View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14969_low_28 (Length: 316)
Name: NF14969_low_28
Description: NF14969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14969_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 26316022 - 26316315
Alignment:
| Q |
1 |
gcgggtctagccaaacatgattgtagtctagattctagtctcaagattttaaattttctcctgcttttatttcgaatgtattattaacatatgatgttgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26316022 |
gcgggtctagccaaacatgattgtagtctagattctagtctcaagattttaaattttctcctgcttttatttcgaatgtattattaacatatgatgttgt |
26316121 |
T |
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| Q |
101 |
aatataaggtttttcctagaggnnnnnnnnnnnnnn-gttggggcatagccattttgtttcaccaaaagaaaagactgagtataatttccttaaaaaagg |
199 |
Q |
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|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26316122 |
aatataaggtttttcctagaggtttttagttttttttgttggggcatagcccttttgtttcaccaaaagaaaagactgagtataatttccttaaaaaagg |
26316221 |
T |
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| Q |
200 |
tgagtgtaaagataccaccttatatatttttctctatcaaaatgataatttataattgattagaactctttaatacccgcttgaagtgtcccca |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26316222 |
tgagtgtaaagataccaccttatatatttttctctatcaaaatgataatttataattgattagaactctttaatacccgcttgaagtgtcccca |
26316315 |
T |
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