View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14969_high_24 (Length: 321)
Name: NF14969_high_24
Description: NF14969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14969_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 6 - 311
Target Start/End: Original strand, 7569070 - 7569375
Alignment:
| Q |
6 |
atgctggtgcttggaataagcattggagttatctgtaatgtgatgtttgctgattgggtgggcacagatttgctcatcatattatttataggtaatatta |
105 |
Q |
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| T |
7569070 |
atgctgatgcttggaataagtattggagttatctgtaatgtcatgtttgctgattggatggtcacagttttgctcatcatcttatttataggtaatatta |
7569169 |
T |
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| Q |
106 |
atgttgagatcccacgccgactagtgatatcgccaaattagtggttacaacttgcaagtgttgacagttgtgagcacctttaattctaaaagnnnnnnnt |
205 |
Q |
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| T |
7569170 |
atgttgagatcccacgccgactagtgatatcgccaaattagtggttacaacttacaagtgttgacggttgtgagcacctttaattctaaaagaaaaaaat |
7569269 |
T |
|
| Q |
206 |
tatcgaaaatggattgcgtgctgttaaaatttcatgaagttttattttcagtcgtatgttcaagatcaaatacttacgaatttaagttgtattgtaaatc |
305 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7569270 |
tatcgaaaatggattgtgtgctgttaaaatttcatgaagttttattttcggtcgtatgttcaagatcaaatacttacgaatttaagttgtattgtaaatc |
7569369 |
T |
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| Q |
306 |
agattt |
311 |
Q |
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|||||| |
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| T |
7569370 |
agattt |
7569375 |
T |
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