View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14964_low_3 (Length: 632)

Name: NF14964_low_3
Description: NF14964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14964_low_3
NF14964_low_3
[»] chr6 (29 HSPs)
chr6 (356-588)||(9576570-9576802)
chr6 (109-370)||(9576298-9576559)
chr6 (51-223)||(11590899-11591071)
chr6 (41-142)||(11590764-11590865)
chr6 (51-160)||(8313264-8313373)
chr6 (25-127)||(8313237-8313339)
chr6 (68-133)||(11590576-11590641)
chr6 (51-160)||(8313324-8313434)
chr6 (51-151)||(11590714-11590814)
chr6 (109-163)||(11590897-11590951)
chr6 (109-157)||(8313388-8313436)
chr6 (108-195)||(29863509-29863597)
chr6 (214-271)||(18676041-18676098)
chr6 (79-163)||(9224990-9225074)
chr6 (51-103)||(9576300-9576352)
chr6 (25-93)||(11590933-11591001)
chr6 (108-195)||(34475606-34475694)
chr6 (103-160)||(9576256-9576313)
chr6 (51-103)||(9576264-9576316)
chr6 (219-279)||(25143654-25143714)
chr6 (214-254)||(28913528-28913568)
chr6 (214-253)||(33490393-33490432)
chr6 (51-100)||(8933475-8933522)
chr6 (594-632)||(9576794-9576832)
chr6 (51-100)||(33130803-33130850)
chr6 (138-198)||(8063354-8063415)
chr6 (51-100)||(29863545-29863594)
chr6 (108-160)||(8313529-8313581)
chr6 (25-93)||(9224996-9225064)
[»] chr8 (29 HSPs)
chr8 (51-160)||(18575466-18575575)
chr8 (24-283)||(18575499-18575755)
chr8 (217-278)||(1103858-1103919)
chr8 (108-195)||(20187934-20188022)
chr8 (108-195)||(20207003-20207091)
chr8 (103-160)||(18575458-18575515)
chr8 (214-271)||(29998399-29998456)
chr8 (214-271)||(30699333-30699390)
chr8 (108-200)||(5458865-5458958)
chr8 (214-271)||(35392843-35392900)
chr8 (108-195)||(12987122-12987210)
chr8 (214-270)||(36782286-36782342)
chr8 (51-90)||(1104604-1104643)
chr8 (109-160)||(18575392-18575443)
chr8 (215-281)||(5459310-5459376)
chr8 (108-160)||(482767-482819)
chr8 (108-195)||(30656303-30656391)
chr8 (108-160)||(30699624-30699676)
chr8 (108-195)||(35393094-35393182)
chr8 (224-271)||(11021128-11021175)
chr8 (108-163)||(18575427-18575482)
chr8 (110-195)||(1104630-1104716)
chr8 (51-100)||(38098422-38098469)
chr8 (51-100)||(45084596-45084643)
chr8 (214-271)||(482432-482488)
chr8 (51-100)||(30699624-30699673)
chr8 (214-254)||(12987489-12987529)
chr8 (214-278)||(13175828-13175891)
chr8 (138-197)||(39780866-39780926)
[»] chr4 (52 HSPs)
chr4 (25-159)||(31445273-31445407)
chr4 (25-124)||(31445333-31445431)
chr4 (216-285)||(31445437-31445506)
chr4 (214-283)||(44879002-44879071)
chr4 (108-195)||(45885358-45885446)
chr4 (51-195)||(55281938-55282095)
chr4 (51-160)||(31445238-31445348)
chr4 (214-271)||(7553489-7553546)
chr4 (214-271)||(39677084-39677141)
chr4 (108-195)||(29924064-29924152)
chr4 (108-195)||(55282010-55282098)
chr4 (214-281)||(11309999-11310066)
chr4 (214-271)||(3930978-3931035)
chr4 (112-157)||(31445167-31445212)
chr4 (108-195)||(3875202-3875290)
chr4 (108-195)||(11309581-11309669)
chr4 (219-283)||(23114498-23114562)
chr4 (108-195)||(24744522-24744610)
chr4 (108-195)||(28867251-28867339)
chr4 (108-195)||(45885021-45885109)
chr4 (108-194)||(48868523-48868610)
chr4 (214-287)||(11379886-11379957)
chr4 (51-100)||(7553719-7553768)
chr4 (108-200)||(11381068-11381161)
chr4 (214-271)||(33115426-33115483)
chr4 (103-195)||(44878567-44878660)
chr4 (214-271)||(45885729-45885786)
chr4 (108-199)||(11381490-11381582)
chr4 (48-100)||(36432060-36432112)
chr4 (108-195)||(50622126-50622214)
chr4 (52-103)||(31445167-31445218)
chr4 (109-195)||(36308599-36308682)
chr4 (108-150)||(7553922-7553964)
chr4 (214-264)||(24744386-24744436)
chr4 (51-100)||(27767262-27767309)
chr4 (51-100)||(29933168-29933215)
chr4 (138-195)||(33961258-33961316)
chr4 (51-100)||(35949137-35949184)
chr4 (51-100)||(49331758-49331805)
chr4 (51-100)||(56162888-56162935)
chr4 (51-100)||(3875238-3875287)
chr4 (51-100)||(28867287-28867336)
chr4 (51-100)||(29924067-29924116)
chr4 (108-160)||(29933168-29933218)
chr4 (103-160)||(44878675-44878732)
chr4 (51-100)||(45885024-45885073)
chr4 (51-100)||(48868558-48868607)
chr4 (214-271)||(50622408-50622464)
chr4 (108-160)||(28573149-28573201)
chr4 (214-254)||(41763478-41763518)
chr4 (108-195)||(45885093-45885181)
chr4 (227-271)||(49331297-49331341)
[»] chr3 (70 HSPs)
chr3 (58-163)||(35512697-35512802)
chr3 (175-284)||(35512547-35512660)
chr3 (79-195)||(44378168-44378286)
chr3 (214-271)||(2446659-2446716)
chr3 (51-124)||(35512640-35512713)
chr3 (108-195)||(3019662-3019750)
chr3 (108-195)||(10470902-10470990)
chr3 (108-195)||(26975063-26975151)
chr3 (214-284)||(41457521-41457591)
chr3 (214-271)||(1545341-1545398)
chr3 (103-195)||(10659987-10660080)
chr3 (103-195)||(23151103-23151196)
chr3 (214-271)||(33584056-33584113)
chr3 (214-271)||(51166528-51166585)
chr3 (108-195)||(5273159-5273247)
chr3 (108-160)||(8828013-8828065)
chr3 (108-160)||(24349729-24349781)
chr3 (108-195)||(27449953-27450041)
chr3 (108-195)||(37126219-37126307)
chr3 (108-195)||(37821523-37821611)
chr3 (108-195)||(46528560-46528648)
chr3 (108-160)||(46529020-46529072)
chr3 (51-86)||(41456950-41456985)
chr3 (108-146)||(502366-502404)
chr3 (108-193)||(2446423-2446509)
chr3 (110-195)||(41454599-41454685)
chr3 (108-193)||(44378505-44378591)
chr3 (51-100)||(1545798-1545847)
chr3 (214-271)||(5272847-5272904)
chr3 (51-100)||(8828013-8828062)
chr3 (214-271)||(10660316-10660373)
chr3 (25-98)||(35512702-35512775)
chr3 (214-271)||(51755108-51755165)
chr3 (108-195)||(502294-502382)
chr3 (108-160)||(8828191-8828243)
chr3 (227-271)||(13287893-13287937)
chr3 (108-195)||(20607279-20607367)
chr3 (108-195)||(24406241-24406329)
chr3 (214-254)||(46529243-46529283)
chr3 (108-160)||(51754885-51754937)
chr3 (108-159)||(502121-502172)
chr3 (224-271)||(9746567-9746614)
chr3 (224-271)||(26717153-26717200)
chr3 (109-194)||(41113680-41113764)
chr3 (51-90)||(41454672-41454711)
chr3 (51-100)||(22497654-22497701)
chr3 (138-195)||(23151367-23151425)
chr3 (214-271)||(37125918-37125976)
chr3 (51-100)||(43219170-43219217)
chr3 (138-195)||(44378308-44378366)
chr3 (51-100)||(48478122-48478169)
chr3 (51-100)||(53019395-53019442)
chr3 (51-100)||(53019632-53019679)
chr3 (214-279)||(502417-502482)
chr3 (51-100)||(2446426-2446475)
chr3 (51-100)||(8828191-8828240)
chr3 (51-100)||(10659995-10660044)
chr3 (51-100)||(23151111-23151160)
chr3 (51-100)||(24349268-24349317)
chr3 (51-100)||(27449956-27450005)
chr3 (51-100)||(37126255-37126304)
chr3 (51-100)||(37821526-37821575)
chr3 (51-100)||(44378508-44378557)
chr3 (51-100)||(46528563-46528612)
chr3 (51-100)||(51754888-51754937)
chr3 (214-283)||(52009232-52009301)
chr3 (51-99)||(502124-502172)
chr3 (214-254)||(8067878-8067918)
chr3 (222-270)||(12227172-12227219)
chr3 (51-103)||(41454600-41454652)
[»] chr5 (29 HSPs)
chr5 (108-196)||(41742936-41743025)
chr5 (217-284)||(16321127-16321194)
chr5 (214-284)||(11255350-11255419)
chr5 (214-271)||(25032061-25032118)
chr5 (108-195)||(6230677-6230765)
chr5 (108-195)||(8836108-8836196)
chr5 (214-254)||(31377557-31377597)
chr5 (110-195)||(25031889-25031975)
chr5 (224-269)||(28349753-28349798)
chr5 (214-271)||(33591284-33591341)
chr5 (108-160)||(8335784-8335836)
chr5 (108-160)||(8335892-8335944)
chr5 (108-195)||(8781933-8782021)
chr5 (108-160)||(15472283-15472335)
chr5 (108-195)||(18186212-18186300)
chr5 (108-160)||(29296654-29296706)
chr5 (108-194)||(18617871-18617958)
chr5 (214-277)||(41742786-41742849)
chr5 (51-100)||(36484266-36484313)
chr5 (51-100)||(6230680-6230729)
chr5 (51-100)||(8335787-8335836)
chr5 (51-100)||(8335895-8335944)
chr5 (51-100)||(8836144-8836193)
chr5 (51-100)||(15472283-15472332)
chr5 (51-100)||(25031890-25031939)
chr5 (51-100)||(29296657-29296706)
chr5 (214-254)||(6231001-6231041)
chr5 (214-254)||(8835861-8835901)
chr5 (214-270)||(10691329-10691385)
[»] chr2 (28 HSPs)
chr2 (214-271)||(21866523-21866580)
chr2 (108-195)||(11979174-11979262)
chr2 (214-271)||(26479096-26479153)
chr2 (108-195)||(1222014-1222102)
chr2 (108-160)||(2371724-2371776)
chr2 (108-195)||(14286836-14286924)
chr2 (108-195)||(20115524-20115612)
chr2 (119-195)||(2357810-2357887)
chr2 (103-160)||(31546894-31546951)
chr2 (222-286)||(18377230-18377294)
chr2 (108-195)||(30786719-30786807)
chr2 (214-253)||(2371423-2371462)
chr2 (51-100)||(2379865-2379912)
chr2 (51-100)||(19390236-19390283)
chr2 (51-100)||(1222050-1222099)
chr2 (51-100)||(11979177-11979226)
chr2 (222-271)||(12243224-12243273)
chr2 (214-271)||(14286621-14286678)
chr2 (51-100)||(14286872-14286921)
chr2 (51-100)||(20115527-20115576)
chr2 (214-271)||(31546603-31546660)
chr2 (51-100)||(31546894-31546943)
chr2 (214-254)||(2358094-2358134)
chr2 (108-160)||(11123941-11123993)
chr2 (108-160)||(14287072-14287124)
chr2 (108-160)||(26479465-26479517)
chr2 (214-250)||(30786633-30786669)
chr2 (214-254)||(39429256-39429296)
[»] chr7 (37 HSPs)
chr7 (108-195)||(44291515-44291603)
chr7 (108-195)||(44509341-44509429)
chr7 (108-199)||(25105438-25105531)
chr7 (214-271)||(44509515-44509572)
chr7 (108-195)||(5543885-5543973)
chr7 (108-195)||(9740846-9740934)
chr7 (108-195)||(12848903-12848991)
chr7 (108-195)||(18676337-18676425)
chr7 (108-195)||(31587499-31587587)
chr7 (108-195)||(31622380-31622468)
chr7 (213-277)||(35598441-35598505)
chr7 (108-160)||(40186323-40186375)
chr7 (214-271)||(9740553-9740610)
chr7 (103-160)||(18676180-18676237)
chr7 (214-271)||(31587128-31587185)
chr7 (214-271)||(31622675-31622731)
chr7 (214-271)||(38742490-38742547)
chr7 (108-160)||(38742846-38742898)
chr7 (108-195)||(47020050-47020138)
chr7 (51-100)||(40430941-40430988)
chr7 (51-100)||(42076749-42076796)
chr7 (214-271)||(5543585-5543642)
chr7 (51-100)||(5543921-5543970)
chr7 (51-100)||(9740882-9740931)
chr7 (51-100)||(12848906-12848955)
chr7 (51-100)||(18676180-18676229)
chr7 (51-100)||(18676373-18676422)
chr7 (51-100)||(25105441-25105490)
chr7 (111-160)||(25105622-25105671)
chr7 (51-100)||(31587535-31587584)
chr7 (51-100)||(31622383-31622432)
chr7 (51-100)||(38742846-38742895)
chr7 (214-271)||(47019871-47019928)
chr7 (214-271)||(47455772-47455829)
chr7 (48-100)||(25105619-25105671)
chr7 (51-103)||(35598714-35598766)
chr7 (214-254)||(40186004-40186044)
[»] chr1 (51 HSPs)
chr1 (214-281)||(17924993-17925060)
chr1 (108-195)||(3770930-3771018)
chr1 (108-195)||(28225919-28226007)
chr1 (108-160)||(11335338-11335390)
chr1 (108-160)||(11493358-11493410)
chr1 (108-195)||(15475556-15475644)
chr1 (108-195)||(24179807-24179895)
chr1 (108-195)||(30361617-30361705)
chr1 (108-195)||(37093410-37093498)
chr1 (51-86)||(18605358-18605393)
chr1 (51-100)||(28068441-28068490)
chr1 (214-271)||(49740626-49740683)
chr1 (214-271)||(50501439-50501496)
chr1 (108-160)||(3047224-3047276)
chr1 (214-254)||(8896266-8896306)
chr1 (108-160)||(15907701-15907753)
chr1 (214-254)||(15910429-15910469)
chr1 (214-254)||(28068315-28068355)
chr1 (108-160)||(44054429-44054481)
chr1 (108-160)||(46233964-46234016)
chr1 (224-271)||(3416932-3416979)
chr1 (219-285)||(17137563-17137630)
chr1 (51-90)||(18605284-18605323)
chr1 (109-160)||(52469117-52469168)
chr1 (51-100)||(13556486-13556533)
chr1 (225-271)||(17580506-17580552)
chr1 (110-195)||(18605501-18605587)
chr1 (214-284)||(18605961-18606031)
chr1 (51-100)||(24180225-24180272)
chr1 (51-100)||(40360080-40360127)
chr1 (138-195)||(45501869-45501927)
chr1 (51-100)||(46675158-46675205)
chr1 (51-100)||(47534414-47534461)
chr1 (51-100)||(3047227-3047276)
chr1 (51-100)||(3770933-3770982)
chr1 (214-271)||(3994408-3994465)
chr1 (108-160)||(13556483-13556533)
chr1 (51-100)||(15475592-15475641)
chr1 (51-100)||(15907704-15907753)
chr1 (110-159)||(18605211-18605260)
chr1 (51-100)||(24179843-24179892)
chr1 (51-100)||(30361620-30361669)
chr1 (51-100)||(37093446-37093495)
chr1 (51-100)||(44054429-44054478)
chr1 (214-271)||(46233625-46233681)
chr1 (214-271)||(49457544-49457601)
chr1 (51-100)||(52469117-52469166)
chr1 (108-199)||(17925816-17925908)
chr1 (51-99)||(18605212-18605260)
chr1 (112-195)||(29033241-29033325)
chr1 (108-195)||(37093748-37093836)
[»] scaffold0041 (3 HSPs)
scaffold0041 (108-195)||(105103-105191)
scaffold0041 (108-194)||(105283-105370)
scaffold0041 (51-100)||(105139-105188)
[»] scaffold0548 (1 HSPs)
scaffold0548 (214-281)||(8336-8403)
[»] scaffold1360 (3 HSPs)
scaffold1360 (214-271)||(358-415)
scaffold1360 (103-195)||(613-706)
scaffold1360 (51-100)||(649-698)
[»] scaffold0562 (2 HSPs)
scaffold0562 (108-195)||(6021-6109)
scaffold0562 (51-100)||(6057-6106)
[»] scaffold0081 (4 HSPs)
scaffold0081 (214-284)||(12218-12287)
scaffold0081 (110-200)||(11464-11555)
scaffold0081 (51-90)||(11537-11576)
scaffold0081 (51-83)||(11611-11643)
[»] scaffold0057 (1 HSPs)
scaffold0057 (214-271)||(42029-42086)
[»] scaffold0189 (3 HSPs)
scaffold0189 (51-100)||(26940-26987)
scaffold0189 (51-100)||(27213-27260)
scaffold0189 (51-100)||(27486-27533)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 356 - 588
Target Start/End: Original strand, 9576570 - 9576802
Alignment:
Q  356 aacatattagatattaaaaggtcatggttgaaaatcggtctaaaatctttcatagaatatggctgcattttgaagtgacggaaaattttgactcgacaag 455  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  9576570 aacatattagatattaaaaggtcatggttgaaattcggtctaaaatatttcataaaatatggctgcattttgaagtgacggtaatttttgactcgacaag 9576669  T
Q  456 taaaattcatatgaacttagaattcaaataagtttgtaattttctacaaagaaattatttgtgcgaatattttacccacacatgtattttattccataaa 555  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  9576670 taaaattcatatgaacttagaattcaaataagtttgtaattttctacaaagaaattatttgtgcgaatattttccccacagatgtattttattccataaa 9576769  T
Q  556 ataacattccatgagttcatggaaatttatcgt 588  Q
    |||||||||||||||||||||||||||||||||    
T  9576770 ataacattccatgagttcatggaaatttatcgt 9576802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 109 - 370
Target Start/End: Original strand, 9576298 - 9576559
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaattaggttattgtaaattcagtttacatataagattagt 208  Q
    |||||| |||||||||||||||||| ||||||||| |||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||    
T  9576298 tgtaaactcagtttacgtatgtatataagaggttagtgtaaactcagtttacgtaaatacaattaagttattgtaaattcagtttacatataaggtcagt 9576397  T
Q  209 gtaaatttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtctattttgtattgtcttatatgttgt 308  Q
    |||||||||||||||||||||||| || |||||   |||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  9576398 gtaaatttagttaaagggtatattagttattctagggtgtaatttgggttttttggggtgtgagtagtatctatctattttgaattgtcttatatgttgt 9576497  T
Q  309 ctagtaatgaagtgatttgatacttttataagataaaatatatgcataacatattagatatt 370  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9576498 ctattaatgaagtgatttgatacttttataagataaaatatatgcataatatattagatatt 9576559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 11590899 - 11591071
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaa 150  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||| |||| ||||||||| ||||||    
T  11590899 taaattcagtttacgtatgtatataagaggttagtgtaaactcagtttacatagttaatgtaaattcagtttacgtatttatataagaggttagtgtaaa 11590998  T
Q  151 ctaagtttacataaatacaattaggttattgtaaattcagtttacatataagattagtgtaaatttagttaaa 223  Q
    || |  |||||||| |||||||||||||||||||||||||||||||||  || ||| |||||||||| |||||    
T  11590999 ctcaaattacataagtacaattaggttattgtaaattcagtttacataagaggttattgtaaatttaattaaa 11591071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 11590764 - 11590865
Alignment:
Q  41 gtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagagg 140  Q
    |||||| || |||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| ||||| | |||||| ||||||    
T  11590764 gtagttaatgtaaattcagtttacatatgtatataagatgttagtgtaaacccggtttacgtagttaatgtaaattcaatttacttgtgtatataagagg 11590863  T
Q  141 tt 142  Q
    ||    
T  11590864 tt 11590865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 8313373 - 8313264
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaa 150  Q
    |||||| ||||||| ||| |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||| | |||| |||| ||||||    
T  8313373 taaatttagtttacgtatatatataagaggttagtgtaaactcagtttacgtagttaatgtaaattaagtttacgtatgtagataagatgttagtgtaaa 8313274  T
Q  151 ctaagtttac 160  Q
     | |||||||    
T  8313273 ttcagtttac 8313264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8313339 - 8313237
Alignment:
Q  25 tgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttac 124  Q
    |||||| || |||||||||||| || |||||| ||||||| |||||| |||||  ||||||||||| || |||||||||||| ||||||||| |||||||    
T  8313339 tgtaaactcagtttacgtagttaatgtaaattaagtttacgtatgtagataagatgttagtgtaaattcagtttacgtagttaatgtaaatttagtttac 8313240  T
Q  125 gta 127  Q
    |||    
T  8313239 gta 8313237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 11590576 - 11590641
Alignment:
Q  68 tgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtata 133  Q
    |||||||||| |||||||||||||||  |||| |||||| ||||||||||||||||||||||||||    
T  11590576 tgtatataagaggttagtgtaaactcaatttatgtagttaatgtaaattcagtttacgtatgtata 11590641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 8313434 - 8313324
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta--gttcatgtaaattcagtttacgtatgtatacaagaggttaatgta 148  Q
    |||||||||||||| |||||||||||| ||||| ||||||||| ||| |||    ||| ||||||||| ||||||||||| |||| ||||||||| ||||    
T  8313434 taaattcagtttacgtatgtatataagaggttaatgtaaactcagtt-acgagaggttaatgtaaatttagtttacgtatatatataagaggttagtgta 8313336  T
Q  149 aactaagtttac 160  Q
    |||| |||||||    
T  8313335 aactcagtttac 8313324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 11590714 - 11590814
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaa 150  Q
    ||||||| |||||  ||||||||| || ||||||||||||||  | ||| |||||| ||||||||||||||||| |||||||| |||| |||| ||||||    
T  11590714 taaattctgtttaagtatgtatatgagaggttagtgtaaacttagattaagtagttaatgtaaattcagtttacatatgtatataagatgttagtgtaaa 11590813  T
Q  151 c 151  Q
    |    
T  11590814 c 11590814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 11590897 - 11590951
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacata 163  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  11590897 tgtaaattcagtttacgtatgtatataagaggttagtgtaaactcagtttacata 11590951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 8313436 - 8313388
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtt 157  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  8313436 tgtaaattcagtttacgtatgtatataagaggttaatgtaaactcagtt 8313388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 29863597 - 29863509
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  29863597 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 29863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 18676098 - 18676041
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  18676098 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 18676041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 9224990 - 9225074
Alignment:
Q  79 ggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacata 163  Q
    ||||||||||||||| ||||||||| || ||||||| |||||| || | | |||| ||||||||| |||||||| | ||||||||    
T  9224990 ggttagtgtaaactcagtttacgtaattaatgtaaactcagttcacatgtatatataagaggttagtgtaaactcaatttacata 9225074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 9576300 - 9576352
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta 103  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  9576300 taaactcagtttacgtatgtatataagaggttagtgtaaactcagtttacgta 9576352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 11590933 - 11591001
Alignment:
Q  25 tgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactc 93  Q
    |||||| || |||||| ||||| || |||||||||||||| ||| |||||||| |||||||||||||||    
T  11590933 tgtaaactcagtttacatagttaatgtaaattcagtttacgtatttatataagaggttagtgtaaactc 11591001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 34475606 - 34475694
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| ||||||||||||||||  |||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  34475606 atgtaaatttagtttacgtatgtatattagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 34475694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 9576256 - 9576313
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||| |||||||||||||||||||||||||| || || ||| |||||||| |||||||    
T  9576256 agttaatgtaaattcagtttacgtatgtatataaaagattagtgtaaactcagtttac 9576313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 9576264 - 9576316
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta 103  Q
    |||||||||||||| |||||||||||  | ||||||||||||| |||||||||    
T  9576264 taaattcagtttacgtatgtatataaaagattagtgtaaactcagtttacgta 9576316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 25143714 - 25143654
Alignment:
Q  219 ttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatc 279  Q
    ||||| |||||||| ||||||| |  ||||| ||||||||||||||||||||| |||||||    
T  25143714 ttaaaaggtatattagtcattcaggggtgtatcttggattttttggggtgtgaatagtatc 25143654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 28913568 - 28913528
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  28913568 tttagttaaaggatatattagtcattctgaagtgtaacttg 28913528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 33490393 - 33490432
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaactt 253  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33490393 tttagttaaagggtatattagtcattctggagtgtaactt 33490432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 8933522 - 8933475
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  8933522 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 8933475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 632
Target Start/End: Original strand, 9576794 - 9576832
Alignment:
Q  594 atttatcgttaaccggtcaaattacaatgttgaatgatt 632  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  9576794 atttatcgttaaccggtcaagttacattgttgaatgatt 9576832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 33130850 - 33130803
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  33130850 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 33130803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 8063354 - 8063415
Alignment:
Q  138 aggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttacata 198  Q
    ||||||||||||| ||||||||| ||  | |||| ||||||| |||||||||||||||||||    
T  8063354 aggttaatgtaaattaagtttacttatgttcaatctaggttaatgtaaattcagtttacata 8063415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 29863594 - 29863545
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  29863594 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 29863545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 8313581 - 8313529
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||||||||||||| |||||| |||||||| | ||||| | |||||||    
T  8313581 atgtaaattcagtttacgtgtgtatataagaggtttacgtaaaatgagtttac 8313529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 9224996 - 9225064
Alignment:
Q  25 tgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactc 93  Q
    |||||| || ||||||||| || || |||| |||||| |||| | |||||||| |||||||||||||||    
T  9224996 tgtaaactcagtttacgtaattaatgtaaactcagttcacatgtatatataagaggttagtgtaaactc 9225064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 18575466 - 18575575
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaa 150  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  18575466 taaattcagtttacatatgtatataagaggttaatgtaaactcagtttacgtagttaatgtaaattcagtttacgtatgtatataagaggttagtgtaaa 18575565  T
Q  151 ctaagtttac 160  Q
    || |||||||    
T  18575566 ctcagtttac 18575575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 283
Target Start/End: Original strand, 18575499 - 18575755
Alignment:
Q  24 atgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta------------gttcatgt 111  Q
    ||||||| || |||||||||||| || |||||||||||||| |||||||||||| ||||||||||||||| |||||||||            ||| ||||    
T  18575499 atgtaaactcagtttacgtagttaatgtaaattcagtttacgtatgtatataagaggttagtgtaaactcagtttacgtatgtatatgagaggttaatgt 18575598  T
Q  112 aaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaataca-attaggttattgtaaattcagtttacatataagattagtgt 210  Q
    ||||| |||||||||||||||| ||||| ||| ||| |||| ||||||| ||  || |   || |||| |||||||||||||||| ||         |||    
T  18575599 aaatttagtttacgtatgtataaaagagattagtgt-aactcagtttacgtatgtatatgataagttaatgtaaattcagtttacgta---------tgt 18575688  T
Q  211 aaatttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtc 283  Q
    ||      ||||||| |||||  |||||||||  |||||||||||||||||||||||||||||||||||||||    
T  18575689 aa------ttaaaggatatatcagtcattctggtgtgtaacttggattttttggggtgtgagtagtatctgtc 18575755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 1103919 - 1103858
Alignment:
Q  217 agttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtat 278  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||    
T  1103919 agttaaagggtatattagtcattctgaagtgtaacttgtgttttttgggatgtgagtagtat 1103858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 20187934 - 20188022
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| ||||||| ||||||||||||||||    
T  20187934 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttatgttcaatctaggttaatgtaaattcagtttac 20188022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 20207003 - 20207091
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| ||||||| ||||||||||||||||    
T  20207003 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttatgttcaatctaggttaatgtaaattcagtttac 20207091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 18575458 - 18575515
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  18575458 agttaatgtaaattcagtttacatatgtatataagaggttaatgtaaactcagtttac 18575515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 29998399 - 29998456
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||    
T  29998399 tttagttaaagggtatattagtcattctgaggtgtaacttgttttttttggggtgtga 29998456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 30699390 - 30699333
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||    
T  30699390 tttagttaaagggtatattagtcattctgaggtgtaacttgttttttttggggtgtga 30699333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 5458865 - 5458958
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttacatata 200  Q
    ||||||||| |||||||||||||||| ||||||||| ||| || | ||||||| ||  | ||| |||||||| |||||||| ||||||||||||    
T  5458865 atgtaaattaagtttacgtatgtatataagaggttagtgtgaattcagtttacttatgttcaatttaggttaatgtaaattaagtttacatata 5458958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 35392900 - 35392843
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  35392900 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 35392843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 12987122 - 12987210
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||| | ||  | |||| ||||||| ||||||||||||||||    
T  12987122 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttccttacgttcaatctaggttaatgtaaattcagtttac 12987210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 36782286 - 36782342
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtg 270  Q
    ||||||||||||||||||| |||||||| | ||||||||||  ||||||||||||||    
T  36782286 tttagttaaagggtatattagtcattctaaggtgtaacttgttttttttggggtgtg 36782342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 1104643 - 1104604
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaa 90  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  1104643 taaattcagtttacttatgtatataagtggttagtgtaaa 1104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 18575392 - 18575443
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||||| |||||||||||||||||| || ||||||||||||||| |||||||    
T  18575392 tgtaaaatcagtttacgtatgtatataaaaggttaatgtaaactcagtttac 18575443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 5459310 - 5459376
Alignment:
Q  215 ttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctg 281  Q
    |||||||||||||||||| |||| ||||  ||||||||||  |||||||| |||||||||| |||||    
T  5459310 ttagttaaagggtatattagtcagtctggggtgtaacttgtgttttttggagtgtgagtagcatctg 5459376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 482819 - 482767
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| | |||| |||||||||    
T  482819 atgtaaatttagtttacgtatgtatataagaggttagtataaattaagtttac 482767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 30656303 - 30656391
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| || ||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  30656303 atgtaaatttagcttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatataggttaatgtaaattaagtttac 30656391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 30699676 - 30699624
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  30699676 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 30699624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 35393182 - 35393094
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| | |||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  35393182 atgtaaatttaatttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 35393094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 11021128 - 11021175
Alignment:
Q  224 gggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||| ||||||||| |||||||||||  |||||||||||||||    
T  11021128 gggtatattagtcattctggagtgtaacttgttttttttggggtgtga 11021175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 18575427 - 18575482
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacata 163  Q
    ||||||| ||||||||||||||||||  ||| ||||||||||| | ||||||||||    
T  18575427 atgtaaactcagtttacgtatgtatatgagaagttaatgtaaattcagtttacata 18575482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 1104716 - 1104630
Alignment:
Q  110 gtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttac 195  Q
    ||||||| ||||||||||||||||  ||| |||| |||||| | ||||||| ||  | ||| |||||||| ||||||||||||||||    
T  1104716 gtaaattaagtttacgtatgtatatgagaagttagtgtaaattcagtttacgtatgttcaatttaggttaatgtaaattcagtttac 1104630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 38098469 - 38098422
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  38098469 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 38098422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 45084596 - 45084643
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  45084596 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 45084643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 482488 - 482432
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||   ||||||||| | |||||||||||||||    
T  482488 tttagttaaagggtatattagtcattctagggtgtaactt-gtttttttggggtgtga 482432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 30699673 - 30699624
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  30699673 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 30699624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 12987489 - 12987529
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||| ||||| |||||||||| ||||||||||    
T  12987489 tttagttaaagggcatattagtcattctgaggtgtaacttg 12987529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 13175828 - 13175891
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtat 278  Q
    |||||||||||| ||||||||||||| | |  ||||| |||| ||||||| ||||||||||||||    
T  13175828 tttagttaaaggatatattggtcatt-tcatatgtaatttgggttttttgaggtgtgagtagtat 13175891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 39780866 - 39780926
Alignment:
Q  138 aggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttacat 197  Q
    ||||||||||||| | ||||||| || || |||| ||||||| ||||||||||||||||||    
T  39780866 aggttaatgtaaatttagtttacttacattcaatctaggttagtgtaaattcagtttacat 39780926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 31445273 - 31445407
Alignment:
Q  25 tgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttac 124  Q
    |||||| || || ||| ||||| |||||||||||||||||||||||||||| | |||||||||||| || |||||||||||| |||||||||||||||||    
T  31445273 tgtaaactcagtatacatagttaatataaattcagtttacatatgtatataggaggttagtgtaaattcagtttacgtagttaatgtaaattcagtttac 31445372  T
Q  125 gtatgtatacaagaggttaatgtaaactaagttta 159  Q
    ||||||||| || |||||| |||||||| ||||||    
T  31445373 gtatgtatataaaaggttagtgtaaactcagttta 31445407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 31445333 - 31445431
Alignment:
Q  25 tgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttac 124  Q
    |||||| || |||||||||||| || |||||||||||||| |||||||||||  ||||||||||||||| ||||| |||| |||||||||||||||||||    
T  31445333 tgtaaattcagtttacgtagttaatgtaaattcagtttacgtatgtatataaaaggttagtgtaaactcagtttatgtag-tcatgtaaattcagtttac 31445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 31445437 - 31445506
Alignment:
Q  216 tagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtcta 285  Q
    ||||||||||||||||| |||||| ||  |||||| |||||||||| |||||||||||||||||||||||    
T  31445437 tagttaaagggtatattagtcattttggggtgtaatttggatttttcggggtgtgagtagtatctgtcta 31445506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 44879002 - 44879071
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtc 283  Q
    ||||||||||||||||||| |||||| || | |||||||||  |||||||||||||||||||||||||||    
T  44879002 tttagttaaagggtatattagtcattatggaatgtaacttgtgttttttggggtgtgagtagtatctgtc 44879071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 45885358 - 45885446
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| |||||||||||||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  45885358 atgtaaatttagtttacgtatgtatataagaggttaatgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 45885446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 195
Target Start/End: Complemental strand, 55282095 - 55281938
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta------------gttcatgtaaattcagtttacgtatgtatacaaga 138  Q
    |||||| ||||||| |||||||||||| |||||||||||| || |||||| ||            ||| |||||||||||||||||||||||||| ||||    
T  55282095 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttacgtatgtatataaga 55281996  T
Q  139 ggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  55281995 ggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 55281938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 31445238 - 31445348
Alignment:
Q  51 taaattcagtttacata-tgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaa 149  Q
    ||||||| |||||| || |||||||||| ||||| ||||||||| || ||| ||||| || |||||||||||||| |||||||| | ||||||| |||||    
T  31445238 taaattccgtttacgtaatgtatataagaggttattgtaaactcagtatacatagttaatataaattcagtttacatatgtatataggaggttagtgtaa 31445337  T
Q  150 actaagtttac 160  Q
    | | |||||||    
T  31445338 attcagtttac 31445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 7553546 - 7553489
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||    
T  7553546 tttagttaaagggtatattagtcattctgaggtgtaacttgttttttttggggtgtga 7553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 39677141 - 39677084
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  39677141 tttagttaaagggtatattagtcattctgaaatgtaacttgttttttttggggtgtga 39677084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 29924064 - 29924152
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  29924064 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 29924152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 55282098 - 55282010
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  55282098 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 55282010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 11309999 - 11310066
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctg 281  Q
    ||||||||||||||||||| |||| ||||  ||||||||||  ||||||||||||||||||| |||||    
T  11309999 tttagttaaagggtatattagtcagtctggggtgtaacttgtgttttttggggtgtgagtagcatctg 11310066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 3931035 - 3930978
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||| ||||||| |||  |||||||||||||||    
T  3931035 tttagttaaagggtatattagtcattctggagtgtaatttgttttttttggggtgtga 3930978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 31445167 - 31445212
Alignment:
Q  112 aaattcagtttacgtatgtatacaagaggttaatgtaaactaagtt 157  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||    
T  31445167 aaattcagtttacgtatgtatataagaggttaatgtaaactcagtt 31445212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 3875290 - 3875202
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  3875290 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 3875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 11309581 - 11309669
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| ||| || | ||||||| || || ||| |||||||| |||||||| |||||||    
T  11309581 atgtaaattaagtttacgtatgtatataagaggttagtgtgaattcagtttacttatattcaatttaggttaatgtaaattaagtttac 11309669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 23114562 - 23114498
Alignment:
Q  219 ttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtc 283  Q
    ||||||| ||||||| | ||| ||  |||||||||| ||||||||||||||||||||||||||||    
T  23114562 ttaaaggatatattgataattttggggtgtaacttgaattttttggggtgtgagtagtatctgtc 23114498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 24744610 - 24744522
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||| |||||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  24744610 atgtaaatttagtttacgtatgtatataagaggtcaatgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 24744522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 28867339 - 28867251
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  28867339 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 28867251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 45885021 - 45885109
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| | ||||| ||||||||||||||||    
T  45885021 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctgggttaatgtaaattcagtttac 45885109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 48868610 - 48868523
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagttta 194  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| ||||||    
T  48868610 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagttta 48868523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 11379957 - 11379886
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtctatt 287  Q
    |||||||||||| |||||| |||| || || ||||||||||  ||||||||||||||||||| ||||| |||||    
T  11379957 tttagttaaaggatatattagtcagtcggaggtgtaacttg--ttttttggggtgtgagtagcatctgcctatt 11379886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 7553768 - 7553719
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| |||||||||||||||||||| |||||||||||| || ||||||    
T  7553768 taaatttagtttacatatgtatataagaggttagtgtaaattcagtttac 7553719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 200
Target Start/End: Complemental strand, 11381161 - 11381068
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttacatata 200  Q
    ||||||||| |||||||||||||||| ||||||||| ||| || | ||||||| ||  | ||| |||||||| |||||||| |||||| |||||    
T  11381161 atgtaaattaagtttacgtatgtatataagaggttagtgtgaattcagtttacttatgttcaatttaggttaatgtaaattaagtttatatata 11381068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 33115483 - 33115426
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||| ||||||| |||||||||  ||||||||||  |||||||||||||||    
T  33115483 tttagttaaagtgtatattagtcattctggggtgtaacttgttttttttggggtgtga 33115426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 44878567 - 44878660
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttac 195  Q
    |||| ||||||||| |||||||||||||||| |||||||||  || || | ||||||||||  | ||| |||||||| |||||||||| |||||    
T  44878567 agttaatgtaaattaagtttacgtatgtatataagaggttagcgtgaattcagtttacatatgttcaatttaggttaatgtaaattcaatttac 44878660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 45885729 - 45885786
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||| ||||||| ||||||||||  |||||||||  |||||||||||||||    
T  45885729 tttagttaaagagtatattagtcattctgagatgtaacttgttttttttggggtgtga 45885786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 11381582 - 11381490
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaatt-aggttattgtaaattcagtttacatat 199  Q
    ||||||||| ||||||||| |||||| ||||||||| ||| || | ||||||| ||  | ||||| |||||| |||||||| |||||||||||    
T  11381582 atgtaaattaagtttacgtgtgtatataagaggttagtgtcaattcagtttacttatgttcaatttaggttaatgtaaattaagtttacatat 11381490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 36432112 - 36432060
Alignment:
Q  48 atataaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  36432112 atataaatttagtttacctatgtatataagaggttagtgtaaattcagtttac 36432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 50622126 - 50622214
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| | |||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  50622126 atgtaaatttaatttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattgagtttac 50622214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 31445167 - 31445218
Alignment:
Q  52 aaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta 103  Q
    ||||||||||||| |||||||||||| ||||| ||||||||| ||| |||||    
T  31445167 aaattcagtttacgtatgtatataagaggttaatgtaaactcagttcacgta 31445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 36308682 - 36308599
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaattaggttattgtaaattcagtttac 195  Q
    ||||||||||||||||  ||||||| ||||||||| |||||| | |||||||||  ||| ||  |||||| ||||||||||||||||    
T  36308682 tgtaaattcagtttac--atgtatataagaggttagtgtaaattcagtttacatgtatataag-aggttagtgtaaattcagtttac 36308599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 7553964 - 7553922
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaa 150  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  7553964 atgtaaatttagtttacgtatgtatataagaggttagtgtaaa 7553922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 24744436 - 24744386
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttgg 264  Q
    |||||||||||||||||||  |||||||| |||||||||||  ||||||||    
T  24744436 tttagttaaagggtatattaatcattctggagtgtaacttgttttttttgg 24744386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 27767309 - 27767262
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  27767309 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 27767262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 29933215 - 29933168
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  29933215 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 29933168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 33961316 - 33961258
Alignment:
Q  138 aggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||| | ||||||| ||||| |||| ||||||| ||||||||||||||||    
T  33961316 aggttaatgtaaattcagtttacttaaattcaatctaggttaatgtaaattcagtttac 33961258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 35949184 - 35949137
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  35949184 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 35949137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 49331805 - 49331758
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  49331805 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 49331758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 56162888 - 56162935
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  56162888 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 56162935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 3875287 - 3875238
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  3875287 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 3875238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 28867336 - 28867287
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  28867336 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 28867287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 29924067 - 29924116
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  29924067 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 29924116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 29933218 - 29933168
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||||||||||||||||  ||||||| ||||||||| |||||||| |||||||    
T  29933218 atgtaaattcagtttac--atgtatataagaggttagtgtaaactcagtttac 29933168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 44878675 - 44878732
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||| ||||||||| |||||||||||||||| ||||||||| ||| || | |||||||    
T  44878675 agttaatgtaaattaagtttacgtatgtatataagaggttattgtgaattcagtttac 44878732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 45885024 - 45885073
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  45885024 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 45885073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 48868607 - 48868558
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  48868607 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 48868558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 50622408 - 50622464
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  |||||||||   |||||||||||||||    
T  50622408 tttagttaaagggtatattagtcattctggggtgtaactt-atttttttggggtgtga 50622464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 28573201 - 28573149
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||| ||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  28573201 atgtagatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 28573149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 41763518 - 41763478
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  41763518 tttagttaaagggtatattagtcattctggggtgtaacttg 41763478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 45885093 - 45885181
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||||||| || ||  |  | ||||||||||||| ||||||||| ||  | |||| ||||||| ||||||||||||||||    
T  45885093 atgtaaattcagtttacttacgttcaatataggttaatgtaaattaagtttacttatgttcaatctaggttaatgtaaattcagtttac 45885181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 49331341 - 49331297
Alignment:
Q  227 tatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||| ||||||||| |||||||||||  |||||||||||||||    
T  49331341 tatattagtcattctggagtgtaacttgttttttttggggtgtga 49331297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 35512802 - 35512697
Alignment:
Q  58 agtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtt 157  Q
    ||||||| |||||||||||| ||||| ||||||||| |||||||||||| |||||| |||||||||||||| |||| ||||| ||| |||||||| ||||    
T  35512802 agtttacgtatgtatataagaggttattgtaaactcagtttacgtagttaatgtaagttcagtttacgtatatatataagagattagtgtaaactcagtt 35512703  T
Q  158 tacata 163  Q
    | ||||    
T  35512702 tgcata 35512697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 35512660 - 35512547
Alignment:
Q  175 gttattgtaaattcagtttacatata--agat--tagtgtaaatttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtg 270  Q
    |||| |||||| ||||||||||||||  ||||  ||||||||||||||||||||| |||||| |||||| ||  ||||||||||| |||||||| |||||    
T  35512660 gttaatgtaaactcagtttacatatataagatgttagtgtaaatttagttaaaggatatattagtcattatggggtgtaacttgggttttttggagtgtg 35512561  T
Q  271 agtagtatctgtct 284  Q
    |||||||| |||||    
T  35512560 agtagtatatgtct 35512547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 44378168 - 44378286
Alignment:
Q  79 ggttagtgtaaactcggtttacgta-gttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggt 176  Q
    |||||||||||| || |||||| || ||| ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| |||||    
T  44378168 ggttagtgtaaattcagtttacttacgttaatgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttacgttcaatctaggt 44378267  T
Q  177 tattgtaaattcagtttac 195  Q
    || |||||||| |||||||    
T  44378268 taatgtaaattaagtttac 44378286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 2446659 - 2446716
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||    
T  2446659 tttagttaaagggtatattagtcattctggagtgtaacttgttttttttggggtgtga 2446716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 35512713 - 35512640
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgtagttcatgtaaattcagtttac 124  Q
    |||| ||||||| ||||||||||||||  ||||||||||||||  ||||||||||| ||||||| |||||||||    
T  35512713 taaactcagtttgcatatgtatataagaagttagtgtaaactcaatttacgtagttaatgtaaactcagtttac 35512640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 3019662 - 3019750
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| ||||||| |||||||| |||||||    
T  3019662 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttacgttcaatctaggttaatgtaaattaagtttac 3019750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 10470990 - 10470902
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||  | |||| ||||||| | ||||||||||||||    
T  10470990 atgtaaatttaatttacgtatgtatataagaggttaatgtaaattaagtttacttacgttcaatctaggttaatataaattcagtttac 10470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 26975151 - 26975063
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| |||| |||| |||||| ||||||||| ||  | |||| ||||||| ||||||||||||||||    
T  26975151 atgtaaatttagtttacgtatgtatataagatgttagtgtaaattaagtttacttacgttcaatctaggttaatgtaaattcagtttac 26975063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 41457521 - 41457591
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtct 284  Q
    |||||||||||| |||||| |||||| ||  ||||||||||  |||||||||||||||||||||| |||||    
T  41457521 tttagttaaaggatatattagtcattatggggtgtaacttgtgttttttggggtgtgagtagtatgtgtct 41457591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 1545398 - 1545341
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  1545398 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 1545341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 10659987 - 10660080
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  10659987 agttaatgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 10660080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 23151103 - 23151196
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  23151103 agtttatgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 23151196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 33584056 - 33584113
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  33584056 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 33584113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 51166585 - 51166528
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  51166585 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 51166528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 5273247 - 5273159
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| ||||||||| |||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  5273247 atgtaaatttagtttacgtgtgtatataagaggttactgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 5273159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 8828065 - 8828013
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  8828065 atgtaaatttagtttacgtatgtatataagaggttagtgtaaactcagtttac 8828013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 24349729 - 24349781
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| |||||||||    
T  24349729 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttac 24349781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 27449953 - 27450041
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  27449953 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 27450041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 37126307 - 37126219
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  37126307 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 37126219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 37821523 - 37821611
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  37821523 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 37821611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 46528560 - 46528648
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  46528560 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 46528648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 46529020 - 46529072
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| |||||||||    
T  46529020 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttac 46529072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 41456950 - 41456985
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtg 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  41456950 taaattcagtttacatatgtatataagtggttagtg 41456985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 502366 - 502404
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatg 146  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  502366 atgtaaattcagtttacgtatgtatataagaggttaatg 502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 2446423 - 2446509
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagttt 193  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||    
T  2446423 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagttt 2446509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 41454599 - 41454685
Alignment:
Q  110 gtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttac 195  Q
    ||||||| ||||||||||||||||  |||||||| |||||| | ||||||| ||  | ||| |||||||| ||||||||||||||||    
T  41454599 gtaaattaagtttacgtatgtatatgagaggttagtgtaaattcagtttacgtatgttcaatttaggttaatgtaaattcagtttac 41454685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 44378505 - 44378591
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagttt 193  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||    
T  44378505 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagttt 44378591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 1545847 - 1545798
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| |||||||||||||||||||| |||||||||||| || ||||||    
T  1545847 taaatttagtttacatatgtatataagaggttagtgtaaattcagtttac 1545798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 5272904 - 5272847
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||| |||||||||||  | |||| ||||||||    
T  5272904 tttagttaaagggtatattagtcattctggagtgtaacttgtttcttttagggtgtga 5272847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 8828062 - 8828013
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| ||||||||||||||| ||||||    
T  8828062 taaatttagtttacgtatgtatataagaggttagtgtaaactcagtttac 8828013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 10660316 - 10660373
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||   ||||||||||  |||||||||||||||    
T  10660316 tttagttaaagggtatattagtcattctagggtgtaacttgttttttttggggtgtga 10660373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 35512775 - 35512702
Alignment:
Q  25 tgtaaagtcggtttacgtagttgatataaattcagtttacatatgtatataagtggttagtgtaaactcggttt 98  Q
    |||||| || |||||||||||| || ||| |||||||||| ||| |||||||| | ||||||||||||| ||||    
T  35512775 tgtaaactcagtttacgtagttaatgtaagttcagtttacgtatatatataagagattagtgtaaactcagttt 35512702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 51755108 - 51755165
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||||||||||||||||  ||||||||  ||||||||||  |||||||||||||||    
T  51755108 tttagttaaagggtatattaatcattctggggtgtaacttgttttttttggggtgtga 51755165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 502294 - 502382
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||| || ||||||||| ||||||||| ||| || ||||||||  ||  | |||| ||||||| ||||||||||||||||    
T  502294 atgtaaattcagtatatgtatgtatataagaggttagtgtgaattaagtttatgtacgttcaatctaggttaatgtaaattcagtttac 502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 8828243 - 8828191
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  8828243 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 8828191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 13287893 - 13287937
Alignment:
Q  227 tatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||| |||||||||||||||||||||  |||||||||||||||    
T  13287893 tatattagtcattctgaagtgtaacttgttttttttggggtgtga 13287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 20607367 - 20607279
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||| | |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  20607367 atgtaaatttagtttacgtatgtatataagaggtcagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 20607279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 24406241 - 24406329
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||| | ||  | |||| ||||||| |||||||| |||||||    
T  24406241 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttgcttacgttcaatctaggttaatgtaaattaagtttac 24406329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 46529243 - 46529283
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  46529243 tttagttaaagggtatattagtcattctggagtgtaacttg 46529283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 51754885 - 51754937
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  51754885 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 51754937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 502121 - 502172
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagttta 159  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||    
T  502121 atgtaaattaagtttacgtatgtatataagaggttagtgtaaattcagttta 502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 9746567 - 9746614
Alignment:
Q  224 gggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||| ||||||||| |||||||||||  |||||||||||||||    
T  9746567 gggtatattagtcattctggagtgtaacttgttttttttggggtgtga 9746614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 26717200 - 26717153
Alignment:
Q  224 gggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||| ||||||||| |||||||||||  |||||||||||||||    
T  26717200 gggtatattagtcattctggagtgtaacttgttttttttggggtgtga 26717153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 41113764 - 41113680
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagttta 194  Q
    ||||||||||||||||  ||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||||||||||    
T  41113764 tgtaaattcagtttac--atgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagttta 41113680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 41454672 - 41454711
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaa 90  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  41454672 taaattcagtttacttatgtgtataagtggttagtgtaaa 41454711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 22497654 - 22497701
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  22497654 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 22497701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 23151367 - 23151425
Alignment:
Q  138 aggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||| | ||||||| ||||| |||| ||||||| ||||||||||||||||    
T  23151367 aggttaatgtaaattcagtttacttaaattcaatctaggttaatgtaaattcagtttac 23151425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 37125976 - 37125918
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattt-tttggggtgtga 271  Q
    ||||||||||||||||||| |||||| || |||||||||||  ||| ||||||||||||    
T  37125976 tttagttaaagggtatattagtcattttggagtgtaacttgtttttatttggggtgtga 37125918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 43219170 - 43219217
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  43219170 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 43219217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 44378308 - 44378366
Alignment:
Q  138 aggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||| ||||||||| ||| | |||| ||||||| ||||||||||||||||    
T  44378308 aggttaatgtaaattaagtttacttaagttcaatctaggttaatgtaaattcagtttac 44378366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 48478122 - 48478169
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  48478122 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 48478169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 53019395 - 53019442
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  53019395 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 53019442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 53019632 - 53019679
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  53019632 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 53019679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 502417 - 502482
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatc 279  Q
    |||| ||||||||| ||||||| ||| |   ||| |||||||||| ||||||||||||||||||||    
T  502417 tttaattaaagggtttattggtaattttagggtgaaacttggattatttggggtgtgagtagtatc 502482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 2446426 - 2446475
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  2446426 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 2446475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 8828240 - 8828191
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  8828240 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 8828191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 10659995 - 10660044
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  10659995 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 10660044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 23151111 - 23151160
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  23151111 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 23151160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 24349268 - 24349317
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  24349268 taaatttagtttacttatgtatataagaggttagtgtaaattcagtttac 24349317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 27449956 - 27450005
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  27449956 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 27450005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 37126304 - 37126255
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  37126304 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 37126255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 37821526 - 37821575
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  37821526 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 37821575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 44378508 - 44378557
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  44378508 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 44378557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 46528563 - 46528612
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  46528563 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 46528612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 51754888 - 51754937
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  51754888 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 51754937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 52009301 - 52009232
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtc 283  Q
    |||| |||||||||||||| || ||| ||  |||||||||||||| ||||||| |||| |||||| ||||    
T  52009301 tttaattaaagggtatattagtaattttggtgtgtaacttggattatttggggagtgaatagtatatgtc 52009232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 502124 - 502172
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggttta 99  Q
    |||||| ||||||| |||||||||||| |||||||||||| || |||||    
T  502124 taaattaagtttacgtatgtatataagaggttagtgtaaattcagttta 502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 8067918 - 8067878
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  8067918 tttagttaaagggtatattagtcattctggggtgtaacttg 8067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 12227219 - 12227172
Alignment:
Q  222 aagggtatattggtcattctgaagtgtaacttggattttttggggtgtg 270  Q
    ||||||||||| ||||||||| |||||||||| | ||||||||||||||    
T  12227219 aagggtatattagtcattctggagtgtaactt-gtttttttggggtgtg 12227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 41454600 - 41454652
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta 103  Q
    |||||| ||||||| ||||||||| || |||||||||||| || |||||||||    
T  41454600 taaattaagtttacgtatgtatatgagaggttagtgtaaattcagtttacgta 41454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 41743025 - 41742936
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttaca 196  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||  | |||| ||||||| |||||||| ||||||||    
T  41743025 atgtaaatttagtttacgtatgtatataagaggttaatgtaaattaagtttacttacgttcaatctaggttaatgtaaattaagtttaca 41742936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 16321194 - 16321127
Alignment:
Q  217 agttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtct 284  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| | |||||||||| || |||||    
T  16321194 agttaaatggtatattggtcattctggagtgtaacttggattttttagtgtgtgagtagaatttgtct 16321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 11255350 - 11255419
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtct 284  Q
    |||||||||| |||||||| ||||||||| | |||||||||  |||||||||||||||| |||||||||||    
T  11255350 tttagttaaaaggtatattagtcattctggaatgtaacttgtgttttttggggtgtgag-agtatctgtct 11255419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 25032061 - 25032118
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||  ||||||||| |||||    
T  25032061 tttagttaaagggtatattagtcattctgaggtgtaacttgttttttttgggatgtga 25032118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 6230677 - 6230765
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  6230677 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 6230765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 8836196 - 8836108
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  8836196 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttactgtaaattaagtttac 8836108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 31377597 - 31377557
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  31377597 tttagttaaagggtatattagtcattctgaagtgtaacttg 31377557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 25031889 - 25031975
Alignment:
Q  110 gtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  25031889 gtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 25031975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 28349753 - 28349798
Alignment:
Q  224 gggtatattggtcattctgaagtgtaacttggattttttggggtgt 269  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||    
T  28349753 gggtatattagtcattctgaagtgtaacttgttttttttggggtgt 28349798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 33591341 - 33591284
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||||||||||| |||| ||||||||| |||||||||||  |||||| ||||||||    
T  33591341 tttagttaaagggtgtattagtcattctggagtgtaacttgtttttttttgggtgtga 33591284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 8335784 - 8335836
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  8335784 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 8335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 8335892 - 8335944
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  8335892 atgtaaattaagtttacgtatgtatataagaggttagtgtaaattcagtttac 8335944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 8782021 - 8781933
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| ||| || | ||||||| ||  | ||| |||||||| |||||||| |||||||    
T  8782021 atgtaaattaagtttacgtatgtatataagaggttagtgtgaattcagtttacttatgttcaatttaggttaatgtaaattaagtttac 8781933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 15472335 - 15472283
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  15472335 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 15472283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 18186212 - 18186300
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| | |||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  18186212 atgtaaatttaatttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 18186300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 29296654 - 29296706
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  29296654 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 29296706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 18617871 - 18617958
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagttta 194  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | | ||||| ||  | ||| |||||||| |||||||| ||||||    
T  18617871 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcaatttacttacgttcaatttaggttaatgtaaattaagttta 18617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 41742849 - 41742786
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagta 277  Q
    |||| |||||||||||||| ||||||||  |||||||||||  |||||| |||||||| |||||    
T  41742849 tttaattaaagggtatattagtcattctagagtgtaacttgtttttttttgggtgtgactagta 41742786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 36484313 - 36484266
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  36484313 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 36484266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 6230680 - 6230729
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  6230680 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 6230729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 8335787 - 8335836
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  8335787 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 8335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 8335895 - 8335944
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  8335895 taaattaagtttacgtatgtatataagaggttagtgtaaattcagtttac 8335944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 8836193 - 8836144
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  8836193 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 8836144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 15472332 - 15472283
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  15472332 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 15472283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 25031890 - 25031939
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  25031890 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 25031939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 29296657 - 29296706
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  29296657 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 29296706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 6231001 - 6231041
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  6231001 tttagttaaagggtatattagtcattctggggtgtaacttg 6231041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 8835901 - 8835861
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| ||||||||  |||||||||||    
T  8835901 tttagttaaagggtatattagtcattctagagtgtaacttg 8835861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 10691385 - 10691329
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtg 270  Q
    ||||||||||||||||||| ||||||||||  ||||||||   ||||||||| ||||    
T  10691385 tttagttaaagggtatattagtcattctgagatgtaacttattttttttgggttgtg 10691329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 21866580 - 21866523
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||    
T  21866580 tttagttaaagggtatattagtcattctgaagtgtaacttgttttttttggggtgtga 21866523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 11979174 - 11979262
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  11979174 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttactttcaatctaggttactgtaaattcagtttac 11979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 26479153 - 26479096
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  26479153 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 26479096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 1222102 - 1222014
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  1222102 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 1222014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 2371776 - 2371724
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| |||||||||    
T  2371776 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttac 2371724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 14286924 - 14286836
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  14286924 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 14286836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 20115524 - 20115612
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  20115524 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 20115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 2357810 - 2357887
Alignment:
Q  119 gtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  2357810 gtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 2357887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 31546951 - 31546894
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  31546951 agttaatgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 31546894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 18377230 - 18377294
Alignment:
Q  222 aagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtctat 286  Q
    ||||||||||| || ||| ||  ||| |||||||||| ||||||||||||||||||||| |||||    
T  18377230 aagggtatattagtaattttggggtgcaacttggattatttggggtgtgagtagtatctctctat 18377294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 30786807 - 30786719
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| |||| |||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  30786807 atgtaaatttagtttacgtatgtatataagaagttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 30786719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 2371462 - 2371423
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaactt 253  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  2371462 tttagttaaagggtatattagtcattctggagtgtaactt 2371423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 2379912 - 2379865
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  2379912 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 2379865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 19390283 - 19390236
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  19390283 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 19390236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 1222099 - 1222050
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  1222099 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 1222050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 11979177 - 11979226
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  11979177 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 11979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 12243224 - 12243273
Alignment:
Q  222 aagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  12243224 aagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 12243273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 14286678 - 14286621
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||| |||||||||||||| |||||||||  ||||||||||  |||||| ||||||||    
T  14286678 tttaattaaagggtatattagtcattctggggtgtaacttgtttttttttgggtgtga 14286621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 14286921 - 14286872
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  14286921 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 14286872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 20115527 - 20115576
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  20115527 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 20115576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 31546660 - 31546603
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||   |||||||||  ||||||||| |||||    
T  31546660 tttagttaaagggtatattagtcattctgggatgtaacttgttttttttgggatgtga 31546603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 31546943 - 31546894
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  31546943 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 31546894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 2358094 - 2358134
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  2358094 tttagttaaagggtatattagtcattctggggtgtaacttg 2358134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 11123993 - 11123941
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| |||| |||| |||||| | |||||||    
T  11123993 atgtaaatttagtttacgtatgtatataagatgttagtgtaaattcagtttac 11123941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 14287124 - 14287072
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||  ||||||||| |||||| | |||||||    
T  14287124 atgtaaatttagtttacgtatgtatgtaagaggttactgtaaattcagtttac 14287072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 26479517 - 26479465
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| || |||||| |||||| | |||||||    
T  26479517 atgtaaatttagtttacgtatgtatataacaggttagtgtaaattcagtttac 26479465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 30786669 - 30786633
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaa 250  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  30786669 tttagttaaagggtatattagtcattctgaggtgtaa 30786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 39429296 - 39429256
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  39429296 tttaattaaagggtatattagtcattctggagtgtaacttg 39429256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 44291515 - 44291603
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| ||||||| ||||||||||||||||    
T  44291515 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttatgttcaatctaggttaatgtaaattcagtttac 44291603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 44509341 - 44509429
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| ||||||| ||||||||||||||||    
T  44509341 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttatgttcaatctaggttaatgtaaattcagtttac 44509429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 25105438 - 25105531
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattc-agtttacatat 199  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||| |||||||||||    
T  25105438 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcaagtttacatat 25105531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 44509515 - 44509572
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||| ||||||||||   ||||||||||||||    
T  44509515 tttagttaaagggtatattagtcattctgaggtgtaacttgttgtttttggggtgtga 44509572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 5543973 - 5543885
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  5543973 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 5543885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 9740934 - 9740846
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  9740934 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 9740846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 12848903 - 12848991
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||||| |||||    
T  12848903 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcactttac 12848991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 18676425 - 18676337
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  18676425 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 18676337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 31587587 - 31587499
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| || |||||||||||||    
T  31587587 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgcaaattcagtttac 31587499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 31622380 - 31622468
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  31622380 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 31622468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 35598505 - 35598441
Alignment:
Q  213 atttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagta 277  Q
    |||||||||||||||||||| ||||||||  |||||||||||  ||||||||| |||| ||||||    
T  35598505 atttagttaaagggtatattagtcattctagagtgtaacttgtgttttttgggatgtgggtagta 35598441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 40186375 - 40186323
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| |||||||||    
T  40186375 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttac 40186323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 9740610 - 9740553
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||| |||||||||||||| ||||||| ||||||||||||   |||||||||||||||    
T  9740610 tttaattaaagggtatattagtcattcggaagtgtaactttttttttttggggtgtga 9740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 18676237 - 18676180
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  18676237 agttaatgtaaattaagtttacgtatgtatataagaggttagtgtaaattcagtttac 18676180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 31587185 - 31587128
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||| |||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  31587185 tttaattaaagggtatattagtcattctggggtgtaacttgttttttttggggtgtga 31587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 31622675 - 31622731
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||| | |||||||||||||||    
T  31622675 tttagttaaagggtatattagtcattctggggtgtaactt-gtttttttggggtgtga 31622731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 38742547 - 38742490
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||  |||||| ||||||||    
T  38742547 tttagttaaagggtatattagtcattctggggtgtaacttgttttttttagggtgtga 38742490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 38742898 - 38742846
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  38742898 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 38742846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 47020138 - 47020050
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||   ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  47020138 atgtaaatttagtttacgtatgtatataagaggttagtgtaaatccagtttacttacgttcaatctaggttaatgtaaattaagtttac 47020050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 40430988 - 40430941
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  40430988 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 40430941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 42076749 - 42076796
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  42076749 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 42076796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 5543642 - 5543585
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  |||||||||   ||| |||||||||||    
T  5543642 tttagttaaagggtatattagtcattctggggtgtaacttatttttgttggggtgtga 5543585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 5543970 - 5543921
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  5543970 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 5543921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 9740931 - 9740882
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  9740931 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 9740882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 12848906 - 12848955
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  12848906 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 12848955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 18676229 - 18676180
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  18676229 taaattaagtttacgtatgtatataagaggttagtgtaaattcagtttac 18676180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 18676422 - 18676373
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  18676422 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 18676373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 25105441 - 25105490
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  25105441 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 25105490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25105622 - 25105671
Alignment:
Q  111 taaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  25105622 taaatttagtttacgtatgtatataagaggttactgtaaattcagtttac 25105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 31587584 - 31587535
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  31587584 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 31587535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 31622383 - 31622432
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  31622383 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 31622432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 38742895 - 38742846
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  38742895 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 38742846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 47019928 - 47019871
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||||||||| |||||| |||||||||  |||||||||   |||||||||||||||    
T  47019928 tttagttaaaggatatattagtcattctggggtgtaacttattttttttggggtgtga 47019871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 47455772 - 47455829
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||| |||||| ||   |||||| ||||||||    
T  47455772 tttagttaaagggtatattagtcattctgaggtgtaatttttttttttttgggtgtga 47455829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 25105619 - 25105671
Alignment:
Q  48 atataaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||| ||||||| |||||||||||| ||||| |||||| || ||||||    
T  25105619 atataaatttagtttacgtatgtatataagaggttactgtaaattcagtttac 25105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 35598766 - 35598714
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttacgta 103  Q
    |||||| |||| ||||||||||||||| ||||||||| || || |||||||||    
T  35598766 taaattaagttaacatatgtatataagaggttagtgtgaattcagtttacgta 35598714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 40186044 - 40186004
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| || |||||| |||||||||||    
T  40186044 tttagttaaagggtatattagttattctggagtgtaacttg 40186004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 17925060 - 17924993
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctg 281  Q
    ||||||||||||||||||| |||| ||||  |||||||||| |||||||||||||||||||| |||||    
T  17925060 tttagttaaagggtatattagtcaatctggggtgtaacttgtattttttggggtgtgagtagcatctg 17924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 3770930 - 3771018
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  3770930 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 3771018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 28226007 - 28225919
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| ||||||| |||||||||||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  28226007 atgtaaatttagtttacttatgtatacaagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 28225919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 11335390 - 11335338
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||||||||||||| |||||| | |||||||    
T  11335390 atgtaaatttagtttacgtatgtatacaagaggttagtgtaaattcagtttac 11335338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 11493410 - 11493358
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||||||||||||| |||||| | |||||||    
T  11493410 atgtaaatttagtttacgtatgtatacaagaggttagtgtaaattcagtttac 11493358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 15475644 - 15475556
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  15475644 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 15475556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 24179895 - 24179807
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  24179895 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 24179807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 30361617 - 30361705
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  30361617 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 30361705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 37093498 - 37093410
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  37093498 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 37093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 18605358 - 18605393
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtg 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  18605358 taaattcagtttacatatgtatataagtggttagtg 18605393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 28068490 - 28068441
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| |||||||||||||||||||| |||||||||||| || ||||||    
T  28068490 taaatttagtttacatatgtatataagaggttagtgtaaattcagtttac 28068441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 49740626 - 49740683
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||| ||||  ||||||||||  |||||||||||||||    
T  49740626 tttagttaaagggtatattagtcagtctggggtgtaacttgtgttttttggggtgtga 49740683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 50501439 - 50501496
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||  ||||||||||   ||||||||||||||    
T  50501439 tttagttaaagggtatattagtcattctggggtgtaacttgttatttttggggtgtga 50501496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 3047224 - 3047276
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  3047224 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 3047276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 8896266 - 8896306
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  8896266 tttagttaaagggtatattagtcattctgaggtgtaacttg 8896306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 15907701 - 15907753
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  15907701 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 15907753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 15910429 - 15910469
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  15910429 tttagttaaagggtatattagtcattctggagtgtaacttg 15910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 28068355 - 28068315
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttg 254  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  28068355 tttaattaaagggtatattagtcattctgaagtgtaacttg 28068315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 44054481 - 44054429
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  44054481 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 44054429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 46234016 - 46233964
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||    
T  46234016 atgtaaatttagtttacgtatgtatataagaggttattgtaaattcagtttac 46233964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 3416932 - 3416979
Alignment:
Q  224 gggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||| ||||||||| |||||||||||  |||||||||||||||    
T  3416932 gggtatattagtcattctggagtgtaacttgttttttttggggtgtga 3416979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 17137563 - 17137630
Alignment:
Q  219 ttaaagggtatattggtcattctgaagtgtaacttggattttttggggtg-tgagtagtatctgtcta 285  Q
    ||||||||||||||| ||||| ||  |||||| ||||||||||||||  | |||||||||||||||||    
T  17137563 ttaaagggtatattgttcattatggggtgtaaattggattttttgggaagttgagtagtatctgtcta 17137630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 18605284 - 18605323
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaa 90  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  18605284 taaattcagtgtacttatgtatataagtggttagtgtaaa 18605323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 52469168 - 52469117
Alignment:
Q  109 tgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    ||||||||||||||||||||||||| ||||||| | |||||| | |||||||    
T  52469168 tgtaaattcagtttacgtatgtatataagaggtcagtgtaaattcagtttac 52469117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 13556486 - 13556533
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  13556486 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 13556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 17580552 - 17580506
Alignment:
Q  225 ggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||||| ||||||||| |||||||||||  |||||||||||||||    
T  17580552 ggtatattagtcattctggagtgtaacttgttttttttggggtgtga 17580506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 18605501 - 18605587
Alignment:
Q  110 gtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||| ||||||||||||| || ||||||||| ||| || | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  18605501 gtaaattaagtttacgtatgtttataagaggttagtgtgaatttagtttacttatgttcaatctaggttaatgtaaattcagtttac 18605587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 18605961 - 18606031
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtct 284  Q
    ||||||| ||||||||||| |||||| ||  ||| ||||||  ||||||| |||||||||||||| |||||    
T  18605961 tttagttcaagggtatattagtcattatggggtgcaacttgtgttttttgcggtgtgagtagtatgtgtct 18606031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 24180272 - 24180225
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  24180272 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 24180225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 40360080 - 40360127
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  40360080 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 40360127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 45501927 - 45501869
Alignment:
Q  138 aggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||||||| ||||||||| ||  | |||| ||||||||||||||||||||||||    
T  45501927 aggttaatgtaaattaagtttacttatgttcaatctaggttattgtaaattcagtttac 45501869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 46675158 - 46675205
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  46675158 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 46675205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 47534414 - 47534461
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  47534414 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 47534461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 3047227 - 3047276
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  3047227 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 3047276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 3770933 - 3770982
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  3770933 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 3770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 3994465 - 3994408
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||| |||||||||||||| |||||||||  ||| ||||||  |||||||||||||||    
T  3994465 tttaattaaagggtatattagtcattctggggtgcaacttgttttttttggggtgtga 3994408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 13556483 - 13556533
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttac 160  Q
    |||||||||||||||||  ||||||| ||||||||| |||||||| |||||||    
T  13556483 atgtaaattcagtttac--atgtatataagaggttagtgtaaactcagtttac 13556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 15475641 - 15475592
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  15475641 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 15475592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 15907704 - 15907753
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  15907704 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 15907753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 18605211 - 18605260
Alignment:
Q  110 gtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagttta 159  Q
    ||||||||||||||||||||||||  |||||||| |||||| | ||||||    
T  18605211 gtaaattcagtttacgtatgtatatgagaggttagtgtaaattcagttta 18605260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 24179892 - 24179843
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  24179892 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 24179843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 30361620 - 30361669
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  30361620 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 30361669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 37093495 - 37093446
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  37093495 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 37093446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 44054478 - 44054429
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  44054478 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 44054429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 46233681 - 46233625
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    |||||||||| |||||||| |||||||||  ||||||||||  |||||||||||||||    
T  46233681 tttagttaaaaggtatattagtcattctgg-gtgtaacttgttttttttggggtgtga 46233625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 49457544 - 49457601
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| |||||||||   || ||||||  |||||||||||||||    
T  49457544 tttagttaaagggtatattagtcattctgggatgcaacttgttttttttggggtgtga 49457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 52469166 - 52469117
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||||||||||| |||||||||||| ||| |||||||| || ||||||    
T  52469166 taaattcagtttacgtatgtatataagaggtcagtgtaaattcagtttac 52469117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 17925908 - 17925816
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaatt-aggttattgtaaattcagtttacatat 199  Q
    ||||||||| ||||||||| |||||| || |||||| ||| || | ||||||| ||  | ||||| |||||| |||||||| |||||||||||    
T  17925908 atgtaaattaagtttacgtgtgtatataaaaggttagtgtcaatttagtttacttatgttcaatttaggttaatgtaaattaagtttacatat 17925816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 18605212 - 18605260
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggttta 99  Q
    |||||||||||||| ||||||||| || |||||||||||| || |||||    
T  18605212 taaattcagtttacgtatgtatatgagaggttagtgtaaattcagttta 18605260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 29033325 - 29033241
Alignment:
Q  112 aaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttac 195  Q
    ||||| |||||||||||||||| ||||||||| |||||| | ||||| | ||  || || |||||||| |||||||| |||||||    
T  29033325 aaatttagtttacgtatgtatataagaggttagtgtaaattcagttttcttatttaaaatttaggttaatgtaaattaagtttac 29033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 37093836 - 37093748
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||| | |||||| | | ||||| ||  | |||| ||||||| |||||||| |||||||    
T  37093836 atgtaaatttagtttacgtatgtatataagaggtcagtgtaaattcaatttacttacgttcaatctaggttaatgtaaattaagtttac 37093748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 105191 - 105103
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| ||||||||||||||||    
T  105191 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattcagtttac 105103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 105370 - 105283
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagttta 194  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||||||| ||  | |||| ||||||| |||||||| ||||||    
T  105370 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattaagtttacttacgttcaatctaggttaatgtaaattaagttta 105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 105188 - 105139
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  105188 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 105139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 8403 - 8336
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctg 281  Q
    ||||||||||||||||||| |||| ||||  ||||||||||  ||||||||||||||||||| |||||    
T  8403 tttagttaaagggtatattagtcagtctggggtgtaacttgtgttttttggggtgtgagtagcatctg 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 415 - 358
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||| ||||||| |||  |||||||||||||||    
T  415 tttagttaaagggtatattagtcattctggagtgtaatttgttttttttggggtgtga 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 706 - 613
Alignment:
Q  103 agttcatgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  706 agtttatgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 698 - 649
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  698 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 6109 - 6021
Alignment:
Q  108 atgtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaat-taggttattgtaaattcagtttac 195  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| | ||||||| ||  | |||| ||||||| |||||||| |||||||    
T  6109 atgtaaatttagtttacgtatgtatataagaggttagtgtaaattcagtttacttacgttcaatctaggttaatgtaaattaagtttac 6021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 6106 - 6057
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    |||||| ||||||| |||||||||||| |||||||||||| || ||||||    
T  6106 taaatttagtttacgtatgtatataagaggttagtgtaaattcagtttac 6057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 12218 - 12287
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtgagtagtatctgtct 284  Q
    ||||||||||||||||||| |||||||||  ||||||||| |  ||||||| ||||||||||||| |||||    
T  12218 tttagttaaagggtatattagtcattctggggtgtaactt-gtgtttttggagtgtgagtagtatgtgtct 12287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 11464 - 11555
Alignment:
Q  110 gtaaattcagtttacgtatgtatacaagaggttaatgtaaactaagtttacataaatacaa-ttaggttattgtaaattcagtttacatata 200  Q
    ||||||| ||||||||||||||||  ||| |||| |||||| | ||||||| ||  | ||| |||||||| |||||||||||||||| ||||    
T  11464 gtaaattaagtttacgtatgtatatgagaagttagtgtaaattcagtttacgtatgttcaatttaggttaatgtaaattcagtttacttata 11555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 11537 - 11576
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaa 90  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  11537 taaattcagtttacttatatatataagtggttagtgtaaa 11576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 11611 - 11643
Alignment:
Q  51 taaattcagtttacatatgtatataagtggtta 83  Q
    |||||||| ||||||||||||||||||||||||    
T  11611 taaattcaatttacatatgtatataagtggtta 11643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 42086 - 42029
Alignment:
Q  214 tttagttaaagggtatattggtcattctgaagtgtaacttggattttttggggtgtga 271  Q
    ||||||||||||||||||| ||||||||   |||||||||  ||||||||||||||||    
T  42086 tttagttaaagggtatattagtcattcttgggtgtaacttatattttttggggtgtga 42029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 26987 - 26940
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  26987 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 26940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 27260 - 27213
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  27260 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 27213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 27533 - 27486
Alignment:
Q  51 taaattcagtttacatatgtatataagtggttagtgtaaactcggtttac 100  Q
    ||||||||||||||||  ||||||||| ||||||||||||||| ||||||    
T  27533 taaattcagtttacat--gtatataagaggttagtgtaaactcagtttac 27486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University