View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14967_low_16 (Length: 292)
Name: NF14967_low_16
Description: NF14967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14967_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 40751746 - 40751480
Alignment:
| Q |
18 |
tataaaggctcggatagatcatttctctacagaatctgtccgaatcaagcattctcatcacttccaaattacaagagggttgctccaaatgcttttggtt |
117 |
Q |
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| T |
40751746 |
tataaaggctcggatagatcatttctctacagaatctgtccaaatcaagcattctcatcacttccaaattacaagagggttgctccaaatgcttttggtt |
40751647 |
T |
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| Q |
118 |
ttttaaattcttctgatgatggaaggataaagaaggatttggtgagtagtttatgtgataactcatcaacattaatcacaaacttaaagtcttccatgga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
40751646 |
ttttaaattcttctgatgatggaaggataaagaaggatttggtgagtagtttatgtgataactcatctacattaatcacaaacttaaagtcttccatgga |
40751547 |
T |
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| Q |
218 |
gaaagagcaagatcgcgatgaggtcgaaattgagcatcacaaagaagttccattcattgatattctt |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
40751546 |
gaaagagcaagatcgcgatgaggtcgaaattgagcatcacaaagaagttccattcattgattttctt |
40751480 |
T |
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