View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14969_high_29 (Length: 290)
Name: NF14969_high_29
Description: NF14969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14969_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 6497964 - 6498228
Alignment:
| Q |
18 |
gattgatctatgaataatcttcatactttgtaacatgttttcagataagttatatggtcaccaacatcttatatccagaatggaatatttggagtcagtt |
117 |
Q |
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| T |
6497964 |
gattgatctatgaataatcttcatactttgtaacatgttttcagataagttatatggtcaccaacatcttatatccagaatggaatatttggagtcagtt |
6498063 |
T |
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| Q |
118 |
tcttctagaaactgctagtggtttacgaatggacgcattggaaaaatcacatccaattgaggcaagaaagttacagtatttctgactgtaaacaaataat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6498064 |
tcttctagaaactgctagtggtttacgaatggacgcattggaaaaatcacatccaattgaggcaagaaagttacagtatttctgactgtaaacaaataat |
6498163 |
T |
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| Q |
218 |
gatgttccacttctttcatttatctttttctaatgcgacagttattgtggacggagggagtattat |
283 |
Q |
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| T |
6498164 |
gatgttccacttctttcatttatctttttctaatgcgacagttatt-tggacggagggagtattat |
6498228 |
T |
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