View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14969_low_2 (Length: 640)

Name: NF14969_low_2
Description: NF14969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14969_low_2
NF14969_low_2
[»] chr7 (9 HSPs)
chr7 (16-408)||(23416990-23417388)
chr7 (236-408)||(36657597-36657780)
chr7 (185-330)||(19625457-19625602)
chr7 (185-413)||(12633371-12633612)
chr7 (185-358)||(35759750-35759918)
chr7 (222-377)||(261730-261889)
chr7 (235-358)||(29428916-29429044)
chr7 (235-356)||(5925125-5925251)
chr7 (380-408)||(24841269-24841297)
[»] scaffold0110 (1 HSPs)
scaffold0110 (16-410)||(38352-38742)
[»] chr1 (22 HSPs)
chr1 (17-408)||(42365838-42366223)
chr1 (16-410)||(50677927-50678319)
chr1 (222-410)||(34969734-34969922)
chr1 (222-410)||(42934171-42934367)
chr1 (198-408)||(15581518-15581738)
chr1 (222-381)||(41404052-41404216)
chr1 (226-407)||(7741058-7741250)
chr1 (222-413)||(39793534-39793725)
chr1 (282-410)||(49764852-49764985)
chr1 (222-330)||(48046438-48046546)
chr1 (292-381)||(16302758-16302852)
chr1 (236-312)||(42117145-42117221)
chr1 (236-312)||(49741373-49741449)
chr1 (233-366)||(50139554-50139692)
chr1 (235-408)||(50108993-50109173)
chr1 (185-253)||(16302624-16302692)
chr1 (228-355)||(19551166-19551297)
chr1 (235-312)||(30190811-30190888)
chr1 (231-312)||(31991631-31991711)
chr1 (372-409)||(48046403-48046440)
chr1 (368-410)||(35306901-35306943)
chr1 (318-351)||(12441135-12441168)
[»] chr2 (10 HSPs)
chr2 (16-405)||(44246301-44246674)
chr2 (222-381)||(28219002-28219167)
chr2 (222-408)||(10354207-10354403)
chr2 (232-407)||(1499213-1499394)
chr2 (185-355)||(28199158-28199333)
chr2 (222-413)||(17999929-18000123)
chr2 (282-414)||(7444718-7444865)
chr2 (235-330)||(20717593-20717688)
chr2 (372-410)||(6476766-6476804)
chr2 (374-410)||(14329055-14329091)
[»] chr3 (18 HSPs)
chr3 (16-411)||(27011130-27011529)
chr3 (222-381)||(42029265-42029430)
chr3 (222-408)||(39439841-39440042)
chr3 (185-355)||(25045382-25045557)
chr3 (200-323)||(32278405-32278528)
chr3 (226-356)||(24374193-24374318)
chr3 (202-297)||(40024811-40024906)
chr3 (185-381)||(29765165-29765363)
chr3 (200-404)||(44713184-44713394)
chr3 (239-347)||(2230101-2230209)
chr3 (206-355)||(25909352-25909507)
chr3 (236-412)||(14567797-14567978)
chr3 (185-352)||(42957221-42957387)
chr3 (361-408)||(25045314-25045361)
chr3 (235-330)||(49368372-49368467)
chr3 (240-351)||(23466708-23466826)
chr3 (368-408)||(35231957-35231997)
chr3 (292-355)||(40026083-40026151)
[»] chr8 (15 HSPs)
chr8 (424-594)||(34091352-34091522)
chr8 (220-408)||(38679688-38679890)
chr8 (159-351)||(28873629-28873829)
chr8 (282-408)||(42025391-42025527)
chr8 (229-406)||(34924729-34924922)
chr8 (233-383)||(29844220-29844375)
chr8 (229-408)||(14112325-14112521)
chr8 (591-632)||(34091678-34091719)
chr8 (235-330)||(22531293-22531388)
chr8 (235-330)||(22535978-22536073)
chr8 (235-330)||(25993899-25993994)
chr8 (282-351)||(30800196-30800270)
chr8 (236-312)||(11354826-11354902)
chr8 (467-564)||(34091498-34091595)
chr8 (222-330)||(5358211-5358319)
[»] scaffold0224 (1 HSPs)
scaffold0224 (222-410)||(12404-12600)
[»] scaffold0127 (1 HSPs)
scaffold0127 (222-381)||(30119-30283)
[»] chr5 (11 HSPs)
chr5 (185-412)||(30084853-30085085)
chr5 (222-378)||(4943514-4943676)
chr5 (226-410)||(9159392-9159580)
chr5 (222-408)||(11617181-11617382)
chr5 (222-355)||(5247874-5248005)
chr5 (255-381)||(7505998-7506129)
chr5 (222-335)||(29293198-29293310)
chr5 (236-312)||(32233061-32233137)
chr5 (235-330)||(13191724-13191819)
chr5 (222-381)||(31933476-31933624)
chr5 (368-411)||(16597819-16597862)
[»] chr4 (16 HSPs)
chr4 (222-408)||(46944003-46944194)
chr4 (222-381)||(21263563-21263728)
chr4 (222-410)||(35291995-35292193)
chr4 (222-381)||(50859151-50859315)
chr4 (222-378)||(22405023-22405185)
chr4 (229-413)||(41223649-41223844)
chr4 (222-410)||(35033798-35034001)
chr4 (288-406)||(3121182-3121310)
chr4 (222-410)||(48084627-48084830)
chr4 (222-381)||(41809873-41810042)
chr4 (224-406)||(31227657-31227843)
chr4 (236-312)||(26861354-26861430)
chr4 (286-355)||(4292685-4292759)
chr4 (293-355)||(4342085-4342147)
chr4 (230-304)||(55841423-55841497)
chr4 (236-304)||(55777243-55777311)
[»] scaffold0022 (2 HSPs)
scaffold0022 (222-408)||(44100-44301)
scaffold0022 (222-408)||(77821-78022)
[»] scaffold0039 (1 HSPs)
scaffold0039 (229-410)||(56861-57057)
[»] scaffold0227 (1 HSPs)
scaffold0227 (271-381)||(221-336)
[»] chr6 (3 HSPs)
chr6 (230-312)||(10871282-10871364)
chr6 (235-330)||(33091176-33091271)
chr6 (231-312)||(19694550-19694631)
[»] scaffold0097 (1 HSPs)
scaffold0097 (235-330)||(21430-21525)
[»] scaffold0011 (1 HSPs)
scaffold0011 (236-381)||(9216-9365)


Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 16 - 408
Target Start/End: Original strand, 23416990 - 23417388
Alignment:
Q  16 gtcacaactaggaacattaaataattactatgccatggaaggcgtgagactttctggaagaaaaaa-ctggagataagtgacctaaaatactaattagag 114  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  23416990 gtcacaacgaggaacattaaataactactatgccatagaaggcgtgaggctttctggaagaaaaaaactggacataagtgacctaaaatactaattagag 23417089  T
Q  115 agagagttgtaggagagagaaacagnnnnnnnnnnn--tcaagttgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattg 212  Q
    ||||  |||||||||||||||||||             | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23417090 agag--ttgtaggagagagaaacaggaagaaaaaaaatttaagttgcacacacgcaagaaaaaagaagaaggtgaaatagaaaatgcagggataaaattg 23417187  T
Q  213 taataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23417188 taataaaattattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 23417287  T
Q  313 cacact-----ccattccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcc 407  Q
    || |||     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23417288 catactccatgccattccattccttttttacaaaaccaaacaatggaacatggttccatcccactccattccatcactctccatcaatccaaacatagcc 23417387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 36657597 - 36657780
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc----- 330  Q
    |||||||||||||||||||||||||| |||| ||||||  |||   ||||| ||||||||||||||||||||||||||||||| | || ||||||         
T  36657597 attccattggatacaccccaaattgggtggattgaaaatctggttaaatgaatggtattggatggaatgggttccatcacacttcttttcattccatttt 36657696  T
Q  331 -ttttttacaaaaccaaacaatggaacatggtttcatcccac-----tccattccatcactctccatcaatccaaacatagcct 408  Q
     |||||||||||||||||||||||||||||||| ||||||||     ||||||||||||||||||||||||||||| |||||||    
T  36657697 tttttttacaaaaccaaacaatggaacatggttccatcccaccccattccattccatcactctccatcaatccaaatatagcct 36657780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 185 - 330
Target Start/End: Complemental strand, 19625602 - 19625457
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    |||||||||||  | |||||||||| ||||||     |||||||||||||||| |||||||||||||| ||| ||||  |||||| ||||||||| ||||    
T  19625602 tgaaatagaaatagtagggataaaaatgtaattcggttattaatgtgttccatcccattggatacaccacaatttgggaggaatggaaaattggatgaat 19625503  T
Q  285 gagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||    
T  19625502 gagtggtattggatggaattagttccatcacattccattccattcc 19625457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 185 - 413
Target Start/End: Complemental strand, 12633612 - 12633371
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    ||||||||||||   ||||  |||||||||||   | ||||||||| || ||||||||||||||||||| || ||||  |||||| ||||||||   |||    
T  12633612 tgaaatagaaaaaatagggtcaaaattgtaattgtattattaatgtatttcattccattggatacaccctaatttgggaggaatggaaaattggctaaat 12633513  T
Q  285 gagtggtattg---gatggaatgggttccatcacactccattccattcc----------ttttttacaaaaccaaacaatggaacatggtttcatcccac 371  Q
    |||||||||||   ||||||||| |||||||||||||||| ||||||||          || ||||||||||||||||||||||  |||    |||||||    
T  12633512 gagtggtattggtcgatggaatgagttccatcacactccactccattccattccattatttgtttacaaaaccaaacaatggaatgtggccctatcccac 12633413  T
Q  372 tccattccatcactctccatcaatccaaacatagccttagtt 413  Q
     |||||||||||||||||| ||||||||||||||||| ||||    
T  12633412 accattccatcactctccaccaatccaaacatagcctaagtt 12633371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 185 - 358
Target Start/End: Complemental strand, 35759918 - 35759750
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    |||||||||||| |  ||||||||||||||||  || ||||||||||||||||||||||| ||||||||||  ||||  || || |||||||| | ||||    
T  35759918 tgaaatagaaaaagttgggataaaattgtaattgaattattaatgtgttccattccattgcatacaccccagtttgggagggattaaaaattgaatgaat 35759819  T
Q  285 gagtggtattggatggaatgggttccatcacactccattccattccttttttacaaaaccaaacaatggaacat 358  Q
    |||||||||||||||||||| | |||||     || |||||||   |||||| |||||||||||||||||||||    
T  35759818 gagtggtattggatggaatgaggtccat-----tctattccatcaattttttgcaaaaccaaacaatggaacat 35759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 222 - 377
Target Start/End: Original strand, 261730 - 261889
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||||||||||| |||||||||||||||||||||   |||||| |||||||    ||||||| ||||| |||||||||| ||||||||||  |||    
T  261730 tattaatgtgttccatttcattggatacaccccaaattgaggggaatggaaaattgagtaaatgagttgtatttgatggaatggattccatcacatccca 261829  T
Q  322 ttccattcc----ttttttacaaaaccaaacaatggaacatggtttcatcccactccatt 377  Q
    |||||||||    |||||||||||| |||||||||||| || | |  |||||||||||||    
T  261830 ttccattccatctttttttacaaaatcaaacaatggaatatagctctatcccactccatt 261889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 358
Target Start/End: Complemental strand, 29429044 - 29428916
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc---- 330  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||||||  ||||| ||| ||||||||||| ||||||||   | |||||||||||        
T  29429044 cattccattgcatacaccccaaattggagggaatgataaattggaagagagagtgctatgggatggaatggattccatcatgtttcattccattccattc 29428945  T
Q  331 -ttttttacaaaaccaaacaatggaacat 358  Q
     ||||||||||| ||||||||||||||||    
T  29428944 attttttacaaatccaaacaatggaacat 29428916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 356
Target Start/End: Original strand, 5925125 - 5925251
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc---- 330  Q
    |||||||||| ||||| ||||| ||||  |||||||||||   |  |||||| || ||||||||||||||| |||||||| | || ||||||| ||        
T  5925125 cattccattgcatacatcccaatttgggaggaatgaaaaagctggtgaatgaatgatattggatggaatggattccatcatattctattccataccatat 5925224  T
Q  331 -ttttttacaaaaccaaacaatggaac 356  Q
      |||||||||||||||||||||||||    
T  5925225 actttttacaaaaccaaacaatggaac 5925251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 380 - 408
Target Start/End: Original strand, 24841269 - 24841297
Alignment:
Q  380 atcactctccatcaatccaaacatagcct 408  Q
    |||||||||||||||||||||||||||||    
T  24841269 atcactctccatcaatccaaacatagcct 24841297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 16 - 410
Target Start/End: Original strand, 38352 - 38742
Alignment:
Q  16 gtcacaactaggaacattaaataattactatgccatggaaggcgtgagactttctggaagaaaaaact--ggagataagtgacctaaaatactaattaga 113  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |  ||| |||||||||||||||||| |||||||    
T  38352 gtcacaacgaggaacattaaataactactatgccatggaaggcgttaggctttctggaagaaaaaaatttggatataagtgacctaaaataccaattaga 38451  T
Q  114 gagagagttgtaggagagagaaacagnnnnnnnnnnntcaagttgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattgt 213  Q
    |||||  |||||||||||||||||||           |||||||| ||||||||||||   |||||||||||||||||||||||| ||||||||||||||    
T  38452 gagag--ttgtaggagagagaaacaggaaaaaaaaa-tcaagttgaacacacgcaaga---aagaagaaggtgaaatagaaaatgtagggataaaattgt 38545  T
Q  214 aataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatc 313  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38546 aataaaattattaatgtgttccattccattggatacatcccaaattgaatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatc 38645  T
Q  314 acactccattccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcctta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38646 acactccattccattccttttttacaaaaccaaacaatggaacatggttccatcccactccattccatcactctccatcaatcaaaacatagcctta 38742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 408
Target Start/End: Complemental strand, 42366223 - 42365838
Alignment:
Q  17 tcacaactaggaacattaaataattactatgccatggaaggcgtgagactttctggaagaaaaaactggagataagtgacctaaaatactaattagagag 116  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42366223 tcacaacgaggaacattaaataactactatgtcatggaaggcgtgaggctttctggaagaaaaaactggagataagtgacctaaaatactaattagagag 42366124  T
Q  117 agagttgtaggagagagaaacagnnnnnnnnnnntcaagttgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattgtaat 216  Q
    ||||    |||| ||| ||| |            ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  42366123 agagaaacagga-agaaaaaaa----------attcaagttgcacacacacaagaagaaagagga-ggtgaaatagaaaatgcagggataaaattgtaat 42366036  T
Q  217 aaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcaca 316  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42366035 aaaattattaatgtgttccattccattggatacaccccaaattagatggaatgaaaaattggaagaatgaatggtattggatggaatgggttccatcaca 42365936  T
Q  317 ctccattccattcc-----ttttttacaaaacc-aaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcct 408  Q
    ||||||||||||||     ||||||| |||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  42365935 ctccattccattccattcattttttataaaaccaaaacaatggaacatggttccattccattccattccatcactctccatcaatccaaacatagcct 42365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 16 - 410
Target Start/End: Original strand, 50677927 - 50678319
Alignment:
Q  16 gtcacaactaggaacattaaataattactatgccatggaaggcgtgagactttctggaagaaaaaactggagataagtgacctaaaatactaattagaga 115  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50677927 gtcacaacgaggaacattaaataactactatgccatggaaggcgtgaggctttctggaagaaaaaactggagataagtgacctaaaatactaattagaga 50678026  T
Q  116 gagagttgtaggagagagaaacagnnnnnnnnnnntcaagttgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattgtaa 215  Q
    ||||||||||||||||| ||||||           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50678027 gagagttgtaggagagaaaaacaggaaaaaaaaattcaaattgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattgtaa 50678126  T
Q  216 taaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcac 315  Q
    ||||| |||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||||| ||||||||||||||||    
T  50678127 taaaattattaatgtgttccattccattggatacacccc-----------------aaattggaagaatgagtggtattggatagaatgggttccatcac 50678209  T
Q  316 ac-----tccattccattccttttttacaaaaccaaacaatggaacatggtttcatcccac----------tccattccatcactctccatcaatccaaa 400  Q
    ||     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||    
T  50678210 actccattccattccattccttttttacaaaaccaaacaatggaacatggttccatcccactcaatttcattccattccatcactctccatcaatccaaa 50678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 222 - 410
Target Start/End: Complemental strand, 34969922 - 34969734
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||| ||| |||||||| |||||||||||||||||| |||||||||| |||    ||||||||||||||||||||||||||||||||||||| ||    
T  34969922 tattaatgtattctattccatttgatacaccccaaattgga-ggaatgaaaatttgacttaatgagtggtattggatggaatgggttccatcacacttca 34969824  T
Q  322 ttccattccttttttacaaaaccaaacaatgg-aacatggtttcatcccactccattccatcactctccatcaatccaaacatagcctta 410  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34969823 ttccattcattttttacaaaatcaaacaatggaaacatggtttcatcccactccattccatcactctccatcaatccaaacatagtctta 34969734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 222 - 410
Target Start/End: Complemental strand, 42934367 - 42934171
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  42934367 tattgatgtgttccattctattggatacacctcaaattggatggaatggaaaattgaaggaatgagtggtattggatggaatgggttccatcacactcca 42934268  T
Q  322 ttccattcc--------ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcctta 410  Q
    |||||||||        |||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  42934267 ttccattccattattttttttttacaaaaccaaacaatggaatgtggtcccatcccactccattccatcactctccaccaatccaaacatagcctta 42934171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 198 - 408
Target Start/End: Complemental strand, 15581738 - 15581518
Alignment:
Q  198 gcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattgga 297  Q
    ||||||| ||||| ||||| | |  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||  ||||||||||    
T  15581738 gcagggacaaaatagtaattataagattattgtgttccattccattggatacaccccaaattggggggaatggaaaattgggagaatggatggtattgga 15581639  T
Q  298 tggaatgggttccatcacactccattccattc-----cttttttacaaaaccaaacaatggaacatggtttcatcccac-----tccattccatcactct 387  Q
    ||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||  ||| |  |||||||     ||||||||||||||||    
T  15581638 tggaatgggttccatcacactccattccattccatttcttttttacaaaaccaaacaatggaatgtggatatatcccactccattccattccatcactct 15581539  T
Q  388 ccatcaatccaaacatagcct 408  Q
    |||||||||||||||||||||    
T  15581538 ccatcaatccaaacatagcct 15581518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 222 - 381
Target Start/End: Complemental strand, 41404216 - 41404052
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||| |||||||||||||  ||||||||||||||||||||| ||||    
T  41404216 tattaatgtgttccatttcattggatacaccccaaattggggggaatggaaaattggatgaatgagtggtatatgatggaatgggttccatcacattcca 41404117  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    |||||||||     |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  41404116 ttccattccattatttttttacaaaaccaaacaatggaacatggctccatcccactccattccat 41404052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 226 - 407
Target Start/End: Complemental strand, 7741250 - 7741058
Alignment:
Q  226 aatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat-gagtggtattggatggaatgggttccatcacactccattc 324  Q
    ||||| ||||||| |||||||| |||  ||||||||||| |||||||| ||||   ||| ||  ||||||||| ||||||||||||||||||||| ||||    
T  7741250 aatgttttccatttcattggattcacttcaaattggatgaaatgaaaatttggttaaatggatgggtattggaaggaatgggttccatcacactctattc 7741151  T
Q  325 cattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccac-----tccattccatcactctccatcaatccaaacatagcc 407  Q
    ||||||     ||||||||||||| |||||||||||||||||| ||||||||     ||||||||| ||||||||||||||||||||||||||    
T  7741150 cattccatttattttttacaaaactaaacaatggaacatggttacatcccactctattccattccaccactctccatcaatccaaacatagcc 7741058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 222 - 413
Target Start/End: Complemental strand, 39793725 - 39793534
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||    |||||||  ||||||||||||||  |||||| ||||| ||    
T  39793725 tattaatgtgttccatttcattggatacaccctaaattagaaggaatgaaaaattgactaaatgagttttattggatggaatgacttccattacacttca 39793626  T
Q  322 ttccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagccttagtt 413  Q
    ||||| |||| ||||||||| | ||| ||||||| ||||| | |||||| |||||||||  |||||| | ||||  ||||||||||| ||||    
T  39793625 ttccaatcctcttttacaaatctaaataatggaatatggtcttatcccattccattccactactctctaccaatttaaacatagcctaagtt 39793534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 282 - 410
Target Start/End: Complemental strand, 49764985 - 49764852
Alignment:
Q  282 aatgagtggtattggatggaatgggttccatcacactccattccat-----tccttttttacaaaaccaaacaatggaacatggtttcatcccactccat 376  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||     || |||||| ||||| |||||||||||||||||||| |||||||||||     
T  49764985 aatgagtggtattggatgaaatgagttccatcatactccattccatcctattcattttttgcaaaatcaaacaatggaacatggttttatcccactccac 49764886  T
Q  377 tccatcactctccatcaatccaaacatagcctta 410  Q
    |||||  |  ||||||||||||||||||||||||    
T  49764885 tccattccattccatcaatccaaacatagcctta 49764852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 330
Target Start/End: Complemental strand, 48046546 - 48046438
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| |||| |||||||||||||||||||||||||||| |  |||||||||| ||||   |||| |||||||||||||||||| ||||||||||||||||    
T  48046546 tatttatgtattccattccattggatacaccccaaattagggggaatgaaaatttggcttaatgggtggtattggatggaatgagttccatcacactcca 48046447  T
Q  322 ttccattcc 330  Q
    |||||||||    
T  48046446 ttccattcc 48046438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 16302758 - 16302852
Alignment:
Q  292 attggatggaatgggttccatcacactcca-----ttccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    ||||||||||||| ||||||||||||||||     |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  16302758 attggatggaatgagttccatcacactccattccattccattccttttttacaaaaccaaacaatggaatatggttttatcccactccattccat 16302852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 42117145 - 42117221
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||||||||| ||||| |||||||||||||| | |  || |||||||||||||||||| |||||||    
T  42117145 attccattggatacaccccaatttggagggaatgaaaaattgaaggtttgggtggtattggatggaatgagttccat 42117221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 49741449 - 49741373
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||||||||| ||| | |||||||||||||| | |  || |||||||||||||||||| |||||||    
T  49741449 attccattggatacaccccaatttgaagggaatgaaaaattgaaggtttgggtggtattggatggaatgagttccat 49741373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 366
Target Start/End: Original strand, 50139554 - 50139692
Alignment:
Q  233 tccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcctt 332  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||  || |||   ||||||| ||||||||||| |||||||  | ||||||||| ||| |    
T  50139554 tccattccattgcatacatcccaaattggatggaataaaaaataagaggaagtggtggtataggatggaatggattccatcttattccattccactccat 50139653  T
Q  333 -----ttttacaaaaccaaacaatggaacatggtttcat 366  Q
         ||||||||| |||||||| |||| ||| ||||||    
T  50139654 taaaattttacaaatccaaacaacggaatatgatttcat 50139692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 408
Target Start/End: Original strand, 50108993 - 50109173
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtgg--tattggatggaatgggttccatca-----cactccattccat 327  Q
    |||||||||| |||||||||||||||   | ||||| |||||||||||  | ||||  ||| ||||||||||| ||||||||     || |||| |||||    
T  50108993 cattccattgcatacaccccaaattgagggaaatgataaattggaagagagggtggtatatgggatggaatggattccatcatgttccattccactccat 50109092  T
Q  328 tccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcct 408  Q
    || ||| ||||||| ||||||||||||||||   | ||| |   |||||||||||||  |||| ||||||||||| |||||    
T  50109093 tcatttcttacaaatccaaacaatggaacataactccatactgttccattccatcacgttccaccaatccaaacaaagcct 50109173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 16302624 - 16302692
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccc 253  Q
    |||||||||||| |||  || ||||||||||| | | |||||||||||||||||||||| |||||||||    
T  16302624 tgaaatagaaaaagcaatgacaaaattgtaattataatattaatgtgttccattccatttgatacaccc 16302692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 355
Target Start/End: Original strand, 19551166 - 19551297
Alignment:
Q  228 tgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatca-----cactccat 322  Q
    |||||| ||||||||||  ||||||||||||| |  |||||||||||| | | ||  | |||||||||||||||||| |||||||||      | | |||    
T  19551166 tgtgttacattccattgcttacaccccaaattcgg-ggaatgaaaaatagaaggagagggtggtattggatggaatgagttccatcatgttctatttcat 19551264  T
Q  323 tccattccttttttacaaaaccaaacaatggaa 355  Q
    |||||| ||||||||||||||||||| ||||||    
T  19551265 tccattacttttttacaaaaccaaacgatggaa 19551297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 30190811 - 30190888
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||    
T  30190811 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccat 30190888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 31991631 - 31991711
Alignment:
Q  231 gttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||||||| |||||||||||  |||||||  ||||| | ||||||||||||| | ||||||| | ||||||    
T  31991631 gttccattccattggatac-ccccaaattggggggaatgaggaattgaaggaatgagtggtatagaatggaattgattccat 31991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 48046440 - 48046403
Alignment:
Q  372 tccattccatcactctccatcaatccaaacatagcctt 409  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  48046440 tccattccaccactctccatcaatccaaacatagcctt 48046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 410
Target Start/End: Original strand, 35306901 - 35306943
Alignment:
Q  368 ccactccattccatcactctccatcaatccaaacatagcctta 410  Q
    |||||||||||||| ||  ||||||||||||||||||||||||    
T  35306901 ccactccattccattacaatccatcaatccaaacatagcctta 35306943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 351
Target Start/End: Original strand, 12441135 - 12441168
Alignment:
Q  318 tccattccattccttttttacaaaaccaaacaat 351  Q
    |||||||||||||||||||| |||||||||||||    
T  12441135 tccattccattccttttttagaaaaccaaacaat 12441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 16 - 405
Target Start/End: Complemental strand, 44246674 - 44246301
Alignment:
Q  16 gtcacaactaggaacattaaataattactatgccatggaaggcgtgagactttctggaagaaaaaactggagataagtgacctaaaatactaattagaga 115  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||                 
T  44246674 gtcacaacgaggaacattaaataactactatgtcatggaaggcgtgaggctttctggaagaaaaaactggagataaatgacctaaaa------------- 44246588  T
Q  116 gagagttgtaggagagagaaacagnnnnnnnnnnn--tcaagttgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattgt 213  Q
    ||||||||||||||||||||||||             |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44246587 gagagttgtaggagagagaaacaggaagaaaaaaaattcaagttgcacacacgcaagaagaaagaaggaggtgaaatagaaaatgcagggataaaattgt 44246488  T
Q  214 aataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatc 313  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  44246487 aataaaagtattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattgaaagaatgagtggtattggatggaatgagttccatc 44246388  T
Q  314 acactccattccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatag 405  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||     ||| ||||||||||||||||||||||||||||||||||    
T  44246387 acactccattccattccttttatacaaaaccaaacaatggagcatggtt-----ccattccattccatcactctccatcaatccaaacatag 44246301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 222 - 381
Target Start/End: Complemental strand, 28219167 - 28219002
Alignment:
Q  222 tattaatgtg-ttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcc 320  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  28219167 tattaatgtggttccattccattggatacaccccaaattgggtggaatgaaaaattgaaggaatgagtggtattggatggaatgggttccatcacactcc 28219068  T
Q  321 attccatt-----ccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    ||||||||     |||||||||||||||||||||||||||  ||| | ||||||||||||||||||    
T  28219067 attccattccatcccttttttacaaaaccaaacaatggaatgtggctccatcccactccattccat 28219002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 222 - 408
Target Start/End: Complemental strand, 10354403 - 10354207
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| |||| |||||||||||||||||||||  || ||||  |||||||||| ||||   |||| |||||||||||||||||| ||| |||| |||||||    
T  10354403 tatttatgtattccattccattggatacaccttaatttggggggaatgaaaatttggcttaatgggtggtattggatggaatgagtttcatcgcactcca 10354304  T
Q  322 ttcca-----ttccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat-----cactctccatcaatccaaacatagcct 408  Q
    |||||     |||||||||| ||||| |||||||| ||| ||||||| |||| ||||||||||||     |||||||||||||||||||||||||||    
T  10354303 ttccattccattccttttttgcaaaatcaaacaatagaatatggttttatcctactccattccattccaccactctccatcaatccaaacatagcct 10354207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 232 - 407
Target Start/End: Original strand, 1499213 - 1499394
Alignment:
Q  232 ttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcct 331  Q
    ||||||||||||||||||||| ||||||||  | ||| |||||||||  |||||| |||||||||||||||||  |||||||||||| |||||||||||     
T  1499213 ttccattccattggatacacctcaaattgggggaaataaaaaattggttgaatgattggtattggatggaatgaattccatcacactgcattccattcca 1499312  T
Q  332 ttttt------acaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcc 407  Q
    |||||      |||||| |||||||| |||  ||| |||||| || |||||||||||||| |||| |||| |||||||||||    
T  1499313 tttttttttatacaaaagcaaacaatagaatgtggcttcatctcaatccattccatcactatccaccaattcaaacatagcc 1499394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 28199158 - 28199333
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    |||||||||||  | |||||||||| ||||||     |||||||||||||||| |||||||||||||||||| ||||  |||||| ||||||| | ||||    
T  28199158 tgaaatagaaatagtagggataaaaatgtaattgggttattaatgtgttccatcccattggatacaccccaatttgggaggaatggaaaattgaatgaat 28199257  T
Q  285 gagtggtattggatggaatgggttccatcacactccattccattcctt-----ttttacaaaaccaaacaatggaa 355  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||| |     |||| ||||||||||||||||||    
T  28199258 gagtggtattggatggaataagttccatcacattccattcgattccattacaattttccaaaaccaaacaatggaa 28199333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 413
Target Start/End: Original strand, 17999929 - 18000123
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcc- 320  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||| |||||| ||||   ||||||||||||||||| |||||| ||||||||||||||     
T  17999929 tattaatgtattccattccatcggatacaccccaaattggaggga-tgaaaatttggcttaatgagtggtattggatagaatggattccatcacactcca 18000027  T
Q  321 ---------attccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagccttag 411  Q
             ||||||||| | ||| | ||||||||| |||| |||||||||     ||| |||||||||||||||||||||||||||||||||| |||||    
T  18000028 ttccattcaattccattcatatttcataaaaccaaa-aatgaaacatggtt-----ccattccattccatcactctccatcaatccaaacatagtcttag 18000121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 282 - 414
Target Start/End: Original strand, 7444718 - 7444865
Alignment:
Q  282 aatgagtggtattggatggaatgggttccatcacactccattccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactcca- 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||| |||||||||||||||||  ||| |  |||||||||||     
T  7444718 aatgagtggtattggatggaatgggttccatcacactccattccattccattcattttttagaaaaccaaacaatggaatgtggatatatcccactccat 7444817  T
Q  376 ---------ttccatcactctccatcaatccaaacatagccttagttt 414  Q
             ||||||||||||||||||||||||||| ||||| |||||    
T  7444818 tccattccattccatcactctccatcaatccaaacaaagcctcagttt 7444865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 20717593 - 20717688
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  20717593 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 20717688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 410
Target Start/End: Complemental strand, 6476804 - 6476766
Alignment:
Q  372 tccattccatcactctccatcaatccaaacatagcctta 410  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6476804 tccattccaccactctccatcaatccaaacatagcctta 6476766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 410
Target Start/End: Original strand, 14329055 - 14329091
Alignment:
Q  374 cattccatcactctccatcaatccaaacatagcctta 410  Q
    |||||||||||||||||||||| ||||||||||||||    
T  14329055 cattccatcactctccatcaattcaaacatagcctta 14329091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 411
Target Start/End: Complemental strand, 27011529 - 27011130
Alignment:
Q  16 gtcacaactaggaacattaaataattactatgccatggaaggcgtgagactttctggaagaaaaaa-ctggagataagtgacctaaaatactaattagag 114  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||| ||  |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  27011529 gtcacaacgaggaacattaaataactactaggccatggaaggcgttaggttttctggaagaaaaaaactgtagataagtgacctaaaatactaattagag 27011430  T
Q  115 agagagttgtaggagagagaaacagnnnnnnnnnnnt---caagttgcacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaatt 211  Q
    |||||||||||||||||||||||||               ||| ||||||||||||||||||           |||||||||||||||||||||||||||    
T  27011429 agagagttgtaggagagagaaacaggaagaaaaaaaaatgcaacttgcacacacgcaagaag-----------tgaaatagaaaatgcagggataaaatt 27011341  T
Q  212 -gtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttcc 310  Q
     ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27011340 tgtaataaaattattaatgtgtttcattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttcc 27011241  T
Q  311 atcacactccattcca-----ttccttttttacaaaaccaaacaatggaacatggtttcatcccac-----tccattccatcactctccatcaatccaaa 400  Q
    ||||||||||||||||     |||||||||||||||||||||||||||||||||||| ||||||||     |||||||||||||||||||||||||||||    
T  27011240 atcacactccattccattccattccttttttacaaaaccaaacaatggaacatggttccatcccactccattccattccatcactctccatcaatccaaa 27011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 222 - 381
Target Start/End: Original strand, 42029265 - 42029430
Alignment:
Q  222 tattaatgtg-ttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcc 320  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  42029265 tattaatgtggttccattccattggatacaccccaaattgggtggaatgaaaaattgaaggaatgagtggtattggatggaatgggttccatcatactcc 42029364  T
Q  321 attccatt-----ccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    ||||||||     |||||||||||||||||||||||||||  ||| | ||||||||||||||||||    
T  42029365 attccattccatcccttttttacaaaaccaaacaatggaatgtggctccatcccactccattccat 42029430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 222 - 408
Target Start/End: Original strand, 39439841 - 39440042
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| |||| ||||||||||||||||||||||||||||||  |||||||||| ||||   |||| |||||||||||||||||| ||||||||||||||||    
T  39439841 tatttatgtattccattccattggatacaccccaaattggggggaatgaaaatttggtttaatgggtggtattggatggaatgagttccatcacactcca 39439940  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat----------cactctccatcaatccaaacatagc 406  Q
    |||||||||     |||||| |||||||||||||||||| ||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  39439941 ttccattccattctttttttgcaaaaccaaacaatggaatatggttttatcccactccattccattccattccaccactctccatcaatccaaacatagc 39440040  T
Q  407 ct 408  Q
    ||    
T  39440041 ct 39440042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 185 - 355
Target Start/End: Complemental strand, 25045557 - 25045382
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    |||||||||||  | |||||||||| ||||||  |  |||||||||||||||||||||||||||||| |||| ||||  |||||| ||||||||| ||||    
T  25045557 tgaaatagaaatagtagggataaaaatgtaattgagttattaatgtgttccattccattggatacacaccaatttgggaggaatggaaaattggatgaat 25045458  T
Q  285 gagtggtattggatggaatgggttccatcacactccattccattcctt-----ttttacaaaaccaaacaatggaa 355  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |     |||| ||||||||||||||||||    
T  25045457 gagtggtattggatggaatgagttccatcacattccattccattccattacaattttgcaaaaccaaacaatggaa 25045382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 200 - 323
Target Start/End: Complemental strand, 32278528 - 32278405
Alignment:
Q  200 agggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatg 299  Q
    |||||||||| ||||||  |  ||||||||||||| ||||||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||||||||    
T  32278528 agggataaaaatgtaattgagttattaatgtgttcaattccattggatacaccccaatttgggaggaatggaaaattggatgaatgagtggtattggatg 32278429  T
Q  300 gaatgggttccatcacactccatt 323  Q
    ||||| ||||||||||| ||||||    
T  32278428 gaatgagttccatcacattccatt 32278405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 226 - 356
Target Start/End: Original strand, 24374193 - 24374318
Alignment:
Q  226 aatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattcc 325  Q
    |||||||||||||||  | ||||||||| ||||||||||||||||||||||||   | || ||||||||||||||||||| | |||||     ||| |||    
T  24374193 aatgtgttccattccgctcgatacaccctaaattggatggaatgaaaaattggctaagtgggtggtattggatggaatggataccatc-----ccactcc 24374287  T
Q  326 attccttttttacaaaaccaaacaatggaac 356  Q
    |||||||||||||||||||||||||||||||    
T  24374288 attccttttttacaaaaccaaacaatggaac 24374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 40024811 - 40024906
Alignment:
Q  202 ggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattgga 297  Q
    ||||||| ||||||||  | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | |||||||||| ||||||    
T  40024811 ggataaagttgtaatattattattaatgtgttccattccattggatacaccccaaattgggaggaatgaaaaattgaaggaatgagtggcattgga 40024906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 381
Target Start/End: Original strand, 29765165 - 29765363
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattgga-agaa 283  Q
    ||||||||||||  |||||||||||| ||| | | | |||| ||| |||| ||||||||| |||||||||||||| |  | |||||||| ||||| | ||    
T  29765165 tgaaatagaaaa--cagggataaaatcgtagttacattatttatgggttcgattccattgcatacaccccaaatttggggtaatgaaaatttggagaaaa 29765262  T
Q  284 tgagtggtattggatggaatgggttccatcacactccattccattccttt----tttacaaaaccaaacaatggaacatggtttcatcccactccattcc 379  Q
    || ||||||||||||||||| | ||||||||  |||||||||||||| ||    |||||||| |||||||||||||  | | ||||||||||||||||||    
T  29765263 tg-gtggtattggatggaattgattccatcatgctccattccattccattatgttttacaaagccaaacaatggaatctaggttcatcccactccattcc 29765361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 200 - 404
Target Start/End: Complemental strand, 44713394 - 44713184
Alignment:
Q  200 agggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattgga-- 297  Q
    ||||| ||||||||||| | |  ||| || |||||||||||||| ||||||||||||||| |  |||||||||||||||   ||||||||||||||||      
T  44713394 agggacaaaattgtaattatataattgatatgttccattccattagatacaccccaaatttgg-ggaatgaaaaattggttaaatgagtggtattggaat 44713296  T
Q  298 -----tggaatgggttccatcacactccattccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat-----cactct 387  Q
         ||||||| |||||||||||     |||||||  ||||||||||||| |||||||||||  ||| | |||||| |||||||||||     ||||||    
T  44713295 ttggatggaatgagttccatcaca-----ttccattaattttttacaaaactaaacaatggaatgtggctccatccctctccattccattccaccactct 44713201  T
Q  388 ccatcaatccaaacata 404  Q
    |||||||||||||||||    
T  44713200 ccatcaatccaaacata 44713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 2230101 - 2230209
Alignment:
Q  239 ccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattccttttttac 338  Q
    ||||||||||||| ||||||||    |||||||||||||   |||||  |||||||||||| |||||||||||||||| |||||| ||||| ||||||||    
T  2230101 ccattggatacactccaaattgaggagaatgaaaaattgagtgaatggatggtattggatgcaatgggttccatcacattccatttcattcattttttac 2230200  T
Q  339 aaaaccaaa 347  Q
    |||||||||    
T  2230201 aaaaccaaa 2230209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 355
Target Start/End: Complemental strand, 25909507 - 25909352
Alignment:
Q  206 aaaattgtaataaaactattaatgt-gttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatg 304  Q
    ||||||||||| | | |||||| || |||||||| ||||| ||||||||||||||||   |||||||||||||||| | || ||||||||||||||||||    
T  25909507 aaaattgtaattacattattaaggttgttccatttcattgcatacaccccaaattggggagaatgaaaaattggaatagtgggtggtattggatggaatg 25909408  T
Q  305 ggttccatca-----cactccattccattccttttttacaaaaccaaacaatggaa 355  Q
     ||||||| |     || | ||||||||||  || |||||||||||||||||||||    
T  25909407 agttccattatatttcatttcattccattcacttattacaaaaccaaacaatggaa 25909352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 412
Target Start/End: Complemental strand, 14567978 - 14567797
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttcc-----atcacactccattccattcc 330  Q
    ||||||||||||||||||||||||||  |||||||||||||| | |  ||  ||||||||||||||||| |||||     ||  || |||| |||||||     
T  14567978 attccattggatacaccccaaattggggggaatgaaaaattgaaggtttggatggtattggatggaatgagttccattgtattccattccactccattca 14567879  T
Q  331 ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagccttagt 412  Q
     ||||| |||| ||||||||||||| ||  ||   | |||||||||||||||||   ||| |||||||||||||||| ||||    
T  14567878 ctttttgcaaatccaaacaatggaatataattatgtaccactccattccatcacataccaccaatccaaacatagccctagt 14567797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 352
Target Start/End: Complemental strand, 42957387 - 42957221
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    |||||||||||| |||||||||||| |||||| | | ||||||| |||| |||| |||  |||| || |||| |||| | | |||| |||||||| ||||    
T  42957387 tgaaatagaaaaagcagggataaaaatgtaattagattattaatatgtttcatttcatctgataaactccaatttgg-taggatgagaaattggatgaat 42957289  T
Q  285 gagtggtattggatggaatgggttccatcacactccattccattccttttttacaaaaccaaacaatg 352  Q
    || |||| ||||||||| || ||| ||||| ||||| || |||| | ||||| |||||||||| ||||    
T  42957288 gaatggtgttggatggattgagtttcatcatactccgtttcatttcatttttgcaaaaccaaagaatg 42957221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 25045361 - 25045314
Alignment:
Q  361 tttcatcccactccattccatcactctccatcaatccaaacatagcct 408  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  25045361 tttcattccattccattccaccactctccatcaatccaaacatagcct 25045314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 49368372 - 49368467
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||   |||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  49368372 cattccattggatacctcccaaattggggagaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 49368467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 351
Target Start/End: Complemental strand, 23466826 - 23466708
Alignment:
Q  240 cattggatacaccccaaattggatggaa-tgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccatt------cctt 332  Q
    ||||| ||||||||||||||||  |||| || ||||||||   |||  ||||||||||||| |||| ||||||| ||||| |||||||||      | ||    
T  23466826 cattgcatacaccccaaattgggaggaactggaaaattggttaaataggtggtattggatgcaatgagttccattacactacattccattctattccttt 23466727  T
Q  333 ttttacaaaaccaaacaat 351  Q
    |||||||||||||||||||    
T  23466726 ttttacaaaaccaaacaat 23466708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 35231957 - 35231997
Alignment:
Q  368 ccactccattccatcactctccatcaatccaaacatagcct 408  Q
    |||||||||||||| ||  ||||||||||||||||||||||    
T  35231957 ccactccattccattacaatccatcaatccaaacatagcct 35231997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 40026083 - 40026151
Alignment:
Q  292 attggatggaatgggttccatcacactccattccattcc-----ttttttacaaaaccaaacaatggaa 355  Q
    |||||||||||| |||||| ||||| ||||||||||||      |||||||||||| ||||||||||||    
T  40026083 attggatggaataggttccttcacattccattccattctattcattttttacaaaatcaaacaatggaa 40026151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 424 - 594
Target Start/End: Original strand, 34091352 - 34091522
Alignment:
Q  424 tggtattagatcttcctcgcatgcaaggaatcacaagtcttcatgttgaaggtgactttaaagtcctaattgatacggtgatacagaacattaacttcca 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34091352 tggtattagatcttcctcgcatgcaaggaatcacaagtcttcatgttgaaggtgactttaaagtcctaattgatacggtgatacaaaacattaacttcca 34091451  T
Q  524 tgtaaacatatctgctctagtctatcgtattagacaactctattcgtgttgaaagtgactttaaaatgcta 594  Q
    || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34091452 tgcaaacatatctgctctagtctgtcgtattagacaactctattcgtgttgaaagtgactttaaaatgcta 34091522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 220 - 408
Target Start/End: Complemental strand, 38679890 - 38679688
Alignment:
Q  220 actattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactc 319  Q
    ||||||||||| |||||||| ||||||||||||||||||| |  |||||||||| ||||   ||||||| |||||| |||||||| ||||||||||||||    
T  38679890 actattaatgtattccattcaattggatacaccccaaatttgg-ggaatgaaaatttggcttaatgagtagtattgaatggaatgagttccatcacactc 38679792  T
Q  320 cattccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatc----------ccactccattccatcactctccatcaatccaaacata 404  Q
    ||||||||||      ||||||||||||||||||||||||||||| ||| |||          ||| |||||||||||||||||||||||||||||||||    
T  38679791 cattccattctattcattttttacaaaaccaaacaatggaacatgattttatctcactccactccattccattccatcactctccatcaatccaaacata 38679692  T
Q  405 gcct 408  Q
    ||||    
T  38679691 gcct 38679688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 159 - 351
Target Start/End: Original strand, 28873629 - 28873829
Alignment:
Q  159 cacacacgcaagaagaaagaagaaggtgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaat 258  Q
    |||| |||||||||| |||||||||||||||||||||| | ||  |||||||||||||   | ||||||||||||||||||||||  |||||||  ||||    
T  28873629 cacatacgcaagaaggaagaagaaggtgaaatagaaaa-gtagaaataaaattgtaattggattattaatgtgttccattccattaaatacaccttaaat 28873727  T
Q  259 tggatggaatgaaaaatt-ggaagaatgagtgg---tattggatggaatgggttccatcacac-----tccattccattccttttttacaaaaccaaaca 349  Q
    |||| ||||| ||||||| ||| ||| ||||||   ||||||||||||| |||||||||||||     |||||| |||||||||||||||||||||||||    
T  28873728 tggagggaataaaaaatttggatgaaagagtggtggtattggatggaataggttccatcacacaccattccatttcattccttttttacaaaaccaaaca 28873827  T
Q  350 at 351  Q
    ||    
T  28873828 at 28873829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 282 - 408
Target Start/End: Original strand, 42025391 - 42025527
Alignment:
Q  282 aatgagtggtattggatggaatgggttccatcacactcc-----attccattccttttttacaaaaccaaacaatggaacatggtttcatcccac----- 371  Q
    |||||||||||||||||||||||||||||||||||||||     ||||||||| ||||||||||||||||||||||||| |||| |  |||||||         
T  42025391 aatgagtggtattggatggaatgggttccatcacactccattcaattccattcattttttacaaaaccaaacaatggaatatggatatatcccactccat 42025490  T
Q  372 tccattccatcactctccatcaatccaaacatagcct 408  Q
    ||||||||||||||||||||||||||||||| |||||    
T  42025491 tccattccatcactctccatcaatccaaacaaagcct 42025527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 34924729 - 34924922
Alignment:
Q  229 gtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtatt-ggatggaatgggttccatcacactccattccat 327  Q
    ||||||||||||||| |||||  ||||| ||||  ||||||||||| ||    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  34924729 gtgttccattccattagatacctcccaatttggggggaatgaaaaaatgactaaatgagtggtatttggatggaatgggttccatcacactccattccat 34924828  T
Q  328 tcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactcca----------ttccatcactctccatcaatccaaacatagc 406  Q
    |||     ||||||||| ||||||||||||| |  ||| |  |||||||||||          |||||||||||||||||||||||||||||||    
T  34924829 tccattcattttttacataaccaaacaatgggatgtggatatatcccactccattccattccattccatcactctccatcaatccaaacatagc 34924922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 233 - 383
Target Start/End: Complemental strand, 29844375 - 29844220
Alignment:
Q  233 tccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcctt 332  Q
    |||||||||||| ||||  |||||||||||| |||||||||||  || |||   ||||||| ||||||||||| |||||||| | |||||| || ||| |    
T  29844375 tccattccattgcatacctcccaaattggatagaatgaaaaataagaggaagtggtggtataggatggaatggattccatcatattccatttcactccat 29844276  T
Q  333 -----ttttacaaaaccaaacaatggaacatggtttcatcccactccattccatca 383  Q
         ||||||||| ||||||||||||| ||| || |||| |||||||||||||||    
T  29844275 taaaattttacaaatccaaacaatggaatatgattccatctcactccattccatca 29844220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 229 - 408
Target Start/End: Original strand, 14112325 - 14112521
Alignment:
Q  229 gtgttccattccattggatacaccccaaatt-ggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactc-----cat 322  Q
    |||||||||||||||||||||  ||| | || ||  ||||||||||| ||    |||||||||||||||||||||| |||||||||||||||     |||    
T  14112325 gtgttccattccattggatacctccccatttaggggggaatgaaaaaatgactaaatgagtggtattggatggaatcggttccatcacactctattccat 14112424  T
Q  323 tccattccttttttac-aaaaccaaacaatggaacatggtttcatcccac----------tccattccatcactctccatcaatccaaacatagcct 408  Q
    ||||||| |||||||| | ||||||||||||| |  ||| |  |||||||          |||||||||||||||||||||||||||||||||||||    
T  14112425 tccattcattttttactataaccaaacaatgggatgtggatatatcccactccattccattccattccatcactctccatcaatccaaacatagcct 14112521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 632
Target Start/End: Original strand, 34091678 - 34091719
Alignment:
Q  591 gctatgaaagtccatctaattccttttattttagcctttgct 632  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34091678 gctatgaaagtccatctaattccttttattttagcctttgct 34091719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 22531293 - 22531388
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  22531293 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 22531388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 22535978 - 22536073
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  22535978 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 22536073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 25993899 - 25993994
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  25993899 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 25993994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 30800270 - 30800196
Alignment:
Q  282 aatgagtggtattggatggaatgggttccatcacactc-----cattccattccttttttacaaaaccaaacaat 351  Q
    ||||| ||||||||||||||||| ||||||||||||||     ||||||| |||||||||||||||| |||||||    
T  30800270 aatgaatggtattggatggaatgagttccatcacactctatttcattccactccttttttacaaaactaaacaat 30800196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 11354902 - 11354826
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| | |  || |||||||||||||||||  |||||||    
T  11354902 attccattggatacaccccaatttggagggaataaaaaattgaaggtttgggtggtattggatggaatcagttccat 11354826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 564
Target Start/End: Original strand, 34091498 - 34091595
Alignment:
Q  467 tgttgaaggtgactttaaagtcctaattgatacggtgatacagaacattaacttccatgtaaacatatctgctctagtctatcgtattagacaactct 564  Q
    ||||||| ||||||||||| | |||||| ||| ||| ||| | |||||||||||| |  |||||||| | |||||||| | ||| |||||||||||||    
T  34091498 tgttgaaagtgactttaaaatgctaattaatatggtaatagataacattaacttcaacataaacatacccgctctagtgtgtcgcattagacaactct 34091595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 330
Target Start/End: Original strand, 5358211 - 5358319
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||| ||| ||||||||||||| ||||||| ||||||  |  |||||||||| | ||   ||||||||||||||||| |||  ||||||||||| | ||    
T  5358211 tattattgtattccattccattgcatacacctcaaattatagagaatgaaaaaatagatatatgagtggtattggatgaaatttgttccatcacatttca 5358310  T
Q  322 ttccattcc 330  Q
    ||| |||||    
T  5358311 ttctattcc 5358319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 222 - 410
Target Start/End: Original strand, 12404 - 12600
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  12404 tattgatgtgttccattctattggatacacctcaaattggatggaatggaaaattgaaggaatgagtggtattggatggaatgggttccatcacactcca 12503  T
Q  322 ttccattcc--------ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcctta 410  Q
    |||||||||        |||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  12504 ttccattccattattttttttttacaaaaccaaacaatggaatgtggtcccatcccactccattccatcactctccaccaatccaaacatagcctta 12600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 222 - 381
Target Start/End: Original strand, 30119 - 30283
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||| |||||||||||||  ||||||||||||||||||||| ||||    
T  30119 tattaatgtgttccatttcattggatacaccccaaattggggggaatggaaaattggatgaatgagtggtatatgatggaatgggttccatcacattcca 30218  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    |||||||||     |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  30219 ttccattccattatttttttacaaaaccaaacaatggaacatggctccatcccactccattccat 30283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 4e-52; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 185 - 412
Target Start/End: Complemental strand, 30085085 - 30084853
Alignment:
Q  185 tgaaatagaaaatgcagggataaaattgtaataaaactattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaat 284  Q
    |||||||||||  | |||||||||| ||||||  |  ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| ||||    
T  30085085 tgaaatagaaatagtagggataaaaatgtaattgagttattaatgtgttccattccattggatacaccccaatttgggaggaatggaaaattggatgaat 30084986  T
Q  285 gagtggtattggatggaatgggttccatcacactccattccattcctt-----ttttacaaaaccaaacaatggaacatggtttcatcccactccattcc 379  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |     |||| ||||||||||||||||||  ||  |  || |||  |||||||    
T  30084985 gagtggtattggatggaatgagttccatcacattccattccattccattacaattttgcaaaaccaaacaatggaatctgactctattccatcccattcc 30084886  T
Q  380 atcactctccatcaatccaaacatagccttagt 412  Q
    | |||||||||||||||||||||||||||||||    
T  30084885 accactctccatcaatccaaacatagccttagt 30084853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 222 - 378
Target Start/End: Complemental strand, 4943676 - 4943514
Alignment:
Q  222 tattaatgtg-ttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcc 320  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  4943676 tattaatgtggttccattccattggaaacaccccaaattgggtggaatggaaaattgaaggaatgagtggtattggatggaatgggttccatcacactcc 4943577  T
Q  321 attccatt-----ccttttttacaaaaccaaacaatggaacatggtttcatcccactccattc 378  Q
    ||||||||     ||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  4943576 attccattccatcccttttttacaaaaccaaacaatggaatatggctccatcccactccattc 4943514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 226 - 410
Target Start/End: Complemental strand, 9159580 - 9159392
Alignment:
Q  226 aatgtgttccattccattggat--acaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccatt 323  Q
    |||||||||||||| |||||||  ||||| |||||| |  |||||| || ||||||  |||| |||||||||||||||||||||||||||||| ||||||    
T  9159580 aatgtgttccattctattggatgcacacctcaaattagggggaatggaagattggataaatgggtggtattggatggaatgggttccatcacattccatt 9159481  T
Q  324 ccattcc---ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcctta 410  Q
    || ||||   |||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||| || ||||||||||||| |||||    
T  9159480 cctttccattttttttacaaaaccaaacaatggaacatggctctatcccactcca-tccatcactcttcaccaatccaaacataacctta 9159392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 222 - 408
Target Start/End: Complemental strand, 11617382 - 11617181
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| |||| |||||||||||||||||||| | || ||||  |||||||||| ||||   |||| |||||||||||||||||| ||||||||||||||||    
T  11617382 tatttatgtattccattccattggatacacactaatttggggggaatgaaaatttggcttaatgggtggtattggatggaatgagttccatcacactcca 11617283  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat----------cactctccatcaatccaaacatagc 406  Q
    |||||||||     |||||| |||||||||||||||||| ||||||| |||||||||||||||||          |||||||||||||||||||||||||    
T  11617282 ttccattccattcattttttgcaaaaccaaacaatggaatatggttttatcccactccattccattccattccaccactctccatcaatccaaacatagc 11617183  T
Q  407 ct 408  Q
    ||    
T  11617182 ct 11617181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 355
Target Start/End: Original strand, 5247874 - 5248005
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||||||||||||||||| ||||| ||||||  ||||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||||||| ||||    
T  5247874 tattaatgtgttccattctattgggtacaccttaaattggatggaatggaaaattggttgaatgagtggtattggattgaatgggttccatcacattcca 5247973  T
Q  322 ttccattccttttttacaaaaccaaacaatggaa 355  Q
    ||   ||  |||||||||||||||||||||||||    
T  5247974 tt--tttttttttttacaaaaccaaacaatggaa 5248005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 7505998 - 7506129
Alignment:
Q  255 aaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc-----ttttttacaaaaccaaaca 349  Q
    |||||||  |||||| ||||||||   |||||||||||||||||||||| | ||||||||||||| ||| ||||||     |||||||||||||||||||    
T  7505998 aaattggggggaatggaaaattggttaaatgagtggtattggatggaattgattccatcacactctatttcattccattaattttttacaaaaccaaaca 7506097  T
Q  350 atggaacatggtttcatcccactccattccat 381  Q
    ||||||  ||| || |||||||||||||||||    
T  7506098 atggaatgtggctttatcccactccattccat 7506129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 29293310 - 29293198
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||| |||||||||| ||||||| |||||||||||  |||||||||| |||    ||||| ||| |||||||||| ||||||||||| ||||||     
T  29293310 tattaatgtattccattccactggatac-ccccaaattggggggaatgaaaatttgatttaatgaatggcattggatggagtgggttccatcccactccg 29293212  T
Q  322 ttccattccttttt 335  Q
    ||||||||| ||||    
T  29293211 ttccattccatttt 29293198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 32233137 - 32233061
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||||||||| ||||| |||||||||||||| | |  || |||||||||||||||||| |||||||    
T  32233137 attccattggatacaccccaatttggagggaatgaaaaattgaaggtttgggtggtattggatggaatgagttccat 32233061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 13191724 - 13191819
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  13191724 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 13191819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 381
Target Start/End: Original strand, 31933476 - 31933624
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||||||||||| |||||||||| ||||||| |  ||| |  ||||||||||||||   | |||| ||||||||||||||||| ||||||| |||         
T  31933476 tattaatgtgtttcattccattgaatacacctctgattagg-ggaatgaaaaattgattggatgaatggtattggatggaatgagttccattaca----- 31933569  T
Q  322 ttccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
         ||||||||||||||||||||||||| ||||   |||| ||| |||| ||||||||    
T  31933570 -----ttccttttttacaaaaccaaacaatagaaccacgttttatctcacttcattccat 31933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 411
Target Start/End: Original strand, 16597819 - 16597862
Alignment:
Q  368 ccactccattccatcactctccatcaatccaaacatagccttag 411  Q
    |||||||||||||| ||  |||||||||||||||||||||||||    
T  16597819 ccactccattccattacattccatcaatccaaacatagccttag 16597862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 222 - 408
Target Start/End: Complemental strand, 46944194 - 46944003
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||  | ||||||||||||||||||||||| ||||||||||||||||    
T  46944194 tattaatgtgctacattccattggatacaccccaaattgggtggaatggaaaattgacaaaatgagtggtattggatggaatgagttccatcacactcca 46944095  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagcct 408  Q
    |||||||||     ||||||||| |||||||||||||||  | | |  |||||| ||||||||||||| ||||| |||||||||||||||||    
T  46944094 ttccattccattcattttttacataaccaaacaatggaatgttgatctatcccattccattccatcacactccaccaatccaaacatagcct 46944003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 222 - 381
Target Start/End: Original strand, 21263563 - 21263728
Alignment:
Q  222 tattaatgtg-ttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacact-- 318  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||      
T  21263563 tattaatgtggtttcattccattcgatacaccccaaattggatggaatggaaaattgaaggaatgagtggtattggatggaatgggttccatcacactcc 21263662  T
Q  319 ---ccattccattccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
       ||||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||||||    
T  21263663 atcccattccatcccttttttacaaaaccaaacaatggaatgtggctccatcccactccattccat 21263728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 222 - 410
Target Start/End: Complemental strand, 35292193 - 35291995
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||| |||| ||||||||||||||||||||||||||||||| | |||||||| ||||   |||| |||||||||||| ||||| ||| ||||||||||||    
T  35292193 tatttatgtattccattccattggatacaccccaaattggaggaaatgaaaatttggcttaatgggtggtattggattgaatgagttacatcacactcca 35292094  T
Q  322 ttcca-----ttccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat-----cactctccatcaatccaaacatagcctta 410  Q
    |||||     |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||     ||||||||||||||||||||||| |||||    
T  35292093 ttccattccattccttttttgcaaaaccaaacaatggaatatggttttatcccactccattccattccaccactctccatcaatccaaacataacctta 35291995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 222 - 381
Target Start/End: Complemental strand, 50859315 - 50859151
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| || ||||   |||| ||||||||||||||||||  |||||||||||||||    
T  50859315 tattaatgtgttccattccattggatacaccccaaattgggaggaatgacaatttggctaaatgggtggtattggatggaatgaattccatcacactcca 50859216  T
Q  322 ttccat-----tccttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    ||||||     || ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  50859215 ttccatcccactctttttttacaaaaccaaacaatggaacatgcttccatcccactccattccat 50859151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 378
Target Start/End: Complemental strand, 22405185 - 22405023
Alignment:
Q  222 tattaatgtg-ttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcc 320  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||| | |||||| ||||||||||||||||| |||||||||||||||    
T  22405185 tattaatgtggttccattccattggatacactccaaattgggtggaatggaaaattgaaggaatgattggtattggatggaatgagttccatcacactcc 22405086  T
Q  321 attccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattc 378  Q
    ||||||||||     |||||||||||||||||||||||||  ||| | ||||||||| |||||    
T  22405085 attccattccatcctttttttacaaaaccaaacaatggaatgtggctccatcccactgcattc 22405023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 413
Target Start/End: Original strand, 41223649 - 41223844
Alignment:
Q  229 gtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtatt-ggatggaatgggttccatcacactccattccat 327  Q
    |||||||||||||||||||||  ||||| ||||  ||||||||||| ||    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  41223649 gtgttccattccattggatacctcccaatttggggggaatgaaaaaatgactaaatgagtggtatttggatggaatgggttccatcacactccattccat 41223748  T
Q  328 tcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccac-----tccattccatcactctccatcaatccaaacatagccttagtt 413  Q
    |||     ||||||||| ||||||||||||| |  ||| |  |||||||     ||||||||||||||||||||||||||||||||||||||||||    
T  41223749 tccattcattttttacataaccaaacaatgggatgtggatatatcccactccattccattccatcactctccatcaatccaaacatagccttagtt 41223844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 222 - 410
Target Start/End: Original strand, 35033798 - 35034001
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||||||||||||||||||||||||||| || || ||||  |||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  35033798 tattaatgtgttccattccattggatacatcctaatttgggaggaatggaaaattggatgaatgagtggtattggatggaatgagttccatcacattcca 35033897  T
Q  322 ttccattcctt-----ttttacaaaaccaaacaatggaacatggttt----------catcccactccattccatcactctccatcaatccaaacatagc 406  Q
    ||||||||| |     |||| ||||||||||||||||||  ||  ||          ||| ||| ||||||||| |||||||||||||||||||||||||    
T  35033898 ttccattccattacaattttgcaaaaccaaacaatggaatctgactttattccaacccattccattccattccaccactctccatcaatccaaacatagc 35033997  T
Q  407 ctta 410  Q
    ||||    
T  35033998 ctta 35034001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 288 - 406
Target Start/End: Complemental strand, 3121310 - 3121182
Alignment:
Q  288 tggtattggatggaatgggttccatcacactccattccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat- 381  Q
    ||||||||||||||||| |||||||||||||||||||||||||     |||||| |||||||||||||||||| ||||||| |||||||||||||||||     
T  3121310 tggtattggatggaatgagttccatcacactccattccattccattctttttttgcaaaaccaaacaatggaatatggttttatcccactccattccatt 3121211  T
Q  382 ----cactctccatcaatccaaacatagc 406  Q
        |||||||||||||||||||||||||    
T  3121210 ccaccactctccatcaatccaaacatagc 3121182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 222 - 410
Target Start/End: Complemental strand, 48084830 - 48084627
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    ||||| ||| ||||||||||| | ||||  ||||||||||  |||||||||||||||   |||||||||||||||||| |||| ||||||| | ||||||    
T  48084830 tattattgtattccattccatcgtatacctcccaaattggggggaatgaaaaattggttaaatgagtggtattggatgaaatgagttccataagactcca 48084731  T
Q  322 ttccattcc----------ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat-----cactctccatcaatccaaacatagc 406  Q
    ||||||||           |||||||||||||||||||||||||  ||||||||||||||||||||||||     ||||||||||||||||||||||| |    
T  48084730 ttccattcaattctattaattttttacaaaaccaaacaatggaatgtggtttcatcccactccattccattccaccactctccatcaatccaaacatacc 48084631  T
Q  407 ctta 410  Q
    ||||    
T  48084630 ctta 48084627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 222 - 381
Target Start/End: Original strand, 41809873 - 41810042
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||||||| |||||||||||||| ||||| ||||||||||  |||||| ||||||||| |||||||||||||   |||||||||||||||||||| ||||    
T  41809873 tattaatgcgttccattccattgaatacatcccaaattggggggaatggaaaattggatgaatgagtggtatatcatggaatgggttccatcacattcca 41809972  T
Q  322 ttccattc----------cttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
    ||||||||           |||||||||||||||||||||||||||||  |  |||||||||||||||||    
T  41809973 ttccattcaattccactatttttttacaaaaccaaacaatggaacatgactctatcccactccattccat 41810042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 224 - 406
Target Start/End: Complemental strand, 31227843 - 31227657
Alignment:
Q  224 ttaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccatt 323  Q
    ||||||| |||||||||||||||||||| |||| ||||  |||||||||||||||   |||||||||||||||||||||||  |||||||||||| ||||    
T  31227843 ttaatgtattccattccattggatacactccaatttggg-ggaatgaaaaattggttaaatgagtggtattggatggaatgatttccatcacacttcatt 31227745  T
Q  324 ccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccatcactctccatcaatccaaacatagc 406  Q
    |||||||     ||||||||||||||||||| || || |||  |  ||||| |||||||||| | ||||  | |||||||||||||||    
T  31227744 ccattccattcattttttacaaaaccaaacattgaaatatgactctatccccctccattccaccgctctttaccaatccaaacatagc 31227657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 26861354 - 26861430
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||||||||| ||||| |||||||||||||| | |  || |||||||||||||||||| |||||||    
T  26861354 attccattggatacaccccaatttggagggaatgaaaaattgaaggtttgggtggtattggatggaatgagttccat 26861430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 4292685 - 4292759
Alignment:
Q  286 agtggtattggatggaatgggttccatcacac-----tccattccattccttttttacaaaaccaaacaatggaa 355  Q
    ||||||||||||||||||| ||||||||||||     ||||||||||| ||||||| ||||||||||||||||||    
T  4292685 agtggtattggatggaatgagttccatcacacaccattccattccattacttttttgcaaaaccaaacaatggaa 4292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 4342085 - 4342147
Alignment:
Q  293 ttggatggaatgggttccatcacactccattccattccttttttacaaaaccaaacaatggaa 355  Q
    ||||||||||||| ||||||||   ||||||||||| ||||||||||||||||||||||||||    
T  4342085 ttggatggaatggattccatcatgttccattccattacttttttacaaaaccaaacaatggaa 4342147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 55841497 - 55841423
Alignment:
Q  230 tgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatg 304  Q
    |||| |||||| ||| |||||| |||||||||| ||||||||||||| ||||| ||  || ||||||||||||||    
T  55841497 tgtttcattcctttgcatacactccaaattggaaggaatgaaaaattagaagagtggatgatattggatggaatg 55841423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 55777311 - 55777243
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatg 304  Q
    ||||| ||| |||||| |||||||||| ||||||||||||| ||||| ||  || ||||||||||||||    
T  55777311 attcctttgcatacactccaaattggaaggaatgaaaaattagaagagtggatgatattggatggaatg 55777243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 408
Target Start/End: Original strand, 44100 - 44301
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||||||||||| |||||||||||  ||||| ||||||||  |||||| ||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  44100 tattaatgtgtttcattccattgggaacacctcaaattggggggaatggaaaattggttaaatgggtggtattggatggaatgggttccatcacactcca 44199  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat----------cactctccatcaatccaaacatagc 406  Q
    |||||||||     ||||||||||||||||||||||||| |||| |  |||||||||||||||||          |||||||||||||||||||||||||    
T  44200 ttccattccattcattttttacaaaaccaaacaatggaatatggatctatcccactccattccattccattccaccactctccatcaatccaaacatagc 44299  T
Q  407 ct 408  Q
    ||    
T  44300 ct 44301  T

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Target: scaffold0022; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 408
Target Start/End: Original strand, 77821 - 78022
Alignment:
Q  222 tattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactcca 321  Q
    |||||||||||| |||||||||||  ||||| ||||||||  |||||| ||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  77821 tattaatgtgtttcattccattgggaacacctcaaattggggggaatggaaaattggttaaatgggtggtattggatggaatgggttccatcacactcca 77920  T
Q  322 ttccattcc-----ttttttacaaaaccaaacaatggaacatggtttcatcccactccattccat----------cactctccatcaatccaaacatagc 406  Q
    |||||||||     ||||||||||||||||||||||||| |||| |  |||||||||||||||||          |||||||||||||||||||||||||    
T  77921 ttccattccattcattttttacaaaaccaaacaatggaatatggatctatcccactccattccattccattccaccactctccatcaatccaaacatagc 78020  T
Q  407 ct 408  Q
    ||    
T  78021 ct 78022  T

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Target: scaffold0039 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 229 - 410
Target Start/End: Complemental strand, 57057 - 56861
Alignment:
Q  229 gtgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacac-----tccatt 323  Q
    |||||||||||||||||||||  ||||| ||||  ||||||||||| ||    |||||||||||||||||||||| |||||||||||||     ||||||    
T  57057 gtgttccattccattggatacctcccaatttggggggaatgaaaaaatgactaaatgagtggtattggatggaattggttccatcacactctattccatt 56958  T
Q  324 ccattccttttttacaaaaccaaacaatggaacatggtttcatcccactcca----------ttccatcactctccatcaatccaaacatagcctta 410  Q
    |||||| ||||||||| ||||||||||||| |  ||| |  |||||||||||          |||||||||||||||||||||||||||||||||||    
T  56957 ccattcattttttacataaccaaacaatgggatgtggatatatcccactccattccattcccttccatcactctccatcaatccaaacatagcctta 56861  T

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Target: scaffold0227 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 221 - 336
Alignment:
Q  271 aaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcctt-----ttttacaaaaccaaacaatggaacatggtttca 365  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |     |||||||||||||||||||||||  ||| | ||    
T  221 aaaattgaaggaatgagtggtattggatggaatgggttccatcacactccattccattccatcccatttttacaaaaccaaacaatggaatgtggctcca 320  T
Q  366 tcccactccattccat 381  Q
    |||||||| |||||||    
T  321 tcccactcaattccat 336  T

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Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 10871364 - 10871282
Alignment:
Q  230 tgttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccat 312  Q
    ||||||||||||||| ||||| |||||||||   |||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  10871364 tgttccattccattgcatacatcccaaattgaggggaatgaaaatttggaagagtgagtggtattggatgaaatgggttccat 10871282  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 33091271 - 33091176
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  33091271 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 33091176  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 312
Target Start/End: Original strand, 19694550 - 19694631
Alignment:
Q  231 gttccattccattggatacaccccaaattggatggaatgaaaaattggaagaatgag-tggtattggatggaatgggttccat 312  Q
    |||||||||||||| || |||||||||||||  ||||||||||| |||||| ||  | ||| |||||||||||||| ||||||    
T  19694550 gttccattccattgcatgcaccccaaattggggggaatgaaaaa-tggaaggatttgatggaattggatggaatggattccat 19694631  T

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Target: scaffold0097 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 21430 - 21525
Alignment:
Q  235 cattccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattcc 330  Q
    |||||||||||||||  ||||||||||  ||||||| |||||| | || |||||||||| | ||||||| ||||||||  || |||||||||||||    
T  21430 cattccattggatacctcccaaattggggggaatgagaaattgaaggattgagtggtatagaatggaattggttccattgcattccattccattcc 21525  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 381
Target Start/End: Original strand, 9216 - 9365
Alignment:
Q  236 attccattggatacaccccaaattggatggaatgaaaaattggaagaatgagtggtattggatggaatgggttccatcacactccattccattccttt-- 333  Q
    ||||||||| ||||  |||||||||||||||||||||| |  || |||   |||| || ||||||||||| |||||||| | || |||||| ||| ||      
T  9216 attccattgcatacctcccaaattggatggaatgaaaa-taagaggaagtggtggcataggatggaatggattccatcatattcaattccactccattaa 9314  T
Q  334 ---tttacaaaaccaaacaatggaacatggtttcatcccactccattccat 381  Q
       ||||||||  |||||||||||| ||| || ||||||||||||||||||    
T  9315 aattttacaaattcaaacaatggaatatgattccatcccactccattccat 9365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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