View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14964_low_20 (Length: 249)
Name: NF14964_low_20
Description: NF14964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14964_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26498662 - 26498428
Alignment:
| Q |
1 |
cgaaggcgaagtcatggtttccagctaagaacacatgtttttgattcggataacgggttggtaatgctataagaaaatcaattacttggcgggtgtgagg |
100 |
Q |
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| T |
26498662 |
cgaaggcgaagtcatggtttccagctaggaacacatgtttttgattcgggtaacgggtcggtaatgctataaggaaatcaattacttggcgggtgtgagg |
26498563 |
T |
|
| Q |
101 |
tcctctgtcacagtaatcacctaagaagatgatagtggctgttttgaattgtgatggttcgacggtgttttcgagatttgaccataggttttgtagcttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26498562 |
tcctctgtcacagtaatcacctaagaagatgatagtggctgttttgaattgtgatggttcgacggtgttttcgagatttgaccataggttttgtagcttg |
26498463 |
T |
|
| Q |
201 |
tcaatgaaaccgtggatgtcaccgatgcagcatac |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
26498462 |
tcaatgaaaccgtggatgtcaccgatgcagcatac |
26498428 |
T |
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