View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1496_high_11 (Length: 250)
Name: NF1496_high_11
Description: NF1496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1496_high_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 41285651 - 41285900
Alignment:
| Q |
1 |
acaagacacaagactaagctaattgaatactggtttgaaggtatagttgaccttcgactgtagaattccctaaaatgtgccaaattttaataaattcagc |
100 |
Q |
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| T |
41285651 |
acaagacacaagactaagctaattgaatactagtttgaaggtatagttgaccttcgactgtagaattccctaaaatgtgccaaattttaataaattcagc |
41285750 |
T |
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| Q |
101 |
agctctttacaggtctcattacaggctaataatttgctttatggtaaagcatcgaatgtaactttcttgcaaatcaatctatgttgatttttaatgagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41285751 |
agctctttacaggtctcattacaggctaataatttgctttatggtaaagcatcgaatgtaactttcttgcaaatcaatctatgttgatttttaatgagtt |
41285850 |
T |
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| Q |
201 |
tggttgaataatgggttgttataataggaataacttctttcgaggttcat |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41285851 |
tggttgaataatgggttgttataataggaataacttctttcgaggttcat |
41285900 |
T |
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