View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14969_low_23 (Length: 336)

Name: NF14969_low_23
Description: NF14969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14969_low_23
NF14969_low_23
[»] chr1 (36 HSPs)
chr1 (1-258)||(8116002-8116257)
chr1 (253-328)||(3572560-3572635)
chr1 (254-328)||(6911495-6911569)
chr1 (257-328)||(2430498-2430569)
chr1 (257-328)||(49822916-49822987)
chr1 (252-330)||(5806285-5806363)
chr1 (255-328)||(2632854-2632927)
chr1 (255-328)||(46666710-46666783)
chr1 (256-328)||(12190175-12190247)
chr1 (257-328)||(1597341-1597412)
chr1 (257-328)||(6978772-6978843)
chr1 (257-328)||(9115839-9115910)
chr1 (261-328)||(36361784-36361851)
chr1 (258-328)||(14788725-14788795)
chr1 (258-328)||(39930459-39930529)
chr1 (259-328)||(25789765-25789834)
chr1 (255-328)||(47037459-47037532)
chr1 (257-328)||(8332016-8332087)
chr1 (257-328)||(39329610-39329681)
chr1 (257-328)||(52630775-52630846)
chr1 (258-328)||(20260086-20260156)
chr1 (255-328)||(9831867-9831940)
chr1 (256-328)||(38964677-38964749)
chr1 (253-328)||(5518499-5518574)
chr1 (255-328)||(4683371-4683444)
chr1 (260-328)||(32824924-32824992)
chr1 (256-320)||(35187466-35187530)
chr1 (254-321)||(32202327-32202394)
chr1 (261-328)||(51445083-51445150)
chr1 (255-328)||(48916019-48916092)
chr1 (258-313)||(1007764-1007819)
chr1 (267-328)||(37436630-37436691)
chr1 (255-324)||(50190762-50190831)
chr1 (264-328)||(30241011-30241075)
chr1 (255-308)||(29091688-29091741)
chr1 (257-313)||(52699465-52699521)
[»] chr3 (22 HSPs)
chr3 (251-328)||(24574576-24574653)
chr3 (258-328)||(28124436-28124506)
chr3 (255-328)||(26849023-26849096)
chr3 (257-328)||(40908266-40908337)
chr3 (253-328)||(6231496-6231571)
chr3 (257-328)||(11239119-11239190)
chr3 (257-328)||(44952309-44952380)
chr3 (254-328)||(8476304-8476378)
chr3 (257-328)||(20297794-20297865)
chr3 (258-328)||(9320448-9320518)
chr3 (254-328)||(20414461-20414535)
chr3 (262-328)||(33217917-33217983)
chr3 (258-328)||(47114857-47114927)
chr3 (257-328)||(43132156-43132227)
chr3 (260-328)||(1099199-1099267)
chr3 (257-328)||(31435922-31435993)
chr3 (261-328)||(48339760-48339827)
chr3 (257-320)||(43715307-43715370)
chr3 (255-304)||(29512704-29512753)
chr3 (285-324)||(9320407-9320446)
chr3 (277-328)||(31611004-31611055)
chr3 (256-309)||(45826796-45826849)
[»] chr5 (19 HSPs)
chr5 (254-328)||(4765556-4765630)
chr5 (255-328)||(12970527-12970600)
chr5 (257-328)||(19065504-19065575)
chr5 (254-328)||(18412210-18412284)
chr5 (256-328)||(27481358-27481430)
chr5 (257-328)||(22935911-22935982)
chr5 (257-328)||(28602556-28602627)
chr5 (255-328)||(555703-555776)
chr5 (255-328)||(14206818-14206891)
chr5 (254-328)||(29543011-29543085)
chr5 (258-328)||(36703875-36703945)
chr5 (261-328)||(11855658-11855725)
chr5 (262-328)||(6091716-6091782)
chr5 (264-325)||(8406898-8406959)
chr5 (260-320)||(32535946-32536006)
chr5 (257-309)||(42012178-42012230)
chr5 (279-328)||(8646412-8646461)
chr5 (260-313)||(20962606-20962659)
chr5 (260-309)||(26637045-26637094)
[»] chr4 (34 HSPs)
chr4 (254-328)||(35999691-35999765)
chr4 (258-328)||(48518891-48518961)
chr4 (257-328)||(27555415-27555486)
chr4 (257-328)||(39730292-39730363)
chr4 (257-328)||(45747795-45747866)
chr4 (255-328)||(25916032-25916103)
chr4 (254-328)||(40435905-40435979)
chr4 (255-328)||(48879330-48879403)
chr4 (252-328)||(27762893-27762969)
chr4 (258-328)||(13229989-13230059)
chr4 (255-328)||(6279918-6279991)
chr4 (255-328)||(23686792-23686865)
chr4 (257-328)||(41859046-41859117)
chr4 (257-328)||(45596273-45596344)
chr4 (258-328)||(34049597-34049667)
chr4 (255-328)||(39835304-39835377)
chr4 (257-328)||(18405233-18405304)
chr4 (257-328)||(25932446-25932517)
chr4 (257-328)||(42773953-42774024)
chr4 (257-328)||(43723269-43723340)
chr4 (257-320)||(55967999-55968062)
chr4 (262-328)||(27942748-27942814)
chr4 (254-328)||(41744216-41744290)
chr4 (259-328)||(47670367-47670436)
chr4 (260-328)||(18931758-18931826)
chr4 (257-328)||(936131-936202)
chr4 (258-325)||(32953531-32953598)
chr4 (257-320)||(39498838-39498901)
chr4 (257-320)||(39502177-39502240)
chr4 (251-313)||(30415922-30415984)
chr4 (262-315)||(34237424-34237477)
chr4 (253-328)||(50672903-50672975)
chr4 (263-328)||(10400810-10400875)
chr4 (270-328)||(8322250-8322308)
[»] scaffold0006 (1 HSPs)
scaffold0006 (251-328)||(201926-202003)
[»] chr6 (11 HSPs)
chr6 (255-328)||(7053567-7053640)
chr6 (257-328)||(14171014-14171085)
chr6 (255-328)||(2657701-2657774)
chr6 (255-328)||(8029334-8029407)
chr6 (258-328)||(1317019-1317089)
chr6 (261-328)||(18897922-18897989)
chr6 (253-325)||(7344078-7344150)
chr6 (265-328)||(16968926-16968989)
chr6 (257-328)||(6705764-6705835)
chr6 (252-309)||(3869525-3869582)
chr6 (258-291)||(10246222-10246255)
[»] chr2 (35 HSPs)
chr2 (255-328)||(346342-346415)
chr2 (255-328)||(39995128-39995201)
chr2 (255-328)||(6171792-6171865)
chr2 (255-328)||(11071606-11071679)
chr2 (251-328)||(37533953-37534030)
chr2 (252-328)||(42674655-42674731)
chr2 (257-328)||(21737399-21737470)
chr2 (257-328)||(41729129-41729200)
chr2 (258-328)||(9733846-9733916)
chr2 (254-328)||(14777494-14777568)
chr2 (256-328)||(5770108-5770180)
chr2 (257-328)||(34356699-34356770)
chr2 (257-328)||(40950858-40950929)
chr2 (255-328)||(2050867-2050940)
chr2 (255-328)||(2521676-2521749)
chr2 (260-328)||(37192523-37192591)
chr2 (257-328)||(4559560-4559631)
chr2 (257-328)||(20426482-20426553)
chr2 (255-313)||(13760961-13761019)
chr2 (262-328)||(28311701-28311767)
chr2 (259-328)||(41750530-41750599)
chr2 (255-328)||(45409251-45409324)
chr2 (257-328)||(17965984-17966055)
chr2 (262-328)||(638594-638660)
chr2 (262-328)||(37233430-37233496)
chr2 (255-328)||(27357960-27358033)
chr2 (254-328)||(6571688-6571762)
chr2 (263-325)||(26310273-26310335)
chr2 (262-328)||(14832811-14832877)
chr2 (254-304)||(40570045-40570095)
chr2 (273-328)||(14253523-14253578)
chr2 (261-328)||(18713660-18713727)
chr2 (258-328)||(1988312-1988382)
chr2 (257-307)||(7007595-7007645)
chr2 (260-328)||(11763374-11763441)
[»] chr7 (35 HSPs)
chr7 (256-328)||(25098070-25098142)
chr7 (257-328)||(9946989-9947060)
chr7 (257-328)||(33378843-33378914)
chr7 (253-328)||(39554184-39554259)
chr7 (257-328)||(48314123-48314194)
chr7 (258-328)||(40212890-40212960)
chr7 (255-328)||(8419586-8419659)
chr7 (259-328)||(45265049-45265118)
chr7 (256-328)||(27213853-27213925)
chr7 (257-328)||(11329994-11330065)
chr7 (257-328)||(27248294-27248365)
chr7 (257-328)||(45045627-45045698)
chr7 (257-328)||(48160590-48160661)
chr7 (261-328)||(48341363-48341430)
chr7 (258-328)||(38544195-38544265)
chr7 (262-328)||(45448943-45449009)
chr7 (255-328)||(25924634-25924707)
chr7 (255-328)||(27419221-27419294)
chr7 (259-328)||(43949246-43949315)
chr7 (257-320)||(9814217-9814280)
chr7 (257-328)||(35488188-35488259)
chr7 (262-328)||(38396370-38396436)
chr7 (258-328)||(44566046-44566116)
chr7 (259-328)||(41632365-41632434)
chr7 (257-328)||(16825353-16825424)
chr7 (257-328)||(28904185-28904256)
chr7 (259-328)||(34930466-34930536)
chr7 (259-325)||(45723211-45723277)
chr7 (248-309)||(18824166-18824227)
chr7 (260-315)||(44820268-44820323)
chr7 (257-328)||(25045617-25045687)
chr7 (253-324)||(31921743-31921813)
chr7 (258-304)||(45440933-45440979)
chr7 (260-328)||(6656226-6656294)
chr7 (257-309)||(41684021-41684073)
[»] chr8 (25 HSPs)
chr8 (258-328)||(18298113-18298183)
chr8 (258-328)||(18726619-18726689)
chr8 (254-328)||(26062145-26062219)
chr8 (255-328)||(32660930-32661003)
chr8 (257-328)||(1554353-1554424)
chr8 (257-328)||(12710646-12710717)
chr8 (257-328)||(25837912-25837983)
chr8 (257-328)||(35818423-35818494)
chr8 (257-328)||(37392545-37392616)
chr8 (257-328)||(38132736-38132807)
chr8 (257-328)||(38364082-38364153)
chr8 (255-328)||(26601935-26602008)
chr8 (264-328)||(3050010-3050074)
chr8 (257-328)||(16313506-16313577)
chr8 (258-328)||(10896217-10896287)
chr8 (259-329)||(42755867-42755937)
chr8 (257-324)||(41228713-41228780)
chr8 (253-328)||(7317374-7317449)
chr8 (262-320)||(7931248-7931306)
chr8 (258-320)||(40197076-40197138)
chr8 (260-311)||(5020492-5020543)
chr8 (257-328)||(35394391-35394462)
chr8 (259-308)||(33444627-33444676)
chr8 (255-291)||(8635672-8635708)
chr8 (260-328)||(21137134-21137202)
[»] scaffold0189 (1 HSPs)
scaffold0189 (263-328)||(28957-29022)


Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 8116257 - 8116002
Alignment:
Q  1 atttgacggtgacaatgaaagtctttaaaataagagaaaggctgcttaggatagctgatttcagtttctagttcttaataagtgtaaattagtcattatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  8116257 atttgacggtgacaatgaaagtctttaaaataagagaaaggctgcttaggatagctgatttcagtttctagttattaataagt--aaattagtcattatt 8116160  T
Q  101 aattaattatttttagagaatttaaaacggttattaaaccaatccgtttctctttaaatcaatttgctttaatctatggaacttagttgagtttgcaaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116159 aattaattatttttagagaatttaaaacggttattaaaccaatccgtttctctttaaatcaatttgctttaatctatggaacttagttgagtttgcaaag 8116060  T
Q  201 aggaggttcgataaaccggacggagatgtgtggagcggaccacgagctccaaactaag 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8116059 aggaggttcgataaaccggacggagatgtgtggagcggaccacgagctccaaactaag 8116002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 3572560 - 3572635
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  3572560 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 3572635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 6911569 - 6911495
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  6911569 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatgtt 6911495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 2430569 - 2430498
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  2430569 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 2430498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 49822916 - 49822987
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  49822916 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatgtt 49822987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 5806285 - 5806363
Alignment:
Q  252 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgttac 330  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||| ||||||    
T  5806285 aactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctttgttac 5806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 2632927 - 2632854
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||||||    
T  2632927 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatgtt 2632854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 46666783 - 46666710
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  46666783 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 46666710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 12190175 - 12190247
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||    
T  12190175 aagggtgtgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtacatgcctatgtt 12190247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 1597341 - 1597412
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||    
T  1597341 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtt 1597412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 6978843 - 6978772
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  6978843 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 6978772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 9115910 - 9115839
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  9115910 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 9115839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 36361851 - 36361784
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 36361784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 14788795 - 14788725
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||    
T  14788795 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaataataggaatgtatatgtctatgtt 14788725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 39930529 - 39930459
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  39930529 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 39930459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 25789834 - 25789765
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  25789834 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 25789765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 47037532 - 47037459
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| | ||||||||||||    
T  47037532 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatgtt 47037459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 8332087 - 8332016
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||||||    
T  8332087 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtt 8332016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 39329681 - 39329610
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||| |||||||    
T  39329681 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgtctatgtt 39329610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 52630846 - 52630775
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||| |||||||    
T  52630846 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatgtt 52630775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 20260086 - 20260156
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||| ||||||||||||    
T  20260086 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatgtt 20260156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 9831867 - 9831940
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||| ||||||||||||    
T  9831867 taagtgtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatgtt 9831940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 38964677 - 38964749
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  38964677 aagggggtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatgtt 38964749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 5518499 - 5518574
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||||||| ||| | ||||||||||||    
T  5518499 actaagggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatgtt 5518574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 4683371 - 4683444
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||| |||||||||| |||||||| ||||||| | | ||||||||||||||||||| ||||||||||||    
T  4683371 taagggtgtctttgtttcaatttataattgttgattcccagaaataaaatgataggaatgtatatgcctatgtt 4683444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 32824992 - 32824924
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||| |||||||||| ||||||||||||    
T  32824992 gtgtgtttgtttcaagttataattgttgatttccggaaataaaataataggaatgtatatgcctatgtt 32824924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 35187530 - 35187466
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||    
T  35187530 aagggtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatg 35187466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 32202327 - 32202394
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgc 321  Q
    |||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||| |||||    
T  32202327 ctaagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgc 32202394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 51445083 - 51445150
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||| ||| ||||||||    
T  51445083 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatgtt 51445150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 48916019 - 48916092
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||| |||||||||||| || |||||||  | |||||||||||||| ||||| ||||||||||||    
T  48916019 taagggtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatgtt 48916092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 1007819 - 1007764
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 313  Q
    ||||||||||||||||||||||| || ||||||| || ||||||||||||| ||||    
T  1007819 gggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgatatgaat 1007764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 37436630 - 37436691
Alignment:
Q  267 tgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||| |||||| || ||||||| || |||||||||||||||||||| ||||| ||||||    
T  37436630 tgtttcatgttatatttgttgattcacgagaataaaatgataggaatgtatatgcatatgtt 37436691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 50190762 - 50190831
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgccta 324  Q
    |||| |||||||||||||||| ||||||| || |||  ||| ||||||||| ||||||||| ||||||||    
T  50190762 taagagtgtgtttgtttcaagatataattgttaatttccggaaataaaatgctaggaatgtatatgccta 50190831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 30241075 - 30241011
Alignment:
Q  264 gtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||| || |||||| | || ||||||||||||| ||| | ||||||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatgtt 30241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 29091741 - 29091688
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgata 308  Q
    |||||||||||||||||||||||||| || |||||||  |  ||||||||||||    
T  29091741 taagggtgtgtttgtttcaagttatatttgttgattcctgataataaaatgata 29091688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 52699465 - 52699521
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 313  Q
    |||||| ||||||||||||||||| |  | |||||  ||||||||||||||||||||    
T  52699465 agggtgcgtttgtttcaagttatattcgtagattcctgggaataaaatgataggaat 52699521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 24574653 - 24574576
Alignment:
Q  251 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  24574653 aaactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 24574576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 28124436 - 28124506
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  28124436 gggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatgtt 28124506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 26849096 - 26849023
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  26849096 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 26849023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 40908337 - 40908266
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  40908337 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 40908266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 6231496 - 6231571
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6231496 actaggggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatgtt 6231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 11239119 - 11239190
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  11239119 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 11239190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 44952380 - 44952309
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  44952380 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 44952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 8476304 - 8476378
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  8476304 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctgtgtt 8476378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 20297865 - 20297794
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||||||||||    
T  20297865 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatgtt 20297794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 9320448 - 9320518
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| | ||||||    
T  9320448 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacttatgtt 9320518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 20414461 - 20414535
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| ||||||   |||||||||||||| ||||||| ||||||||||||    
T  20414461 ctaagggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatgtt 20414535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 33217917 - 33217983
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||    
T  33217917 gtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtt 33217983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 47114857 - 47114927
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||| ||||||||||||    
T  47114857 gggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatgtt 47114927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 43132156 - 43132227
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||| |||||||| | ||||||||||||    
T  43132156 agggtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatgtt 43132227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 1099267 - 1099199
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||| ||| ||||||||    
T  1099267 gtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatgtt 1099199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 31435922 - 31435993
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| || |||||||  | |||||||||||||| ||||| ||||||||||||    
T  31435922 agggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatgtt 31435993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 48339760 - 48339827
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||  ||||| ||||||||||||    
T  48339760 tgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatgtt 48339827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 43715307 - 43715370
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    ||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||| ||||    
T  43715307 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatg 43715370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 29512753 - 29512704
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaat 304  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||    
T  29512753 taagggtgtgtttgtttcaagttataatttttaatttctgggaataaaat 29512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 9320407 - 9320446
Alignment:
Q  285 ttgattctcgggaataaaatgataggaatgtttatgccta 324  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  9320407 ttgattctcgggaataaaatgataggaatgtatataccta 9320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 31611004 - 31611055
Alignment:
Q  277 tataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||| ||||||| ||||||||||||||| ||||||| |||| |||||||    
T  31611004 tataattgttgattcccgggaataaaatgattggaatgtatatgtctatgtt 31611055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 45826849 - 45826796
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 309  Q
    ||||||||||||||||||||||||  || | |||||  ||||||||||||||||    
T  45826849 aagggtgtgtttgtttcaagttatcgttgtagattccagggaataaaatgatag 45826796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 4765556 - 4765630
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  4765556 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 4765630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 12970527 - 12970600
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  12970527 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 12970600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 19065504 - 19065575
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  19065504 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 19065575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 18412284 - 18412210
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  18412284 ctaagggtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatgtt 18412210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 27481430 - 27481358
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||| ||||||||||||    
T  27481430 aagggtgtgtttgtttcaagttataatttttgatttttggaaataaaatgataggaatgtatatgcctatgtt 27481358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 22935911 - 22935982
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  22935911 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 22935982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 28602627 - 28602556
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  28602627 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 28602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 555703 - 555776
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||| |||||||    
T  555703 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtt 555776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 14206818 - 14206891
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||||||    
T  14206818 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatgtt 14206891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 29543011 - 29543085
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||| |||| |||||||    
T  29543011 ctaagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgtctatgtt 29543085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 36703945 - 36703875
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||| |||||||    
T  36703945 gggtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatgtt 36703875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 11855658 - 11855725
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||||||||||| ||||||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatgtt 11855725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 6091782 - 6091716
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||  ||||| ||||||||||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatgtt 6091716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8406959 - 8406898
Alignment:
Q  264 gtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 325  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||  ||||||||    
T  8406959 gtttgtttcaagttataattgttgattttcgagaataaaatgataggaatgtacatgcctat 8406898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 32536006 - 32535946
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    |||||||||||| ||||||||||| ||||||| | ||||||||||||||| ||||| ||||    
T  32536006 gtgtgtttgttttaagttataattgttgattcccaggaataaaatgatagaaatgtatatg 32535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 42012178 - 42012230
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 309  Q
    ||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  42012178 agggtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgatag 42012230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 328
Target Start/End: Original strand, 8646412 - 8646461
Alignment:
Q  279 taatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  8646412 taattgttgattcccgggaataaaatgataggaatgtatatgtctatgtt 8646461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 20962659 - 20962606
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 313  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||    
T  20962659 gtgtgtttgtttcaagttatattcgtagattcttgggaataaaatgataggaat 20962606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 26637045 - 26637094
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 309  Q
    ||||||||||||||||||||| || ||||||   ||||||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaatgatag 26637094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 35999765 - 35999691
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  35999765 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatgtt 35999691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 48518891 - 48518961
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  48518891 gggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatgtt 48518961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 27555486 - 27555415
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  27555486 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatgtt 27555415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 39730292 - 39730363
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  39730292 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatgtatatgtctatgtt 39730363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 45747795 - 45747866
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  45747795 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 45747866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 25916032 - 25916103
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  25916032 taagggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatg--tatgcctatgtt 25916103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 40435979 - 40435905
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  40435979 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 40435905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 48879403 - 48879330
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  48879403 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 48879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 27762893 - 27762969
Alignment:
Q  252 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  27762893 aactatgggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 27762969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 13229989 - 13230059
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||    
T  13229989 gggtgtgtttgtttcaagttataattttttattcccgggaataaaatgatagaaatgtatatgcctatgtt 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 6279918 - 6279991
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||| |||||||    
T  6279918 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatatgaatgtatatgtctatgtt 6279991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 23686865 - 23686792
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| | ||||||||||||    
T  23686865 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatgtt 23686792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 41859046 - 41859117
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||||||    
T  41859046 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtt 41859117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 45596344 - 45596273
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||||||    
T  45596344 agggtgcgtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatgtt 45596273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 34049597 - 34049667
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||||    
T  34049597 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatgtt 34049667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 39835304 - 39835377
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||| ||||| ||||||    
T  39835304 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatgtt 39835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 18405233 - 18405304
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||||| |||| ||||| ||||||||||||    
T  18405233 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatgtt 18405304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 25932517 - 25932446
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||| ||||||||||||    
T  25932517 agggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatgtt 25932446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 42774024 - 42773953
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||   |||||||||||||| ||||||| ||||||||||||    
T  42774024 agggtgtgtttgtttcaagttataattgttgatttctgggaataaaatgattggaatgtatatgcctatgtt 42773953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 43723340 - 43723269
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||| ||||||||||||    
T  43723340 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatgtt 43723269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 55967999 - 55968062
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||    
T  55967999 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatg 55968062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 27942814 - 27942748
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||||    
T  27942814 gtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgtctatgtt 27942748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 41744216 - 41744290
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| |||||||| ||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||||||    
T  41744216 ctaagagtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatgtt 41744290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 47670436 - 47670367
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||| |||||||  || ||||||||||||| ||||| ||||||||||||    
T  47670436 ggtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatgtt 47670367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 18931826 - 18931758
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| ||||||   |||||||||||||||||||||| |||| |||||||    
T  18931826 gtgtgtttgtttcaagttataattgttgatttctgggaataaaatgataggaatgtatatgtctatgtt 18931758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 936202 - 936131
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||||| ||||| | ||| ||||||||    
T  936202 agggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgattggaatatatatccctatgtt 936131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 32953598 - 32953531
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 325  Q
    |||||||||||| ||||||||||||| ||||||| | |||| |||||||||||||||| |||||||||    
T  32953598 gggtgtgtttgtctcaagttataattgttgattcccaggaacaaaatgataggaatgtatatgcctat 32953531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 39498901 - 39498838
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||    
T  39498901 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 39502240 - 39502177
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||    
T  39502240 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 39502177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 30415984 - 30415922
Alignment:
Q  251 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 313  Q
    |||||||||||||||||||||||||||||| || ||||||| ||  |||||||||||||||||    
T  30415984 aaactaagggtgtgtttgtttcaagttatatttgttgattcccgataataaaatgataggaat 30415922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 34237424 - 34237477
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 315  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  34237424 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgt 34237477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 50672903 - 50672975
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||| ||||||  ||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  50672903 actaagggtgtgtttgttttaagtta--attgttgattc-cgggaataaaatgataggaatgtatatgtctatgtt 50672975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 10400810 - 10400875
Alignment:
Q  263 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||| || |||||| | |||||||||||||||| ||||| |||| |||||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatgtt 10400875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 328
Target Start/End: Complemental strand, 8322308 - 8322250
Alignment:
Q  270 ttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||| |||||||  |||||||||||||||| ||||| |||| |||||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatgtt 8322250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 202003 - 201926
Alignment:
Q  251 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  202003 aaacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 201926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 9e-27; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 7053567 - 7053640
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  7053567 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 7053640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 14171085 - 14171014
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  14171085 agggtgtgtttgtttcaagttataatttttgattcccgggaataaaatgataggaatctatatgcctatgtt 14171014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 2657774 - 2657701
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||||||    
T  2657774 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatacctatgtt 2657701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 8029407 - 8029334
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  8029407 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 8029334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 1317089 - 1317019
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  1317089 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 1317019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 18897989 - 18897922
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||| ||||||||||||    
T  18897989 tgtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatgtt 18897922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 7344078 - 7344150
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 325  Q
    |||||||||||||| ||||||| |||||||| |  |||  || |||||||||||||||||||| |||||||||    
T  7344078 actaagggtgtgttcgtttcaaattataattgtaaatttccgagaataaaatgataggaatgtatatgcctat 7344150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 16968989 - 16968926
Alignment:
Q  265 tttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||| |||||||  | |||||||||||||||||| | |||| |||||||    
T  16968989 tttgtttcaagttataattgttgattcctgagaataaaatgataggaatctatatgtctatgtt 16968926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 6705764 - 6705835
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| || |||||||   ||||||||||| ||| ||| | |||| |||||||    
T  6705764 agggtgtgtttgtttcaagttatatttgttgattcattggaataaaatggtagaaatatatatgtctatgtt 6705835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 3869582 - 3869525
Alignment:
Q  252 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 309  Q
    ||||||||||||||||||||||||||||  || | ||||   ||||||||||||||||    
T  3869582 aactaagggtgtgtttgtttcaagttatttttgtagatttctgggaataaaatgatag 3869525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 10246222 - 10246255
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattc 291  Q
    |||||||||||||||||||||||||| |||||||    
T  10246222 gggtgtgtttgtttcaagttataattgttgattc 10246255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 9e-27; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 346342 - 346415
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  346342 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 346415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 39995128 - 39995201
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  39995128 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 39995201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 6171865 - 6171792
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6171865 taagggtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatgcctatgtt 6171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 11071679 - 11071606
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||    
T  11071679 taagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgcctatgtt 11071606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 37534030 - 37533953
Alignment:
Q  251 aaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||| |||||||    
T  37534030 aaactaagggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatgtctatgtt 37533953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 42674655 - 42674731
Alignment:
Q  252 aactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  42674655 aacttagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 42674731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 21737399 - 21737470
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  21737399 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtt 21737470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 41729129 - 41729200
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||||||||||    
T  41729129 agggtgtgtttgtttcaagttataattttttattcccgggaataaaatgataggaatggatatgcctatgtt 41729200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 9733846 - 9733916
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  9733846 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 9733916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 328
Target Start/End: Original strand, 14777494 - 14777568
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  14777494 ctaagggtgtgtttgtttcaatttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 14777568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 5770108 - 5770180
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  5770108 aagggtatgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatgtt 5770180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 34356699 - 34356770
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||| |||||||    
T  34356699 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtt 34356770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 40950858 - 40950929
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||| ||||||    
T  40950858 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatgtt 40950929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 2050940 - 2050867
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||| ||||||||    
T  2050940 taagtgtgtgtttgtttcaagttataattgttgattcccgagaataaaatgataggaatgtatatacctatgtt 2050867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 2521749 - 2521676
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||  ||||||||||| ||||||| ||||||||||||    
T  2521749 taagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgattggaatgtatatgcctatgtt 2521676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 37192591 - 37192523
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||| |||||||    
T  37192591 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatgtt 37192523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 4559631 - 4559560
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| |  |||||||||||| ||||||| ||||||||||||    
T  4559631 agggtgtgtttgtttcaagttataattgttgattcccaagaataaaatgattggaatgtatatgcctatgtt 4559560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 20426482 - 20426553
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||| | ||||||||||||    
T  20426482 agggtgtgtttgtttcaaattatatttgttgattcccgggaataaaatgataggaatttatatgcctatgtt 20426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 13761019 - 13760961
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaat 313  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  13761019 taaggatgtgtttgtttcaagttataattattgattttcgggaataaaatgataggaat 13760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 28311701 - 28311767
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||||||| | ||||||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatgtt 28311767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 41750599 - 41750530
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||| |||||||   ||||||||||||||| ||||| ||||||||||||    
T  41750599 ggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatgtt 41750530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 45409324 - 45409251
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| || ||||||| |  | |||||||||||||||||| ||||||||||||    
T  45409324 taagggtgtgtttgtttcaagttatatttgttgattcccaagtataaaatgataggaatgtatatgcctatgtt 45409251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 17966055 - 17965984
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||  ||||||||||| ||||||| |||| |||||||    
T  17966055 agggtgtgtttgtttcaagttataattgttgattcccgataataaaatgattggaatgtatatgtctatgtt 17965984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 638660 - 638594
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||| |||||||    
T  638660 gtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatgtt 638594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 37233496 - 37233430
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||||||  | ||||||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaacatatatgcctatgtt 37233430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 27357960 - 27358033
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| || ||||||| | || ||||||||||||| |||| |||| |||||||    
T  27357960 taagggtgtgtttgtttcaagttatatttgttgattcccaggtataaaatgatagggatgtatatgtctatgtt 27358033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 6571762 - 6571688
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||| ||||||| |||||||| || ||||||  ||| ||||||||||||||||| | ||||||||||||    
T  6571762 ctaagggtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatgtt 6571688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 26310335 - 26310273
Alignment:
Q  263 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 325  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||| |||| ||||    
T  26310335 tgtttgtttaaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctat 26310273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 14832877 - 14832811
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||| || |||||||   ||||||||||||||| ||| | ||||||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatgtt 14832811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 40570095 - 40570045
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaat 304  Q
    |||||||||||||||||||||||||||||| | |||||  |||||||||||    
T  40570095 ctaagggtgtgtttgtttcaagttataattgtagattcctgggaataaaat 40570045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 14253578 - 14253523
Alignment:
Q  273 aagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||| || ||||||||||||||||||||||||| ||| | |||| |||||||    
T  14253578 aagttatatttgttgattctcgggaataaaatgatagaaatatatatgtctatgtt 14253523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 18713660 - 18713727
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||| || |||||||  || ||||||||||||  ||| | ||||||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatgtt 18713727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 1988382 - 1988312
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||| |||||||| || ||||||   |||||||||||||||| ||| |  |||||||||||    
T  1988382 gggtgtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatgtt 1988312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 7007645 - 7007595
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgat 307  Q
    ||||||||||| |||||||||||| || |||||||| ||| ||||||||||    
T  7007645 agggtgtgtttatttcaagttatatttgttgattcttggggataaaatgat 7007595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 11763374 - 11763441
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||| |||||||||||| || ||| || |||||||| ||||||||||||| | |||| |||||||    
T  11763374 gtgtgttt-tttcaagttatatttgttgtttttcgggaatgaaatgataggaatatatatgtctatgtt 11763441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 25098142 - 25098070
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  25098142 aagggtgtgtttgtttcaagttataatttttgattttcgggaataaaatgataggaatgtatatgcccatgtt 25098070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 9946989 - 9947060
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  9946989 agggtgtgtttgtttaaagttataatttttgattcccgggaataaaatgataggaatgtatatgcctatgtt 9947060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 33378914 - 33378843
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  33378914 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 33378843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 39554259 - 39554184
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  39554259 actaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 39554184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 48314194 - 48314123
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  48314194 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 48314123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 40212960 - 40212890
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  40212960 gggtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatgtt 40212890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 8419586 - 8419659
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  8419586 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 8419659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 45265049 - 45265118
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  45265049 ggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatgtt 45265118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 27213853 - 27213925
Alignment:
Q  256 aagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  27213853 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 27213925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 11330065 - 11329994
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  11330065 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 11329994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 27248365 - 27248294
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  27248365 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 27248294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 45045698 - 45045627
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  45045698 agggtgtgtttgttttaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 45045627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 48160590 - 48160661
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  48160590 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtt 48160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 48341430 - 48341363
Alignment:
Q  261 tgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 48341363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 38544265 - 38544195
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||    
T  38544265 gggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgataggaatgtatatgcctatgtt 38544195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 45449009 - 45448943
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  45449009 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtagatgtctatgtt 45448943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 25924634 - 25924707
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  25924634 taagggtatgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 25924707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 27419221 - 27419294
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||| ||||||||||||    
T  27419221 taagggtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatgtt 27419294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 43949315 - 43949246
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  43949315 ggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 43949246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 9814217 - 9814280
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  9814217 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatg 9814280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 35488188 - 35488259
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||| ||||||||||||    
T  35488188 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgattggaatgtatatgcctatgtt 35488259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 38396370 - 38396436
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  38396370 gtgtttgttccaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtt 38396436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 44566116 - 44566046
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||| |||||||    
T  44566116 gggtgtgtttgtttcaagttataattgttgatttccggaaataaaatgataggaatgtatatgtctatgtt 44566046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 41632365 - 41632434
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||| |||||||  | |||||||||||||| ||||| ||||||||||||    
T  41632365 ggtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatgtt 41632434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 16825353 - 16825424
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| || ||||   ||||||||||||||| ||||| ||||||||||||    
T  16825353 agggtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatgtt 16825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 28904185 - 28904256
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||| ||||||||||| ||||||| || |||||||||||||| ||||| |||| |||||||    
T  28904185 agggtgtgtttgttttaagttataattgttgattcccgagaataaaatgatagaaatgtatatgtctatgtt 28904256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 34930466 - 34930536
Alignment:
Q  259 ggtgtgtttgtttcaa-gttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||||||||| ||||| ||||||||||||    
T  34930466 ggtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatgtt 34930536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 45723277 - 45723211
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctat 325  Q
    |||||||||||||||||||||| || ||||||| || |||||||||||||||||| | |||||||||    
T  45723277 ggtgtgtttgtttcaagttatatttgttgattcccgagaataaaatgataggaatatatatgcctat 45723211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 18824227 - 18824166
Alignment:
Q  248 tccaaactaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 309  Q
    |||||||||||||||||||||||||||||| || || |||||| | ||||||||||||||||    
T  18824227 tccaaactaagggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatag 18824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 44820323 - 44820268
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgt 315  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||| |||||    
T  44820323 gtgtgtttgtttcaagttataattgttgattttcaggaataaaatgatagaaatgt 44820268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 25045617 - 25045687
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||| || |||||||| ||| |||||| ||||||||| | ||||| ||||||    
T  25045617 agggtgtgtttgtttcaagttatatttgttgattct-ggggataaaaagataggaatatatatgcatatgtt 25045687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 31921743 - 31921813
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgccta 324  Q
    |||||||||||||||||||||||||||| || || ||| |||| ||||||||||||| ||| | ||||||||    
T  31921743 actaagggtgtgtttgtttcaagttatatttgttcatt-tcggaaataaaatgatagaaatatatatgccta 31921813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 45440979 - 45440933
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaat 304  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||    
T  45440979 gggtgtgtttgtttcaagttataattgtagattcttgggaataaaat 45440933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 6656226 - 6656294
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||| || |||||| | || |||||||||||| |||| | ||| ||||||||    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaatgatatgaatatatatacctatgtt 6656294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 41684021 - 41684073
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatag 309  Q
    |||||||||||||||||||||||| || |||||||  | |||||| |||||||    
T  41684021 agggtgtgtttgtttcaagttatatttgttgattcctgagaataatatgatag 41684073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 18298183 - 18298113
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18298183 gggtttgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtatatacctatgtt 18298113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 18726619 - 18726689
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  18726619 gggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 18726689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 26062219 - 26062145
Alignment:
Q  254 ctaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||    
T  26062219 ctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatgtt 26062145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 32660930 - 32661003
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  32660930 taagggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatgtt 32661003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 1554353 - 1554424
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||    
T  1554353 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgtctatgtt 1554424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 12710717 - 12710646
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||    
T  12710717 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatgtt 12710646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 25837983 - 25837912
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||    
T  25837983 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtacatgcctatgtt 25837912  T

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Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 35818423 - 35818494
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  35818423 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 35818494  T

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Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 37392545 - 37392616
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  37392545 agggtgtatttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 37392616  T

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Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 38132736 - 38132807
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||    
T  38132736 agggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatgtt 38132807  T

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Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 38364153 - 38364082
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  38364153 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgattggaatgtatatgcctatgtt 38364082  T

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Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 26601935 - 26602008
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  26601935 taaggatgtgtttgtttcaaattataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 26602008  T

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Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 3050074 - 3050010
Alignment:
Q  264 gtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  3050074 gtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatgtt 3050010  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 16313506 - 16313577
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||| ||||||||    
T  16313506 agggtgtgtttgtttcaagttataattgttgatttccgggaataaaatgataggaatgtatatacctatgtt 16313577  T

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Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 10896217 - 10896287
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||| ||||||||||||    
T  10896217 gggtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatgtt 10896287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 42755937 - 42755867
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtta 329  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||| |||||||||||||    
T  42755937 ggtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatgtta 42755867  T

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Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 41228713 - 41228780
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgccta 324  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||| ||||||||    
T  41228713 agggtgtgtttgtttcaagttataattgttaattcccgggaataaaatggtaggaatgtatatgccta 41228780  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 7317449 - 7317374
Alignment:
Q  253 actaagggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||||||||||||||||||| || |||||| ||   ||||||||||||||||| | ||||||||||||    
T  7317449 actaagggtgtgtttgtttcaagttatatttgttgattttcaaaaataaaatgataggaatatatatgcctatgtt 7317374  T

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Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 7931306 - 7931248
Alignment:
Q  262 gtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||| ||||| ||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatg 7931248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 40197076 - 40197138
Alignment:
Q  258 gggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatg 320  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||| ||||    
T  40197076 gggtatgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatg 40197138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 5020492 - 5020543
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgatagga 311  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||||||    
T  5020492 gtgtgtttgtttcaagttatatttgttgattcatgggaataaaatgatagga 5020543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 35394462 - 35394391
Alignment:
Q  257 agggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||| |||||||||||||||||| || ||||||| || ||||||||||| || ||| | |||| |||||||    
T  35394462 agggtttgtttgtttcaagttatatttattgattcacgagaataaaatgaaagaaatatatatgtctatgtt 35394391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 33444627 - 33444676
Alignment:
Q  259 ggtgtgtttgtttcaagttataatttttgattctcgggaataaaatgata 308  Q
    |||||||||||||||||||||| || |||||||  | |||||||||||||    
T  33444627 ggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgata 33444676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 8635708 - 8635672
Alignment:
Q  255 taagggtgtgtttgtttcaagttataatttttgattc 291  Q
    |||| |||||||||||||||||||||||| |||||||    
T  8635708 taagagtgtgtttgtttcaagttataattgttgattc 8635672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 21137134 - 21137202
Alignment:
Q  260 gtgtgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    |||||||||||| |||||||| || |||||||  | ||||||||| |||| ||| | ||||||||||||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatgtt 21137202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 28957 - 29022
Alignment:
Q  263 tgtttgtttcaagttataatttttgattctcgggaataaaatgataggaatgtttatgcctatgtt 328  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  28957 tgtttgtttcaagttataattgttgattttcgggaataaaatgataggaatgtatatgcctatgtt 29022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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