30501300)
chr8 (1-168)||(12753275-12753439)
chr8 (4-152)||(27103965-27104111)
chr8 (1-168)||(3251606-3251770)
chr8 (1-168)||(6386567-6386731)
chr8 (1-168)||(10467055-10467219)
chr8 (1-152)||(14004994-14005143)
chr8 (3-168)||(37618344-37618506)
chr8 (1-168)||(7591397-7591561)
chr8 (1-152)||(31513533-31513682)
chr8 (1-168)||(32019951-32020115)
chr8 (1-168)||(40389031-40389195)
chr8 (2-168)||(13406886-13407049)
chr8 (1-168)||(17805681-17805846)
chr8 (1-168)||(5968814-5968978)
chr8 (1-148)||(15001476-15001621)
chr8 (4-151)||(37861866-37862011)
chr8 (1-148)||(39642893-39643038)
chr8 (1-152)||(25478249-25478398)
chr8 (1-168)||(41548609-41548773)
chr8 (1-168)||(22999248-22999413)
chr8 (1-152)||(7394764-7394913)
chr8 (4-162)||(29611008-29611163)
chr8 (1-168)||(45114046-45114210)
chr8 (1-161)||(35225659-35225817)
chr8 (61-152)||(32303593-32303684)
chr8 (61-152)||(21272690-21272781)
chr8 (61-168)||(31732055-31732161)
chr8 (1-161)||(16485759-16485917)
chr8 (1-96)||(37474762-37474855)
chr8 (3-168)||(17520594-17520747)
chr8 (76-152)||(6460267-6460344)
chr8 (4-168)||(16595103-16595263)
chr8 (4-152)||(10320232-10320376)
chr8 (75-152)||(10932742-10932819)
chr8 (71-164)||(27109559-27109651)
chr8 (1-152)||(10656636-10656785)
chr8 (4-143)||(22756364-22756501)
chr8 (4-135)||(54193-54322)
chr8 (1-40)||(32303558-32303597)
chr8 (3-152)||(36426201-36426346)
chr8 (89-142)||(14958975-14959027)
chr8 (1-34)||(21272789-21272822)
[»] chr7 (61 HSPs)
chr7 (1-168)||(10932493-10932657)
chr7 (1-168)||(47953185-47953349)
chr7 (4-168)||(11321824-11321985)
chr7 (4-168)||(40753150-40753311)
chr7 (1-152)||(36769505-36769654)
chr7 (1-168)||(18386520-18386683)
chr7 (1-168)||(21784866-21785030)
chr7 (1-152)||(26994161-26994310)
chr7 (1-168)||(43158622-43158786)
chr7 (1-168)||(44748690-44748854)
chr7 (1-168)||(3922639-3922803)
chr7 (1-149)||(41211136-41211282)
chr7 (1-168)||(26371745-26371909)
chr7 (3-164)||(329469-329627)
chr7 (1-168)||(1870129-1870294)
chr7 (1-168)||(29661318-29661482)
chr7 (1-168)||(43189178-43189343)
chr7 (1-168)||(47316634-47316798)
chr7 (2-152)||(18470694-18470840)
chr7 (1-168)||(38301338-38301501)
chr7 (7-168)||(30849188-30849346)
chr7 (4-168)||(32873708-32873869)
chr7 (1-168)||(46633692-46633851)
chr7 (1-164)||(34295347-34295500)
chr7 (4-168)||(30598947-30599108)
chr7 (1-161)||(43368202-43368360)
chr7 (1-168)||(20127284-20127448)
chr7 (1-148)||(1363650-1363795)
chr7 (1-167)||(23349227-23349390)
chr7 (3-168)||(9913520-9913681)
chr7 (3-168)||(9927208-9927369)
chr7 (1-152)||(11250632-11250776)
chr7 (1-164)||(48894716-48894876)
chr7 (2-148)||(43213862-43214006)
chr7 (4-168)||(21133367-21133528)
chr7 (5-161)||(22724471-22724625)
chr7 (1-126)||(16963174-16963297)
chr7 (3-148)||(37966988-37967131)
chr7 (33-151)||(3891994-3892110)
chr7 (1-143)||(26910346-26910486)
chr7 (71-168)||(26652861-26652957)
chr7 (63-168)||(34117447-34117551)
chr7 (1-117)||(11822268-11822382)
chr7 (1-143)||(34519527-34519667)
chr7 (1-164)||(17237075-17237235)
chr7 (73-161)||(41665581-41665669)
chr7 (64-152)||(46408899-46408987)
chr7 (1-161)||(22723968-22724126)
chr7 (4-164)||(48445520-48445677)
chr7 (2-148)||(46448581-46448725)
chr7 (98-168)||(47947755-47947824)
chr7 (77-143)||(48699417-48699483)
chr7 (71-168)||(22631733-22631829)
chr7 (1-50)||(26700587-26700636)
chr7 (84-149)||(42332072-42332137)
chr7 (4-143)||(2048970-2049107)
chr7 (121-168)||(16963103-16963149)
chr7 (105-168)||(44668802-44668865)
chr7 (92-152)||(8453285-8453344)
chr7 (73-133)||(29372785-29372845)
chr7 (79-143)||(35645466-35645530)
[»] chr4 (83 HSPs)
chr4 (1-152)||(20802459-20802608)
chr4 (1-168)||(33176960-33177124)
chr4 (1-168)||(38812514-38812678)
chr4 (1-168)||(23521874-23522038)
chr4 (1-168)||(29785465-29785629)
chr4 (1-152)||(56154630-56154779)
chr4 (1-168)||(33552770-33552934)
chr4 (1-149)||(24002351-24002497)
chr4 (1-168)||(2725061-2725224)
chr4 (1-168)||(21202734-21202897)
chr4 (1-168)||(21580020-21580184)
chr4 (1-168)||(36885926-36886090)
chr4 (1-168)||(52949714-52949878)
chr4 (1-163)||(20694370-20694529)
chr4 (3-149)||(24210331-24210475)
chr4 (2-168)||(50727842-50728005)
chr4 (2-168)||(50735856-50736019)
chr4 (1-165)||(4325788-4325949)
chr4 (4-168)||(52319317-52319478)
chr4 (1-152)||(55065260-55065410)
chr4 (1-168)||(1231305-1231469)
chr4 (1-168)||(32181257-32181421)
chr4 (1-168)||(36497211-36497375)
chr4 (1-152)||(36743616-36743765)
chr4 (1-168)||(44324270-44324434)
chr4 (1-168)||(44649092-44649256)
chr4 (1-152)||(46680438-46680587)
chr4 (1-168)||(50178420-50178585)
chr4 (1-152)||(9512268-9512417)
chr4 (1-152)||(38486185-38486334)
chr4 (1-168)||(54542984-54543147)
chr4 (1-168)||(55593879-55594043)
chr4 (1-152)||(12600895-12601044)
chr4 (1-168)||(47642419-47642583)
chr4 (3-142)||(2629881-2630018)
chr4 (1-152)||(20517950-20518099)
chr4 (1-168)||(34929909-34930073)
chr4 (1-152)||(37865762-37865911)
chr4 (1-168)||(41711841-41712005)
chr4 (1-168)||(11056036-11056200)
chr4 (2-162)||(3649636-3649793)
chr4 (1-152)||(49152028-49152176)
chr4 (3-149)||(42869986-42870127)
chr4 (1-168)||(9807150-9807313)
chr4 (1-168)||(50186522-50186686)
chr4 (1-148)||(50729470-50729615)
chr4 (2-148)||(28115265-28115408)
chr4 (61-168)||(43641093-43641199)
chr4 (1-152)||(47361342-47361486)
chr4 (1-152)||(29616179-29616324)
chr4 (1-152)||(6776587-6776736)
chr4 (1-164)||(29592893-29593053)
chr4 (2-164)||(2786962-2787121)
chr4 (1-148)||(16320532-16320677)
chr4 (1-164)||(39078659-39078819)
chr4 (2-168)||(37695470-37695633)
chr4 (61-168)||(23327911-23328019)
chr4 (2-162)||(26083338-26083496)
chr4 (2-117)||(42772832-42772945)
chr4 (2-148)||(53200572-53200717)
chr4 (2-152)||(22318313-22318461)
chr4 (1-127)||(25978540-25978663)
chr4 (59-168)||(37931914-37932022)
chr4 (1-108)||(6973841-6973946)
chr4 (1-148)||(7554885-7555030)
chr4 (4-143)||(9947947-9948084)
chr4 (1-83)||(14296645-14296725)
chr4 (1-83)||(14314893-14314973)
chr4 (77-149)||(43739473-43739545)
chr4 (105-168)||(14296591-14296653)
chr4 (105-168)||(14314839-14314901)
chr4 (1-148)||(30942801-30942947)
chr4 (61-148)||(7001866-7001952)
chr4 (89-152)||(45577706-45577769)
chr4 (76-142)||(38520518-38520584)
chr4 (64-164)||(13110325-13110425)
chr4 (3-55)||(56487212-56487264)
chr4 (3-40)||(23328015-23328052)
chr4 (5-143)||(3579142-3579279)
chr4 (4-51)||(51518481-51518528)
chr4 (61-142)||(52673830-52673911)
chr4 (92-152)||(40792426-40792486)
chr4 (105-149)||(42772770-42772814)
[»] chr3 (57 HSPs)
chr3 (1-168)||(28675782-28675946)
chr3 (4-168)||(20609580-20609741)
chr3 (1-168)||(12349100-12349264)
chr3 (1-152)||(29584882-29585031)
chr3 (3-164)||(3864606-3864763)
chr3 (2-168)||(39052768-39052931)
chr3 (1-168)||(1344636-1344800)
chr3 (1-168)||(25860350-25860514)
chr3 (1-168)||(29646058-29646222)
chr3 (1-168)||(34026659-34026823)
chr3 (1-168)||(47958361-47958525)
chr3 (1-152)||(51259709-51259858)
chr3 (1-166)||(42636332-42636494)
chr3 (1-165)||(24571276-24571437)
chr3 (1-165)||(40094498-40094659)
chr3 (1-168)||(2135062-2135226)
chr3 (1-168)||(44116931-44117095)
chr3 (1-168)||(51296573-51296737)
chr3 (2-148)||(21373941-21374085)
chr3 (2-168)||(49748841-49749004)
chr3 (1-168)||(31882951-31883115)
chr3 (1-168)||(33364707-33364871)
chr3 (6-152)||(21221295-21221438)
chr3 (4-152)||(53557727-53557873)
chr3 (1-152)||(20255052-20255200)
chr3 (1-168)||(38213346-38213510)
chr3 (1-168)||(51925137-51925301)
chr3 (4-168)||(25927259-25927420)
chr3 (1-148)||(50678809-50678954)
chr3 (1-168)||(4851387-4851549)
chr3 (1-148)||(19906773-19906918)
chr3 (2-168)||(50386386-50386549)
chr3 (1-164)||(3964285-3964444)
chr3 (6-168)||(54622731-54622889)
chr3 (1-162)||(24721482-24721641)
chr3 (3-164)||(3867580-3867738)
chr3 (3-168)||(26282315-26282480)
chr3 (1-168)||(45690835-45690994)
chr3 (1-168)||(3695236-3695385)
chr3 (1-168)||(5442283-5442435)
chr3 (7-152)||(39215404-39215547)
chr3 (7-149)||(34351303-34351443)
chr3 (1-96)||(41682982-41683075)
chr3 (1-161)||(22484672-22484830)
chr3 (3-168)||(44000253-44000415)
chr3 (4-148)||(52300448-52300589)
chr3 (113-168)||(10747209-10747264)
chr3 (98-168)||(41694925-41694994)
chr3 (1-117)||(6179467-6179582)
chr3 (1-46)||(10747311-10747356)
chr3 (6-47)||(53046605-53046646)
chr3 (77-148)||(44267753-44267824)
chr3 (1-43)||(43175589-43175631)
chr3 (61-168)||(25954443-25954548)
chr3 (98-168)||(53046670-53046734)
chr3 (89-142)||(8648572-8648625)
chr3 (105-142)||(32621886-32621923)
[»] chr2 (59 HSPs)
chr2 (1-168)||(9732865-9733029)
chr2 (1-168)||(42706350-42706514)
chr2 (4-152)||(19513627-19513773)
chr2 (1-168)||(34338801-34338965)
chr2 (2-168)||(35114776-35114939)
chr2 (1-168)||(7761508-7761672)
chr2 (1-152)||(37308661-37308810)
chr2 (1-168)||(30798423-30798588)
chr2 (3-152)||(5278771-5278918)
chr2 (1-168)||(17540705-17540870)
chr2 (1-168)||(2645022-2645185)
chr2 (2-149)||(7258906-7259051)
chr2 (1-152)||(32497921-32498070)
chr2 (1-168)||(33366601-33366765)
chr2 (1-152)||(18685842-18685991)
chr2 (2-152)||(33889249-33889397)
chr2 (1-168)||(44284620-44284784)
chr2 (1-168)||(16104265-16104429)
chr2 (3-168)||(12672411-12672573)
chr2 (1-168)||(3913395-3913559)
chr2 (1-168)||(30326267-30326430)
chr2 (1-168)||(40832404-40832568)
chr2 (1-168)||(32766439-32766604)
chr2 (1-168)||(16177818-16177982)
chr2 (1-148)||(28824492-28824637)
chr2 (1-161)||(6896166-6896323)
chr2 (2-152)||(42365583-42365731)
chr2 (1-161)||(38993006-38993164)
chr2 (1-168)||(4641507-4641669)
chr2 (4-148)||(11114882-11115022)
chr2 (1-168)||(10399805-10399969)
chr2 (1-140)||(26981644-26981781)
chr2 (61-168)||(9717215-9717321)
chr2 (61-168)||(37003861-37003967)
chr2 (1-168)||(39461305-39461469)
chr2 (1-134)||(40692321-40692452)
chr2 (1-168)||(2086063-2086218)
chr2 (4-127)||(38623242-38623363)
chr2 (61-168)||(26418914-26419020)
chr2 (3-149)||(8112308-8112453)
chr2 (4-147)||(41366048-41366189)
chr2 (1-167)||(27462737-27462899)
chr2 (61-164)||(12939293-12939395)
chr2 (1-148)||(30712866-30713015)
chr2 (61-134)||(1247171-1247244)
chr2 (1-49)||(37863301-37863349)
chr2 (31-148)||(13829448-13829563)
chr2 (2-152)||(41934587-41934735)
chr2 (69-168)||(45463111-45463208)
chr2 (1-40)||(9717317-9717356)
chr2 (6-136)||(15303180-15303308)
chr2 (4-126)||(18278934-18279053)
chr2 (1-40)||(18793228-18793267)
chr2 (73-139)||(26796247-26796313)
chr2 (6-50)||(45463063-45463107)
chr2 (113-152)||(18793306-18793345)
chr2 (105-152)||(35473037-35473084)
chr2 (83-167)||(20907581-20907664)
chr2 (1-33)||(37003826-37003858)
[»] scaffold0169 (2 HSPs)
scaffold0169 (1-168)||(17995-18159)
scaffold0169 (61-168)||(12535-12641)
[»] scaffold0208 (1 HSPs)
scaffold0208 (1-152)||(2279-2428)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-152)||(101955-102104)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-164)||(15167-15327)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-168)||(5380-5545)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-168)||(51430-51593)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-147)||(23586-23730)
[»] scaffold0957 (1 HSPs)
scaffold0957 (1-168)||(2437-2600)
[»] scaffold0004 (1 HSPs)
scaffold0004 (4-168)||(372908-373069)
[»] scaffold0360 (2 HSPs)
scaffold0360 (1-148)||(15314-15467)
scaffold0360 (98-152)||(13615-13669)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-152)||(19033-19180)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-148)||(1584-1729)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-152)||(42891-43039)
[»] scaffold0729 (1 HSPs)
scaffold0729 (1-152)||(4520-4669)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-147)||(13628-13772)
[»] scaffold0155 (1 HSPs)
scaffold0155 (77-152)||(33559-33634)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-111)||(19097-19205)


Alignment Details
Target: chr5 (Bit Score: 125; Significance: 1e-64; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 7523327 - 7523163
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  7523327 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 7523230  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  7523229 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 7523163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 21739102 - 21739251
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  21739102 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 21739199  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21739200 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 21739251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 32528870 - 32528706
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  32528870 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 32528773  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  32528772 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 32528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11963496 - 11963332
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  11963496 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacagcac 11963399  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  11963398 aactttttgtcccacgtgcaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 11963332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39788348 - 39788183
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||  || |||||||| |||||||||||||||||||||||||||||||    
T  39788348 cagtatttgatttgtaaaactgtttcaggtacaggacaaactgtaggcaaaggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 39788251  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagca-ttttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||| |||||| || ||||||| |||||||||||||||    
T  39788250 aactttttgtcccacgtacaagttgtctaaaatactaaaataacatttttgtc-ccccaaaaatcgtat 39788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 24181565 - 24181729
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  || |||||||| ||||||||||||||||||||||||||| ||     
T  24181565 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagccaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcat 24181662  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  24181663 aactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtc-ccccaaagatcgtat 24181729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 31880017 - 31880181
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  |||  || |||||||| |||||||||||||||||||||||||||||||    
T  31880017 cagtgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 31880114  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||    
T  31880115 aactatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaacaatcgtat 31880181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 35701432 - 35701268
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||     
T  35701432 cagtgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacat 35701335  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||| |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  35701334 aactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 35701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39918662 - 39918498
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  39918662 cagtgtttgatttgtaaaactgtttcagatacaagacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 39918565  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  39918564 aactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtc-ccccaaaaatcgtat 39918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 168
Target Start/End: Complemental strand, 34795037 - 34794878
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgt 105  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||||| |    
T  34795037 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 34794940  T
Q  106 tttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||  |||||||| ||||||    
T  34794939 tttgtcccacgtataagttgtctaaaataccaaaatagcattttgt-tccccaaaattcgtat 34794878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 553551 - 553387
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||  ||| ||| |||||||| |||||||||||| |||||||||||||| ||||    
T  553551 agtgtttgatttataaaactgtttcaagtacaggacaaactggaggcaagagac-aag-acaaaaactcatatttttgtctctcaccaaaccacaacaca 553454  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  553453 actttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccccccaaaaatcgtat 553387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 31644600 - 31644452
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||| ||||| || ||||||||||||||||||||||||||| |||    
T  31644600 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa--gagcaag-acaaatactcatatttttgtccctcaccaaaccacagcac 31644504  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31644503 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 31644452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 2351835 - 2351672
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  2351835 cagtgtttgatttgtaaaactgtttaaggtataggacaaactggaggcaagtgac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 2351738  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgta 167  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||    
T  2351737 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgta 2351672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 4818085 - 4818230
Alignment:
Q  5 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacg 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | || ||| |||||||| ||||||||||||||||||||||||||| ||||||     
T  4818085 gtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaac-aag-acaaaaactcatatttttgtccctcaccaaaccacagcacaact 4818182  T
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4818183 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 4818230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 4689639 - 4689784
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||||||||||||||||||||||||||||||| |||    
T  4689639 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac--aggacaaaaacacatatttttgtccctcaccaaaccacaacac 4689736  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||||||||||||||||| | ||||||| |||||| |||||    
T  4689737 aactttttgtcccacgtacaagttgcctaaaatacaaaaataacattt 4689784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 7770220 - 7770384
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||  || |||||||||||||||||||||| ||||||||||||| |||    
T  7770220 cagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaacacatatttttgtccttcaccaaaccacagcac 7770317  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||| | ||||||| |||||| ||||| |  ||||||||||||||||    
T  7770318 aactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcg-agccccaaaaatcgtat 7770384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 22493360 - 22493523
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||| |||    
T  22493360 cagtgtttaatttgtaaaactgtttcaggtacaggataaactggagccaaaggac-aag-acaaaaactcatatttttgtccctcaccaaaccacagcac 22493457  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||| ||||||||||||||||  || ||||||||||||    
T  22493458 aactttttgtcacacgtacaagttgtctaaaatatcaaaatagcattttgt--ccgcaaaaatcgtat 22493523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24036385 - 24036221
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||  || |||||| | |||||||||||||||||||||||||||||||    
T  24036385 cagtgtttgatttggaaaactgtttcaggtacagcacaaattggaggcaagggac--aggacaaaatctcatatttttgtccctcaccaaaccacatcac 24036288  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||    
T  24036287 aactttttatcccacgtacaagttgtctaaaataccaaaataacattttg-caccccaaaaatcgtat 24036221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31770532 - 31770681
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||  || |||||||| ||||||||| ||||||||||||||||| |||    
T  31770532 cagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaagggac--aggacaaaaactcatatttttatccctcaccaaaccacaacac 31770629  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  31770630 aactttttgtcccacgtacaagttgtctgaaataccaaaatagcattttgtc 31770681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6284239 - 6284404
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  ||||  || ||||||||  || ||||||||||||||||||||||| |||    
T  6284239 cagtgtttgatttgtaaaactgcttcaggtacaggacaaactggaggcatgggac--aggacaaaaacttatttttttgtccctcaccaaaccacaacac 6284336  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaatacc-aaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||    
T  6284337 aactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattttgtc-cctcaaaaatcgtat 6284404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3735512 - 3735348
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||  || ||||||||  |||||||||||| ||||||||||||| |||    
T  3735512 cagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggaggcaatggac--aggacaaaaactgatatttttgtccatcaccaaaccacagcac 3735415  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||    
T  3735414 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-ctccaaaaatcgtat 3735348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 7208171 - 7208335
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||  |||  || || ||||| ||||||||||||||||||||||||||| |||    
T  7208171 cagtgtttgatttgtaaaactgtttcaggtacgggacaaactggatgcaagagac--agaaccaaaactcatatttttgtccctcaccaaaccacagcac 7208268  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||||  || ||||||||||||    
T  7208269 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgt-tcctcaaaaatcgtat 7208335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28090461 - 28090625
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||| ||| |||    
T  28090461 cagtgtttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaactacaacac 28090558  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||| |||||| ||||||||| || ||||||||||||    
T  28090559 aactttttgtcccacgtacaagttgtctaaaatacaaaaataacattttgtc-cctcaaaaatcgtat 28090625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 8560923 - 8561086
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||| ||||||||  |||||||||| |||||||||||||||||||    
T  8560923 cagtgtttgatttgtaaaactgtttcagatacaggacaaactgaaagcaaaggac-aag-acaaaaactgatatttttgttcctcaccaaaccacatcac 8561020  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||| ||| |||||||||||| |||||||||||||| ||||| ||  |||||||||||||||    
T  8561021 aactttttgttccaggtacaagttgtctaaaataccaaaataacatttcgt--ccccaaaaatcgtat 8561086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29241533 - 29241369
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||  ||  ||||| | |||||||||||||||| |||||||||| |||    
T  29241533 cagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggac--aggccaaaagctcatatttttgtccctcgccaaaccacagcac 29241436  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||| | |||||| ||||||||||||||||| || ||||||||||||    
T  29241435 aactttttgtcccacgtacaagttggctaaaatatcaaaatagcattttgtc-cctcaaaaatcgtat 29241369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 40489492 - 40489343
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||   | |||||||| |||||||||||||||||||||| |||| |||    
T  40489492 cagtgtttgatttgtaaaactgtttcaggtagaagacaaactggaggcaagggacg--ggacaaaaactcatatttttgtccctcaccaaatcacagcac 40489395  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  40489394 aactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtc 40489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 41790404 - 41790567
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||   ||  || |||||||| ||||||||||||||||||||||||||| |||    
T  41790404 cagtgtttgatttgtaaaactgtttcag-tacaggacaaactggaggcaataaac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 41790500  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||| ||||| ||||||| |||||| ||||||||| |||||||||||||||    
T  41790501 aactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtc-ccccaaaaatcgtat 41790567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8136992 - 8136848
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  8136992 cagtgtttgttttgtaaaactgtttcagatacaggacaaactggaggcaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 8136895  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatt 147  Q
    ||| |||||||| |||||||||||||| |||||||||||||| ||||    
T  8136894 aactttttgtcctacgtacaagttgtctaaaataccaaaataacatt 8136848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 6 - 168
Target Start/End: Complemental strand, 41459738 - 41459580
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||   |||||| ||||||||||||||||||||||||| | |||||| |    
T  41459738 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag--aaaaaactcatatttttgtccctcaccaaaccagagcacaactt 41459642  T
Q  106 tttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||| |||||||||||||||| |||||| ||||||| ||||||||| || ||||||||||||    
T  41459641 tttgttccacgtacaagttgtctaaaatatcaaaataacattttgtc-cctcaaaaatcgtat 41459580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23091245 - 23091409
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| |||||||| ||||||||||||| ||| ||||||||| |||    
T  23091245 cagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggac-aag-acaaaaactcatatttttgtccgtcatcaaaccacaacac 23091342  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| |||||| || ||||| |||||| ||||||| ||||||||| || ||||||||||||    
T  23091343 aactttttgtctcacgtataaattgtctaaaatatcaaaataacattttgtc-cctcaaaaatcgtat 23091409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 22432253 - 22432414
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||  |||  || ||||||||  |||||||||||||||| ||||||||| |||||     
T  22432253 tgtttgatttgtaaaactgtttcaggttcaggataaactggaggcaagagac--aggacaaaaactgatatttttgtccctcatcaaaccacaacacaat 22432350  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||| || |||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  22432351 tttttgtctcaagtacaagttgtctaaaataccaaaatagcatttcgtc-ccccaaaaatcgtat 22432414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 5571608 - 5571747
Alignment:
Q  24 ttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagt 123  Q
    ||||||||||||||||||||||||||| ||||  || |||||||  ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  5571608 ttcaggtacaggacaaactggaggcaagggac--aggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagt 5571705  T
Q  124 tgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||| |||||||||||||||||  ||||| |||||||||||||||    
T  5571706 tgtctaaaataccaaaatagca--ttgtc-ccccaaaaatcgtat 5571747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32092923 - 32093081
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||   || ||||||||  | |||||||||| ||||||||||||| |||    
T  32092923 cagtgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaaggat--aggacaaaaactgaaatttttgtcc-tcaccaaaccacagcac 32093019  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaat 163  Q
    ||| ||||||||||||||||| || || |||||||||||||||||||| ||| ||||||||||    
T  32093020 aactttttgtcccacgtacaaattatctaaaataccaaaatagcatttcgtc-ccccaaaaat 32093081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18470369 - 18470527
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||| |||| ||| ||||||||  | |||||||||||| ||||||||||| |||    
T  18470369 cagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggac-aag-acaaaaactgaaatttttgtcccttaccaaaccacagcac 18470466  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
    ||| |||| |||||||||||||||||| |||| ||||||||| ||||| ||| |||||||||    
T  18470467 aactttttatcccacgtacaagttgtctaaaacaccaaaataacatttcgtc-ccccaaaaa 18470527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 27839015 - 27839178
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||  || | |||| || | |||||||||||||||||||||| |  ||    
T  27839015 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaatggac--aggataaaa-cataaatttttgtccctcaccaaaccataaaac 27839111  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| || |||||||||||| |||||||||||||||| ||||||| | |||||||||||||    
T  27839112 aactttttgtctcatgtacaagttgtctaaaataccaaaatagccttttgtc-ctccaaaaatcgtat 27839178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 700548 - 700700
Alignment:
Q  7 ttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgtt 106  Q
    ||||||||||||||||||||||||||| |||||||  ||| ||| |||| ||  |||||||  ||||||||||| ||||||||||||||| |||||| ||    
T  700548 ttgatttgtaaaactgtttcaggtacaagacaaacaagagacaagggacaaa--acaaaaattcatatttttgttcctcaccaaaccacaacacaacttt 700645  T
Q  107 ttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||||| |||||||||||| || ||||||||||||||  |||||||| ||| ||||    
T  700646 ttgtctcacgtacaagttatctaaaataccaaaatattattttgtcccccgaaaa 700700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 5598632 - 5598490
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||   || ||||||||| |||||||||||| ||| ||||| ||| ||||||    
T  5598632 tgtttgatttgtaaaactgtttcaggtacgagacaaactggaggcaagggag--aggacaaaaacagatatttttgtccttcatcaaacaacagcacaac 5598535  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
     ||||||| ||||||||| ||||| |||||| ||||||| |||||    
T  5598534 tttttgtctcacgtacaacttgtctaaaatatcaaaataacattt 5598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 40182551 - 40182470
Alignment:
Q  71 atatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  40182551 atatttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtc 40182470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 7725750 - 7725914
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||| |||||| |||||||||| ||| |||||||||| |||| ||||  |  |||||||| ||||||||||||| |||  |||||||| |||    
T  7725750 cagtgtttgattagtaaaattgtttcaggtgcagaacaaactggatgcaagggac--atgacaaaaactcatatttttgtccttcattaaaccacaacac 7725847  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||| |||||||| |||   |||||||||||||| ||| |||||||||||||||    
T  7725848 aactttttgtcccacgtataagttgtctaaatatccaaaatagcatttcgtc-ccccaaaaatcgtat 7725914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 17031309 - 17031163
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||||||||||  || ||||||||| | ||||||| ||||||  ||| |||| ||||||    
T  17031309 tgtttgatttgtaaaactgtttcagggacagtacaaattggaggcaaaggac--aggacaaaaacataaatttttgcccctcattaaatcacagcacaac 17031212  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     ||| |||||||||||||||| |  ||||||| |||||||| |||||||    
T  17031211 ttttcgtcccacgtacaagttatttaaaatacaaaaatagctttttgtc 17031163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 5673271 - 5673135
Alignment:
Q  24 ttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagt 123  Q
    |||||||||| || ||||||||||||| |||| |||  ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||        
T  5673271 ttcaggtacacgataaactggaggcaagggac-aagt-caaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtac---- 5673178  T
Q  124 tgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||| |||||| ||||||| ||||||||| |||||||||||||||    
T  5673177 -gtctaaaatatcaaaataacattttgtc-ccccaaaaatcgtat 5673135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 37148533 - 37148622
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccac 95  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| ||||   | ||||||||  | |||||||| ||||||||||||||    
T  37148533 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggac--gggacaaaaactgaaatttttgttcctcaccaaaccac 37148622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4664986 - 4664932
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac 55  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||| ||||    
T  4664986 cagtgtttgatttgtaaaacagtttcagggacaggacaaacaggaggcaagggac 4664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 3e-62; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 24242819 - 24242655
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  24242819 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaca--acaaaaactcatatttttgtccctcaccaaaccacatcac 24242722  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  24242721 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 24242655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3259838 - 3259674
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  3259838 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 3259741  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  3259740 aactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 3259674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3932781 - 3932945
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |  || |||||||| |||||||||||| ||||||||||||||||||    
T  3932781 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggggc--aggacaaaaactcatatttttgtctctcaccaaaccacatcac 3932878  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  3932879 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 3932945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10960155 - 10959991
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  || |||||||| ||||||||||||||||| ||||||||| |||    
T  10960155 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagggac--aggacaaaaactcatatttttgtccctcaacaaaccacaacac 10960058  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  10960057 aactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtc-ccccaaaaatcgtat 10959991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32132354 - 32132518
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||| ||||| |||    
T  32132354 cagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaatccacaacac 32132451  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  32132452 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 32132518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 2615048 - 2614887
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||||||    
T  2615048 tgtttgatttgtaaaattgtttcaggtacaggacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcacaac 2614951  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  2614950 tttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 2614887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 15277254 - 15277403
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  15277254 cagtgtttgatttgtaaaattgtttaaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 15277351  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  15277352 aactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtc 15277403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32409826 - 32409990
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  32409826 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 32409923  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||  |||||||||| ||||||||||||||| |||||||| || ||||||||||||    
T  32409924 aactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtc-cctcaaaaatcgtat 32409990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17867990 - 17867826
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | |||||| ||||||||||||||||| ||||||||| |||    
T  17867990 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-ataaaaactcatatttttgtccctcatcaaaccacagcac 17867893  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||    
T  17867892 aactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 17867826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17877773 - 17877609
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | |||||| ||||||||||||||||| ||||||||| |||    
T  17877773 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-ataaaaactcatatttttgtccctcatcaaaccacagcac 17877676  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||    
T  17877675 aactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 17877609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 15276914 - 15277060
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||||||||||    
T  15276914 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcacaac 15277011  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     |||| |||||||||||||||||| |||| | |||||||||||||||||    
T  15277012 tttttttcccacgtacaagttgtctaaaagaacaaaatagcattttgtc 15277060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 166897 - 167042
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  166897 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacata--acaaaaactcatatttttgtccctcaccaaaccacaacac 166994  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  166995 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 167042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10324085 - 10324249
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  10324085 cagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 10324182  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||    
T  10324183 aactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtc-cccaaaaaatcgtat 10324249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11613765 - 11613929
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||  || |||||||| ||||||||||||||||||||||||||| |||    
T  11613765 cagtgtttgatttgtaaaactgtttcaggtacaggacaaaatggagacaaggaac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 11613862  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||    
T  11613863 aactttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtc-cctcaaaaatcgtat 11613929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 24203517 - 24203368
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  24203517 cagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 24203420  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  24203419 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 24203368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11279283 - 11279137
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  11279283 cagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcatgggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 11279186  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  11279185 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcatttt 11279137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11382217 - 11382055
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||  ||||||||||||| |||    
T  11382217 cagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtc--tcaccaaaccacaacac 11382122  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  11382121 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 11382055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10485312 - 10485148
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||||||||| ||||||||| |||    
T  10485312 cagtgtttgatttgtaaaattatttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtccctcagcaaaccacagcac 10485215  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  10485214 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 10485148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 34176982 - 34176821
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||  |||  |  |||||||| |||||||||||| ||||||||| |||| ||||||    
T  34176982 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagtgac--atgacaaaaactcatatttttgtctctcaccaaatcacagcacaac 34176885  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||    
T  34176884 tttttgtcccacgtacaagtagtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 34176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 14925430 - 14925594
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || | || ||||  || |||||||| |||||||||||||||||||||||||||  ||    
T  14925430 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgtaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagtac 14925527  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||| ||||||||||| |||||||||||||||||||  ||| ||| |||||||||||    
T  14925528 aactttttgtcccacttacaagttgtctaaaataccaaaatagcattccgtc-ccctaaaaatcgtat 14925594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17443417 - 17443253
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||  |||||||||||||||||||| || |||| ||||  || |||||||| ||||||||| |||||||||||||||||  ||    
T  17443417 cagtgtttgatttgtaaaaccatttcaggtacaggacaaactagatgcaagggac--aggacaaaaactcatatttttatccctcaccaaaccacagtac 17443320  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||    
T  17443319 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcgtc-ctccaaaaatcgtat 17443253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 4494088 - 4494238
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcac-aaaaacacatatttttgtccctcaccaaaccacatca 99  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||  || || |||||| |||||||||||||||||||||||||||  |    
T  4494088 cagtgtttgatttgtaagactctttcaggtacaggacaaactggaggcaagtgac--aggacaaaaaactcatatttttgtccctcaccaaaccacagta 4494185  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||| ||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  4494186 caactttttgtcccacgtacaagttgtctaaaataccgaaataacattttgtc 4494238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 11212412 - 11212251
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || ||||  |  |||||||| |||| |||||||||||||||||||||| ||     
T  11212412 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagataagggac--atgacaaaaactcatacttttgtccctcaccaaaccacaacat 11212315  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcg 165  Q
    ||| ||||||| ||||| ||||||||| |||||||||||||| ||||||||| || |||||||||    
T  11212314 aaccttttgtctcacgtgcaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcg 11212251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11675348 - 11675512
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||  ||||||||||| |||||||||||| | |||    
T  11675348 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac--aggacaaaaactgatatttttgtctctcaccaaaccataacac 11675445  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| ||||||||||||| | |  |||||||| |||| |||| | ||| |||||||||||||||    
T  11675446 aactttttatcccacgtacaagctttgtaaaatacctaaatggcatctcgtc-ccccaaaaatcgtat 11675512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 18057671 - 18057529
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||| || |||| |||||||| || | || ||||  |  |||||||| |||||||||||||||||||||||||||  |||||    
T  18057671 tgtttgatttgtaaaactgtttgagatacatgacaaactagatgtaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacagtacaac 18057574  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
     ||||||||||||||||||||||| ||||||||||||||||||||    
T  18057573 tttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 18057529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9902632 - 9902792
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||  |||||||||||||| |||||||||| |||| || ||||  || ||||||||  ||||||||||||||||  |||||||| |||    
T  9902632 cagtgtttaatttgttgaactgtttcaggtataggacaaactagaggtaagggac--aggacaaaaactgatatttttgtccctcattaaaccacagcac 9902729  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||    
T  9902730 aactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcgtc-ccccaaaaatc 9902792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3379865 - 3379720
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||  ||| ||| ||||||||  ||||||||||| |||||||||||| | |||    
T  3379865 cagtgtttgatttataaaactgtttcagatacaggacaaactggaggcaagagac-aag-acaaaaactgatatttttgtcgctcaccaaaccatagcac 3379768  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||| ||| |||||||||||  |||||||||||||||||||    
T  3379767 aactttttgtctcacatacaagttgtcttaaataccaaaatagcattt 3379720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 8177858 - 8178015
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||| ||||  || | |||||   |||||||||||||| ||||||||||| |||||    
T  8177858 gtgtttgatttataaaactgtttcaggtacaaaacaaactggaggcaagggac--aggataaaaatg-atatttttgtcccttaccaaaccacaacacaa 8177954  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    | ||||||||||||| ||||||||| |||||||||||||| ||||| ||| |||||||||||    
T  8177955 ctttttgtcccacgttcaagttgtctaaaataccaaaataacatttcgtc-ccccaaaaatc 8178015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 31870071 - 31870238
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtaca---ggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacat 97  Q
    ||||||||||||||||||||||| ||||| |||   | ||||||| ||||||| |||| ||  ||||||||  ||||||||||||||||||||||||||     
T  31870071 cagtgtttgatttgtaaaactgtctcaggaacaacagaacaaactagaggcaagggacaaa--acaaaaactgatatttttgtccctcaccaaaccacaa 31870168  T
Q  98 cacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||| |||||||||||||| | |||||| ||||||| |||||||||||| ||| |||||||| ||||||    
T  31870169 cacaactttttgtcccacgtataggttgtctaaaatacaaaaatagcatttcgtc-ccccaaaactcgtat 31870238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 34683985 - 34684122
Alignment:
Q  27 aggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgt 126  Q
    ||||||| |||||||||||||||| ||||  |  |||||||| |  |||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  34683985 aggtacatgacaaactggaggcaagggac--acgacaaaaactc--atttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgt 34684080  T
Q  127 c-gaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |  |||||||||||||||||||||||| | |||||||||||||    
T  34684081 ctaaaaataccaaaatagcattttgtc-ctccaaaaatcgtat 34684122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 3290789 - 3290678
Alignment:
Q  37 caaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaatacc 136  Q
    |||||||||||||| ||||  || |||||||| ||||||||||||||| ||||||||||| |||||| ||||  |||||||| |||||||| ||||||||    
T  3290789 caaactggaggcaagggac--aggacaaaaactcatatttttgtcccttaccaaaccacaacacaacttttt--cccacgtataagttgtctaaaatacc 3290694  T
Q  137 aaaatagcattttgtc 152  Q
    ||||||||||||||||    
T  3290693 aaaatagcattttgtc 3290678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18597132 - 18597261
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| | | ||||||| |||||||| ||||  |  |||||| |  | |||||||||||||||||||||||| |||    
T  18597132 cagtgtttgatttgtaaaactgtttcagggatatgacaaaccggaggcaagggac--atgacaaaatctgaaatttttgtccctcaccaaaccacaacac 18597229  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaa 132  Q
    ||| |||||||||||||| |||||||| ||||    
T  18597230 aactttttgtcccacgtataagttgtctaaaa 18597261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 29054508 - 29054354
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaac-acatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||| |||||||| |||||||||| |||| |||| ||||  |  |||||||| ||| ||||||||||||| |||||||||| |||||    
T  29054508 tgtttgatttgtaaaacagtttcaggaacaggacaaattggaagcaagggac--atgacaaaaactaca-atttttgtccctcgccaaaccacagcacaa 29054412  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    | ||||||| ||||||||||||||| |||||| ||||||| ||||| ||| ||| ||||    
T  29054411 ctttttgtctcacgtacaagttgtctaaaata-caaaataacatttcgtcacccaaaaa 29054354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 32860206 - 32860048
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||  |  |||||| |    |||||||||| || |||||||||| |||    
T  32860206 cagtgtttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggac--atgacaaaagctgcaatttttgtccatcgccaaaccacagcac 32860109  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| ||||||| |||||||||||| || ||||||| |||||| ||||| ||| ||| ||||    
T  32860108 aaccttttgtctcacgtacaagttttctaaaatacaaaaataacatttcgtcacccaaaaa 32860048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 7396102 - 7396248
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||||||||||||| ||||||| || ||| ||||| ||||| |||| ||||  || ||||||||| | || || ||||||||| |||||||  |||||    
T  7396102 gtgtttgatttgtaaagctgtttctgggacatgacaagctggaagcaatggac--aggacaaaaacagaaatctt-gtccctcactaaaccactacacaa 7396198  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    | ||||||| |||||||||||| || ||||||| |||||||  |||||||    
T  7396199 ctttttgtctcacgtacaagttatctaaaatacaaaaatagtgttttgtc 7396248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 14808043 - 14808138
Alignment:
Q  71 atatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| | ||||||  || |||||||||| |||||  || |||||||||||||||    
T  14808043 atatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtc-taagtaccaaaataacatttcatc-ccccaaaaatcgtat 14808138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 23636378 - 23636220
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||| ||||||| || |||||||| |||| ||| || | | |||||| |||||||||||   |||  |||||||| |||    
T  23636378 cagtgtttgatttgtaaaattgttttaggtacatgataaactggatgcaa-ggaatagg-ataaaaactcatatttttgttattcattaaaccacaacac 23636281  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||  ||||||| |||||||||||| |  ||||  |||||||||||||| ||| ||||||||    
T  23636280 aaatttttgtctcacgtacaagttatttaaaaatccaaaatagcatttcgtccccccaaaa 23636220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 27824627 - 27824773
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||  || | |||||||||| ||||||| ||| |||| | || || | | |||   ||||||||  | ||||||||||    
T  27824627 cagtgtttgatttgtaaaactgtttttgggaaaggacaaactagaggcaaggga-taag-agaagaaaaaaaatt---gtccctcattataccacatcac 27824721  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||| |||| || ||||||| |||||||| |||||||    
T  27824722 aactttttgtcccacgtacgagttatccaaaatacaaaaatagctttttgtc 27824773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 9200364 - 9200485
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaag-gactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||||||||||||||||||| |   ||| |||||||| ||||| ||| ||| ||| ||||||||| | ||| || ||||||||||||||| || ||||    
T  9200364 tgtttgatttgtaaaactgttttaaagacatgacaaactagaggctaagagac-aag-acaaaaacaaaaattcttctccctcaccaaaccatataacaa 9200461  T
Q  103 cgttttgtcccacgtacaagttgt 126  Q
    | ||||||||||| ||||| ||||    
T  9200462 ctttttgtcccacatacaaattgt 9200485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 9614126 - 9614075
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac 55  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||| ||||    
T  9614126 tgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagggac 9614075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 13415832 - 13415781
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcc 112  Q
    ||||||||| | ||||||||||||||| |||||||||| |||| ||||||||    
T  13415832 acaaaaacaaagatttttgtccctcactaaaccacatcgcaactttttgtcc 13415781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 35004189 - 35004251
Alignment:
Q  90 aaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||| ||||||  ||||||||||||||||||| || |||||| ||||||||  |||||||    
T  35004189 aaccacaacacaactctttgtcccacgtacaagttttctaaaatatcaaaatagatttttgtc 35004251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 3e-62; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16387018 - 16386854
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  16387018 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 16386921  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  16386920 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 16386854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 844734 - 844898
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  844734 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 844831  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  844832 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 844898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26118225 - 26118389
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||||||||||||||||| |||| |||    
T  26118225 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac--aggacaaaaactcatatttttgtccctcaccaaatcacagcac 26118322  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||| |||||||| |||||||||||||||||||||||| || ||||||||||||    
T  26118323 aactttttgtcccacgtaaaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 26118389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 17888110 - 17887947
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||| |||||||||||||||| |||||||||| |||||    
T  17888110 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcgccaaaccacaacacaa 17888013  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    | ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  17888012 ctttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccccccaaaaatcgtat 17887947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 1351445 - 1351594
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||  || |||||||| ||||||||||||||||||||||||||| |||    
T  1351445 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 1351542  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1351543 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 1351594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 6711056 - 6711220
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  6711056 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 6711153  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||  ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  6711154 aattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 6711220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 30105690 - 30105854
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||     
T  30105690 cagtgtttgatttgtaaaactgtttcaggtaaaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcat 30105787  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  30105788 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 30105854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 45490885 - 45491049
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  45490885 cagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacaacac 45490982  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  45490983 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 45491049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 16451288 - 16451127
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| |||||||||||| |||||||||||||| ||||||    
T  16451288 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtctctcaccaaaccacaacacaac 16451191  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  16451190 tttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 16451127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 35387321 - 35387485
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  35387321 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggtaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 35387418  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||| |||||||||||||||| ||||||||||||||||||||| || || ||||||||||||    
T  35387419 aactttttgttccacgtacaagttgtctaaaataccaaaatagcattttatc-cctcaaaaatcgtat 35387485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 42510689 - 42510525
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||  || |||||||| |||||||||||| |||||||||||||| |||    
T  42510689 cagtgtttgattcgtaaaactgtttcaggtacaggacaaactggagacaagggac--aggacaaaaactcatatttttgtctctcaccaaaccacagcac 42510592  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  42510591 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 42510525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28340313 - 28340477
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||| ||||||||| |||    
T  28340313 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac-aag-acaaaaactcatatttttgtccctcatcaaaccacagcac 28340410  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  28340411 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 28340477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 51264659 - 51264510
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||| |||    
T  51264659 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-acaaaaactcatatttttgtccctcaccaaaccacaacac 51264562  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  51264561 aactttttgtcccacgtacaagttgtttaaaatactaaaatagcattttgtc 51264510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 16437523 - 16437377
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||  || |||||||| ||||||||||||||||||||||||||| ||||||    
T  16437523 tgtttgatttgtaaaactgtttcagctacaggacaaactagaggcaaaggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacacaac 16437426  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  16437425 tttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc 16437377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 12890402 - 12890238
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||  || |||||||| ||||||||||||||||| ||||||||| |||    
T  12890402 cagtgtttgatttgtaaaactgtttctggtacaggataaactggaggcaagggac--aggacaaaaactcatatttttgtccctcatcaaaccacagcac 12890305  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||||||| || ||||||||||||    
T  12890304 aactttttgtcccacgtacaagttgtctaagataccaaaatagcattttgtc-cctcaaaaatcgtat 12890238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 16476165 - 16476329
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||| ||||  || | |||||| ||||||||||||||||||||||||||  |||    
T  16476165 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgcaagggac--aggataaaaactcatatttttgtccctcaccaaaccacggcac 16476262  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  16476263 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaaaaattgtat 16476329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 32270517 - 32270368
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  32270517 cagtgtttgatttgtaaaactgtttcaggtagaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 32270420  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||||| |||||||||||| |||||| |||||||||||||||||    
T  32270419 aactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtc 32270368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 50540508 - 50540348
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  || ||| |||| ||||||||||||| ||| ||||||||| |||    
T  50540508 cagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggac--aggacataaactcatatttttgtccttcatcaaaccacaacac 50540411  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  50540410 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaaaaatc 50540348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 32289354 - 32289503
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||| |||    
T  32289354 cagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggac-aag-acaaaaactcatatttttgtccctcaccaaaccacagcac 32289451  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||| |||||||||||||||  ||||||||||||||||||||||||    
T  32289452 aactttttgttccacgtacaagttgtttaaaataccaaaatagcattttgtc 32289503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31004296 - 31004136
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  || ||||||||  || ||||||||||||||||||||||| |||    
T  31004296 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacgggac--aggacaaaaactgatgtttttgtccctcaccaaaccacaacac 31004199  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||    
T  31004198 aactttttgtcccacgtacaagttgtctaaaataccaaaatagtatttcgtc-ccccaaaaatc 31004136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 1601335 - 1601174
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||   || |||||||| |  |||||||||||||||||||||||| |||    
T  1601335 cagtgtttgatttgtaaaacggtttcaggtacaggacaaactggaggcaaggga--tagaacaaaaactc--atttttgtccctcaccaaaccacaacac 1601240  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgta 167  Q
    ||| ||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  1601239 aactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtc-caccaaaaatcgta 1601174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 7184082 - 7183933
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||| ||||||||||| |||    
T  7184082 cagtgtttgatatgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtcccttaccaaaccacaacac 7183985  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||| |||||||||||||| |||||||||| |||| ||||||||    
T  7183984 aactttttgtcctacgtacaagttgtctaaaataccaatatagtattttgtc 7183933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 41973075 - 41972926
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||  ||    
T  41973075 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacactac 41972978  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  41972977 aactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtc 41972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 16704887 - 16704726
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||  |  ||||||||| |||||||||||||| ||||||||||||||||||    
T  16704887 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--acgacaaaaacatatatttttgtcccttaccaaaccacatcacaac 16704790  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
      |||||| ||| ||||||||||| |||||||||||||||| ||||||| | |||||||||||||    
T  16704789 tctttgtctcacatacaagttgtctaaaataccaaaatagctttttgtc-ctccaaaaatcgtat 16704726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 24339648 - 24339793
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcacc-aaaccacatca 99  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||| |||||||| ||    
T  24339648 cagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaaccacaaca 24339745  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatt 147  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||||    
T  24339746 caactttttttcccacgtacaagttgtctaaaataccaaaatagcatt 24339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39282058 - 39281894
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||| || |||| ||||  || |||||||| |||||||||||||||||||||||||||  ||    
T  39282058 cagtgtttgatttgtaaaactgtttaaggtacaggacaaactagatgcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagtac 39281961  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||| |||||||||||||| |||||||||||||| ||||| ||| | |||||||||||||    
T  39281960 aactttttgtcctacgtacaagttgtctaaaataccaaaataacatttcgtc-ctccaaaaatcgtat 39281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 41967859 - 41968017
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||  ||| ||| |||||||| ||||||||||||||| ||||||||||| |||    
T  41967859 cagtatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagagac-aag-acaaaaactcatatttttgtcccttaccaaaccacaacac 41967956  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||| ||||||| ||| ||||    
T  41967957 aactttttgtctcacgtacaagttgtctaaaataccaaaatagccttttgtctcccaaaaa 41968017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 42512780 - 42512944
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||| ||||| ||||||||| |||    
T  42512780 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtgcctcagcaaaccacaacac 42512877  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||| |||||||| ||||| |||||| |||||||| |||||||| |||||||||||||||    
T  42512878 aactttttgtcctacgtacaaattgtctaaaatatcaaaatagaattttgtc-ccccaaaaatcgtat 42512944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 42705247 - 42705408
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||   | | |||||| ||||||||||||||||||||||||||| |||    
T  42705247 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacgg-gaaaaaaaactcatatttttgtccctcaccaaaccacaacac 42705345  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||| |||||||||||||||||||  ||||  ||||||||||||||||| |||||||||||    
T  42705346 aacttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtc-ccccaaaaatc 42705408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5109892 - 5109729
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||  || |||||||| ||| |||||||||||||||||||||||||||    
T  5109892 cagtgtttgatttgtaaaactgtttcaggtacaagacaaattggaggcaagggac--aggacaaaaactcatgtttttgtccctcaccaaaccacatcac 5109795  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||| | |||||||||||| |||||  ||||||| ||||||||| |||||||||| ||||    
T  5109794 aactttttgtccaaagtacaagttgtctaaaat-gcaaaataacattttgtc-ccccaaaaattgtat 5109729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17327659 - 17327823
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||  || |||||||| |||||||||||||||||||||| |||| |||    
T  17327659 cagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagtcaagggac--aggacaaaaactcatatttttgtccctcaccaaatcacagcac 17327756  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| || |||||| || || ||||||||||||||  |||||||| |||||||||||||||    
T  17327757 aactttttgtctcatgtacaaattatctaaaataccaaaataatattttgtc-ccccaaaaatcgtat 17327823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 11772642 - 11772806
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||| |||    
T  11772642 cagtgtttgatttgtaaaactgtttcaggtacaaggcaatctggaggcaaaggac-aag-acaaaaactgatatttttgtccctcaccaaaccacagcac 11772739  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||| ||||| ||||   |||||||||||||| |||| ||| |||||||||||||||    
T  11772740 aactttttgtcccacctacaaattgttttaaataccaaaatagtatttcgtc-ccccaaaaatcgtat 11772806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 44738052 - 44738192
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||||||||||||||||| |||||  ||||||||| ||||  || || ||||| |||||||||||||||||||||||||||||||    
T  44738052 cagtgtttaatttgtaaaactgtttcaggtacatgacaacttggaggcaagggac--aggaccaaaactcatatttttgtccctcaccaaaccacatcac 44738149  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||    
T  44738150 aactttttgtcccacgtacaagttgtctaaaatagcaaaatag 44738192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6029311 - 6029469
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||| ||||  || ||||||||  | |||||||||||||||||||||||| |||    
T  6029311 cagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggac--aggacaaaaactgaaatttttgtccctcaccaaaccacaacac 6029408  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
    ||| ||||||||||||||||||||||| |||| ||||||||| ||||| ||| |||||||||    
T  6029409 aactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtc-ccccaaaaa 6029469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 45658984 - 45658825
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||  ||||||||||| |||||||||||||| ||||    
T  45658984 agtgtctgatttgtaaaactgtttcaagtacaggacaaactggagacaaaggac-aag-acaaaaactgatatttttgtcgctcaccaaaccacaacaca 45658887  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    || ||||||||||| ||||||||||   ||||||||||||||||||| ||| |||||||||||    
T  45658886 actttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtc-ccccaaaaatc 45658825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26764805 - 26764969
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||| || ||||| ||||||| || ||||||||||||||||||  || ||||||||  |||||||||||||||||| ||||||| |||    
T  26764805 cagtgtttgatttgtacaattgttttaggtacaagataaactggaggcaaaggac--aggacaaaaacttatatttttgtccctcaccgaaccacaacac 26764902  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||||||||||  |||| ||| || ||||||||||||    
T  26764903 aactttttgtcccacgtacaagttgtctaaaataccaaaataatatttcgtc-cctcaaaaatcgtat 26764969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 50304815 - 50304651
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   || ||| ||||||||  |||||||||||||||  ||||||||| |||    
T  50304815 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaac-aag-acaaaaactgatatttttgtccctctgcaaaccacagcac 50304718  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| |||||  |||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  50304717 aactttttgtctcacgtttaagttgtctaaaatatcaaaatagcattttgtc-ctccaaaaatcgtat 50304651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 49303364 - 49303527
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| ||| |||| ||| | |||||| ||||||||||||| ||||||||||||| |||    
T  49303364 cagtgtttgatttgtaaaactgtttcaggtataagacaaactggagacaagggac-aag-agaaaaactcatatttttgtccttcaccaaaccacagcac 49303461  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||  |||| ||| |||||||||||||| ||||||| |||||| ||||||||  |||||||||||||||    
T  49303462 aattttttatcctacgtacaagttgtctaaaatactaaaataacattttgt--ccccaaaaatcgtat 49303527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13994085 - 13994244
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| | ||| |||||| ||||||||| | |||  | ||||||||  | |||||||||||||||||||||||| |||    
T  13994085 cagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaact--ggacaaaaactgaaatttttgtccctcaccaaaccacaacac 13994182  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||| || |||||||||||| |||||||||||||||||||| ||  |||||||||||    
T  13994183 aactttttgtctcatgtacaagttgtctaaaataccaaaatagcatttcgt--ccccaaaaatc 13994244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3414863 - 3415023
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||| ||| |||||| |||||| |||||| | | ||||  || |||||||| ||||||||||||||||||||||| ||||||     
T  3414863 cagtgtttgatttgtaaaactattttaggtactggacaatctggagacgagggac--aggacaaaaactcatatttttgtccctcaccaaactacatcat 3414960  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||  |||| |||||||||| ||||||  |||||||||||||||||||||||| |||||||||||    
T  3414961 aattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtc-ccccaaaaatc 3415023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 51703174 - 51703322
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||| |||||||| |||||| |||||| ||||  || |||||||| ||||||||||| ||||||| ||||||| |||    
T  51703174 cagtgtttgatttgtaaaattgtttcaagtacaggataaactgaaggcaagggac--agaacaaaaactcatatttttgttcctcacc-aaccacaacac 51703270  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||| |||| |||||| ||||||| |||||| |||||||||    
T  51703271 aactttttgtcccacctacatgttgtctaaaatacaaaaataacattttgtc 51703322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 10384530 - 10384371
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||| | |||||||||||| ||||| |||| ||||||||| ||| |||||||| ||||||||||||| |||| |||||||| ||||    
T  10384530 agtgtttgatttgtaaaattatttcaggtacagtacaaattggatgcaaaggac-aag-acaaaaactcatatttttgtccttcactaaaccacagcaca 10384433  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    || ||||||||||||||||| || || ||||   ||||||| ||||| ||| |||||||||||    
T  10384432 actttttgtcccacgtacaaattatctaaaaattcaaaataacatttcgtc-ccccaaaaatc 10384371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 38087008 - 38087151
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||| |||||| |||||| |||||||| ||| |||| |||| ||||  |  |||||||| ||||||||||||| |||| ||||||||||||||    
T  38087008 gtgtttgatttataaaacagtttcaagtacaggataaaatggatgcaatggac--atgacaaaaactcatatttttgtccttcactaaaccacatcacaa 38087105  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    | |||||||||| |||||||||||| ||||  ||||||||||||||    
T  38087106 ctttttgtcccaagtacaagttgtctaaaaatccaaaatagcattt 38087151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 46155071 - 46154915
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcac-------caaacc 93  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||  | ||||  || |||||||| ||||||||||||||||||       |||||     
T  46155071 cagtgtttgatttgtaaaattatttcaggtactggacaaactggaggtgagggac--aggacaaaaactcatatttttgtccctcaccaaactacaaact 46154974  T
Q  94 acatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  46154973 acagcacaactttttgtcccacttacaagttgtctaaaataccaaaataacattttgtc 46154915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 50382411 - 50382562
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg---caaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatc 98  Q
    |||||||||||| ||||||||||||||| |||  ||||||||||||   ||| ||||  || ||||||||  | |||||||||| ||||||||||||| |    
T  50382411 agtgtttgatttttaaaactgtttcagggacataacaaactggaggaggcaatggac--aggacaaaaactgaaatttttgtccttcaccaaaccacaac 50382508  T
Q  99 acaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||| ||||||||||||||||||||||| |||| || |||||| |||||||||    
T  50382509 acaactttttgtcccacgtacaagttgtctaaaacacaaaaataacattttgtc 50382562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 25539961 - 25539855
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    ||||||||  |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||   ||||||||||||||||||| ||| |||||||    
T  25539961 acaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtc-ccccaaa 25539863  T
Q  161 aatcgtat 168  Q
    ||||||||    
T  25539862 aatcgtat 25539855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15539900 - 15540060
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||||||  |||  || |||||| |  | | |||||||  ||||||||||||| |||    
T  15539900 cagtgtttgatttgtaaaactgtttcaaggacagaacaaactggaggcaagagac--aggacaaaacctgaaacttttgtctttcaccaaaccacagcac 15539997  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| |||||||  ||||| |||||||| |||| ||||||||| ||||||||| |||||||||||    
T  15539998 aactttttgtcatacgtagaagttgtctaaaacaccaaaataacattttgtc-ccccaaaaatc 15540060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 38663227 - 38663132
Alignment:
Q  72 tatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||| || ||||||||||||    
T  38663227 tatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtc-cctcaaaaatcgtat 38663132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 6143999 - 6144154
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||| ||||  || ||||||||    |||||||||||||  ||||||||| ||||||    
T  6143999 tgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaagggac--aggacaaaaactgcaatttttgtccctcggcaaaccacaacacaac 6144096  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
     |||| ||||||||| |||||||| |||| || |||||| ||||||||| ||| ||||    
T  6144097 tttttctcccacgtagaagttgtctaaaacacaaaaataacattttgtcacccaaaaa 6144154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7837297 - 7837149
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||  |  |||||||   |  ||||||||| | |||||| ||||||||    
T  7837297 cagtgtttgatttgtaaaactgtttcaggaacatgacaaactagaggcaagggac--atgacaaaaattgaattttttgtccattaccaaatcacatcac 7837200  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgt 151  Q
    ||| ||||||| |||  |||||||||| |||||| |||||||| |||||||    
T  7837199 aactttttgtctcacagacaagttgtctaaaatatcaaaatagtattttgt 7837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 25343222 - 25343380
Alignment:
Q  5 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacg 104  Q
    ||||||||| |||||| ||||||  |||||||||||||||| ||||| |  || | | |||||||||||||||||||| |||| |||||| |  |||||     
T  25343222 gtttgatttataaaacagtttcatatacaggacaaactggatgcaaatggatagg-ataaaaacacatatttttgtccttcactaaaccatagtacaact 25343320  T
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcg 165  Q
    ||||||| ||||||||||||||| ||||  ||||||||| |||| ||| || |||||||||    
T  25343321 ttttgtcgcacgtacaagttgtccaaaaatccaaaatagtatttcgtc-cctcaaaaatcg 25343380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 20494927 - 20495050
Alignment:
Q  10 atttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttg 109  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||| |||||||                 ||    
T  20494927 atttgtaaaattgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccatcaccaa-----------------tg 20495007  T
Q  110 tcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  20495008 tcccacgtacaagttgtctaaaataccaaaatagcattttgtc 20495050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 46815816 - 46815888
Alignment:
Q  80 tccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||| |||||| |||||||| |||| |||||||||| ||||||| |||||||||||||| |||||||||    
T  46815816 tccctcactaaaccatatcacaaccttttttcccacgtactagttgtctaaaataccaaaataacattttgtc 46815888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 504405 - 504549
Alignment:
Q  5 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacg 104  Q
    |||||||||| |||| ||||| ||| ||| |||||||| ||||||| |||| |  |||||||||  | | ||||||| ||||| |||||| | |||||      
T  504405 gtttgatttgcaaaattgttttagggacaagacaaacttgaggcaagggacaa--cacaaaaactgaaaattttgtctctcactaaaccataacacaatt 504502  T
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgt 151  Q
    ||||||||||| || |||||||| ||||||||||| |||| ||||||    
T  504503 ttttgtcccacatagaagttgtctaaaataccaaagtagctttttgt 504549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 570549 - 570404
Alignment:
Q  5 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccaca--tcacaa 102  Q
    ||||||||| ||||| ||||||||  ||| || ||||||||||||||||   | | | ||||||| | ||||||||||||||||||||||||   |||||    
T  570549 gtttgatttataaaattgtttcagcgacaagataaactggaggcaaagggacatg-ataaaaacagaaatttttgtccctcaccaaaccacaatgcacaa 570451  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    | ||||||| | |||| |||||||| |||||| ||||||| ||||||    
T  570450 ctttttgtctcgcgtataagttgtctaaaatatcaaaataacatttt 570404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21071778 - 21071729
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 50  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  21071778 cagtgtttgatttgtaaaattgtttcaggtacatgacaaactggaggcaa 21071729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 8839058 - 8839015
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggagg 47  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  8839058 tgtttgatttgtaaaactgtttctggtacaagacaaactggagg 8839015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 34664012 - 34663942
Alignment:
Q  82 cctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||||| |||||| ||||| ||||| || || ||||| |||||| ||||||| |||||||||    
T  34664012 cctcaccaaaccacaacacaactttttgacccacttataaattgtctaaaatatcaaaataacattttgtc 34663942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 6771530 - 6771383
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||| ||||||||||| ||| ||| || ||| | ||| ||| |||| ||| ||||||||  | ||| ||||| ||||| ||| |||| |||||    
T  6771530 gtgtttgatttataaaactgttttagggacatgataaattagagacaagggac-aag-acaaaaactaaaattcttgtcactcactaaatcacaacacaa 6771433  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    | |||| |||||| ||||||||| | |||||| |||||||  ||||||||    
T  6771432 ctttttctcccacatacaagttgactaaaatatcaaaataatattttgtc 6771383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 23799605 - 23799670
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgt 126  Q
    ||||||||  |||||||||||||||||||||||||| |||||| |||| || |||||  |||||||    
T  23799605 acaaaaactgatatttttgtccctcaccaaaccacagcacaactttttatcgcacgtttaagttgt 23799670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7837538 - 7837490
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 49  Q
    ||||||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  7837538 cagtgtttgatttataaaactgtttcaggaacatgacaaactagaggca 7837490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 26733716 - 26733579
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||   | || ||||||||| ||| | | ||||  |  ||||||||  | ||| ||||||| ||| |||||| | ||||||    
T  26733716 tgtttgatttgtaaaactgtttttaggaccggacaaactagagacgatggac--atgacaaaaactgaaattcttgtcccccactaaaccataacacaac 26733619  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
     ||||| | || |||||||||||| |||||||||||||||    
T  26733618 tttttgcctcatgtacaagttgtctaaaataccaaaatag 26733579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38663271 - 38663228
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactgg 44  Q
    ||||||||||||||||||||||||||| | |||||| |||||||    
T  38663271 cagtgtttgatttgtaaaactgtttcaaggacaggataaactgg 38663228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 40610809 - 40610739
Alignment:
Q  80 tccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttg 150  Q
    ||||||| ||||||||| |||||| |||| || ||  || |||||||| |||||||||||||| |||||||    
T  40610809 tccctcatcaaaccacaacacaactttttatcacatatataagttgtctaaaataccaaaataacattttg 40610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 46447737 - 46447679
Alignment:
Q  94 acatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||||| |||||| ||||||||||||| || |||||| ||||||||  |||||||    
T  46447737 acatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtcttttgtc 46447679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 16643272 - 16643337
Alignment:
Q  83 ctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||||||||| |||  |||||| ||||||||||| |||| |||||| ||||||| |||||| |||||    
T  16643272 ctcaccaaatcacgacacaactttttgtcccacatacaggttgtctaaaatacaaaaataccattt 16643337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 5e-61; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 37664233 - 37664384
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  37664233 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 37664330  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgc 154  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37664331 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcgc 37664384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4052635 - 4052471
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  4052635 cagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 4052538  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  4052537 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 4052471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 8673005 - 8673154
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  8673005 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 8673102  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8673103 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 8673154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29563176 - 29563340
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  29563176 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 29563273  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||    
T  29563274 aactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtc-cctcaaaaatcgtat 29563340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 30542972 - 30543136
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  30542972 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaatggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 30543069  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||| ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  30543070 aacttttcgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-ccccaaaaatcgtat 30543136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34063283 - 34063119
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||| |||||||||| |||    
T  34063283 cagtgtttgatttgtaaaactctttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcgccaaaccacagcac 34063186  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  34063185 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 34063119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 41709932 - 41709768
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  41709932 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaatgac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 41709835  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||| ||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  41709834 aactttttgtccaacgtacaagttatctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 41709768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29672273 - 29672437
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  29672273 cagtgtttgattcgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 29672370  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  29672371 aactttttgtcccacgtacaagttatctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 29672437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34101663 - 34101499
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |  ||||||||| ||||||||||||||||||||||||||| ||     
T  34101663 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaa--cacaaaaactcatatttttgtccctcaccaaaccacaacat 34101566  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| | |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  34101565 aacttttttttccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 34101499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 45446610 - 45446446
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || | |||||| ||||||||||| ||||||||||||||| |||    
T  45446610 cagtgtttgatttgtaaaactgtttcaggtacacgacaaactggaggcaagggac--aggataaaaactcatatttttgttcctcaccaaaccacagcac 45446513  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  45446512 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 45446446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 30501300 - 30501136
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||||||||||||||||||||||||||||||| |||    
T  30501300 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac--aggacaaaaacacatatttttgtccctcaccaaaccacagcac 30501203  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||| | ||||||| |||||| ||||| |  ||||||||||||||||    
T  30501202 aactttttgtcccacgtacaagttgcctaaaatacaaaaataacatttcg-agccccaaaaatcgtat 30501136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12753275 - 12753439
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||| ||||||||||||||| |||    
T  12753275 cagtgtttgatttgtaagactgtttcaggtacaggacaaactgaaggcaaatgac-aag-acaaaaactcatatttttgttcctcaccaaaccacaacac 12753372  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  12753373 aactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtc-ccccaaaaatcgtat 12753439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 27104111 - 27103965
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||  ||||||    
T  27104111 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccactgcacaac 27104014  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  27104013 tttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc 27103965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3251606 - 3251770
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||  |||  || ||||||||  ||||||||||||||||||||||||||||||    
T  3251606 cagtgtttgatttataaaactgtttcaggtacaggacaaactggaggcaagcgac--agaacaaaaacttatatttttgtccctcaccaaaccacatcac 3251703  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| ||| |||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  3251704 aactttttatcctacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 3251770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 6386731 - 6386567
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||   || |||||||| ||||||||||||||||||||||||||| |||    
T  6386731 cagtgtttgatttataaaactgtttcaggtataggacaaactggaggtaaaagat--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 6386634  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  6386633 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 6386567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10467219 - 10467055
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||| ||||||||  |||||||||| ||||| ||||||||| |||    
T  10467219 cagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagac-aag-acaaaaactgatatttttgttcctcagcaaaccacaacac 10467122  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  10467121 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 10467055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14004994 - 14005143
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||| ||||||||||||| |||    
T  14004994 cagtatttgatttgtaaaactgtttgaggtacaggacaaactggaggcaagggac-aag-acaaaaactcatatttttgtccatcaccaaaccacaacac 14005091  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  14005092 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 14005143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 37618344 - 37618506
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||  || ||||||||  |||||||||||||||||||||||||| |||||    
T  37618344 gtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaaggac--aggacaaaaactgatatttttgtccctcaccaaaccacaacacaa 37618441  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    | ||||||| ||||||||||||||   ||||||||||||||||||| ||| |||||||||| ||||    
T  37618442 ctttttgtctcacgtacaagttgttttaaataccaaaatagcatttcgtc-ccccaaaaattgtat 37618506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 7591397 - 7591561
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||| ||||| ||||||||| |||    
T  7591397 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtgcctcagcaaaccacaacac 7591494  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| |||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  7591495 aactttttgtcacacgtataagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 7591561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31513533 - 31513682
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  31513533 cagtgtttgatttgtaaaattgtttcaggtagatgacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 31513630  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||| | |||||||||||| ||||||||||||||||||||||||    
T  31513631 aactttttgtcctaggtacaagttgtctaaaataccaaaatagcattttgtc 31513682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32019951 - 32020115
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||    || |||||||| ||||||||| ||||||||||||||||| |||    
T  32019951 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaaggggt--aggacaaaaactcatatttttatccctcaccaaaccacagcac 32020048  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||| |||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||    
T  32020049 aactttttgttccacgtacaagttgtctaaaataccaaaatagtattttgtc-cctcaaaaatcgtat 32020115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 40389195 - 40389031
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||  |||||||| || |||||||||||||| |||    
T  40389195 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac--aggacaaaaactgatatttttatctctcaccaaaccacagcac 40389098  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||| ||||||||||   |||| |||||||||||||| ||| |||||||||||||||    
T  40389097 aactttttgtcccacatacaagttgttttaaatgccaaaatagcatttcgtc-ccccaaaaatcgtat 40389031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 13406886 - 13407049
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||| | ||  || |||||||| ||||||||||||||||||||||||||| || |    
T  13406886 agtgtttaatttgtaaaactgtttcaggtatatgacaaactggaggcaaggaac--agaacaaaaactcatatttttgtccctcaccaaaccacagcata 13406983  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |  ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  13406984 attttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgt-gccccaaaaatcgtat 13407049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17805846 - 17805681
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| |||| ||| |||||||| ||||||||||| ||||||||||||| | |||    
T  17805846 cagtgtttgatttgtaaaactgtttcaagtacaggacaaactagaggcaagggac-aag-acaaaaactcatatttttgttcctcaccaaaccaaagcac 17805749  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||  |||||| ||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||    
T  17805748 aactctttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcctcccaaaaatcgtat 17805681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5968814 - 5968978
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||  || |||||||| ||||||||||||| ||||||||||||| |||    
T  5968814 cagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaagggac--aggacaaaaactcatatttttgtccttcaccaaaccacagcac 5968911  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||||||||| ||||| |||||||||||||| ||||||||| || ||||||||||||    
T  5968912 aactttttatcccacgtacaaattgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 5968978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15001621 - 15001476
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||  |||  || ||||||||  | |||||||||||||||||||||||| |||    
T  15001621 cagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaatagac--agaacaaaaactgaaatttttgtccctcaccaaaccacaacac 15001524  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| |||||||||||||||||||| || ||||||||||||||||||||    
T  15001523 aactttttgtcccacgtacaagttatctaaaataccaaaatagcattt 15001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 37862011 - 37861866
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||  || |||||||| ||||||||| |||||||||||||||||||| |||    
T  37862011 tgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgac--aggacaaaaactcatatttttatccctcaccaaaccacatcataac 37861914  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgt 151  Q
      ||||||| |||||||||||||| |||||||||||||||||||||||    
T  37861913 tatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgt 37861866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39643038 - 39642893
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| | ||||||  |||||||||||||||||||||||||| |||    
T  39643038 cagtgtttgatttttaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-ataaaaactgatatttttgtccctcaccaaaccacaacac 39642941  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  39642940 aactttctgtcccacgtacaggttgtctaaaataccaaaatagcattt 39642893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 25478398 - 25478249
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||  || | |||||| ||||||||||||||||| |||| |||| |||    
T  25478398 cagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagacaagggac--aggaaaaaaactcatatttttgtccctcatcaaatcacagcac 25478301  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  25478300 aactttttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtc 25478249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 41548773 - 41548609
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||  |||  || ||||||||  |||||||||| ||||| || |||||| |||    
T  41548773 cagtgtttgatttgtaaaactgtttcagatacatgacaaactggaggcaagagac--aggacaaaaactgatatttttgtacctcagcagaccacaacac 41548676  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  41548675 aactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtc-ccccaaaaatcgtat 41548609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22999413 - 22999248
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||||||||| ||||||| | ||     
T  22999413 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtccctcagcaaaccatagcaa 22999316  T
Q  101 aac-gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||  ||||||||||||||||| ||||| |||||| ||||||||||||||||| | |||||||||||||    
T  22999315 aacttttttgtcccacgtacaacttgtctaaaatatcaaaatagcattttgtc-ctccaaaaatcgtat 22999248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 7394764 - 7394913
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||  |||||||||||||||||| |||||||| ||||||| ||||  |  |||||||| ||||||||||||||||||||||||| | |||    
T  7394764 cagtgtttgatttacaaaactgtttcaggtacatgacaaactagaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccataacac 7394861  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  7394862 aactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtc 7394913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 29611008 - 29611163
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| ||||  || ||||||||  | ||||||||||||| |||||||||| ||||||    
T  29611008 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggac--aggacaaaaactgaaatttttgtccctcgccaaaccacaacacaac 29611105  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
     |||||||||||||| |||||||| |||| ||||||||||||||| ||| |||||||||    
T  29611106 tttttgtcccacgtaaaagttgtctaaaacaccaaaatagcatttcgtc-ccccaaaaa 29611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 45114210 - 45114046
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||  || |||| |||   || |||||||| |||||||||||||||||||||||||||  ||    
T  45114210 cagtgtttgatttgtaaaactgtttcaggtacagaacaaacgagatgcaagggag--aggacaaaaactcatatttttgtccctcaccaaaccacagtac 45114113  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||  | |||||||||||| |||||||||||||||||||| ||| | |||||||||||||    
T  45114112 aactttttgtcataggtacaagttgtctaaaataccaaaatagcatttcgtc-ctccaaaaatcgtat 45114046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35225817 - 35225659
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||  || ||||||||    ||||||||||||| ||||||||||||||    
T  35225817 cagtgtttggtttgtaaaacagtttcagggacaggacaaactggaggcaagggac--aggacaaaaactgcaatttttgtccctcgccaaaccacatcac 35225720  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| ||||||| || |||||||||||| ||||||| |||||||||||| ||| ||| ||||    
T  35225719 aactttttgtcacaagtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaaaa 35225659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 32303593 - 32303684
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32303593 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 32303684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 21272781 - 21272690
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  21272781 acaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtc 21272690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 31732161 - 31732055
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| |||||||||||||||||||||||||||  ||||| ||||||| ||| ||||||||||| |||||||||||||||||||||||| || ||||    
T  31732161 acaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaataccaaaatagcattttgtc-cctcaaa 31732063  T
Q  161 aatcgtat 168  Q
    ||||||||    
T  31732062 aatcgtat 31732055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16485759 - 16485917
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||  |||||||| ||| |||||| || |||||||||||  || ||||||||    ||||||||||||| |||||||||| |||    
T  16485759 cagtgtttgatttgtaaaatagtttcagggacatgacaaattgaaggcaaaggac--agaacaaaaactgcaatttttgtccctcgccaaaccacagcac 16485856  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| |||||||| ||||| ||||| || ||||||| |||||||||||| ||| ||| ||||    
T  16485857 aactttttgtcctacgtataagttttctaaaatacaaaaatagcatttcgtcacccaaaaa 16485917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37474855 - 37474762
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccaca 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||||||||| |||||||||    
T  37474855 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaacttatatttttgtccctcagcaaaccaca 37474762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 17520747 - 17520594
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||| ||||| |||| || || ||| ||||||||| ||||  ||  |||||||  ||| |||||||||||||||||||||| |||||    
T  17520747 gtgtttgatttgtaaaagtgttttaggtgcatgataaaatggaggcaagggac--agggcaaaaacttata-ttttgtccctcaccaaaccacaacacaa 17520651  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    | ||||||||||| ||||||||||        |||||||||||||||||| |||||||||||||||    
T  17520650 ctttttgtcccacatacaagttgt--------ccaaaatagcattttgtc-ccccaaaaatcgtat 17520594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 6460344 - 6460267
Alignment:
Q  76 tttgtccctcaccaaaccacatcacaacgtttt-gtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||| ||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||||||| |||||||||    
T  6460344 tttgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattttgtc 6460267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 16595103 - 16595263
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||  |||||| || |||| |||||||| |||||| ||||  || |||||||||   | ||||||||||| | || ||||| ||||||    
T  16595103 tgtttgatttgtaaat-tgtttctgggacagaacaaactgtaggcaagggac--aggacaaaaacatgaagttttgtccctcgctaatccacaacacaac 16595199  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     |||||||||||||||||||| || ||||||| |||||||| ||||||  | |||||||||||||    
T  16595200 tttttgtcccacgtacaagttatctaaaatacaaaaatagctttttgt-tcaccaaaaatcgtat 16595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 10320232 - 10320376
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||| |||| ||| ||| |||||||| ||| ||| |||| ||    ||||||| | ||| || ||||||||||||||||| ||||||    
T  10320232 tgtttgatttgtaaaaccgttttagggacatgacaaacttgag-caagggacgaaa---aaaaacagaaattcttatccctcaccaaaccacaacacaac 10320327  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     ||||  | ||||||||||||||| |||||| ||||||| |||||||||    
T  10320328 tttttaccacacgtacaagttgtctaaaatatcaaaataacattttgtc 10320376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 10932819 - 10932742
Alignment:
Q  75 ttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||| ||||||||||||||| ||| || |||||||||| ||||| |||||||||||||||  |||||||    
T  10932819 ttttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtc 10932742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 27109559 - 27109651
Alignment:
Q  71 atatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    |||||||||| ||| ||||||||||| |||||| ||||||||| ||||||| ||||  |||||||||||||| ||||| ||| |||||||||||    
T  27109559 atatttttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaataccaaaataacatttcgtc-ccccaaaaatc 27109651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 10656636 - 10656785
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| ||||||||||||| || ||| ||  ||| |||||||| |||||||| |||  || ||||||||  |  ||||||||| |||| |||||||| |||    
T  10656636 cagtatttgatttgtaaatcttttttagagacatgacaaactagaggcaaaagac--aggacaaaaactgaattttttgtccttcacaaaaccacaacac 10656733  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||| ||||||||| ||||| |||||| ||||||| || ||||||    
T  10656734 aactttttgtctcacgtacaaattgtctaaaatatcaaaataacaatttgtc 10656785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 22756364 - 22756501
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||| || | |||||||| | |||||||  ||| ||| ||||||||| | |||||| |||||||  | |||||| ||||||    
T  22756364 tgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagac-aag-acaaaaacataaatttttatccctcattataccacaacacaac 22756461  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
     ||||||  |||||||||||| || ||||||| |||||||    
T  22756462 tttttgtatcacgtacaagttatctaaaatacaaaaatag 22756501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 54322 - 54193
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||| |  ||| ||||| | |||  ||| ||||  |  ||||||||| | |||||||||| |  | |||||||||||||||    
T  54322 tgtttgatttgtaaaactgtttctgagacatgacaatccggacacaagggac--atgacaaaaacataaatttttgtcctttgctaaaccacatcacaac 54225  T
Q  104 gttttgtcccacgtacaagttgtcgaaaatac 135  Q
     ||||||||||| |||||||| ||||||||||    
T  54224 tttttgtcccacatacaagttatcgaaaatac 54193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32303558 - 32303597
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32303558 cagtgtttgatttgtaaaactgtttcaggtacaggacaaa 32303597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 36426201 - 36426346
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||| || |||||  ||| ||||| || ||||||| ||| |||| ||||||||  | | |||||||  | || |||||||| ||||     
T  36426201 gtgtttgatttgtaaaattggttcag--acacgacaatcttgaggcaaggga-taag-acaaaaactaaaaattttgtcatttactaaaccacaacacat 36426296  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    | ||||||| ||| ||||||||||| |||||||||||||||  |||||||    
T  36426297 ctttttgtctcacatacaagttgtctaaaataccaaaatagtcttttgtc 36426346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 14959027 - 14958975
Alignment:
Q  89 aaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaata 142  Q
    |||||||| |||||| |||||||||||||||||| |||| |||||| |||||||    
T  14959027 aaaccacaacacaactttttgtcccacgtacaag-tgtctaaaatatcaaaata 14958975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21272822 - 21272789
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacag 34  Q
    |||||||||||||||||||||||||||| |||||    
T  21272822 cagtgtttgatttgtaaaactgtttcagatacag 21272789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 9e-60; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10932493 - 10932657
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||| ||| |||    
T  10932493 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaactacaacac 10932590  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  10932591 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 10932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 47953349 - 47953185
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  47953349 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacagcac 47953252  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  47953251 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 47953185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 11321824 - 11321985
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||||||    
T  11321824 tgtttgatttgtaaaactgattcaggtacaggacaaactggaggcaacggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcacaac 11321921  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  11321922 tttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 11321985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 40753311 - 40753150
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||| |||| ||||||    
T  40753311 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaatcacagcacaac 40753214  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  40753213 tttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 40753150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 36769505 - 36769654
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  36769505 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 36769602  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36769603 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 36769654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 18386683 - 18386520
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||| | ||||||||||||||||||||||||||| |||    
T  18386683 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--aggacaaaa-ctcatatttttgtccctcaccaaaccacagcac 18386587  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  18386586 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 18386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21785030 - 21784866
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  21785030 cagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggcaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 21784933  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  21784932 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-ctccaaaaatcgtat 21784866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 26994161 - 26994310
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||| | ||||||||||||||||||||||||||| |||    
T  26994161 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--aggacaaaatctcatatttttgtccctcaccaaaccacagcac 26994258  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26994259 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 26994310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 43158622 - 43158786
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||| ||||||||||| |||    
T  43158622 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtcccttaccaaaccacaacac 43158719  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||| | ||||||||||||||||| || ||||||||||||    
T  43158720 aactttttgtcccacgtacaagttgtctaaaacatcaaaatagcattttgtc-cctcaaaaatcgtat 43158786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44748854 - 44748690
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||  || |||||||| || ||||||||||||||||||||||||  ||    
T  44748854 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggac--agaacaaaaactcaaatttttgtccctcaccaaaccacaatac 44748757  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  44748756 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaaaaatcgtat 44748690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3922639 - 3922803
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||| ||||||||||||||| |||    
T  3922639 cagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-acaaaaactcatatttttgttcctcaccaaaccacagcac 3922736  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  3922737 aactttttgtcccacgtacaagttatctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 3922803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 41211136 - 41211282
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  41211136 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 41211233  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  41211234 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 41211282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26371745 - 26371909
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||| |||| |||    
T  26371745 cagtgtttgatttgcaaaactatttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaatcacagcac 26371842  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||| |||||||||||||||| || ||||||||||||    
T  26371843 aactttttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtc-cctcaaaaatcgtat 26371909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 329627 - 329469
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||  | ||||||||||||||||||||||||||||||    
T  329627 gtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggac-aag-acaaaaactgaaatttttgtccctcaccaaaccacatcacaa 329530  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    | ||||||||||||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  329529 ctttttgtcccacgtacaagttgcctaaaacaccaaaatagcattttgtc-ccccaaaaatc 329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 1870294 - 1870129
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  1870294 cagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 1870197  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||| ||||||||| |   |||||||||||    
T  1870196 aactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctaaaaaaatcgtat 1870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29661482 - 29661318
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  29661482 cagtgtttgatttgtagaactgattcaggtacatgacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 29661385  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| ||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  29661384 aactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtc-ccacaaaaatcgtat 29661318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 43189178 - 43189343
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  43189178 cagtgtttgatttataaaaatgtttcaggtacaggacaaactggaggtaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacaacac 43189275  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||    
T  43189276 aactttttatcccacgtacaagttgtctagaataccaaaatagtattttgtccccccaaaaatcgtat 43189343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47316634 - 47316798
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  47316634 cagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 47316731  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||| | ||||||||| ||| |||||||||||||||||||| || ||||||||||||    
T  47316732 aactttttgtctcacatgcaagttgtctaaattaccaaaatagcattttgtc-cctcaaaaatcgtat 47316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 18470840 - 18470694
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||  || |||||||| |||||||||||| |||||||||||||| || |    
T  18470840 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa--gac--aggacaaaaactcatatttttgtctctcaccaaaccacagcata 18470745  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    || ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  18470744 actttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 18470694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38301501 - 38301338
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||||||||| ||||||||| |||    
T  38301501 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtccctcagcaaaccacaacac 38301404  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||| |||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  38301403 aactttttgtcccacg-acaagttgtctaaaatatcaaaataacattttgtc-ccccaaaaatcgtat 38301338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 168
Target Start/End: Original strand, 30849188 - 30849346
Alignment:
Q  7 ttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgtt 106  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||||| ||    
T  30849188 ttgatttgtaaaactgttttaggtacaggacaaactggtggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttt 30849285  T
Q  107 ttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||  ||||||||||  |||||||||||||| ||||||||| |||||||||||||||    
T  30849286 ttgtcccatatacaagttgtataaaataccaaaataacattttgtc-ccccaaaaatcgtat 30849346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 32873708 - 32873869
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||| ||||  || |||||||| ||||||||||||| ||||||||||||| ||||||    
T  32873708 tgtttgatttgtaaaattgtttcaggtaccggataaactggaggcaagggac--aggacaaaaactcatatttttgtccttcaccaaaccacaacacaac 32873805  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||| |||||||||||||||  ||||||||||||||||||||||| || ||||||||||||    
T  32873806 tttttgtctcacgtacaagttgtctgaaataccaaaatagcattttgtc-cctcaaaaatcgtat 32873869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 46633851 - 46633692
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | | |||       |||||| ||||||||| ||||||||||||||||| |||    
T  46633851 cagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggaacaagac-------aaaaactcatatttttatccctcaccaaaccacagcac 46633759  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  46633758 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 46633692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 34295347 - 34295500
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||  |||||||||||||||| ||||||||| |||    
T  34295347 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag---------acaaaaactgatatttttgtccctcagcaaaccacagcac 34295437  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  34295438 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatc 34295500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 30598947 - 30599108
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||  || |||||| | ||||||||||||||||| ||||||||| ||||||    
T  30598947 tgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaagctcatatttttgtccctcatcaaaccacaacacaac 30599044  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||| || |||||| || || |||||||||||||| ||||||||| ||| |||||||||||    
T  30599045 tttttgtctcaagtacaaattatctaaaataccaaaataacattttgtc-ccctaaaaatcgtat 30599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 43368360 - 43368202
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||   | ||||||||  |||||||||| ||||| ||||||||| |||    
T  43368360 cagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagagacg--ggacaaaaactgatatttttgtgcctcagcaaaccacagcac 43368263  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| |||||||| |||||||||||||| |||||| ||||||||||||||||| | ||||||    
T  43368262 aactttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgtccctccaaaa 43368202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20127448 - 20127284
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||  || |||||| |  |||||||||| ||||| |||||||||||||    
T  20127448 cagtgtttgatttttaaaactatttcaggtacaggacaaactggaggcaagggac--aggacaaaagctgatatttttgttcctcagcaaaccacatcac 20127351  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||| ||||  |||||||||||||  ||||| ||| |||||||||||||||    
T  20127350 aactttttgtcccacgtacaatttgtgtaaaataccaaaatgacatttcgtc-ccccaaaaatcgtat 20127284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 1363795 - 1363650
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||  |  |||||| |  |||||||||||||||| |||||||||||||    
T  1363795 cagtgtttgatttgtaaaattgtttcatgtacaggacaaactggaggcaagggac--atgacaaaagctgatatttttgtccctcatcaaaccacatcac 1363698  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||| |||||||| |||||| ||||||| ||||||||||||    
T  1363697 aactttttgtctcacgtacaggttgtcaaaaatacaaaaatagcattt 1363650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 23349227 - 23349390
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||| |||||||||| ||||| ||||| |||||||||||||||| ||||  || ||||||||  |||||||||||||||||||||||||| |||    
T  23349227 cagtgtttgaattgtaaaactatttcaagtacatgacaaactggaggcaagggac--agaacaaaaactgatatttttgtccctcaccaaaccacaacac 23349324  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgta 167  Q
    ||| ||||||||||| ||||||||||| ||||||| |||||  ||||| ||| |||||| |||||||    
T  23349325 aactttttgtcccacatacaagttgtctaaaatactaaaatgacatttcgtc-ccccaacaatcgta 23349390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 9913681 - 9913520
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||  || |||||||   ||| ||||||| ||||||||||||||||||||    
T  9913681 gtgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagggac--aggacaaaaattgata-ttttgtcgctcaccaaaccacatcacaa 9913585  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    | |||| ||||||||||| |||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  9913584 ctttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtc-ccccaaaaatcgtat 9913520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 9927369 - 9927208
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||  || |||||||   ||| ||||||| ||||||||||||||||||||    
T  9927369 gtgtttgatttgtaaaactatttcaggtacaggataaactagaggcaagggac--aggacaaaaattgata-ttttgtcgctcaccaaaccacatcacaa 9927273  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    | |||| ||||||||||| |||||| |||||||||||||| ||||| ||| |||||||||||||||    
T  9927272 ctttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtc-ccccaaaaatcgtat 9927208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 11250776 - 11250632
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||  || |||||||  ||||||||||||||||||||||||||| |||    
T  11250776 cagtgtttcatttgtaaaattgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaaatcatatttttgtccctcaccaaaccacaacac 11250679  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||      ||||||| ||||||||||| ||||||||||||    
T  11250678 aactttttgtccca-----tagttgtctaaaataccaaactagcattttgtc 11250632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 48894876 - 48894716
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||  || |||||||| ||||||||||||  |||| ||||||||||||    
T  48894876 cagtgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaagggac--aggacaaaaactcatatttttgtcattcactaaaccacatcac 48894779  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||||||||||||| |  || ||||  |||||||| ||||||||| |||||||||||    
T  48894778 aactttttgtcccacgtacaaatcatctaaaaatccaaaataacattttgtc-ccccaaaaatc 48894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 43213862 - 43214006
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||| |||| ||| | |||| |  |||||||||||| ||||||||||||| ||||    
T  43213862 agtgtttgatttgtaaaactgttttcagtacaggacaaactgaaggcaagggac-aag-ataaaagctgatatttttgtccttcaccaaaccacaacaca 43213959  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  43213960 actttttgtcccacatacaagttgtcaaaaataccaaaatagcattt 43214006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 21133528 - 21133367
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||| |||| ||| ||||||||  ||||| || |||||||  |||||||||||||||    
T  21133528 tgtttaatttgtaaaactgtttcaagtacaggacaaactgaaggcaagggac-aag-acaaaaactgatattattttccctcaataaaccacatcacaac 21133431  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||| ||| ||||| ||||| |||||||||||||||||||| |||  ||||||||||||||    
T  21133430 tttttgtctcacatacaaattgtctaaaataccaaaatagcatttcgtc-tcccaaaaatcgtat 21133367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 22724471 - 22724625
Alignment:
Q  5 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacg 104  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||| || | |||||| |    |||||||||||||||||||||||| | ||||     
T  22724471 gtttgatttgtaaaacagtttcagggacaggacaaactggaggcaaggga-tatg-acaaaagctgcaatttttgtccctcaccaaaccacagcgcaact 22724568  T
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    || |||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||    
T  22724569 ttatgtcccacgtacaagttgtctaaaatacaaaaatagcatttcgtcgcccaaaaa 22724625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16963297 - 16963174
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||   || |||||||| ||||||||||||||| | |||||||||  ||    
T  16963297 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggat--aggacaaaaactcatatttttgtcccttatcaaaccacaatac 16963200  T
Q  101 aacgttttgtcccacgtacaagttgt 126  Q
    ||| ||||||||||||||||||||||    
T  16963199 aactttttgtcccacgtacaagttgt 16963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 37967131 - 37966988
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||| |||| ||| |||||||| ||||||||||||  |||| | ||||||||||||    
T  37967131 gtgtttgatttgtaaaactgtttcaggtacatgacaaattggatgcaagggac-aag-acaaaaacccatatttttgtctttcactagaccacatcacaa 37967034  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    | |||||| ||||||||||||| || ||||  ||||||||||||||    
T  37967033 ctttttgttccacgtacaagttatctaaaaatccaaaatagcattt 37966988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 3891994 - 3892110
Alignment:
Q  33 aggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaa 132  Q
    |||||||||||||||||| ||||  || |||||||| |||||||||||| ||||||||| |||| |||||| |||||||| |||||||||||||| | ||    
T  3891994 aggacaaactggaggcaagggac--aggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaa 3892091  T
Q  133 taccaaaatagcattttgt 151  Q
    |||||||||||||||||||    
T  3892092 taccaaaatagcattttgt 3892110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26910346 - 26910486
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||  || | ||||||    ||||||||||||| |||||||||| |||    
T  26910346 cagtgtttgatttgtaaaacagtttcagggacagggcaaactggaggcaagggac--aggataaaaactgcaatttttgtccctcgccaaaccacaacac 26910443  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
    ||| ||||||| ||||||||||||||| ||||||| |||||||    
T  26910444 aactttttgtcacacgtacaagttgtcaaaaatacaaaaatag 26910486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 26652957 - 26652861
Alignment:
Q  71 atatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  26652957 atatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-cgccaaaaatcgtat 26652861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 34117551 - 34117447
Alignment:
Q  63 aaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||| ||| |||||||||||| ||||| |||||||||||||| ||| |||||||||    
T  34117551 aaaaactcatatttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttcgtc-ccccaaaaa 34117453  T
Q  163 tcgtat 168  Q
    ||||||    
T  34117452 tcgtat 34117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11822382 - 11822268
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||  |  |||||||| ||||||||||||| |||| |||||||| |||    
T  11822382 cagtgtttgattcgtaaaactgtttgaggtacaggacaaactggatgcaagggac--atgacaaaaactcatatttttgtccttcactaaaccacaacac 11822285  T
Q  101 aacgttttgtcccacgt 117  Q
    ||| |||||||||||||    
T  11822284 aactttttgtcccacgt 11822268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34519667 - 34519527
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||| || ||||||||| |||||||| ||| ||||| |||||||||| ||||  || ||||||||    ||||||||||||| |||||||||| |||    
T  34519667 cagtgttcgaattgtaaaacagtttcagggacatgacaagctggaggcaagggac--aggacaaaaactgcaatttttgtccctcgccaaaccacaacac 34519570  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
    ||| |||||||||| |||||||||||| ||||||| |||||||    
T  34519569 aactttttgtcccaggtacaagttgtctaaaatacaaaaatag 34519527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17237235 - 17237075
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| | |||||||||||| |||||||||| |||| | ||  |  |||||||| ||||||||||||  |||| |||||||| |||    
T  17237235 cagtgtttgatttgtaaaattatttcaggtacagtacaaactggatgcaaggaac--atgacaaaaactcatatttttgtcattcactaaaccacaacac 17237138  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||| ||||||||| || || ||||  |||||||| ||||| ||| |||||||||||    
T  17237137 aactttttgtctcacgtacaaattatctaaaaatccaaaataacatttcgtc-ccccaaaaatc 17237075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 41665581 - 41665669
Alignment:
Q  73 atttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||| ||| ||| ||||    
T  41665581 atttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaaaa 41665669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 46408987 - 46408899
Alignment:
Q  64 aaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||| |||||| ||||||||||| |||||    
T  46408987 aaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccgacatacaagttgtctaaaatatcaaaatagcatattgtc 46408899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22723968 - 22724126
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| |||||||| || ||||||||| |||| || ||||  || ||||||||    || ||||||| || |||||||||| | |    
T  22723968 cagtgtttgatttgtaaaacagtttcagggaccggacaaactcgaggtaagggac--aggacaaaaactgcaatgtttgtccatcgccaaaccacaacgc 22724065  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| |||| |||||||||||||||||  ||||||| |||||||||||| ||| ||| ||||    
T  22724066 aactttttatcccacgtacaagttgtataaaatacaaaaatagcatttcgtcacccaaaaa 22724126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 48445677 - 48445520
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||| |||||||||||||||| ||| |||| ||||||||||||||| ||||  |  ||||||||  | |||||||||| |||||||| ||||  |||||    
T  48445677 tgtttaatttgtaaaactgtttgagggacagaacaaactggaggcaagggac--atgacaaaaactgaaatttttgtccttcaccaaatcacaggacaac 48445580  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
     ||||||| | | ||||||||||| |||| || |||||| ||||||||| |||||||||||    
T  48445579 tttttgtctcgcatacaagttgtctaaaacacgaaaataacattttgtc-ccccaaaaatc 48445520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 46448581 - 46448725
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||| |||||||||||| | |||||||||| |||| ||||  |  | |||||| ||||||||||||| |||| |||||||| ||||    
T  46448581 agtgtttgatttgtaaaattgtttcaggtacggtacaaactggatgcaagggac--atgataaaaactcatatttttgtccgtcactaaaccacagcaca 46448678  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    || |||||||||| ||| || || || ||||  |||||||| |||||    
T  46448679 actttttgtcccatgtataaattatctaaaaatccaaaataacattt 46448725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 47947824 - 47947755
Alignment:
Q  98 cacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 47947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 48699483 - 48699417
Alignment:
Q  77 ttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
    ||||||||||| |||||||| ||||||  ||||| |||||||||||||||| |||||||||||||||    
T  48699483 ttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatag 48699417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 22631829 - 22631733
Alignment:
Q  71 atatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||||||||| ||||||||||||| || ||| ||||||   |||||||||||||| |||||||||||||   |||| ||| |||||||||||||||    
T  22631829 atatttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtc-ccccaaaaatcgtat 22631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26700636 - 26700587
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 50  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  26700636 cagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaa 26700587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 42332137 - 42332072
Alignment:
Q  84 tcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||||  ||||| ||||||| ||||||    
T  42332137 tcaccaaaccacatcacaactttttgtctcacatacaaattgtcttaaatatcaaaataacatttt 42332072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 2049107 - 2048970
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||| |||| |||||  || || ||||||||| ||||||| | ||  |  ||||||| | | |||||||||| |||| |||||||| || |||    
T  2049107 tgtttgatttgaaaaattgtttttgggacgggacaaactagaggcaaggaacata--acaaaaatataaatttttgtccatcactaaaccacaacaaaac 2049010  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
     |||||||||||||| ||||| |  ||||||| |||||||    
T  2049009 attttgtcccacgtagaagttataaaaaatacaaaaatag 2048970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 16963149 - 16963103
Alignment:
Q  121 agttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||||    
T  16963149 agttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 16963103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 44668865 - 44668802
Alignment:
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||| ||| ||||| || || |||||||||||||||| ||||||||  |||||||||||||    
T  44668865 ttttgtctcacatacaaattttcaaaaataccaaaatagctttttgtcgatccaaaaatcgtat 44668802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 8453344 - 8453285
Alignment:
Q  92 ccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||||||| |||||| || ||||||| ||||| |||||| ||||||| |||||||||    
T  8453344 ccacatcacaactttttgt-cctcgtacaaattgtctaaaatatcaaaataacattttgtc 8453285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 29372785 - 29372845
Alignment:
Q  73 atttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaat 133  Q
    |||||||||| |||| |||||||| |||||| || ||| ||| |||||||||||| |||||    
T  29372785 atttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaat 29372845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 35645530 - 35645466
Alignment:
Q  79 gtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
    ||||||||| |||||||| |||||| |||| ||  |||||||||||||| ||||||  |||||||    
T  35645530 gtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaataataaaatag 35645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 9e-60; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 20802459 - 20802608
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || |||||||| |||||||||||||||||||||||||||||||    
T  20802459 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 20802556  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20802557 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 20802608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33176960 - 33177124
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  33176960 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 33177057  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  33177058 aactttttgtcccacgcacaagttgtctaaaataccaaaataacattttgtc-ccccaaaaatcgtat 33177124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38812678 - 38812514
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  38812678 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 38812581  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||    
T  38812580 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgt-tccgcaaaaatcgtat 38812514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23522038 - 23521874
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||   || |||||||| ||||||||||||||||||||||||||| |||    
T  23522038 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaagggat--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 23521941  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  23521940 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 23521874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29785465 - 29785629
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  29785465 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggac--agaacaaaaactcatatttttgtccctcaccaaaccacaacac 29785562  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    | | ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  29785563 agctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 29785629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 56154779 - 56154630
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  56154779 cagtgtttgatttgtaaaactgtttcaggtacaggaaaaactggaggcaagggac--agaacaaaaactcatatttttgtccctcaccaaaccacagcac 56154682  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56154681 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 56154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33552770 - 33552934
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||| ||||||||||||||||||||||||||| |||    
T  33552770 cagtgtttgatttgtaaaactgtttcaggtacaggacaaattggatgcaagggac-aag-acaaaaactcatatttttgtccctcaccaaaccacagcac 33552867  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  33552868 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 33552934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24002497 - 24002351
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  24002497 cagtgtttgatttgtaaaacagtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 24002400  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  24002399 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttt 24002351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 2725061 - 2725224
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  2725061 cagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 2725158  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||| |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  2725159 aactttttgt-ccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 2725224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21202897 - 21202734
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||  || |||||||| |||| |||||||||||||||||||||| |||    
T  21202897 cagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagac--aggacaaaaactcataattttgtccctcaccaaaccacaacac 21202800  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||    
T  21202799 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgt--ccccaaaaatcgtat 21202734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 21580184 - 21580020
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  21580184 cagtatttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 21580087  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||| ||||| |||||||||||||||||| ||||| || ||||||||||||    
T  21580086 aactttttgtctcacgtacaaattgtctaaaataccaaaatagcatgttgtc-cctcaaaaatcgtat 21580020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36886090 - 36885926
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  36886090 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 36885993  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||||||||| ||||| |||||||| ||||||||||||||| || ||||||||||||    
T  36885992 aactttttatcccacgtacaaattgtctaaaatacctaaatagcattttgtc-cctcaaaaatcgtat 36885926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 52949878 - 52949714
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||||||||| ||||||||| |||    
T  52949878 cagtgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtccctcagcaaaccacaacac 52949781  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  52949780 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 52949714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20694529 - 20694370
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||  || |||||||| ||||||||||||||||||||||||||| | |    
T  20694529 cagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaaggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacgc 20694432  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaat 163  Q
    ||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  20694431 aactttttgtccaacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaaaaat 20694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 24210475 - 24210331
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| |||||| |||||||||||||||||||| |||||    
T  24210475 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatattattgtccctcaccaaaccacagcacaa 24210378  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    | |||| |||||||||||||||||| |||||||||||||||||||||    
T  24210377 ctttttatcccacgtacaagttgtctaaaataccaaaatagcatttt 24210331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 50727842 - 50728005
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||  || |||||||| ||||||||||||||||| ||||||||| ||||    
T  50727842 agtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggac--aggacaaaaactcatatttttgtccctcatcaaaccacaacaca 50727939  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  50727940 actttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 50728005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 50735856 - 50736019
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||  || |||||||| ||||||||||||||||| ||||||||| ||||    
T  50735856 agtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggac--aggacaaaaactcatatttttgtccctcatcaaaccacaacaca 50735953  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  50735954 actttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 50736019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4325949 - 4325788
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || | |||||| |||||||||||| ||||| ||||| || |||    
T  4325949 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--aggagaaaaactcatatttttgtctctcacaaaaccgcaacac 4325852  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcg 165  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  4325851 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaaaaatcg 4325788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 52319478 - 52319317
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  || || ||||| ||||||||||||||||||||||||||| ||||||    
T  52319478 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacgaaaactcatatttttgtccctcaccaaaccacagcacaac 52319381  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||  ||||||| ||||||||| || ||||||||||||    
T  52319380 tttttgtcccacgtacaagttgtctaaaatgtcaaaataacattttgtc-cctcaaaaatcgtat 52319317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 55065260 - 55065410
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagg-caaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatca 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||  || |||||||| ||||||||||||||||||||||||||| ||    
T  55065260 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaaca 55065357  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  55065358 caactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc 55065410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 1231469 - 1231305
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||  | |||||||| |||||||||||||||||| |||||||| |||    
T  1231469 cagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagagact--ggacaaaaactcatatttttgtccctcacaaaaccacagcac 1231372  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||| ||||||||| || ||||||||||||    
T  1231371 aactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtc-cctcaaaaatcgtat 1231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 32181421 - 32181257
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||| ||||  || |||||||| |||||||||||||||||||||||||||  ||    
T  32181421 cagtgtttgatttgtaaaactgtttcaagtacaggacaaactagatgcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagtac 32181324  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  32181323 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttcgtc-ccccaaaaatagtat 32181257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36497375 - 36497211
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  |||  || |||||||| |||||||||||||||||||||||||||||||    
T  36497375 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 36497278  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||| || ||||||||||| |||||| |||||||||||| |||| || ||||||||||||    
T  36497277 aactttttgtccaacatacaagttgtctaaaatatcaaaatagcattctgtc-cctcaaaaatcgtat 36497211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 36743616 - 36743765
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||  |  |||||||  ||||||||||||||||||||||| ||| |||    
T  36743616 cagtgtttgaattgtaaaactgtttcaggtacaggacaaactggaggcaagggac--atgacaaaaattcatatttttgtccctcaccaaactacagcac 36743713  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36743714 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 36743765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 44324270 - 44324434
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||   | ||||||||  |||||||||||||||||||||||||| |||    
T  44324270 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaagacg--ggacaaaaactgatatttttgtccctcaccaaaccacagcac 44324367  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||   ||||||||||||||||||| ||| |||||||||||||||    
T  44324368 aactttttgtcccacgtacaagttgttttaaataccaaaatagcatttcgtc-ccccaaaaatcgtat 44324434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 44649092 - 44649256
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||||||||| ||||||||| |||    
T  44649092 cagtttttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtccctcagcaaaccacaacac 44649189  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  44649190 aactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 44649256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 46680438 - 46680587
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||| ||||||||||| |||    
T  46680438 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtcccttaccaaaccacagcac 46680535  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||| ||||||||| ||||| ||||||||| ||||||||||||||    
T  46680536 aactttttgtctcacgtacaaattgtctaaaataccataatagcattttgtc 46680587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 50178420 - 50178585
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  |||||||||| ||||| ||||||||| |||    
T  50178420 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgtgcctcagcaaaccacagcac 50178517  T
Q  101 aac-gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||  ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  50178518 aacttttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 50178585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 9512268 - 9512417
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||   ||  || |||||||| ||||||||||||| ||||||||||||| |||    
T  9512268 cagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagtaac--aggacaaaaactcatatttttgtccttcaccaaaccacagcac 9512365  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9512366 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 9512417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 38486185 - 38486334
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  38486185 cagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacagcac 38486282  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||  |||||||||||||| |||||| |||||||||||||||||    
T  38486283 aactttttgtctaacgtacaagttgtctaaaatatcaaaatagcattttgtc 38486334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 54543147 - 54542984
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||| | |||    
T  54543147 cagtgtttgatttgtaaaactatttcaagtacaggacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccatagcac 54543050  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  54543049 aac-ttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtc-cctcaaaaatcgtat 54542984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 55594043 - 55593879
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||| ||||  || |||||||| |||||||| |||||||||||||||||| |||    
T  55594043 cagtatttgatttgtaaaactgtttcaggtacatgataaactggaggcaagggac--aggacaaaaactcatattttagtccctcaccaaaccacagcac 55593946  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  55593945 aactttttatcccacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 55593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 12601044 - 12600895
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  || |||| ||| |||||||| ||||||||||||||||| ||||||||| |||    
T  12601044 cagtgtttgatttgtaaaacagtttcaggtacaggacaaactggagataagggac-aag-acaaaaactcatatttttgtccctcatcaaaccacaacac 12600947  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12600946 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc 12600895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47642419 - 47642583
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||| ||| | ||||||  |||||||||||||||| ||||||||| |||    
T  47642419 cagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagac-aag-ataaaaactgatatttttgtccctcagcaaaccacaacac 47642516  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  47642517 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 47642583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 2629881 - 2630018
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |  |||||||| |||||||||||||||||||| |||| |||||||    
T  2629881 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaggac--atgacaaaaactcatatttttgtccctcaccagaccaaatcacaa 2629978  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaata 142  Q
    | ||||||| ||||||||||||||| ||||||||||||||    
T  2629979 ctttttgtctcacgtacaagttgtctaaaataccaaaata 2630018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 20517950 - 20518099
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||  || |||||||  |||||||||||||||||||||| |||| ||     
T  20517950 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagagac--aggacaaaaagtcatatttttgtccctcaccaaatcacagcat 20518047  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  20518048 aacttcttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 20518099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34930073 - 34929909
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||| ||||  || |||||||| ||||||||||| ||||||||||||||| |||    
T  34930073 cagtgtttgatttgtaaaactgtttcagatacagaataaactggaggcaagggac--aggacaaaaactcatatttttgttcctcaccaaaccacagcac 34929976  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||| ||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  34929975 aactttttgccccatatacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 34929909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 37865911 - 37865762
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||  |||  |  |||||||| |||||||||||||||||||||| |||| |||    
T  37865911 cagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagac--atgacaaaaactcatatttttgtccctcaccaaatcacaacac 37865814  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37865813 aactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtc 37865762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 41712005 - 41711841
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||  || ||||| || |||||||||||||||||||||||||||  ||    
T  41712005 cagtgtttgatttgtaaagctgtttcaggtacaggacaaactgaaggcaagggac--aggacaaagactcatatttttgtccctcaccaaaccacagtac 41711908  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| |||||||| |||||| |||||||||||||||||||| ||| ||||||| |||||||    
T  41711907 aactttttgtctcacgtacaggttgtctaaaataccaaaatagcatttcgtc-ccccaaatatcgtat 41711841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 11056200 - 11056036
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||  |||||||||||||| ||||||||||| |||    
T  11056200 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-acaaaaactgatatttttgtcccttaccaaaccacaacac 11056103  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| || ||||||| |||||  ||||| |||||||||||||| ||||| || ||| ||||||||||||    
T  11056102 aactttatgtcccatgtacagattgtcaaaaataccaaaataacatttcgt-gcctcaaaaatcgtat 11056036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 3649793 - 3649636
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||| ||||  || ||||||||  | |||||||||||||||||||||||| ||||    
T  3649793 agtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggac--aggacaaaaactaaaatttttgtccctcaccaaaccacagcaca 3649696  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
    || ||||||||||||||||||||||| |||| ||||||||| ||||| ||| |||||||||    
T  3649695 actttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtc-ccccaaaaa 3649636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 49152028 - 49152176
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  49152028 cagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgcaagggac--acgacaaaaactcatatttttgtccctcaccaaaccacaacac 49152125  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||| |||||||||||||||||| |||| ||||||||| |||||||||    
T  49152126 aactttttatcccacgtacaagttgtctaaaa-accaaaataacattttgtc 49152176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 42870127 - 42869986
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||  |||  || |||||||| ||||||||||||||||||||||||||| |||||    
T  42870127 gtgtttgatttgtaaaactgtttctggtacaggacaaactgggggcaagagac--aggacaaaaactcatatttttgtccctcaccaaaccacagcacaa 42870030  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    |   |||||||||||| |||||||| ||||||| |||||||||||||    
T  42870029 c---ttgtcccacgtataagttgtctaaaatacaaaaatagcatttt 42869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9807313 - 9807150
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| || |||| ||||  || |||||||| ||  ||||||||| |||||||||||||  ||    
T  9807313 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactagatgcaatggac--aggacaaaaactcaactttttgtcc-tcaccaaaccacagtac 9807217  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||| |||||||||||||| |||||||||||||||||||| ||| | |||||||||||||    
T  9807216 aactttttgtcctacgtacaagttgtctaaaataccaaaatagcatttcgtc-ctccaaaaatcgtat 9807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 50186686 - 50186522
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||| |||| ||||||||||| ||||||| ||||   | | |||||| ||||||||||||||||||||||||||| |||    
T  50186686 cagtgtttgatttgtaaaattgttttaggtgcaggacaaactagaggcaagggacg--ggataaaaactcatatttttgtccctcaccaaaccacaacac 50186589  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||| ||||||||||| ||||||| |||||||||||| | | |||||||||||||||    
T  50186588 aactttttatcccacatacaagttgtctaaaatacaaaaatagcatttcg-caccccaaaaatcgtat 50186522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 50729470 - 50729615
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||  |  ||||||||  | |||||||||  ||||||||||||| |||    
T  50729470 cagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggac--atgacaaaaactgaaatttttgtctatcaccaaaccacagcac 50729567  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  50729568 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattt 50729615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 28115408 - 28115265
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||| ||||  || | |||||   |||||||||||||||||||||||||| ||||    
T  28115408 agtgtttgatttgtaaaactgtttt-ggtacaagacaaactggaggcaagggac--aggagaaaaattgatatttttgtccctcaccaaaccacaacaca 28115312  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  28115311 actttttgtcccacatacaagttgtctaaaataccaaaatagcattt 28115265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 43641199 - 43641093
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  43641199 acaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaa 43641101  T
Q  161 aatcgtat 168  Q
    ||||||||    
T  43641100 aatcgtat 43641093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 47361342 - 47361486
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| ||||||   ||||||||||||||||||||||||||| |||    
T  47361342 cagtgtttgatttgtaaaactgtttcaggtacaggacaaaccggaggcaagggac-aag-acaaaatt-catatttttgtccctcaccaaaccacaacac 47361438  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||     |||||||||| ||||||||||||||||||||||||    
T  47361439 aactttttgtcc----aacaagttgtctaaaataccaaaatagcattttgtc 47361486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 29616324 - 29616179
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttc-aggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatca 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  || |||||||| |||||||||||||||      |||||| ||    
T  29616324 cagtgtttgatttgtaaaactgtttcaaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccct-----gaccacagca 29616232  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||| ||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  29616231 caactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtc 29616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6776736 - 6776587
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| || || ||||| || ||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  6776736 cagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 6776639  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||||||||| |||||||| |||| | ||||||| |||||||||    
T  6776638 aactttttgtcccacgtaaaagttgtctaaaacatcaaaatatcattttgtc 6776587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 29593053 - 29592893
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |  |||||||| ||||||||||| | |||| |||||||| |||    
T  29593053 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggatgcaagggac--atgacaaaaactcatatttttgtacttcactaaaccacagcac 29592956  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||||||| || |||||||| ||||  ||||||| |||||| ||| |||||||||||    
T  29592955 aactttttgtcccacataaaagttgtctaaaaatccaaaatggcatttcgtc-ccccaaaaatc 29592893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 2787121 - 2786962
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||| |||||||||||||| |||||||||| |||| ||||  || |||||||| ||||||||||||| |||| |||||||||||||    
T  2787121 agtgtttgatttgtaaaattgtttcaggtacagtacaaactggatgcaagggac--aggacaaaaactcatatttttgtccttcactaaaccacatcaca 2787024  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    |  ||||||||||||||||| || || ||||  |||||||| ||||| ||| |||||||||||    
T  2787023 aatttttgtcccacgtacaaattatctaaaaatccaaaataacatttcgtc-ccccaaaaatc 2786962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16320677 - 16320532
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||| |||||||||||||||||| ||||||| |||| ||||||||||||| ||||  || | ||||||  |||||||||||||||||||||||||| |||    
T  16320677 cagtatttgatttgtaaaactgtctcaggtataggaaaaactggaggcaagggac--aggataaaaactgatatttttgtccctcaccaaaccacaacac 16320580  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| |||||||||||||||| |||| | ||||||| ||||||| ||||    
T  16320579 aactttttgtcccacgtacaggttgcctaaaatacaaaaatagaattt 16320532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39078819 - 39078659
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||  ||   || |||||| |  | |||||||||||||||||||||||| |||    
T  39078819 cagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagagat--aggacaaaacctgaaatttttgtccctcaccaaaccacaacac 39078722  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||  |||||||| |||||| ||||||| |||| ||||||||| ||||||||| |||||||||||    
T  39078721 aaatttttgtcctacgtacgagttgtctaaaacaccaaaataacattttgtc-ccccaaaaatc 39078659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 37695470 - 37695633
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||| ||||| |||||||||||||||||| || ||| |||||| ||  ||| ||| ||||||||  |||||||||||||||| ||||||||| ||||    
T  37695470 agtgttttatttggaaaactgtttcaggtacatgataaattggaggtaagagac-aag-acaaaaactgatatttttgtccctcatcaaaccacaacaca 37695567  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || |||||||||||||||| |||||| |||||| ||||||| ||||| ||| |||||||||||||||    
T  37695568 actttttgtcccacgtacaggttgtctaaaatatcaaaataacatttcgtc-ccccaaaaatcgtat 37695633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 23328019 - 23327911
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgtttt-gtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaa 159  Q
    |||||||| ||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||||||| |||||||||||||| |||||| || ||||||    
T  23328019 acaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaataacattttatccccccaa 23327920  T
Q  160 aaatcgtat 168  Q
    |||||||||    
T  23327919 aaatcgtat 23327911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 26083496 - 26083338
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||  |  ||||||||  | |||||||||||||||||||||||| || |    
T  26083496 agtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggac--atgacaaaaactgaaatttttgtccctcaccaaaccacagcata 26083399  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaata-ccaaaatagcattttgtcgccccaaaaa 162  Q
    || ||||||||||| ||||||||||| |||| | |||||||| ||||| ||| |||||||||    
T  26083398 actttttgtcccacttacaagttgtctaaaacacccaaaataacatttcgtc-ccccaaaaa 26083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 42772945 - 42772832
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||  ||| ||| |||||||| ||||||||||||| ||||||||||||| ||||    
T  42772945 agtgtttgatttgtaaaattgtttcaggtacatgacaaacttgaggcaagagac-aag-acaaaaactcatatttttgtccttcaccaaaccacaacaca 42772848  T
Q  102 acgttttgtcccacgt 117  Q
    || |||||||||||||    
T  42772847 actttttgtcccacgt 42772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 53200572 - 53200717
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||| |||||||||||||  |||||| ||||||||||||| | ||  |  ||||||||  | |||||||||||||||||||||||| ||||    
T  53200572 agtgtttgatttgcaaaactgtttcagagacaggataaactggaggcaaggaac--atgacaaaaactgaaatttttgtccctcaccaaaccacagcaca 53200669  T
Q  102 ac-gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||  ||||||||||||||||||||||| |||| | |||||||| ||||    
T  53200670 acttttttgtcccacgtacaagttgtctaaaacatcaaaatagtattt 53200717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 22318313 - 22318461
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||| ||| |||| |||||||| ||||||  |||  || ||||||    | |||||||||||||||||||||||| ||||    
T  22318313 agtgtttgatttgtaaaactgttttagggacagaacaaactgaaggcaagagac--aggacaaaatttgaaatttttgtccctcaccaaaccacaacaca 22318410  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    || |||||||  ||||| |||||||| |||| ||||||||| |||||||||    
T  22318411 actttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtc 22318461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25978540 - 25978663
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||||| | ||  || ||||||||  | |||||||||||||||||||||| |||||    
T  25978540 cagtgtttgatttgtaaaactgtttcagg-acatgacaaattggaggcaatgaac--aggacaaaaactgaaatttttgtccctcaccaaaccatatcac 25978636  T
Q  101 aacgttttgtcccacgtacaagttgtc 127  Q
    ||| ||||||| ||| |||||||||||    
T  25978637 aactttttgtctcacttacaagttgtc 25978663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 37932022 - 37931914
Alignment:
Q  59 gcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgcccca 158  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||  |||||  ||||||||||||| ||| |||||    
T  37932022 gcacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaatgtcaaaatagcatttcgtc-cccca 37931924  T
Q  159 aaaatcgtat 168  Q
    ||||| ||||    
T  37931923 aaaattgtat 37931914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6973841 - 6973946
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||  |||  || |||||||| |||| ||||||||||| |||||||||| |||    
T  6973841 cagtgtttgatttgtaaaactgtttcaggtactggacaaacgggaggcaattgac--aggacaaaaactcataattttgtccctcgccaaaccacaacac 6973938  T
Q  101 aacgtttt 108  Q
    ||| ||||    
T  6973939 aacttttt 6973946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 7554885 - 7555030
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||  |||||||| | ||||  |||  |  | |||||| | ||||||||||| |||| |||||| | |||    
T  7554885 cagtgtttgatttgtaaaactgtttcatgtacaaaacaaactgaatgcaagagac--atgataaaaactcgtatttttgtccttcactaaaccataacac 7554982  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||| ||||||||||||||| ||||  ||||||||||||||    
T  7554983 aactttttgtctcacgtacaagttgtctaaaaatccaaaatagcattt 7555030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 9948084 - 9947947
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||||  |||  |  ||||||||  | ||| || |||||||| ||||||||| |||||    
T  9948084 tgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaagagac--atgacaaaaactaaaattcttatccctcactaaaccacattacaac 9947987  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
     ||||||| |||||||||||| |  |||||||||||||||    
T  9947986 tttttgtctcacgtacaagttattcaaaataccaaaatag 9947947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14296725 - 14296645
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccc 83  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||  || |||||||| ||||||||||||||    
T  14296725 cagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaagggac--aggacaaaaactcatatttttgtccc 14296645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14314973 - 14314893
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccc 83  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||  || |||||||| ||||||||||||||    
T  14314973 cagtgtttgatttgtaaaattgtttcaggtataggacaaacttgaggcaagggac--aggacaaaaactcatatttttgtccc 14314893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 43739545 - 43739473
Alignment:
Q  77 ttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||  |||||| ||||||    
T  43739545 ttgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacatttt 43739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 14296653 - 14296591
Alignment:
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||    
T  14296653 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-tcccaaaaatcgtat 14296591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 14314901 - 14314839
Alignment:
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||    
T  14314901 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-tcccaaaaatcgtat 14314839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 30942947 - 30942801
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||| ||||||||||||||| |||| ||||| |||||||||  |||    || ||||||  | |||| |||| |||||||||||||| |||    
T  30942947 cagtgtttgatttataaaactgtttcagggacagaacaaattggaggcaagagacgggaca-aaaaactgaaatttctgtctctcaccaaaccacaacac 30942849  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||| | ||| || |||||||| |||| ||||||||| |||||    
T  30942848 aacattttgcctcacatataagttgtctaaaacaccaaaatatcattt 30942801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 7001952 - 7001866
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||||||||| | |||||||||||||||||||||||| |||||| |||||| | | ||| ||||||||  ||||||||||||| |||||    
T  7001952 acaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtc-taaataccaaaataacattt 7001866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 45577706 - 45577769
Alignment:
Q  89 aaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||| |||||| ||||||||||||| ||||||||| |||||||||||||  |||||||||    
T  45577706 aaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtc 45577769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 38520584 - 38520518
Alignment:
Q  76 tttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaata 142  Q
    ||||||||||||||||||||| || ||  |||||||||||| |||||||||  ||||||||||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgtataaaataccaaaata 38520518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 164
Target Start/End: Complemental strand, 13110425 - 13110325
Alignment:
Q  64 aaaacacatatttttgtccctcaccaaa-ccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
    ||||| ||||||||||||| |||| ||| ||||| ||||||  ||||||||||||| || ||||| ||||  |||||||||||||| ||| |||||||||    
T  13110425 aaaactcatatttttgtccttcactaaaaccacaacacaactgtttgtcccacgtaaaatttgtctaaaaatccaaaatagcatttcgtc-ccccaaaaa 13110327  T
Q  163 tc 164  Q
    ||    
T  13110326 tc 13110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 56487212 - 56487264
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac 55  Q
    |||||||||||||||||||||||||| || |||||||||| ||||||| ||||    
T  56487212 gtgtttgatttgtaaaactgtttcagatataggacaaacttgaggcaagggac 56487264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 23328052 - 23328015
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaa 40  Q
    |||||||| |||||||||||||||||||||||||||||    
T  23328052 gtgtttgacttgtaaaactgtttcaggtacaggacaaa 23328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 3579279 - 3579142
Alignment:
Q  5 gtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatattt-ttgtccctcaccaaaccacatcacaac 103  Q
    |||||||| ||||| |||||| |||  ||||||||||| ||||||| ||||  |  |||||||   | |||| || ||| |||| |||||| ||||||||    
T  3579279 gtttgattcgtaaatctgttttaggggcaggacaaacttgaggcaagggac--atgacaaaaaagtaaatttattttccatcactaaaccatatcacaac 3579182  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatag 143  Q
     |||||||| || | ||||||||| |||||||||||||||    
T  3579181 tttttgtccaacattcaagttgtctaaaataccaaaatag 3579142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 51518528 - 51518481
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaa 51  Q
    ||||||||||||||||||||||| | |||||||||| ||||| |||||    
T  51518528 tgtttgatttgtaaaactgtttctgatacaggacaagctggaagcaaa 51518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 52673911 - 52673830
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaata 142  Q
    ||||||||| | ||||||||||||||| ||||| || |||||  ||||||| ||||||  |||| || ||||||| ||||||    
T  52673911 acaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaaata 52673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 40792486 - 40792426
Alignment:
Q  92 ccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||||||| ||||||  || ||||||||| || ||||||| |||||||| |||||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtc 40792426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 42772814 - 42772770
Alignment:
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    |||||||||||||| ||||| || |||||||||||||| ||||||    
T  42772814 ttttgtcccacgtataagttatctaaaataccaaaataacatttt 42772770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 9e-60; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 28675946 - 28675782
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||   || |||||||| ||||||||||||||||||||||||||| |||    
T  28675946 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggat--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 28675849  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  28675848 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 28675782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 20609580 - 20609741
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||||||    
T  20609580 tgtttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcacaac 20609677  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  20609678 tttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 20609741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12349100 - 12349264
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| |||||||||||| |||||||||||||| |||    
T  12349100 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtctctcaccaaaccacagcac 12349197  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| || |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  12349198 aactttatgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 12349264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 29585031 - 29584882
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||||||| |||    
T  29585031 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 29584934  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29584933 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 29584882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 3864606 - 3864763
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||  || |||||||| |||||||||||||||| |||||||||| |||||    
T  3864606 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaaggac--aggacaaaaactcatatttttgtccctcgccaaaccacaacacaa 3864703  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  3864704 ctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgt--ccccaaaaatc 3864763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 39052768 - 39052931
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||  || |||||||| |||||||||||| |||||||||||||| ||||    
T  39052768 agtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggcaatggac--aggacaaaaactcatatttttgtctctcaccaaaccacaacaca 39052865  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  39052866 actttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-ccccaaaaatcgtat 39052931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1344636 - 1344800
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  || ||| |||| ||||||||||||||||||||||||||| |||    
T  1344636 cagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaagggac--aggacagaaactcatatttttgtccctcaccaaaccacagcac 1344733  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  1344734 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 1344800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 25860350 - 25860514
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  25860350 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacatcac 25860447  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||| ||||||||||||||  | |||||||||||||    
T  25860448 aactttttgtctcacgtacaagttgtctaaaataccgaaatagcattttgt-tctccaaaaatcgtat 25860514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 29646222 - 29646058
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||| |||   || ||||||||| ||||||||||||||||||||||||||||||    
T  29646222 cagtgtttgatttgtaaaactgttttaggtacacgataaactggaggcaagggat--aggacaaaaacatatatttttgtccctcaccaaaccacatcac 29646125  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  29646124 aactttttgtcccacgtacaagttgtttaaaataccaaaatagcattttgtc-ccccaaaaatcgtat 29646058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34026823 - 34026659
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  |  |||||||| ||||||||||||||||||||||||||| |||    
T  34026823 cagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggac--atgacaaaaactcatatttttgtccctcaccaaaccacaacac 34026726  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||  ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  34026725 aattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 34026659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47958361 - 47958525
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||  || |||||||| ||||||||||||||||||||||| ||| |||    
T  47958361 cagtgtttgatttgtaaaattgtttcaggtacaggaaaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaactacagcac 47958458  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  47958459 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 47958525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 51259709 - 51259858
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||  |||    
T  51259709 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacggcac 51259806  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  51259807 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 51259858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 42636332 - 42636494
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  42636332 cagtgtttgatttgtaaaactgttttaggtataggacaaactggaggcaagggac--agaacaaaaactcatatttttgtccctcaccaaaccacagcac 42636429  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgt 166  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||    
T  42636430 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgt 42636494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24571437 - 24571276
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  24571437 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 24571340  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcg 165  Q
    ||| |||||||||| |||||||||||| ||||||| ||||||| |||||||| ||||||||||||    
T  24571339 aactttttgtcccatgtacaagttgtctaaaatacaaaaataggattttgtc-ccccaaaaatcg 24571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 40094659 - 40094498
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||||||||||    
T  40094659 cagtgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 40094562  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcg 165  Q
    ||| ||||||  ||||||||| ||||| |||||||||||||||||||||||| || |||||||||    
T  40094561 aactttttgtttcacgtacaaattgtctaaaataccaaaatagcattttgtc-cctcaaaaatcg 40094498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2135226 - 2135062
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  2135226 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--agaacaaaaactcatatttttgtccctcaccaaaccacagcac 2135129  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||| || || ||||||||||||||||| |||||| || ||||||||||||    
T  2135128 aactttttgtcccacgtacaaattatctaaaataccaaaatagcactttgtc-cctcaaaaatcgtat 2135062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44117095 - 44116931
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||| ||||||||  |||    
T  44117095 cagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcatcaaaccactgcac 44116998  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||| |||||||||||||||| || ||||||||||||    
T  44116997 aactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtc-cctcaaaaatcgtat 44116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 51296737 - 51296573
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  51296737 cagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 51296640  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||  |||||||| | |||||||||||| ||||||| |||||||||||||||| ||| |||||||||||    
T  51296639 aattttttgtcctaagtacaagttgtctaaaatacaaaaatagcattttgtc-cccaaaaaatcgtat 51296573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 21374085 - 21373941
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||| | ||||||||||||||||||||||||||| ||||    
T  21374085 agtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggac--aggacaaaatctcatatttttgtccctcaccaaaccacaacaca 21373988  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||    
T  21373987 actttttgtcccacgtacaagttgtctaaaataccaaaatagcattt 21373941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 49748841 - 49749004
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||  |||||||||||||||||||||||||| ||||    
T  49748841 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac--atgacaaaaactgatatttttgtccctcaccaaaccacaacaca 49748938  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || ||||||||||||||||||||||   ||||||||||||| ||||| ||| |||||||||||||||    
T  49748939 actttttgtcccacgtacaagttgttttaaataccaaaataacatttcgtc-ccccaaaaatcgtat 49749004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 31882951 - 31883115
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |  ||||||||  |||||||||| ||||| ||||||||| |||    
T  31882951 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--acgacaaaaactgatatttttgtgcctcagcaaaccacagcac 31883048  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  31883049 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 31883115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33364707 - 33364871
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||  ||||||||| |||||| |||||||||||||    
T  33364707 cagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--aggacaaaaactgatatttttgcccctcagcaaaccacatcac 33364804  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  33364805 aactttttgtctcacgtacaagttgtctaaaatatcaaaatagcattttgtc-ccccaaaaatcgtat 33364871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 21221295 - 21221438
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgt 105  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||||| |    
T  21221295 tttgatttgtaaaactgtttcaggtacaggacaa-ctggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 21221391  T
Q  106 tttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  21221392 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc 21221438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 53557727 - 53557873
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||  || |||||||| |||| |||||||||||||||||||||  ||||||    
T  53557727 tgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaatggac--aggacaaaaactcatagttttgtccctcaccaaaccactgcacaac 53557824  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  53557825 tttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc 53557873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 20255200 - 20255052
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||  || |||||||| ||||||||||||||||||||||||||| |||    
T  20255200 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 20255103  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| | ||||||||| ||||||||||| |||||||||||||| |||||||||    
T  20255102 aacttcttgtcccac-tacaagttgtctaaaataccaaaataacattttgtc 20255052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38213510 - 38213346
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||  |||  || |||||||| |||||||||||| ||||| |||||||| |||    
T  38213510 cagtgtttgatttgtaaaattgtttcaggtataggacaatctggaggcaagagac--aggacaaaaactcatatttttgtcactcacgaaaccacaacac 38213413  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  38213412 aactttttgtcccacgtacaagttgtctaaaataccaaaataccattttgtc-ccccaaaaatcgtat 38213346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 51925137 - 51925301
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||  || ||||||||  |||||||||||||||||||||||||| |||    
T  51925137 cagtgtttaatttgtaaaactgtttcaggtacatgacaaactggaggcaaaggac--aggacaaaaactgatatttttgtccctcaccaaaccacaacac 51925234  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||    |||||||||||| ||||| ||| |||||||||||||||    
T  51925235 aactttttgtcccacgtacaagttgtttttaataccaaaataacatttcgtc-ccccaaaaatcgtat 51925301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 25927259 - 25927420
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||  || |||||||| ||||||||||||||| |||||| |||| ||||||    
T  25927259 tgtttgatttgtaaaactgtttcaaatacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtcccttaccaaaacacaacacaac 25927356  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||||||||||| ||||||||  || ||||||||||||    
T  25927357 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgt-tcctcaaaaatcgtat 25927420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 50678954 - 50678809
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  || ||||||||  ||||||||||| |||||||||||||| |||    
T  50678954 cagtgtttgatttgaaaaactgtttcaggtacaggacaaactggaggcaaagaac--aggacaaaaactgatatttttgtctctcaccaaaccacaacac 50678857  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||| ||||||||||||||| ||||||||||||||| ||||    
T  50678856 aactttttgtctcacgtacaagttgtctaaaataccaaaatagtattt 50678809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 4851387 - 4851549
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||| |||||  ||||||||| ||||  || |||||||| |||  |||||||||||||||| ||||| |||    
T  4851387 cagtgtttgatttgtaaaactgttttaggtacaagacaatttggaggcaagggac--aggacaaaaactcat--ttttgtccctcaccaacccacaacac 4851482  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  4851483 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 4851549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 19906918 - 19906773
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||  || ||||||||  | |||||||||||||||||||||||| |||    
T  19906918 cagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggac--aggacaaaaactgaaatttttgtccctcaccaaaccacagcac 19906821  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||| ||||||||||||||| |||| |||||||||||||||    
T  19906820 aactttttgtctcacgtacaagttgtctaaaacaccaaaatagcattt 19906773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 50386386 - 50386549
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||  |  |||||||   |||||||||| ||||| ||||||||| ||||    
T  50386386 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac--atgacaaaaattgatatttttgtgcctcaacaaaccacagcaca 50386483  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    || |||||||| |||||||||||||| |||||| ||||||||||||||||  |||||||||| ||||    
T  50386484 actttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgt-tccccaaaaattgtat 50386549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3964444 - 3964285
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| | ||| |||||| ||||||||| | |||  | ||||||||  | |||||||||||||||||||||||| |||    
T  3964444 cagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaact--ggacaaaaactgaaatttttgtccctcaccaaaccacagcac 3964347  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| |||||||||| |||||||||||| |||||||||||||||||||| ||  |||||||||||    
T  3964346 aactttttgtcccatgtacaagttgtctaaaataccaaaatagcatttcgt--ccccaaaaatc 3964285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 168
Target Start/End: Original strand, 54622731 - 54622889
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgt 105  Q
    ||||||||||||||||||||||||||| | |||||||  | |||| ||||  || |||||||| |||||||||||| ||||| |||||||| |||||| |    
T  54622731 tttgatttgtaaaactgtttcaggtactg-acaaactaaatgcaagggac--aggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactt 54622827  T
Q  106 tttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  54622828 tttatcccacgtacaagttgtctaaaataccaaaatagcatttcgtc-ccccaaaaatcgtat 54622889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 24721641 - 24721482
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||  || ||||||||  | ||||| || ||||| ||||||||| |||    
T  24721641 cagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggtaaaggac--aggacaaaaactaaaattttggtacctcaacaaaccacaacac 24721544  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaa 162  Q
    ||| |||| |||||| ||||||||||| |||| |||||||||||||||  || |||||||||    
T  24721543 aactttttatcccacatacaagttgtctaaaacaccaaaatagcatttcatccccccaaaaa 24721482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 3867580 - 3867738
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||| |||  |||  |  |||||| |  | |||||||||||||||||||||||| |||||    
T  3867580 gtgtttgatttgtaaaactgtttcagggacagaacatactggagacaagagac--atgacaaaacctgaaatttttgtccctcaccaaaccacagcacaa 3867677  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    | |||||||| ||||||||||| || |||| ||||||||||||||||||| |||||||||||    
T  3867678 ctttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtc-ccccaaaaatc 3867738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 26282315 - 26282480
Alignment:
Q  3 gtgtttgatttgtaaaactgtt---tcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatca 99  Q
    ||||||||||||||||||| ||   | ||||||| ||||||||||||| ||  |||   | ||||||||  ||||||||||| |||| ||||||||| ||    
T  26282315 gtgtttgatttgtaaaactattatttaaggtacaagacaaactggaggtaagagacg--ggacaaaaacttatatttttgtctctcatcaaaccacagca 26282412  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||||| || ||||||||||||    
T  26282413 caactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 26282480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 45690835 - 45690994
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||  || ||||||||  |||||||| ||||||||||     || |||    
T  45690835 cagtgtttgatttgcaaaactgtttcaggtacaggataaattggaggcaaaggac--aggacaaaaactgatatttttctccctcacca-----cagcac 45690927  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| |||| | |||||||| ||||||||||||| |||||| ||| | |||||||||||||    
T  45690928 aactttttgtctcacgcataagttgtctaaaataccaaaatcgcatttcgtc-ctccaaaaatcgtat 45690994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3695236 - 3695385
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||  || ||||||||               |||||||||||||||||    
T  3695236 cagtgtttgatttgtaaaactgttttaggtacatgacaaactggaggcaagggac--aggacaaaaac---------------tcaccaaaccacatcac 3695318  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||||| ||||    
T  3695319 aaccttttgtcccacgtacaagttgtctaaaataccaaaatagtattttatc-ccccaaaaattgtat 3695385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5442435 - 5442283
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||  ||              |||||||||||||||||| |||| |||    
T  5442435 cagtgtttgatttgtaaagctgtttcaggtacaagacaaactggaggcaagggacagag--------------tttttgtccctcaccaaatcacagcac 5442350  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||||||||| |||| |||||| |||||||||||||| || || ||||||||||||    
T  5442349 aactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatc-cctcaaaaatcgtat 5442283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 39215404 - 39215547
Alignment:
Q  7 ttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgtt 106  Q
    ||||||||||||||||||||| | ||||||||||| ||||| || |||| ||| ||||||||  | ||||||  |||| ||| ||||| |||| ||  ||    
T  39215404 ttgatttgtaaaactgtttcaagaacaggacaaaccggaggtaagggac-aag-acaaaaactgaaatttttaccccttaccgaaccaaatcataatttt 39215501  T
Q  107 ttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  39215502 ttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 39215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 34351303 - 34351443
Alignment:
Q  7 ttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgtt 106  Q
    ||||||||||||||||||||||| ||| |||||||| |||| ||  |||  |  ||||||||| | ||| |||||||||| ||||||||| |||||| ||    
T  34351303 ttgatttgtaaaactgtttcagggacatgacaaactagaggaaatagac--acgacaaaaacaaaaattattgtccctcatcaaaccacaacacaacttt 34351400  T
Q  107 ttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    ||||| ||| ||||||||||| |||||| ||||||| ||||||    
T  34351401 ttgtcgcacatacaagttgtctaaaatatcaaaataacatttt 34351443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41682982 - 41683075
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccaca 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||  ||| |||||||||||| |||||||||    
T  41682982 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagac-aag-acaaaaactgatacttttgtccctcagcaaaccaca 41683075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22484672 - 22484830
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaac-acatatttttgtccctcaccaaaccacatca 99  Q
    ||||| |||||||||||||| |||||||| ||| |||||||||||||||| ||||  |  |||||| | ||| |||||||| |||  |||||| ||| ||    
T  22484672 cagtgattgatttgtaaaacagtttcagggacatgacaaactggaggcaagggac--atgacaaaagctaca-atttttgttccttgccaaactacaaca 22484768  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    |||| |||||||||||||| |||||||| ||||||| |||||||||||| ||| ||| ||||    
T  22484769 caactttttgtcccacgtataagttgtctaaaatacaaaaatagcatttcgtcacccaaaaa 22484830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 44000415 - 44000253
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    |||||| ||||||||||||||||  || | | || |||||  |||||||||||  |  ||||||||| |  ||||| |||||||| ||||||||||||||    
T  44000415 gtgtttcatttgtaaaactgtttttgggaaatgataaactcaaggcaaaggac--atgacaaaaacagaattttttttccctcactaaaccacatcacaa 44000318  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
      |||||||||||||||||||| ||  |||||| |||||||  ||||||| | |||||||||||||    
T  44000317 ttttttgtcccacgtacaagttatctgaaatacaaaaatagttttttgtc-caccaaaaatcgtat 44000253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 52300589 - 52300448
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||  ||||||||||||||  || |||||||||| ||| || ||||  || ||||||||  | |||||||||| ||||||||||||| | |||     
T  52300589 tgtttgattcataaaactgtttcagagacgggacaaactgcaggtaagggac--aggacaaaaactgaaatttttgtccatcaccaaaccacaacgcaat 52300492  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
     |||||||||| |||||||||||| |||| ||||||||| |||||    
T  52300491 tttttgtccca-gtacaagttgtctaaaacaccaaaatatcattt 52300448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 10747264 - 10747209
Alignment:
Q  113 cacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  10747264 cacgtacaagttgtctaaaatatcaaaatagcattttgtccccccaaaaatcgtat 10747209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 41694925 - 41694994
Alignment:
Q  98 cacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||| ||||||||||| ||||||||||| |||||||  ||||||||||||||| |||||||||||||||    
T  41694925 cacaactttttgtcccacatacaagttgtctaaaatactgaaatagcattttgtc-ccccaaaaatcgtat 41694994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6179582 - 6179467
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgt-ccctcaccaaaccacatca 99  Q
    |||||||||||||||||||| |||||||  ||||| ||||||||||| || ||||  || ||||||||    |||||||| ||||| |||||||||| ||    
T  6179582 cagtgtttgatttgtaaaacagtttcagaaacaggtcaaactggaggtaagggac--aggacaaaaactgtaatttttgtcccctcgccaaaccacagca 6179485  T
Q  100 caacgttttgtcccacgt 117  Q
    |||| ||||||| |||||    
T  6179484 caactttttgtcacacgt 6179467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10747356 - 10747311
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggag 46  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10747356 cagtgtttgatttgtaaaactattttaggtacaggacaaactggag 10747311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 53046605 - 53046646
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggagg 47  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  53046605 tttgatttgtaaaactgtttcaggtataggacaaactggagg 53046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 44267824 - 44267753
Alignment:
Q  77 ttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||||||||| |||||||||| || ||| |||| |||||| ||||| ||||| ||||||| ||||||||||||    
T  44267824 ttgtccctcgccaaaccacaacataactttttatcccacatacaaattgtctaaaatacaaaaatagcattt 44267753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43175631 - 43175589
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactg 43  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  43175631 cagtgtttgatttgtaaaactatttcaggtataggacaaactg 43175589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 25954548 - 25954443
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| |||||||||||| |||||||||  ||| |||||| ||||||| ||| || |||||||  ||||||| || ||| ||||| ||  |||||||    
T  25954548 acaaaaactcatatttttgtctctcaccaaattacagcacaactttttgtctcacatataagttgtttaaaatactaatataacatttcgt--ccccaaa 25954451  T
Q  161 aatcgtat 168  Q
    || |||||    
T  25954450 aagcgtat 25954443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 53046670 - 53046734
Alignment:
Q  98 cacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||| |||||||||||||||     ||| |||||||||||||||||||||||| || ||||||||||||    
T  53046670 cacaactttttgtcccacgtac-----gtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 53046734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 8648572 - 8648625
Alignment:
Q  89 aaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaata 142  Q
    |||| |||||||||| ||||||| || |||||| ||||| ||||||||||||||    
T  8648572 aaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaata 8648625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 32621923 - 32621886
Alignment:
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaata 142  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  32621923 ttttgtcccatgtacaagttgtctaaaataccaaaata 32621886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 3e-59; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 9732865 - 9733029
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||| |||    
T  9732865 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-acaaaaactcatatttttgtccctcaccaaaccacaacac 9732962  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||    
T  9732963 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-cctcaaaaatcgtat 9733029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 42706514 - 42706350
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||| |||    
T  42706514 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggga-taag-acaaaaactcatatttttgtccctcaccaaaccacaacac 42706417  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  42706416 aactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 42706350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 19513627 - 19513773
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||  || |||||||| ||||||||||||||||||||||||||| ||||||    
T  19513627 tgtttgatttgtaaaactgtttcaggtacaggacaaacgggaggcaaaggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcacaac 19513724  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19513725 tttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 19513773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34338965 - 34338801
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| |||||||||| |||||||||||||||| |||    
T  34338965 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgaccctcaccaaaccacagcac 34338868  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||||||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  34338867 aactttttgtcccacgcacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 34338801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 35114939 - 35114776
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||||    
T  35114939 agtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacaca 35114842  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |  ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  35114841 attttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 35114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 7761508 - 7761672
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  7761508 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 7761605  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  7761606 aactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 7761672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 37308810 - 37308661
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  37308810 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 37308713  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  37308712 aactttttgtcccacgtacaaattgtctaaaataccaaaatagtattttgtc 37308661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 30798423 - 30798588
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | | | |||||| |||||||||||||||||||||||||||||||    
T  30798423 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac-aggaaaaaaaactcatatttttgtccctcaccaaaccacatcac 30798521  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| ||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  30798522 aactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 30798588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 5278771 - 5278918
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||||    
T  5278771 gtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcacaa 5278868  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
      ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5278869 ttttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 5278918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 17540870 - 17540705
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  17540870 cagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 17540773  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaatacc-aaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||| ||||||| |||||||| || ||||||||||||    
T  17540772 aactttttgtcccacgtacaagttgtctaaaataccaaaaatagtattttgtc-cctcaaaaatcgtat 17540705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 2645022 - 2645185
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||   || |||||||| ||||||||||||||||||||||||||| |||    
T  2645022 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa-ggag--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 2645118  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||| ||||||||||| |||||||||||||||||||||||  || ||||||||||||    
T  2645119 aactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgt-tcctcaaaaatcgtat 2645185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 7259051 - 7258906
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| ||||    
T  7259051 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcaca 7258954  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatttt 149  Q
    || ||||||| ||||||||||||||| |||||||||||||| ||||||    
T  7258953 actttttgtctcacgtacaagttgtctaaaataccaaaataacatttt 7258906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 32498070 - 32497921
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||  || |||||||| ||||||||||| |||||||||||||||||||    
T  32498070 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggac--aggacaaaaactcatatttttgtacctcaccaaaccacatcac 32497973  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  32497972 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 32497921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 33366765 - 33366601
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||| ||||||||||| ||||||||||||||| |||    
T  33366765 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac--aggacaaaaactcatatttttgttcctcaccaaaccacaacac 33366668  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||| |||||| ||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  33366667 aactttttctcccacatacaagttgtctaaaataccaaaataacattttgtc-cctcaaaaatcgtat 33366601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18685991 - 18685842
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||| |||    
T  18685991 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggac-aag-acaaaaactcatatttttgtctctcaccaaaccacagcac 18685894  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||  |||||| |||||||||    
T  18685893 aactttttgtcccacgtacaagttgtctaaaatattaaaataacattttgtc 18685842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 33889397 - 33889249
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||  || |||||||| ||||||||| ||||||||||||||||||||||    
T  33889397 agtgtttgatttgtaaaattgtttcagatacaggacaaactggaggcaagggac--aggacaaaaactcatatttttttccctcaccaaaccacatcaca 33889300  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    || ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33889299 actttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 33889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44284784 - 44284620
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||| |||||||||||||||||| |||||||| |||    
T  44284784 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac-aag-acaaaaactcatatttttgtccctcactaaaccacagcac 44284687  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||    
T  44284686 aactttttgtctcacgtacaagttgtctaaaataacaaaatagcattttgtc-cctcaaaaatcgtat 44284620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16104429 - 16104265
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  16104429 cagtgtttgatttgtaaaactgtttcagatacacgacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 16104332  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||    
T  16104331 aactttttgtctcacgtacaaattgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 16104265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 12672411 - 12672573
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||   | |||||| | ||||||||||||||||||||||||||| |||||    
T  12672411 gtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacg--ggacaaaatctcatatttttgtccctcaccaaaccacaacacaa 12672508  T
Q  103 cgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
      |||| ||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  12672509 gtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtc-ctccaaaaatcgtat 12672573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3913395 - 3913559
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||   ||  || |||||||| || || ||||||||||||||||||||| |||    
T  3913395 cagtgtttgatttgtaaaactgtttcaggtatatgacaaactggaggcaagaaac--aggacaaaaactcacatgtttgtccctcaccaaaccacaacac 3913492  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| |||||| |||||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  3913493 aactttttgttccacgtacaagttgtctaaaataccaaaatagcattttg-ctccccaaaaatcgtat 3913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 30326267 - 30326430
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  || |||||||| |||||||| ||| ||| |||||||||| |||    
T  30326267 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaggggac--aggacaaaaactcatatttt-gtctctcgccaaaccacagcac 30326363  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||    
T  30326364 aactttttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtc-cctcaaaaatcgtat 30326430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 40832404 - 40832568
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||| ||||  || ||||||||  |||||||||||||||||||||||||| |||    
T  40832404 cagtgtttgatttgtaaagctatttcaggtacaagacaaactggaggcaagggac--aggacaaaaacggatatttttgtccctcaccaaaccacaacac 40832501  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||| ||| ||||||||||||||| |||| ||| |||||||||||||||    
T  40832502 aactttttgtctcacgtacaagtagtctaaaataccaaaatagtatttcgtc-ccccaaaaatcgtat 40832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32766439 - 32766604
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || ||||||||  |||||||||||||||||||||||||| |||    
T  32766439 cagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggac--aggacaaaaactgatatttttgtccctcaccaaaccacaacac 32766536  T
Q  101 aac-gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||  |||||||| ||||||| |||||| |||||||||||||| ||||| ||| | |||||||||||||    
T  32766537 aacttttttgtcctacgtacaggttgtctaaaataccaaaataacatttcgtc-ctccaaaaatcgtat 32766604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 16177818 - 16177982
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||  || ||| ||||  ||||||||||| || ||||||||||| |||    
T  16177818 cagtgtttgatttgtaaaactgtttcaagtacaggataaactggaggcaatggac--aggacataaactgatatttttgtcgcttaccaaaccacaacac 16177915  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||||||||||||||| ||||||||||||| | |||| ||| |||||||||||||||    
T  16177916 aactttttgtctcacgtacaagttgtctaaaataccaaaatggaatttcgtc-ccccaaaaatcgtat 16177982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 28824492 - 28824637
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| ||| || |  || |||||||| |||||||||||||||||||||||||||||||    
T  28824492 cagtgtttgatttgtaaaactgtttcaggtacagcacatactggagtcaagggtc--aggacaaaaactcatatttttgtccctcaccaaaccacatcac 28824589  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| |||| || ||||| ||||||||| ||||||| ||||||||||||    
T  28824590 aactttttatctcacgtgcaagttgtctaaaatactaaaatagcattt 28824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6896323 - 6896166
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||||||| ||||  || | ||||||  | |||||||||||||||||||| ||| |||    
T  6896323 cagtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaagggac--aggataaaaactgaaatttttgtccctcaccaaacaacagcac 6896226  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    ||| ||||||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||    
T  6896225 aactttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttcgtc-ccccaaaa 6896166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 42365731 - 42365583
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||| ||| ||||||||| ||||    
T  42365731 agtgtttgatttgtaaaaccgtttcaggtacatgacaaactggaggcaagggac-aag-acaaaaactcatatttttgtccttcatcaaaccacaacaca 42365634  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    || |||| |  |||| |||||||||| |||||||||||||| |||||||||    
T  42365633 actttttatatcacggacaagttgtctaaaataccaaaataacattttgtc 42365583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 38993006 - 38993164
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaac-acatatttttgtccctcaccaaaccacatca 99  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||| ||||  || |||||||| ||| |||||||| ||||  ||||||||| ||    
T  38993006 cagtgtttgatttgtaaaacagtttcaggaagaggacaaactggaggcaagggac--aggacaaaaactaca-atttttgttcctcgtcaaaccacaaca 38993102  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaa 161  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||| ||| ||| ||||    
T  38993103 caactttttgtcccacgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaaaa 38993164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 4641669 - 4641507
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    ||||  |  |||||||  |||||||||||| |||||||||||||| |||    
T  4641669 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggtg--ggacgga--acaaaaattcatatttttgtctctcaccaaaccacagcac 4641574  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| ||| ||||||||||  |||||||||||||||||||||||  || ||||||||||||    
T  4641573 aactttttgtctcacatacaagttgtttaaaataccaaaatagcattttgt-tcctcaaaaatcgtat 4641507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 11115022 - 11114882
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||  || |||||||  ||||||||||| ||||||||||||||||||||||    
T  11115022 tgtttgatttgtaaa-ctgtt-cagttacaggacaaactggaggcaagggac--aggacaaaaaatcatatttttgttcctcaccaaaccacatcacaac 11114927  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
     |||||||||||| |||||||||| ||||| ||||||||| ||||    
T  11114926 tttttgtcccacgcacaagttgtctaaaattccaaaatagtattt 11114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10399805 - 10399969
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| || ||||   ||  || |||||||| ||||||||||||| |||| |||||||| |||    
T  10399805 cagtgtttgatttgtaaaactatttcaggtacaggacaaactagatgcaagatac--aggacaaaaactcatatttttgtccttcactaaaccacaacac 10399902  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||| || ||| |||||||| ||||  |||||||||||||||||| |||||||| ||||||    
T  10399903 aactttttgtctcatgtataagttgtctaaaaatccaaaatagcattttgtc-ccccaaaagtcgtat 10399969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26981644 - 26981781
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||||||| |||  |  |||||||| ||||||||||||||||||||||||||| ||     
T  26981644 cagtgtttgatttgtaaaactgttccagatacaagacaaacgggaggcaaatgac--atgacaaaaactcatatttttgtccctcaccaaaccacaacaa 26981741  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaa 140  Q
    ||| |||||| | |||||||||||||| ||||||||||||    
T  26981742 aactttttgttctacgtacaagttgtctaaaataccaaaa 26981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 9717321 - 9717215
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||| || ||||    
T  9717321 acaaaaactcatgtttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtc-cctcaaa 9717223  T
Q  161 aatcgtat 168  Q
    ||||||||    
T  9717222 aatcgtat 9717215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 37003861 - 37003967
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||    
T  37003861 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtc-cctcaaa 37003959  T
Q  161 aatcgtat 168  Q
    ||||||||    
T  37003960 aatcgtat 37003967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39461469 - 39461305
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaa---accacat 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  || |||||||    | |||||||||||||||||   || |||     
T  39461469 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgac--aggacaaaaa---ttgtttttgtccctcaccaaatcacaacaa 39461375  T
Q  98 cacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||||| |||| || |||||||||| |||| |||||||||||||||||||||||| || ||||||||||||    
T  39461374 cacaactttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 39461305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40692452 - 40692321
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||| |||||| ||||||||| ||||||| |||||||||||| ||| ||||  || |||||||| | |||||||||||||||||||||||||  ||    
T  40692452 cagtgtttaatttgtgaaactgttttaggtacaagacaaactggagacaagggac--aggacaaaaactcgtatttttgtccctcaccaaaccacagaac 40692355  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaata 134  Q
    ||| ||||||||||||||||||||||| ||||||    
T  40692354 aactttttgtcccacgtacaagttgtctaaaata 40692321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 2086218 - 2086063
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||           ||||||| |||||||||||||||  ||||||||||  ||    
T  2086218 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaa-----------caaaaactcatatttttgtccctacccaaaccacagtac 2086130  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||  |||||||||||||||  ||||||||||||| ||||||||| || ||||||||||||    
T  2086129 aactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtc-cctcaaaaatcgtat 2086063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 38623242 - 38623363
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||  ||  ||||||||  | |||||||||||||||||||||||| ||||||    
T  38623242 tgtttgatttgtaaaactgtttcagggacaggacaaacttgaggcaatgga--aaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaac 38623339  T
Q  104 gttttgtcccacgtacaagttgtc 127  Q
     ||||||||||| |||||||||||    
T  38623340 tttttgtcccacatacaagttgtc 38623363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 26419020 - 26418914
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||||| || |||||||    
T  26419020 acaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatc-ccccaaa 26418922  T
Q  161 aatcgtat 168  Q
    ||| ||||    
T  26418921 aattgtat 26418914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 8112453 - 8112308
Alignment:
Q  3 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaa 102  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  |||  |  |||||||| |||||||||||| |||||||||||||| |||||    
T  8112453 gtgtttgatttgtaaaattgtttcaggtacagaacaaactggaggcaagagac--aatacaaaaactcatatttttgtctctcaccaaaccacaacacaa 8112356  T
Q  103 cgttttgtcccacgtacaagttgtc-gaaaataccaaaatagcatttt 149  Q
    | |||||| |||  ||||| | |||  |||||||||||||| ||||||    
T  8112355 ctttttgttccagatacaaatagtctaaaaataccaaaataacatttt 8112308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 41366048 - 41366189
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||||| |||| |||||||| ||| ||||||||||||||||  ||   || ||||||||  | |||||||||||||||||||||||| |||||     
T  41366048 tgtttgatttgtgaaacagtttcagggacatgacaaactggaggcaagagat--aggacaaaaactgaaatttttgtccctcaccaaaccacaacacaat 41366145  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcatt 147  Q
     ||||||| ||| ||||||||||| |||||||||||||| ||||    
T  41366146 tttttgtctcacatacaagttgtctaaaataccaaaataacatt 41366189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 27462737 - 27462899
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| || ||| |||| ||| |||||| |   ||||||||||||||||||||||||| |||    
T  27462737 cagtgtttgatttgtaaaactgttttaggtacatgacaaactgtagacaagggac-aag-acaaaagctgttatttttgtccctcaccaaaccacaacac 27462834  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgta 167  Q
    ||| |||| || | | ||||  ||||| |||||||||||||||||||| || |||| ||||||||||    
T  27462835 aactttttatcac-catacatattgtcaaaaataccaaaatagcatttcgt-gccctaaaaatcgta 27462899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 12939293 - 12939395
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    ||||||||  |||||||||||| ||||||||||||| |||||| |||| || ||||||||||||||| || ||||||||||| ||||||||| |||||||    
T  12939293 acaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaataacattttgtc-ccccaaa 12939391  T
Q  161 aatc 164  Q
    ||||    
T  12939392 aatc 12939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 30713015 - 30712866
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcacca----aaccaca 96  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||||||||| ||||  || ||| ||||  | |||||||||||||||||    |||||||    
T  30713015 cagtgtttgatttgtaatactgtttcagggacagaacaacctggaggcaagggac--aggacacaaactgaaatttttgtccctcaccaaattaaccaca 30712918  T
Q  97 tcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
     |||||| |||| ||||||||| |||||||| |||| ||||||||| |||||    
T  30712917 acacaactttttatcccacgtagaagttgtctaaaacaccaaaatatcattt 30712866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 1247244 - 1247171
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaata 134  Q
    |||||| | ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||    
T  1247244 acaaaatctcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37863301 - 37863349
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37863301 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 37863349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 13829563 - 13829448
Alignment:
Q  31 acaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaa 130  Q
    ||||||||||||||||| || ||||  || ||||||||  | |||||||||| |||| | ||||||||||||| |||||||||| ||||||||| || ||    
T  13829563 acaggacaaactggaggtaagggac--aggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaa 13829466  T
Q  131 aataccaaaatagcattt 148  Q
    || ||||||||| |||||    
T  13829465 aacaccaaaatatcattt 13829448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 41934735 - 41934587
Alignment:
Q  2 agtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcaca 101  Q
    ||||| ||||||||||||||| || ||| |   || |||||||| ||||| ||| ||| ||||||||  | ||| |||| | |||| |||||||| ||||    
T  41934735 agtgtgtgatttgtaaaactgattaagggatgagataaactggatgcaaaagac-aag-acaaaaactgaaattcttgtacttcactaaaccacaacaca 41934638  T
Q  102 acgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    || |||||||| ||||| |||||||| |||||||||||||| |||||||||    
T  41934637 actttttgtcctacgtataagttgtctaaaataccaaaataacattttgtc 41934587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 45463111 - 45463208
Alignment:
Q  69 acatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||||||||||||| |||||||||||||| |||||| |||||||  |||||||  ||||| |||||| ||||||| ||||| ||  ||||| |||||||||    
T  45463111 acatatttttgtcactcaccaaaccacaacacaactttttgtcatacgtacagattgtctaaaatatcaaaataacatttcgt--ccccagaaatcgtat 45463208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9717356 - 9717317
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaa 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9717356 cagtgtttgatttgtaaaactgtttcaggtacaggacaaa 9717317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 15303180 - 15303308
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaacgt 105  Q
    ||||||||||||||||| |||||  |||||||||||| |||||||  |||  |  ||||||||| | |||||||||| | | ||||| |||||||||| |    
T  15303180 tttgatttgtaaaactgcttcagagacaggacaaactagaggcaa--gacacatgacaaaaacataaatttttgtcctttatcaaactacatcacaactt 15303277  T
Q  106 tttgtcccacgtacaagttgtcgaaaatacc 136  Q
    ||||| |||| |  |||||||| ||||||||    
T  15303278 tttgttccacatgtaagttgtctaaaatacc 15303308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 18279053 - 18278934
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    |||||||||| ||||| ||||| ||| ||| |||||||||||| ||||||||   ||||||||||  | |||||||| |||||| ||| ||| |||||||    
T  18279053 tgtttgatttataaaa-tgttttagggacaagacaaactggagacaaaggac--ggcacaaaaactaaaatttttgttcctcactaaatcacgtcacaac 18278957  T
Q  104 gttttgtcccacgtacaagttgt 126  Q
     ||||||| ||| ||||| ||||    
T  18278956 tttttgtctcacatacaaattgt 18278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 18793228 - 18793267
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaa 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18793228 cagtgtttgatttgtaaaactgtttcaggtacagtacaaa 18793267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 26796313 - 26796247
Alignment:
Q  73 atttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaa 139  Q
    |||| |||||||||| ||| |||| | |||| ||||||| ||||||||||||||| |||||||||||    
T  26796313 atttgtgtccctcactaaagcacaacgcaactttttgtcacacgtacaagttgtctaaaataccaaa 26796247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 45463063 - 45463107
Alignment:
Q  6 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 50  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||    
T  45463063 tttgatttgtaaaactgcttcaggtacaagacaaacaggaggcaa 45463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 152
Target Start/End: Original strand, 18793306 - 18793345
Alignment:
Q  113 cacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  18793306 cacgtacaagttgtctaaaataccaaaataacattttgtc 18793345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 35473037 - 35473084
Alignment:
Q  105 ttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||||||||||||||||||||||| ||||||||| |||| | |||||||    
T  35473037 ttttgtcccacgtacaagttgtctaaaataccataatatccttttgtc 35473084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 20907664 - 20907581
Alignment:
Q  83 ctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgta 167  Q
    ||||||||||||||  ||||  |||||||| | |||||| ||||  ||||||| |||||| |||||| || ||||||||||||||    
T  20907664 ctcaccaaaccacagaacaattttttgtcctatgtacaaattgtataaaatactaaaataacattttatc-ccccaaaaatcgta 20907581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37003826 - 37003858
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtaca 33  Q
    |||||||||||||||||| ||||||||||||||    
T  37003826 cagtgtttgatttgtaaatctgtttcaggtaca 37003858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17995 - 18159
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  17995 cagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 18092  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  18093 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaaaatcgtat 18159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 12535 - 12641
Alignment:
Q  61 acaaaaacacatatttttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaa 160  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  12535 acaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc-cctcaaa 12633  T
Q  161 aatcgtat 168  Q
    ||||||||    
T  12634 aatcgtat 12641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 2279 - 2428
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  2279 cagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacagcac 2376  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| |||||||||||||||  |||||||    
T  2377 aactttttgtcccacgtacaagttgtctaaaataccaaaatagttttttgtc 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 102104 - 101955
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||    
T  102104 cagtgtttgatttgtaaaactgtttcatgtacaggacaacttggaggcaacggac--atgacaaaaactcatatttttgtccctcaccaaaccacatcac 102007  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  102006 aactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtc 101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15327 - 15167
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||||| |||||||||||| |||    
T  15327 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggac-aag-acaaaaactcatatttttgtcccccaccaaaccacaacac 15230  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatc 164  Q
    ||| ||||||| ||||||||||||||| ||||||| ||||||| |||||||| |||||||||||    
T  15229 aactttttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtc-ccccaaaaatc 15167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5380 - 5545
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaa-acacatatttttgtccctcaccaaaccacatca 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  || |||||| |||||||||||||||||||||||||||||||||    
T  5380 cagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggac--aggacaaaaaacacatatttttgtccctcaccaaaccacatca 5477  T
Q  100 caacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    |||| ||||||||||| ||||||||| | ||||||| |||||| ||||| |  ||||||||||||||||    
T  5478 caactttttgtcccacatacaagttgcctaaaatacaaaaataacatttcg-agccccaaaaatcgtat 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 51593 - 51430
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| |||| |||| ||| |||||||| |||||||||||||||||| |||||||| |||    
T  51593 cagtgtttgatttgtaaaactgtttcaggtgcagaacaaactggatgcaagggac-aag-acaaaaactcatatttttgtccctcac-aaaccacagcac 51497  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||    
T  51496 aactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtc-cctcaaaaatcgtat 51430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23730 - 23586
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |  |||||||| ||||||||||||| ||||||||||||| |||    
T  23730 cagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggac--atgacaaaaactcatatttttgtccttcaccaaaccacagcac 23633  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatt 147  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  23632 aactttttgtcccacgtacaagttgtctaaaataccaaaataacatt 23586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 2437 - 2600
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| || ||||  || |||||||| ||||| ||||||||| ||||||||||| |||    
T  2437 cagtgtttgatttgtaaaactgtttcaggtacaagacaaattggaggaaagggac--aggacaaaaactcatatctttgtccctaaccaaaccacaacac 2534  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
    ||| | ||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  2535 aac-tattgtctcacgtacaagttgtctaaaataccaaaatagcattttgtc-ccccaaaaatcgtat 2600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 372908 - 373069
Alignment:
Q  4 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcacaac 103  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||| ||| || | |||||||| ||||||||||||||||||||||||| | ||||||    
T  372908 tgtttgatttgtaaaactgtttcaggtacagaaaaaactggagacaaggga-tatg-acaaaaactcatatttttgtccctcaccaaaccataacacaac 373005  T
Q  104 gttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtcgccccaaaaatcgtat 168  Q
     ||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||    
T  373006 tttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtc-cctcaaaaatcgtat 373069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15314 - 15467
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacta------agcacaaaaacacatatttttgtccctcaccaaacca 94  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |      |  |||||||| |||||||||||||||||||||||||    
T  15314 cagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagatcacatgacaaaaactcatatttttgtccctcaccaaacca 15413  T
Q  95 catcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    || |||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  15414 caacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattt 15467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 13615 - 13669
Alignment:
Q  98 cacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||| ||||||| || |||||||||||| | ||||||||||||| ||||||||    
T  13615 cacaactttttgtcacatgtacaagttgtctagaataccaaaatagtattttgtc 13669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19033 - 19180
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  |||  || |||||| | |||||||||||||||||||||| |||| |||    
T  19033 cagtgtttgatttgtaaaactgtt-caggtacaggacaaactggaggcaagagac--aggacaaaa-ctcatatttttgtccctcaccaaatcacagcac 19128  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  19129 aactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 19180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 1584 - 1729
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||||| |||| ||| ||||||||  | |||||||||||||||||||||||| |||    
T  1584 cagtgtttgatttgtaaaactgtttcaaggataggacaaactggaggcaagggac-aag-acaaaaactgaaatttttgtccctcaccaaaccacaacac 1681  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattt 148  Q
    ||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  1682 aactttttgtcccacgtacaagttgtctaaaaaaccaaaatagcattt 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 42891 - 43039
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||  || ||||||||  | |||| ||||||||||||||||||| |||    
T  42891 cagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggac--agaacaaaaactgaaatttgtgtccctcaccaaaccacaacac 42988  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| ||||||||||||||||| ||||| |||| ||||||||||||| |||||    
T  42989 aactttttgtcccacgtacaa-ttgtctaaaacaccaaaatagcatgttgtc 43039  T

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Target: scaffold0729 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 4520 - 4669
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| || || ||||| || ||||| ||||||||| ||||  || |||||||| ||||||||||||||||||||||||||| |||    
T  4520 cagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggac--aggacaaaaactcatatttttgtccctcaccaaaccacaacac 4617  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    ||| |||||||||||||| |||||||| |||| | ||||||| |||||||||    
T  4618 aactttttgtcccacgtaaaagttgtctaaaacatcaaaatatcattttgtc 4669  T

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Target: scaffold0280 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 13628 - 13772
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||| |||   || ||||||||  | ||||||||||||||||||||||||  ||    
T  13628 cagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggat--aggacaaaaactgaaatttttgtccctcaccaaaccacagtac 13725  T
Q  101 aacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcatt 147  Q
    ||| ||||||||||| ||||||||||| |||| ||||||||||||||    
T  13726 aactttttgtcccacttacaagttgtctaaaacaccaaaatagcatt 13772  T

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Target: scaffold0155 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 33559 - 33634
Alignment:
Q  77 ttgtccctcaccaaaccacatcacaacgttttgtcccacgtacaagttgtcgaaaataccaaaatagcattttgtc 152  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||| ||||  |||||||||||||||  |||||||    
T  33559 ttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttttgtc 33634  T

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Target: scaffold0047 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19097 - 19205
Alignment:
Q  1 cagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggactaagcacaaaaacacatatttttgtccctcaccaaaccacatcac 100  Q
    ||||||||||||||||||||||||||||| |||| | |||| |||||||| ||||  || ||||||||  | |||||||||||||| |||| | || |||    
T  19097 cagtgtttgatttgtaaaactgtttcagggacagaataaacaggaggcaatggac--aggacaaaaactgaaatttttgtccctcatcaaagctcaacac 19194  T
Q  101 aacgttttgtc 111  Q
    ||| |||||||    
T  19195 aactttttgtc 19205  T

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