View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14971_low_8 (Length: 264)
Name: NF14971_low_8
Description: NF14971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14971_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 21 - 248
Target Start/End: Original strand, 44802278 - 44802495
Alignment:
| Q |
21 |
agcataagttacataactgtgtagtagatcttgattctgatactgatatctcctttaattttatttgacaacatcatgtcatttaacaaagttcatnnnn |
120 |
Q |
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| T |
44802278 |
agcataagttacataactgtgtagtagatcttcattctgatactgatatctcctttaattttatttgacaacatcatgtcatttaacaaagttcataaaa |
44802377 |
T |
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| Q |
121 |
nnngagttgatatattaaatcaaaactcatcttagaattttcatcaactagaaatgtgcatatatatataaagacaaccagttcaatttcatttcaattc |
220 |
Q |
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|||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
44802378 |
aaagagttg----attaaatcaaaactcaatttagaattttcatcaactagaaatgtgc------atataaagacaaccagttcaatttcatttcaattg |
44802467 |
T |
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| Q |
221 |
ataagatgctatttatgtatgatgctaa |
248 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
44802468 |
ataagatgctatttatgtatgatgctaa |
44802495 |
T |
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