View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14965_low_7 (Length: 431)

Name: NF14965_low_7
Description: NF14965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14965_low_7
NF14965_low_7
[»] chr7 (1 HSPs)
chr7 (343-418)||(10210039-10210114)


Alignment Details
Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 418
Target Start/End: Original strand, 10210039 - 10210114
Alignment:
343 atgttggtaaaggagcacgtgctgctcgattacagagaaataaaatggtattgttatatctttatatgttccttgt 418  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
10210039 atgttggtaaaggtgcacgtgctgctcgattacagagaaataaaatggtactgttatatctttatatgttccttgt 10210114  T

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