View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14967_high_13 (Length: 274)
Name: NF14967_high_13
Description: NF14967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14967_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 44796571 - 44796324
Alignment:
| Q |
18 |
aaaagtgtttcatgtctctagtttgcaacttgcagacagtgacaagaaatttat----gccacacacatttctccaacgaggcctacattggcctccaca |
113 |
Q |
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| T |
44796571 |
aaaagtgtttcatgtctctagtttgcaacttgcagacagtgacaagaaatttatttatgccacacacatttctccaacgaggcctacattggcctccaca |
44796472 |
T |
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| Q |
114 |
gatttcaggaacaaatcattagtcaacttcatattacatcacacacaatagataaagaccgcaaataattaaatcctgctaaaaattgtaaattttagtt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
44796471 |
gatttcaggaacaaatcattagtcaacttcatattacatcacacacaatagataaagactgcaaataattaaatcctgctaaaaattgtaaattttagtt |
44796372 |
T |
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| Q |
214 |
tcgaagatatttatgaataccccaatttccattatctactgaaaattc |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44796371 |
tcgaagatatttatgaataccccaatttccattatctactgaaaattc |
44796324 |
T |
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