View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14964_low_21 (Length: 245)
Name: NF14964_low_21
Description: NF14964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14964_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 44678440 - 44678532
Alignment:
| Q |
141 |
taataatagtgatacctgcatttttgggcaatgacctccaagaaccttccccgtttgccttaacatattgggtcaaaatttcatcctcctctg |
233 |
Q |
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| T |
44678440 |
taataatagtgatacctgcatttttgggcaatgacctccaagaaccttccccatttgccttaacatattgggtcaaaatttcatcctcctctg |
44678532 |
T |
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Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 44678317 - 44678375
Alignment:
| Q |
17 |
aatagttaatccatcttaatctacaacttttaccacatcgaagcaaaccttcaaacccc |
75 |
Q |
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| T |
44678317 |
aatagttaatccatcttaatctacaacttttaccacatctaagcaaaccttcaaacccc |
44678375 |
T |
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