View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14968_low_1 (Length: 348)
Name: NF14968_low_1
Description: NF14968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14968_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 2428283 - 2428546
Alignment:
| Q |
12 |
acagaggaaacaaaaaacagagcaaggtcatgcaaaacatgatttgtagtttgaaaaaattaatgttaaaaatataaaagaataagactttgcaacaaga |
111 |
Q |
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| T |
2428283 |
acagaggaaacaaaaaacagagcaaggtcatgcaaaacatgatttgtagtttgaaaaaattaatgttaaaaatataaaagaatgagactttgcaacaaga |
2428382 |
T |
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| Q |
112 |
tagacaaagatatacgtacaaactcacctttatgttgtttgtactttgtttcacatggtgaaatctgattcagcagaagttgaagtgttacctaactgga |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2428383 |
tagacaaagatatacgtacaaactcacctttatgttgtttgtactttgtttcacatggtgaaatctgattcagcagaagttgaagtgttacctaattgga |
2428482 |
T |
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| Q |
212 |
gaaattcaatgagaaaaatatatat-aaaattgtgtgagaagaagaaaagaacatgtcagcgac |
274 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
2428483 |
gaaattcaatgagaaaaatatatataaaaattgtgtgagaagaagaaaagaacatgtcagcgac |
2428546 |
T |
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