View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14971_low_6 (Length: 285)
Name: NF14971_low_6
Description: NF14971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14971_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 12 - 271
Target Start/End: Complemental strand, 42028672 - 42028413
Alignment:
| Q |
12 |
aggaagaggaaagtctgcacactgagatgttttttactgacttaaatgcgtatcagaactgtgttagggcagcgagagggagttgtcaaatcaagaaaag |
111 |
Q |
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| T |
42028672 |
aggaagaggaaagtctgcacactgagatgttttttactgacttaaatgcgtatcagaactgtgttagggcagcgagagggagttgtcaaatcaagaaaag |
42028573 |
T |
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| Q |
112 |
taaaacttgcatgtttatctctttttcataaataataatattatatggtgttatggagaagctattatggagtttctatagttgcactgactgttgaatg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42028572 |
taaaacttgcatgtttatctctttttcataaataataatattatatggtgttatggagaagctattatggagtttctatagttgcactgactgttgaatg |
42028473 |
T |
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| Q |
212 |
aacgaggagccctaaggaaacggaagagagatagtgtgtttatttagggtttcgctggtg |
271 |
Q |
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| T |
42028472 |
agcgaggagccctaaggaaacggaagagagatagtgtgtttatttagggtttcactggtg |
42028413 |
T |
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