View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14972_high_5 (Length: 316)

Name: NF14972_high_5
Description: NF14972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14972_high_5
NF14972_high_5
[»] chr6 (30 HSPs)
chr6 (33-174)||(32817949-32818090)
chr6 (182-300)||(4804445-4804563)
chr6 (182-304)||(13089709-13089831)
chr6 (183-300)||(12412634-12412751)
chr6 (182-300)||(17944159-17944277)
chr6 (182-300)||(21159329-21159447)
chr6 (182-300)||(1249108-1249224)
chr6 (182-300)||(7162081-7162199)
chr6 (182-304)||(27826531-27826653)
chr6 (182-300)||(227523-227642)
chr6 (177-257)||(32737897-32737977)
chr6 (33-143)||(14495904-14496014)
chr6 (174-300)||(13888474-13888601)
chr6 (217-300)||(24484876-24484959)
chr6 (183-266)||(1516168-1516250)
chr6 (183-266)||(1518257-1518339)
chr6 (186-293)||(7215816-7215923)
chr6 (240-300)||(29698160-29698220)
chr6 (185-300)||(2800574-2800689)
chr6 (224-304)||(32254033-32254113)
chr6 (183-257)||(1515503-1515576)
chr6 (190-300)||(30460817-30460930)
chr6 (217-300)||(2142288-2142371)
chr6 (183-293)||(17828530-17828639)
chr6 (190-247)||(28696624-28696680)
chr6 (259-304)||(2720366-2720411)
chr6 (217-289)||(7098190-7098263)
chr6 (217-289)||(7545645-7545718)
chr6 (186-242)||(29229149-29229204)
chr6 (228-294)||(12734413-12734478)
[»] chr5 (38 HSPs)
chr5 (182-300)||(35660569-35660687)
chr5 (176-304)||(18625375-18625503)
chr5 (182-300)||(37266728-37266846)
chr5 (182-300)||(11775790-11775908)
chr5 (182-304)||(13032111-13032233)
chr5 (186-300)||(4895699-4895813)
chr5 (182-300)||(32129577-32129695)
chr5 (182-300)||(14349800-14349918)
chr5 (177-300)||(34827189-34827312)
chr5 (182-300)||(40753122-40753240)
chr5 (177-300)||(39902412-39902535)
chr5 (194-300)||(8440943-8441049)
chr5 (183-293)||(29340999-29341108)
chr5 (182-292)||(43309113-43309223)
chr5 (33-112)||(38760751-38760830)
chr5 (183-294)||(3057419-3057529)
chr5 (202-300)||(3057135-3057232)
chr5 (217-300)||(36290599-36290682)
chr5 (239-300)||(4592797-4592858)
chr5 (185-294)||(18653364-18653472)
chr5 (218-290)||(27428877-27428949)
chr5 (183-300)||(32793371-32793487)
chr5 (217-300)||(41660103-41660186)
chr5 (224-304)||(2984392-2984472)
chr5 (217-304)||(3041302-3041390)
chr5 (254-300)||(28142807-28142853)
chr5 (183-293)||(31653039-31653148)
chr5 (230-294)||(43222129-43222193)
chr5 (183-293)||(31546490-31546599)
chr5 (185-242)||(9460599-9460655)
chr5 (177-300)||(10361970-10362092)
chr5 (1-32)||(26113648-26113679)
chr5 (184-294)||(35650321-35650430)
chr5 (205-250)||(1475638-1475683)
chr5 (227-300)||(17247403-17247476)
chr5 (228-294)||(32316509-32316571)
chr5 (230-294)||(9465746-9465810)
chr5 (134-174)||(38760835-38760875)
[»] chr2 (39 HSPs)
chr2 (182-300)||(35316822-35316940)
chr2 (182-304)||(13238674-13238796)
chr2 (182-300)||(28564889-28565007)
chr2 (182-300)||(23259447-23259565)
chr2 (182-300)||(11864874-11864984)
chr2 (182-266)||(45625039-45625123)
chr2 (183-297)||(2063353-2063467)
chr2 (217-300)||(374990-375073)
chr2 (217-304)||(8988848-8988935)
chr2 (217-300)||(23459841-23459924)
chr2 (186-300)||(4446860-4446974)
chr2 (184-257)||(40640709-40640783)
chr2 (224-292)||(30709115-30709183)
chr2 (202-300)||(21454476-21454572)
chr2 (183-293)||(38397085-38397194)
chr2 (183-300)||(19908777-19908892)
chr2 (189-293)||(36929720-36929823)
chr2 (190-293)||(15709772-15709874)
chr2 (185-304)||(30857642-30857760)
chr2 (217-289)||(13780506-13780579)
chr2 (204-289)||(19905889-19905973)
chr2 (183-300)||(35315499-35315615)
chr2 (183-300)||(36758823-36758939)
chr2 (217-300)||(29188650-29188734)
chr2 (39-118)||(32865457-32865536)
chr2 (190-293)||(35315257-35315359)
chr2 (183-257)||(38824065-38824140)
chr2 (217-289)||(3594865-3594938)
chr2 (217-289)||(40254144-40254217)
chr2 (182-218)||(32009935-32009971)
chr2 (1-33)||(38993395-38993427)
chr2 (184-294)||(373127-373236)
chr2 (33-95)||(20365730-20365792)
chr2 (185-251)||(22061433-22061498)
chr2 (224-289)||(41435205-41435271)
chr2 (252-304)||(10877696-10877748)
chr2 (221-289)||(28029834-28029901)
chr2 (224-300)||(31618769-31618845)
chr2 (183-235)||(36758675-36758726)
[»] chr7 (40 HSPs)
chr7 (177-304)||(9559009-9559136)
chr7 (176-300)||(21151149-21151273)
chr7 (33-174)||(46459420-46459561)
chr7 (38-174)||(43637918-43638054)
chr7 (182-300)||(16366515-16366633)
chr7 (182-304)||(18198249-18198371)
chr7 (182-301)||(4888463-4888582)
chr7 (182-300)||(45260387-45260505)
chr7 (182-300)||(44647959-44648079)
chr7 (182-300)||(12139323-12139442)
chr7 (182-300)||(47226036-47226152)
chr7 (189-300)||(7362565-7362676)
chr7 (186-304)||(25084690-25084810)
chr7 (183-304)||(33450499-33450621)
chr7 (183-304)||(47500243-47500365)
chr7 (33-153)||(41988520-41988640)
chr7 (186-304)||(34985909-34986028)
chr7 (186-304)||(989122-989239)
chr7 (183-300)||(39855775-39855891)
chr7 (196-304)||(32915949-32916056)
chr7 (182-255)||(47271108-47271180)
chr7 (217-300)||(47799895-47799978)
chr7 (186-294)||(29631051-29631156)
chr7 (190-294)||(33608845-33608949)
chr7 (227-294)||(46802336-46802403)
chr7 (217-300)||(30588532-30588615)
chr7 (224-289)||(19027685-19027751)
chr7 (224-289)||(20726885-20726951)
chr7 (217-299)||(28528549-28528631)
chr7 (217-289)||(14696752-14696825)
chr7 (217-300)||(19889029-19889112)
chr7 (230-304)||(32916162-32916236)
chr7 (183-304)||(7712329-7712449)
chr7 (217-289)||(30102501-30102574)
chr7 (217-282)||(35737128-35737193)
chr7 (224-272)||(29844316-29844364)
chr7 (217-292)||(47080433-47080509)
chr7 (259-304)||(11828946-11828991)
chr7 (230-294)||(676030-676094)
chr7 (242-294)||(23142567-23142619)
[»] chr4 (52 HSPs)
chr4 (177-300)||(19901873-19901996)
chr4 (182-300)||(34778418-34778536)
chr4 (182-300)||(56558276-56558394)
chr4 (182-310)||(33247090-33247218)
chr4 (177-300)||(3952125-3952248)
chr4 (182-307)||(12312435-12312561)
chr4 (177-300)||(5416421-5416543)
chr4 (182-300)||(5763122-5763240)
chr4 (182-300)||(23610639-23610757)
chr4 (176-300)||(18206994-18207118)
chr4 (190-300)||(30567898-30568008)
chr4 (182-296)||(24073617-24073731)
chr4 (182-300)||(33262512-33262630)
chr4 (182-300)||(38079680-38079798)
chr4 (182-300)||(39862514-39862632)
chr4 (34-173)||(50382516-50382654)
chr4 (182-266)||(12153185-12153269)
chr4 (183-300)||(47922327-47922445)
chr4 (177-266)||(52018794-52018883)
chr4 (185-304)||(1871270-1871388)
chr4 (183-293)||(23474115-23474224)
chr4 (217-299)||(56269071-56269153)
chr4 (195-304)||(47922052-47922157)
chr4 (176-246)||(33524313-33524383)
chr4 (218-300)||(56453816-56453898)
chr4 (187-294)||(34927488-34927596)
chr4 (217-300)||(5524444-5524527)
chr4 (217-300)||(37002246-37002329)
chr4 (217-294)||(36688183-36688260)
chr4 (217-300)||(42010114-42010197)
chr4 (205-294)||(26428971-26429061)
chr4 (248-300)||(31862246-31862298)
chr4 (185-293)||(13493276-13493385)
chr4 (217-299)||(1015849-1015931)
chr4 (254-300)||(12241440-12241486)
chr4 (183-300)||(48914480-48914596)
chr4 (230-300)||(48084533-48084603)
chr4 (217-289)||(17493010-17493083)
chr4 (217-289)||(32146510-32146583)
chr4 (183-300)||(36532623-36532738)
chr4 (217-289)||(46238974-46239047)
chr4 (185-294)||(50483520-50483628)
chr4 (217-289)||(53526096-53526169)
chr4 (217-289)||(55160365-55160438)
chr4 (224-289)||(25219003-25219070)
chr4 (232-292)||(40215455-40215515)
chr4 (185-248)||(33841768-33841830)
chr4 (30-88)||(23126827-23126885)
chr4 (238-300)||(25442190-25442252)
chr4 (217-266)||(5361457-5361506)
chr4 (224-304)||(28701836-28701916)
chr4 (25-66)||(44937659-44937700)
[»] chr8 (28 HSPs)
chr8 (182-304)||(28069712-28069834)
chr8 (177-300)||(30426624-30426747)
chr8 (176-300)||(10672468-10672590)
chr8 (182-298)||(36991355-36991471)
chr8 (182-304)||(44859129-44859249)
chr8 (182-300)||(40695208-40695325)
chr8 (182-299)||(10652577-10652694)
chr8 (183-304)||(45113263-45113385)
chr8 (214-304)||(24102009-24102099)
chr8 (186-300)||(41511259-41511373)
chr8 (182-300)||(28318856-28318980)
chr8 (182-239)||(5033310-5033367)
chr8 (183-300)||(37966405-37966520)
chr8 (217-300)||(26749543-26749626)
chr8 (183-300)||(6014191-6014309)
chr8 (227-299)||(34612562-34612634)
chr8 (202-300)||(42761710-42761808)
chr8 (213-266)||(12177572-12177625)
chr8 (213-266)||(12422000-12422053)
chr8 (217-300)||(1937149-1937233)
chr8 (190-293)||(18689495-18689597)
chr8 (231-273)||(5033108-5033150)
chr8 (217-289)||(17867654-17867727)
chr8 (227-294)||(21486926-21486993)
chr8 (218-293)||(24557177-24557252)
chr8 (230-300)||(6399921-6399991)
chr8 (230-300)||(30796275-30796344)
chr8 (224-294)||(36748494-36748563)
[»] scaffold0012 (1 HSPs)
scaffold0012 (182-300)||(208060-208178)
[»] chr3 (33 HSPs)
chr3 (176-304)||(43719901-43720029)
chr3 (177-300)||(19830386-19830509)
chr3 (177-300)||(2229980-2230103)
chr3 (177-300)||(27033648-27033771)
chr3 (177-300)||(34373828-34373951)
chr3 (186-300)||(46167390-46167504)
chr3 (196-300)||(34373559-34373663)
chr3 (182-290)||(40851781-40851889)
chr3 (182-281)||(24754673-24754772)
chr3 (182-281)||(24763670-24763769)
chr3 (183-304)||(48084812-48084934)
chr3 (202-300)||(12402963-12403061)
chr3 (195-300)||(550790-550894)
chr3 (50-150)||(8322728-8322828)
chr3 (217-300)||(31523663-31523746)
chr3 (194-300)||(566746-566852)
chr3 (217-300)||(42613077-42613160)
chr3 (217-300)||(49679265-49679348)
chr3 (177-230)||(24647905-24647958)
chr3 (224-304)||(40810357-40810438)
chr3 (185-293)||(10474402-10474509)
chr3 (184-292)||(28229365-28229472)
chr3 (183-293)||(29586340-29586449)
chr3 (183-264)||(33632855-33632935)
chr3 (228-300)||(1995441-1995513)
chr3 (228-293)||(54911658-54911723)
chr3 (228-292)||(25285843-25285907)
chr3 (30-107)||(46111000-46111073)
chr3 (194-304)||(44637935-44638044)
chr3 (236-294)||(48950613-48950671)
chr3 (183-293)||(51982547-51982656)
chr3 (185-257)||(30235418-30235489)
chr3 (230-294)||(33979937-33980001)
[»] scaffold0035 (1 HSPs)
scaffold0035 (182-304)||(16357-16479)
[»] chr1 (38 HSPs)
chr1 (182-304)||(50294023-50294145)
chr1 (182-300)||(50484383-50484501)
chr1 (182-300)||(12151764-12151882)
chr1 (182-304)||(48327114-48327235)
chr1 (177-304)||(23861907-23862037)
chr1 (33-173)||(46600822-46600962)
chr1 (30-173)||(46086133-46086276)
chr1 (178-300)||(40328275-40328394)
chr1 (182-252)||(12380837-12380907)
chr1 (182-252)||(12384904-12384974)
chr1 (183-304)||(18976265-18976386)
chr1 (177-282)||(7840634-7840739)
chr1 (193-304)||(24977233-24977343)
chr1 (182-257)||(45978045-45978120)
chr1 (186-292)||(32361271-32361377)
chr1 (236-300)||(12380924-12380988)
chr1 (236-300)||(12384991-12385055)
chr1 (217-300)||(30077639-30077722)
chr1 (190-300)||(39426207-39426317)
chr1 (217-300)||(52280034-52280117)
chr1 (39-118)||(5132101-5132180)
chr1 (231-294)||(24413291-24413354)
chr1 (39-118)||(31492373-31492452)
chr1 (183-245)||(1228501-1228563)
chr1 (218-304)||(5047377-5047463)
chr1 (183-293)||(32618805-32618913)
chr1 (194-247)||(30860741-30860794)
chr1 (228-300)||(26860056-26860128)
chr1 (217-289)||(6948825-6948899)
chr1 (227-294)||(32887785-32887852)
chr1 (217-289)||(18107316-18107389)
chr1 (242-293)||(7844992-7845043)
chr1 (255-294)||(23916089-23916128)
chr1 (254-300)||(46608409-46608455)
chr1 (39-144)||(4796163-4796268)
chr1 (217-294)||(46045690-46045767)
chr1 (228-300)||(26372249-26372321)
chr1 (227-299)||(33441531-33441603)
[»] scaffold0250 (1 HSPs)
scaffold0250 (182-304)||(7140-7266)
[»] scaffold0008 (1 HSPs)
scaffold0008 (177-297)||(9156-9276)
[»] scaffold0126 (1 HSPs)
scaffold0126 (183-300)||(22404-22520)
[»] scaffold0009 (1 HSPs)
scaffold0009 (183-300)||(6396-6513)
[»] scaffold0006 (1 HSPs)
scaffold0006 (182-257)||(73817-73892)
[»] scaffold0456 (1 HSPs)
scaffold0456 (182-266)||(13710-13795)
[»] scaffold0171 (1 HSPs)
scaffold0171 (227-300)||(17311-17384)
[»] scaffold0062 (1 HSPs)
scaffold0062 (190-293)||(58684-58786)
[»] scaffold0664 (1 HSPs)
scaffold0664 (217-289)||(4695-4768)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-33)||(28316-28348)


Alignment Details
Target: chr6 (Bit Score: 114; Significance: 8e-58; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 32817949 - 32818090
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaatt 132  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32817949 acactttgtttggttggagagaattagggaagagagagttagtgtagatagaaatagaggagaagtaccaaacttctcttgtttggatagcaaagaaatt 32818048  T
Q  133 gtgaagagagaataaaaataggtgagtcataccaccttttta 174  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  32818049 gtgaagagagaataaaaataggtgggtcctaccaccttttta 32818090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 4804563 - 4804445
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  4804563 gaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 4804464  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  4804463 catcattaattatatttta 4804445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 13089709 - 13089831
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||||    
T  13089709 gaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccac 13089808  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  13089809 catcattaattatattttatttt 13089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 12412751 - 12412634
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||||    
T  12412751 aagatcttctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccacc 12412652  T
Q  283 atcattaattatatttta 300  Q
    ||||||||||||||||||    
T  12412651 atcattaattatatttta 12412634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 17944277 - 17944159
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| || |||||||    
T  17944277 gaagatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccac 17944178  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  17944177 catcattaattatatttta 17944159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 21159329 - 21159447
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  21159329 gaagatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 21159428  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  21159429 catcattaattatatttta 21159447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 1249108 - 1249224
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||| ||||||||||||||| |||||||    
T  1249108 gaagatcctctccatttggcaaaataaatggagttttgtaagttggagagagacagaca--aaaaatagatggtgggtcctaccactaagtgggtcccac 1249205  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  1249206 catcattaattatatttta 1249224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 7162199 - 7162081
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||||||    
T  7162199 gaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccac 7162100  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  7162099 catcattaattatatttta 7162081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 27826653 - 27826531
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||| ||||||| || || |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  27826653 gaagatcctctccatttggtaaaataactgaagatttgcaaggttgagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 27826554  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  27826553 catcattaattatattttatttt 27826531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 227523 - 227642
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtccca 280  Q
    ||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| |||||||||||||||  |||||    
T  227523 gaagatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatccca 227622  T
Q  281 ccatcattaattatatttta 300  Q
     ||||||| ||||| |||||    
T  227623 tcatcattgattatttttta 227642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 32737977 - 32737897
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg 257  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  32737977 tgggtgaagatcctctccatttggcaaaataaatagagttttgcaggttggagagagatagacacaaaaaatagatggtgg 32737897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 14495904 - 14496014
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaatt 132  Q
    ||||| ||||| || | |||||||||| |||||| || ||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  14495904 acactatgtttcgtagaagagaattagagaagagagaattagcaaagagagaaatagaagagaagtatcacacttctcttgtttggatagcaaagaaatt 14496003  T
Q  133 gtgaagagaga 143  Q
    || ||||||||    
T  14496004 gtcaagagaga 14496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 13888474 - 13888601
Alignment:
Q  174 agttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagt 272  Q
    |||||||  ||||||||||| || ||  ||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||| |||||||| ||| |    
T  13888474 agttgggttaagatcctctcaatatgctaaaataaatagagttttgcaatttggagagagatatacacaaaataatagatggtggttcctaccattaact 13888573  T
Q  273 gagtcccaccatcattaattatatttta 300  Q
    | |||||| ||||||||||||| |||||    
T  13888574 gggtcccatcatcattaattatttttta 13888601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 24484959 - 24484876
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||||| ||||||||| |||||||||||||||||||| |||||    
T  24484959 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattatttttta 24484876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 1516168 - 1516250
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||||| || |||||||||||||||||| ||| ||||    
T  1516168 aagatcctatccatttggcaaaataaatggag-tttgcaatttggagagagatggatacaaaaaatagatggtggatcccacca 1516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 1518257 - 1518339
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||||| || |||||||||||||||||| ||| ||||    
T  1518257 aagatcctatccatttggcaaaataaatggag-tttgcaatttggagagagatggatacaaaaaatagatggtggatcccacca 1518339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 186 - 293
Target Start/End: Original strand, 7215816 - 7215923
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    ||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| ||||||||| |||| |||||||||||| || ||||||| |||    
T  7215816 atcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatc 7215915  T
Q  286 attaatta 293  Q
    ||||||||    
T  7215916 attaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 29698220 - 29698160
Alignment:
Q  240 acaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  29698220 acaaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatatttta 29698160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 2800574 - 2800689
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    |||||||||||||||  ||||| ||||||  |   ||| ||||||||||||||||||| ||||||||| |||| || ||||| |||||| ||||||||||    
T  2800574 gatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggtcccaccat 2800673  T
Q  285 cattaattatatttta 300  Q
    |||| ||||| |||||    
T  2800674 cattgattatttttta 2800689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 32254033 - 32254113
Alignment:
Q  224 ttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    |||||| |||||||||| |||||| || |||||| ||||| || |||||||||||||| |||||||||||| |||||||||    
T  32254033 ttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaattattttttatttt 32254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 1515503 - 1515576
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg 257  Q
    |||||||| || |||||||||||||||||||| ||||||| |||||||||||| || | ||||||||||||||||    
T  1515503 aagatcctatcaatttggcaaaataaatggag-tttgcaatttggagagagatggataaaaaaaatagatggtgg 1515576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 30460930 - 30460817
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg----ctcctaccactaagtgagtcccaccatc 285  Q
    |||||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||| ||| || |||     |||||||| ||| |||||||| || |     
T  30460930 tctccatttgacaaaataaatggag-tttgcaatttggagaaagatagacacaaaaagtagttgatggatccatcctaccattaaatgagtcccgccgtt 30460832  T
Q  286 attaattatatttta 300  Q
    |||||||||||||||    
T  30460831 attaattatatttta 30460817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 2142288 - 2142371
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||| | || || ||| || ||||||||||||||||| |||||    
T  2142288 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattatttttta 2142371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 17828530 - 17828639
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||| ||||||| | ||||| |||||| | |||| ||||||||||||||||||| ||||||||| |||| | |||| | ||||||  ||||| |    
T  17828530 aagatcctctacatttggtataataattggagtat-gcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatc 17828628  T
Q  283 atcattaatta 293  Q
    |||| ||||||    
T  17828629 atcaataatta 17828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 28696624 - 28696680
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 247  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||    
T  28696624 tctccatttggcaaaataaattgag-tttgcaatttggagagagatagacaaaaaaaa 28696680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 2720411 - 2720366
Alignment:
Q  259 tcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||    
T  2720411 tcctaccactaagtgggtcccaccatcattaattattttatatttt 2720366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 7098190 - 7098263
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||||| |||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  7098190 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 7098263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 7545718 - 7545645
Alignment:
Q  217 ttgcaagttggagagagatagaca-caaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||||| |||||||||  |||||| ||||| |||||||||  |||||| |||||||    
T  7545718 ttgcaatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaca 242  Q
    ||||||||||||||| | ||||||||||| | ||||| |||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatggag-tatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 12734478 - 12734413
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||| ||||||| |||||  |||  |||| |||||||||| |||||||||||||||||||    
T  12734478 agagagatagaaacaaaaactagataatgga-cctatcactaagtgaatcccaccatcattaattat 12734413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 35660569 - 35660687
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  35660569 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 35660668  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  35660669 catcattaattatatttta 35660687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 18625375 - 18625503
Alignment:
Q  176 ttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgag 275  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |    
T  18625375 ttgggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtggg 18625474  T
Q  276 tcccaccatcattaattatattttatttt 304  Q
    |||||||||||||||||||||||||||||    
T  18625475 tcccaccatcattaattatattttatttt 18625503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 37266846 - 37266728
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  37266846 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccac 37266747  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  37266746 catcattaattatatttta 37266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 11775908 - 11775790
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  11775908 gaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccac 11775809  T
Q  282 catcattaattatatttta 300  Q
    | |||||||||||||||||    
T  11775808 cgtcattaattatatttta 11775790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 13032233 - 13032111
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| || |||||||    
T  13032233 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccac 13032134  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  13032133 catcattaattatattttatttt 13032111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 4895699 - 4895813
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  286 attaattatatttta 300  Q
    |||||||||||||||    
T  4895799 attaattatatttta 4895813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 32129577 - 32129695
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  32129577 gaagatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccac 32129676  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  32129677 catcattaattatatttta 32129695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 14349918 - 14349800
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  14349918 gaagatcctctctatttggtaaaataaatggagttttgtaagttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 14349819  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  14349818 catcattaattatatttta 14349800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 34827312 - 34827189
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||    
T  34827312 tgggtgaagatcatctccatttagcaaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggt 34827213  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||| ||||||||||||||    
T  34827212 cccaccatctttaattatatttta 34827189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 40753122 - 40753240
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  40753122 gaagatcctctctatttggcaaaataaataaagttttgcaagttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccac 40753221  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  40753222 catcattaattatatttta 40753240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 39902535 - 39902412
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||  |    
T  39902535 tgggtgaagttcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggat 39902436  T
Q  277 cccaccatcattaattatatttta 300  Q
     |||||||||||||||||||||||    
T  39902435 tccaccatcattaattatatttta 39902412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 8440943 - 8441049
Alignment:
Q  194 catttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatta 293  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||   | |||||||||||| |||||||||||||||||||    
T  8440943 catttggcaaaataaatggagttttgcaagttggaggtagatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaatta 8441042  T
Q  294 tatttta 300  Q
    |||||||    
T  8441043 tatttta 8441049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 29341108 - 29340999
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||||||||||| | |||||||||||| | |||| ||||||||||||||||||| ||||||||| |||| |||||| | |||||| ||||||||    
T  29341108 aagatcctctccatttggtataataaatggagtat-gcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccacc 29341010  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  29341009 atcattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 292
Target Start/End: Complemental strand, 43309223 - 43309113
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||| ||| || || ||||    
T  43309223 gaagatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccac 43309124  T
Q  282 catcattaatt 292  Q
    |||||||||||    
T  43309123 catcattaatt 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 38760751 - 38760830
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctctt 112  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  38760751 acactctgtttagttggagagaattagagaagagagagttagtgaagagagaaatagaggagaagtatcgtacttctctt 38760830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 3057529 - 3057419
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||||||||| | ||||||||| ||||||| ||| | ||||||||||||||| |||||| ||||| ||| ||||||||| |||||||| ||| |    
T  3057529 aagatcctctccattttgtaaaataaatagagtttt-caattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagttccatc 3057431  T
Q  283 atcattaattat 294  Q
    ||||||||||||    
T  3057430 atcattaattat 3057419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 3057135 - 3057232
Alignment:
Q  202 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||| ||| |||| ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||| ||  ||||||||||||||||||    
T  3057135 aaaataaatggaattt-gcaatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatatttta 3057232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 36290682 - 36290599
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||||| |||||||||  ||||||||||||||||||| |||||    
T  36290682 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattatttttta 36290599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 4592858 - 4592797
Alignment:
Q  239 cacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatatttta 4592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 18653472 - 18653364
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    ||||||||| | ||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||  | |||||| |||||||||| ||||||    
T  18653472 gatcctctcaaattgtcaaaataaatggagttt-gcaatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtgagtctcaccat 18653374  T
Q  285 cattaattat 294  Q
     | |||||||    
T  18653373 taataattat 18653364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 27428877 - 27428949
Alignment:
Q  218 tgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaa 290  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||    
T  27428877 tgcaatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 32793487 - 32793371
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||| || |||| ||||||||||||||||||  ||| || |||||||||| |||||||||||||||| ||  || ||| |||||||  |||||||     
T  32793487 aagatcctatctatttagcaaaataaatggagttta-caatttagagagagatatacacaaaaaatagatgatgattcttactactaagtaggtcccaca 32793389  T
Q  283 atcattaattatatttta 300  Q
    ||||| ||||||||||||    
T  32793388 atcatcaattatatttta 32793371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 41660186 - 41660103
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||  | ||||| ||| |||||||||||||||||||| |||||    
T  41660186 ttgcaatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattatttttta 41660103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 2984392 - 2984472
Alignment:
Q  224 ttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||||||||||||||||| ||||||  || ||  ||||| |||||| || |||||||||||||||||||| |||||||||    
T  2984392 ttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattattttttatttt 2984472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 3041302 - 3041390
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaataga-tggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    |||||| ||||||||||||||| ||||||||   | |||||| ||||| ||||||| | |||||||||||||||||||| |||||||||    
T  3041302 ttgcaatttggagagagatagatacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttatttt 3041390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 28142807 - 28142853
Alignment:
Q  254 gtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||    
T  28142807 gtggatcctaccattaagtgagtcccaccatcattaattatatttta 28142853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 31653148 - 31653039
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||| ||||||||| | ||||||||| || | |||| ||||||||||||| ||||| ||||||||| | |  |||||| | |||||||||| |||     
T  31653148 aagatcctatccatttggtataataaatggcgtat-gcaatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcaca 31653050  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  31653049 atcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 43222193 - 43222129
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||||||||||||||||||||||||||| || || || ||| ||  |||||||||||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattat 43222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 31546599 - 31546490
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||| || |||||||||| |||||||||||| | |||| ||| |||||| |||||| | ||||||||||||||  ||||| | ||||||  ||||| |    
T  31546599 aagatcatccccatttggcataataaatggagtat-gcaatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatc 31546501  T
Q  283 atcattaatta 293  Q
    || ||||||||    
T  31546500 ataattaatta 31546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 9460599 - 9460655
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaca 242  Q
    |||||||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||    
T  9460599 gatcctctccatttggtaaaataaatagag-tatgcaatttggagagagatagacaca 9460655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 10361970 - 10362092
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| |||||||||||||||||   ||| ||||||||   | |||| | ||||||||||||| ||| ||||| | | |||| |||||||| |||||| ||    
T  10361970 tgggtgaagatcctctccatttataaaactaaatggaagat-gcaattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggt 10362068  T
Q  277 cccaccatcattaattatatttta 300  Q
    | |||| ||||||||||| |||||    
T  10362069 ctcaccgtcattaattatttttta 10362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26113679 - 26113648
Alignment:
Q  1 gaacgctgacccgtgcgccgcacgggtctttt 32  Q
    ||||||||||||||||||||||||||||||||    
T  26113679 gaacgctgacccgtgcgccgcacgggtctttt 26113648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 35650430 - 35650321
Alignment:
Q  184 agatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacca 283  Q
    |||||||||||||||   ||||||||||||| || |||| | | | | ||||||||||||||||||| |||||| |||||  | ||| ||| |  |||||    
T  35650430 agatcctctccatttattaaaataaatggagatt-gcaattagaaaaaagatagacacaaaaaataggtggtgggtcctattattaaatgaatttcacca 35650332  T
Q  284 tcattaattat 294  Q
    |||||||||||    
T  35650331 tcattaattat 35650321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 1475638 - 1475683
Alignment:
Q  205 ataaatggagttttgcaagttggagagagatagacacaaaaaatag 250  Q
    |||||||| |||||||||||| |||||| ||||| |||||||||||    
T  1475638 ataaatggtgttttgcaagtttgagagaaatagatacaaaaaatag 1475683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 17247476 - 17247403
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||| |||||||||| |||||| | ||| || |||||| || ||| ||| ||||||||| |||||    
T  17247476 gagagagatagacgcaaaaaataggtggtgggttctatcattaagtgcgttccatcataattaattatttttta 17247403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 32316509 - 32316571
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||||||||||| |||    ||| | ||||||||||||||||||||| ||||| ||||||    
T  32316509 agagagatagacacaaaaactag----tggattctaccactaagtgagtcccacaatcataaattat 32316571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 9465810 - 9465746
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||||| ||||||| |||||| ||||| || ||| ||| |  ||||||||||||||||    
T  9465810 agagatagacacataaaataggtggtggatcctatcattaaatgaatttcaccatcattaattat 9465746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 38760835 - 38760875
Alignment:
Q  134 tgaagagagaataaaaataggtgagtcataccaccttttta 174  Q
    ||||||||||||||||||||||| | | |||||||||||||    
T  38760835 tgaagagagaataaaaataggtgggccctaccaccttttta 38760875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 5e-56; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 35316940 - 35316822
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  35316940 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccac 35316841  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  35316840 catcattaattatatttta 35316822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 13238796 - 13238674
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  13238796 gaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccac 13238697  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  13238696 catcattaattatattttatttt 13238674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 28565007 - 28564889
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  28565007 gaagatcctctccatttggcaaaataaatggagttttttaagttgtagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 28564908  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  28564907 catcattaattatatttta 28564889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 23259447 - 23259565
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||  ||||||    
T  23259447 gaagatcctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccac 23259546  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  23259547 catcattaattatatttta 23259565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 11864984 - 11864874
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||        ||||||||| |||||| |||    
T  11864984 gaagatcctctccatttatcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatg--------taccactaaatgagtctcac 11864893  T
Q  282 catcattaattatatttta 300  Q
    ||||||  |||||||||||    
T  11864892 catcatggattatatttta 11864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 45625039 - 45625123
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || |||| ||| ||||    
T  45625039 gaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaagaaataaattgtgggtcccacca 45625123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 2063467 - 2063353
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatgg-tggctcctaccactaagtgagtcccac 281  Q
    |||||||||| |||||| |||||||||| |||||| |||| ||||||||||||||||||||||||||||||| | | ||||||||| ||||| || ||||    
T  2063467 aagatcctcttcatttgacaaaataaatagagttt-gcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggttccac 2063369  T
Q  282 catcattaattatatt 297  Q
    |||||||||| |||||    
T  2063368 catcattaataatatt 2063353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 375073 - 374990
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| |||||  |||||||| |||||||||||||||||||| |||||    
T  375073 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattatttttta 374990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 8988935 - 8988848
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    |||||| ||||||||||||||||||||||||||  || | | ||||| ||||||||| |||||||||||||||||||| |||||||||    
T  8988935 ttgcaatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttatttt 8988848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 23459841 - 23459924
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  ||| || ||||| |||||| || |||||||||||||||||||| |||||    
T  23459841 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattatttttta 23459924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 4446860 - 4446974
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    ||||||||||||||  ||||||||||||  | | ||| ||| ||||||||||||||| ||||||||| |||| |||||||||||| || ||  ||| |||    
T  4446860 atcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtttcactatc 4446959  T
Q  286 attaattatatttta 300  Q
    ||||||||| |||||    
T  4446960 attaattatttttta 4446974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 40640783 - 40640709
Alignment:
Q  184 agatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtgg 257  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||    
T  40640783 agatcctctccatttgttaaaataaatggagttttgcaatttggagagagatatatacaaaagaatagatggtgg 40640709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 30709183 - 30709115
Alignment:
Q  224 ttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatt 292  Q
    ||||||||||||||||||| |||||||||  ||| |||||||||||||||  |||||||||||||||||    
T  30709183 ttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcccaccatcattaatt 30709115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 21454476 - 21454572
Alignment:
Q  202 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||||||| | || || |||||||||||||||||||| ||||| |||| || ||||| |||||| || ||||||||||||||||| |||||    
T  21454476 aaaataaatggagttt-gtaatttagagagagatagacacaaaaa-tagattgtgggtcataccattaagtgggttccaccatcattaattatttttta 21454572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 38397194 - 38397085
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||||||||| | | |||||| ||||| | |||| ||| ||||||||||||| | ||||||||| |||| | |||| | |||||||||||||||    
T  38397194 aagatcctctccattttgtataataaacggagtat-gcaatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccacc 38397096  T
Q  283 atcattaatta 293  Q
    |||| ||||||    
T  38397095 atcaataatta 38397085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 19908892 - 19908777
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||| ||||||  | |||||||||||| | |||| |||||| |||||||||||| ||||||||| |||  ||||||   |||||| ||||||||    
T  19908892 aagatcctcttcatttgatataataaatggagtat-gcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtgggtcccacc 19908795  T
Q  283 atcattaattatatttta 300  Q
    |||||||||||| |||||    
T  19908794 atcattaattatttttta 19908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 36929823 - 36929720
Alignment:
Q  189 ctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatt 288  Q
    |||||||||| |||||||||||||||| | |||| ||||||||||||||||||| ||||||| | |||  |||||||| ||| ||  | || ||||||||    
T  36929823 ctctccatttagcaaaataaatggagtat-gcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcatt 36929725  T
Q  289 aatta 293  Q
    |||||    
T  36929724 aatta 36929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 15709874 - 15709772
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||| |||| |||||||||||||| | | |||| ||||||||||||| ||| | ||||||||| |||| |||||||| |||||| || ||| ||||||||    
T  15709874 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 15709776  T
Q  290 atta 293  Q
    ||||    
T  15709775 atta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 304
Target Start/End: Original strand, 30857642 - 30857760
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    ||||||||||||||  ||||||||||||||| | | || ||| |||||| ||||||||||||||||||  ||| |||||| | ||| ||  || ||||||    
T  30857642 gatcctctccatttcacaaaataaatggagtat-gtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcacaccat 30857740  T
Q  285 cattaattatattttatttt 304  Q
    |||||||||| || ||||||    
T  30857741 cattaattattttatatttt 30857760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 13780579 - 13780506
Alignment:
Q  217 ttgcaagttggagagagatagacacaa-aaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||||||||||||||||||| ||||||  |||||| ||||| |||||||||  ||||||||||||||    
T  13780579 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 13780506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 19905973 - 19905889
Alignment:
Q  204 aataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||||||||| | |||| || |||||||||||||||| ||||||||||||||  | ||  | ||||||||||||||||||||||    
T  19905973 aataaatggagtat-gcaattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 35315615 - 35315499
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||||||||||||||   ||||||||||||    ||||| ||||||||||||| ||||||| ||||| |||||| ||||| || |||||||||||  ||    
T  35315615 aagatcctctccatttataaaaataaatgga-agatgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtccttcc 35315517  T
Q  283 atcattaattatatttta 300  Q
    ||| |||| ||| |||||    
T  35315516 atcgttaactatttttta 35315499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 36758823 - 36758939
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||||||||||||||   ||||||||||||  || |||| ||||||||||||||||||||||| ||  |||||| ||||| |  || ||| || ||||     
T  36758823 aagatcctctccatttataaaaataaatggaagtt-gcaatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccaca 36758921  T
Q  283 atcattaattatatttta 300  Q
    |||||||||||| |||||    
T  36758922 atcattaattatttttta 36758939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 29188734 - 29188650
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaataga-tggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||   | |||||  ||||| ||||||| | |||||||||||||||||||| |||||    
T  29188734 ttgcaatttggagagagatagacacaaaaaaacaagtggtgcgtcctatcactaagcgggtcccaccatcattaattatttttta 29188650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 32865536 - 32865457
Alignment:
Q  39 tgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttgg 118  Q
    ||||| ||| ||||||| || | ||||| || |||  ||||||||||||||| |||||||| ||||||||||||||||||    
T  32865536 tgttttgtttgagagaaataagaaagagagatttaaagaagagagaaatagaagagaagtaacaaacttctcttgtttgg 32865457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 35315257 - 35315359
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    ||||||||||||| ||||| |||| | | |||| ||| ||||||||||||||| |||||||||  ||| || ||| | ||| ||||||||||||| ||||    
T  35315257 tctccatttggcataataagtggactat-gcaatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattatta 35315355  T
Q  290 atta 293  Q
    ||||    
T  35315356 atta 35315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 38824140 - 38824065
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtgg 257  Q
    |||||| |||| |||||  |||||||||||||||||| || ||||||||||||||||| |||| |||| |||||||    
T  38824140 aagatcatctctatttgctaaaataaatggagttttgtaatttggagagagatagacaaaaaagaataaatggtgg 38824065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 3594938 - 3594865
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||||| |||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  3594938 ttgcaatttggagagagatagacaaaaaaaaataagtggtggatcctatcactaagtggatcccaccatcatta 3594865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 40254144 - 40254217
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||| ||||||||||||||||| ||||  |||||| ||||| |||||||||  ||||||||||||||    
T  40254144 ttgcaatttggggagagatagacacaaaataataagtggtgggtcctatcactaagtggatcccaccatcatta 40254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 32009935 - 32009971
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagtttt 218  Q
    |||||||||||||||||| ||||||||||||||||||    
T  32009935 gaagatcctctccatttgacaaaataaatggagtttt 32009971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38993395 - 38993427
Alignment:
Q  1 gaacgctgacccgtgcgccgcacgggtctttta 33  Q
    |||||||||||||||||||||||||||||||||    
T  38993395 gaacgctgacccgtgcgccgcacgggtctttta 38993427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 373127 - 373236
Alignment:
Q  184 agatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacca 283  Q
    |||||||||||||||   ||||||||||||| || |||| |  || | ||||||||||||||||||| |||||| || ||  | ||| ||| ||||||||    
T  373127 agatcctctccatttataaaaataaatggagatt-gcaattatgaaaaagatagacacaaaaaataggtggtgggtcatattattaaatgaatcccacca 373225  T
Q  284 tcattaattat 294  Q
    | |||||||||    
T  373226 ttattaattat 373236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 20365730 - 20365792
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggaga 95  Q
    ||||||||||||||||||||||| || | | ||| ||||||  ||||||||||||||| ||||    
T  20365730 acactctgtttggttggagagaaataagaaggagagagttaaagaagagagaaatagaagaga 20365792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataga 251  Q
    ||||||||| ||||| ||||||||||| ||| | |||| ||| ||||||||||||||| ||||||||    
T  22061433 gatcctctcaatttgacaaaataaatgaagtat-gcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 41435205 - 41435271
Alignment:
Q  224 ttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||||||||||||||| ||||||||  |||||| ||||| |||||||||  ||||||||| ||||    
T  41435205 ttggagagagatagacacaaaaaaataagtggtggatcctatcactaagtggatcccaccattatta 41435271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 10877748 - 10877696
Alignment:
Q  252 tggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    |||||| ||||| || ||| ||| ||||||||||||||||||||||| |||||    
T  10877748 tggtggatcctatcattaaatgaatcccaccatcattaattatatttcatttt 10877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 28029901 - 28029834
Alignment:
Q  221 aagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||| |||||| | ||||||| ||||| |||||| ||| |||||| |||||||    
T  28029901 aagttgaagagagatagaca-aaaaaaaaaatggtggatcctatcactaaatgaatcccactatcatta 28029834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 31618769 - 31618845
Alignment:
Q  224 ttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||| ||||||| | | ||||||||| |||  || || || |||||||||||||| |||||||||||| |||||    
T  31618769 ttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagtcccacaatcattaattatttttta 31618845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 36758675 - 36758726
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagat 235  Q
    ||||||||||||||||| |||| ||||||||| | ||||| ||||||||||||    
T  36758675 aagatcctctccatttgtcaaagtaaatggag-tatgcaatttggagagagat 36758726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 9559009 - 9559136
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  9559009 tgggtgaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggt 9559108  T
Q  277 cccaccatcattaattatattttatttt 304  Q
    ||||||||||||||||||||||||||||    
T  9559109 cccaccatcattaattatattttatttt 9559136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 21151273 - 21151149
Alignment:
Q  176 ttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgag 275  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||| |    
T  21151273 ttgggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtggg 21151174  T
Q  276 tcccaccatcattaattatatttta 300  Q
    |||||||||||||||||||||||||    
T  21151173 tcccaccatcattaattatatttta 21151149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 46459420 - 46459561
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaatt 132  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||    
T  46459420 acactctgtttgattggagagaattagagaagagagagttagtgaagagagaaatagagaagaagtatcatacttctcttgtttggatggcaaagaactt 46459519  T
Q  133 gtgaagagagaataaaaataggtgagtcataccaccttttta 174  Q
    |||||||||||||||||||||||| | | |||||||||||||    
T  46459520 gtgaagagagaataaaaataggtgggccctaccaccttttta 46459561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 43638054 - 43637918
Alignment:
Q  38 ctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaattgtgaa 137  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  43638054 ctgtttggttggagagaattagagaagagagagttagtgaagagagaaatagaggagaagtatcatacttctcttgtttggatggcaatgaacttgtgaa 43637955  T
Q  138 gagagaataaaaataggtgagtcataccaccttttta 174  Q
    ||||||||||||||||||| | | |||||||||||||    
T  43637954 gagagaataaaaataggtgggccctaccaccttttta 43637918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 16366633 - 16366515
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||    
T  16366633 gaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccac 16366534  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  16366533 catcattaattatatttta 16366515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 18198371 - 18198249
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| | || ||||||||||||||||||    
T  18198371 gaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgagtcccac 18198272  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  18198271 catcattaattatattttatttt 18198249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 4888582 - 4888463
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||    
T  4888582 gaagatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccac 4888483  T
Q  282 catcattaattatattttat 301  Q
    ||||||||||||||||||||    
T  4888482 catcattaattatattttat 4888463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 45260387 - 45260505
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  |||||     
T  45260387 gaagatcctctccatttggcaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccat 45260486  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  45260487 catcattaattatatttta 45260505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 44648079 - 44647959
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgag--tccc 279  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |  ||||    
T  44648079 gaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtctccc 44647980  T
Q  280 accatcattaattatatttta 300  Q
     ||||||||||||||||||||    
T  44647979 tccatcattaattatatttta 44647959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 12139442 - 12139323
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagt-gagtccca 280  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||    
T  12139442 gaagattctcttcatttggcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtccca 12139343  T
Q  281 ccatcattaattatatttta 300  Q
    ||||||||||||||||||||    
T  12139342 ccatcattaattatatttta 12139323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 47226036 - 47226152
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||| ||| |||||||| || |||||||    
T  47226036 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaat--atggtgggtcccaccactaaatgggtcccac 47226133  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  47226134 catcattaattatatttta 47226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 7362676 - 7362565
Alignment:
Q  189 ctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatt 288  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| || || |||||||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  289 aattatatttta 300  Q
    ||||||||||||    
T  7362576 aattatatttta 7362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 25084690 - 25084810
Alignment:
Q  186 atcctctccatttggcaaaataaa--tggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacca 283  Q
    ||||||||||||||| |||| |||  |  ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  25084690 atcctctccatttggaaaaaaaaaaataaagttttgtaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccacca 25084789  T
Q  284 tcattaattatattttatttt 304  Q
    |||||||||||||||||||||    
T  25084790 tcattaattatattttatttt 25084810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 33450621 - 33450499
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||     
T  33450621 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccat 33450522  T
Q  282 catcattaattatattttatttt 304  Q
    ||||||||||||| |||||||||    
T  33450521 catcattaattattttttatttt 33450499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 304
Target Start/End: Original strand, 47500243 - 47500365
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||   ||||||||| |||||||| || |||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||     
T  47500243 aagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccat 47500342  T
Q  282 catcattaattatattttatttt 304  Q
    ||||||||||||| |||||||||    
T  47500343 catcattaattattttttatttt 47500365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 41988640 - 41988520
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaatt 132  Q
    ||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||| ||| ||||| | |||||||||||||||||  ||||||  |     
T  41988640 acactctgtttggttggagagaattagagaagaaagagttaatgaagagagaaatagaagaggagtattatacttctcttgtttggatgacaaagagttc 41988541  T
Q  133 gtgaagagagaataaaaatag 153  Q
    |||||||||||||||||||||    
T  41988540 gtgaagagagaataaaaatag 41988520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 34985909 - 34986028
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    |||||||| |||||  ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||  |||||||| ||||||||| |||    
T  34985909 atcctctcaatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcat 34986008  T
Q  285 cattaattatattttatttt 304  Q
    |||||||||| |||||||||    
T  34986009 cattaattattttttatttt 34986028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 989239 - 989122
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    |||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||| || |||| ||||||||||||||  |||| |||||     
T  989239 atcctctccatttgacaaattaaatggagttt-gcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  286 attaattatattttatttt 304  Q
    ||||||||| || ||||||    
T  989140 attaattattttatatttt 989122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 39855775 - 39855891
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||| |||| |||||| |||| |||||||||||| | || ||||||||||||||||||| |||| ||||||| | ||||||||||||||| |||||| |    
T  39855775 aagattctcttcatttgacaaattaaatggagttt-gtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtcccatc 39855873  T
Q  283 atcattaattatatttta 300  Q
    ||||||||||| ||||||    
T  39855874 atcattaattaaatttta 39855891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 32916056 - 32915949
Alignment:
Q  196 tttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattata 295  Q
    ||||| |||||||||||||  | |||| ||| |||||||||||||||||||||| || |||| |||||||| |||||||||||||||||||| |||||||    
T  32916056 tttggtaaaataaatggaggat-gcaatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattata 32915958  T
Q  296 ttttatttt 304  Q
    |||| ||||    
T  32915957 ttttttttt 32915949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 47271108 - 47271180
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggt 255  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  47271108 gaagatcctctccatttagcaaaataaatggag-tttgcaatttggagagagatagacacaaaaaattgatggt 47271180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 47799895 - 47799978
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  || ||| ||||| ||||||||| |||||||||||||||||||| |||||    
T  47799895 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattatttttta 47799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 29631156 - 29631051
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    ||||||||||||||| |||||||||||||||| |||| ||| |||||  ||||||||||| |||||| |||| ||| ||||||| ||  ||||||| |||    
T  29631156 atcctctccatttggtaaaataaatggagttt-gcaatttgaagaga--tagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  286 attaattat 294  Q
    |||||||||    
T  29631059 attaattat 29631051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 33608845 - 33608949
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcatt 288  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||  | | |||| || | |||||| |||||||||||    
T  33608845 tctccatttggtaaaataaatggag-tttgcaatttggagagagataaacacaaaaaaatagatggaagatactactaccaggtgagttccaccatcatt 33608943  T
Q  289 aattat 294  Q
    ||||||    
T  33608944 aattat 33608949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 46802336 - 46802403
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||| | ||||||||    
T  46802336 gagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattat 46802403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 30588615 - 30588532
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||  ||||||||||||||||||||  ||  || ||||| ||||||||| |||||||||||||||||||| |||||    
T  30588615 ttgcaatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattatttttta 30588532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 19027685 - 19027751
Alignment:
Q  224 ttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||||||||||||||||||||| || ||||||| ||||| |||||||||  ||||||||||||||    
T  19027685 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 20726951 - 20726885
Alignment:
Q  224 ttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||||||||||||||||||||| || ||||||| ||||| |||||||||  ||||||||||||||    
T  20726951 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 28528631 - 28528549
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttt 299  Q
    |||||| ||||||||||||||||| |||||| |  |||||  ||||| ||||||| || ||||||||||||||||||| ||||    
T  28528631 ttgcaatttggagagagatagacaaaaaaaacaagtggtgagtcctatcactaagcgaatcccaccatcattaattatttttt 28528549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 14696752 - 14696825
Alignment:
Q  217 ttgcaagttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||||||||||||||||| ||||||||  |||||| ||||| |||||||||  ||||||||||||||    
T  14696752 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 14696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 19889029 - 19889112
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| || || ||||||||| ||||||||||  | |||| ||||| ||||||||| || ||||||||||||||||| |||||    
T  19889029 ttgcaatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattatttttta 19889112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 32916236 - 32916162
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||||| |||| |||||||| | |||| || ||||||||||||  | ||||||||||||||||| |||||||||    
T  32916236 agagatacacacgaaaaataggttgtgggtcataccactaagtggattccaccatcattaattattttttatttt 32916162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 304
Target Start/End: Original strand, 7712329 - 7712449
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||||||||||||||   ||||||||||||    ||||| || |||||||||||| ||| || |||||| |||  |||||||| |||||| || |||||    
T  7712329 aagatcctctccatttataaaaataaatgga-agatgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccacc 7712427  T
Q  283 atcattaattatattttatttt 304  Q
    ||| |||||||  |||||||||    
T  7712428 atctttaattactttttatttt 7712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 30102574 - 30102501
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||||| |||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  30102574 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 30102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 35737193 - 35737128
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||| | ||||| ||| ||||||||    
T  35737193 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcactaggtgggtcccacc 35737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 29844364 - 29844316
Alignment:
Q  224 ttggagagagatagacacaaaaaatagatggtggctcctaccactaagt 272  Q
    ||||||||||||||||||| ||||||||| |||| | ||||||||||||    
T  29844364 ttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 47080509 - 47080433
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaataga-tggtggctcctaccactaagtgagtcccaccatcattaatt 292  Q
    |||||| ||||||||||||||||||||||||   | || ||| ||||| ||||||| | ||||||||||||||||||    
T  47080509 ttgcaatttggagagagatagacacaaaaaaacaagtgatgggtcctatcactaagcgggtcccaccatcattaatt 47080433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 304
Target Start/End: Original strand, 11828946 - 11828991
Alignment:
Q  259 tcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    |||||||| |||||| || ||||||||||||||||| |||||||||    
T  11828946 tcctaccattaagtgggttccaccatcattaattattttttatttt 11828991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 676030 - 676094
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||| ||||||||||||  |||||  ||||| || ||| |||||| ||||||||||||||||    
T  676030 agagataaacacaaaaaatatgtggtgattcctatcattaaatgagtctcaccatcattaattat 676094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 23142567 - 23142619
Alignment:
Q  242 aaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||| |||| |  ||||||||||||||||||||||  |||||||||    
T  23142567 aaaaaatagatagtggattataccactaagtgagtcccaccactattaattat 23142619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 19901873 - 19901996
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  19901873 tgggtgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggt 19901972  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||||||||||||||||||    
T  19901973 cccaccatcattaattatatttta 19901996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 34778536 - 34778418
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  34778536 gaagatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccac 34778437  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  34778436 catcattaattatatttta 34778418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 56558394 - 56558276
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  56558394 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggtcccac 56558295  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  56558294 catcattaattatatttta 56558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 33247090 - 33247218
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| || || ||||    
T  33247090 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccac 33247189  T
Q  282 catcattaattatattttattttcttcga 310  Q
    ||||||||||||||||||||||| |||||    
T  33247190 catcattaattatattttatttttttcga 33247218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 3952125 - 3952248
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||    
T  3952125 tgggtgaagatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggt 3952224  T
Q  277 cccaccatcattaattatatttta 300  Q
    | ||||||||||||||||||||||    
T  3952225 ctcaccatcattaattatatttta 3952248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 307
Target Start/End: Original strand, 12312435 - 12312561
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagac-acaaaaaatagatggtggctcctaccactaagtgagtccca 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||    
T  12312435 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtccca 12312534  T
Q  281 ccatcattaattatattttattttctt 307  Q
     ||||||||||||||||||| ||||||    
T  12312535 tcatcattaattatattttactttctt 12312561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 5416421 - 5416543
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||    
T  5416421 tgggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacac-aaaaatagattgtgggtcctaccactaagtgggt 5416519  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||||||||||||||||||    
T  5416520 cccaccatcattaattatatttta 5416543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 5763122 - 5763240
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||    
T  5763122 gaagatcctctcaatttggcaaaatatatggagttttacaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccac 5763221  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  5763222 catcattaattatatttta 5763240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 23610757 - 23610639
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  23610757 gaagatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccac 23610658  T
Q  282 catcattaattatatttta 300  Q
    ||||||||| |||||||||    
T  23610657 catcattaaatatatttta 23610639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 18206994 - 18207118
Alignment:
Q  176 ttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgag 275  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  18206994 ttgggtgaagatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtggg 18207093  T
Q  276 tcccaccatcattaattatatttta 300  Q
    ||||| |||||||||||||||||||    
T  18207094 tcccatcatcattaattatatttta 18207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 30568008 - 30567898
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||    
T  30568008 tctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcatta 30567909  T
Q  290 attatatttta 300  Q
    |||||||||||    
T  30567908 attatatttta 30567898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 296
Target Start/End: Complemental strand, 24073731 - 24073617
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |    
T  24073731 gaagatcctccccatttggcaaaataaatggagatttgtaagttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgc 24073632  T
Q  282 catcattaattatat 296  Q
    |||||||||||||||    
T  24073631 catcattaattatat 24073617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 33262512 - 33262630
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |  |||||||    
T  33262512 gaagatcctctctatttggcaaaataaattgtgttttgcaagttagagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccac 33262611  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  33262612 catcattaattatatttta 33262630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 38079680 - 38079798
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |||||| ||||||||  | ||||    
T  38079680 gaagatcctctccatttaacaaaataaatggagttttgctagtttgagagagatagacacaagaaatagatggtgggtcctactactaagtggattccac 38079779  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  38079780 catcattaattatatttta 38079798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 39862632 - 39862514
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||  ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||| ||||| ||||    
T  39862632 gaagatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccac 39862533  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  39862532 catcattaattatatttta 39862514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 50382654 - 50382516
Alignment:
Q  34 cactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaattg 133  Q
    |||||||||||||||||||||||||  |||||| ||||| ||||||||| ||||||| |||||||| ||||||||||||||||||| || |||||  |||    
T  50382654 cactctgtttggttggagagaattaaagaagagagagtt-gtgaagagaaaaatagaagagaagtaccaaacttctcttgtttggaaaggaaagagtttg 50382556  T
Q  134 tgaagagagaataaaaataggtgagtcataccaccttttt 173  Q
    |||||||||||| |||||||||| | | ||||||||||||    
T  50382555 tgaagagagaatgaaaataggtgggccctaccaccttttt 50382516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 12153269 - 12153185
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  12153269 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaattagatggtgggtcccacca 12153185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 47922327 - 47922445
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  ||||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||     
T  47922327 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcccat 47922426  T
Q  282 catcattaattatatttta 300  Q
    ||||  ||||||| |||||    
T  47922427 catctataattatttttta 47922445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 52018883 - 52018794
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||| ||| ||||    
T  52018883 tgggtgaagatcctctccatttagcaaaataaatggagttttgcaagttggagagagatagatacaaaaaataaatagtggatcccacca 52018794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 1871388 - 1871270
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    ||||||||| ||||| ||||||||||||||| | |||| ||||||||||||||||| |||| |||||| |||| |||||| |||||||| |||||| |||    
T  1871388 gatcctctcaatttgacaaaataaatggagtat-gcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtcccatcat 1871290  T
Q  285 cattaattatattttatttt 304  Q
    |||||||||| || ||||||    
T  1871289 cattaattattttatatttt 1871270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 23474224 - 23474115
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||||||||| ||| |||||||||||| | |||| |||| |||||||||||||| |||||||||||||| |||||| | | ||||| |||||||    
T  23474224 aagatcctctccatttagcataataaatggagtat-gcaatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccacc 23474126  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  23474125 atcattaatta 23474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 56269071 - 56269153
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttt 299  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  56269071 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt 56269153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 47922052 - 47922157
Alignment:
Q  195 atttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||||||||||| |||||||||||    | ||||| ||||||||||||||| |||| || |||||||||||| || ||||||||||||| |||    
T  47922052 atttggcaaaataaatggaattttgcaagtt----aaagataaacacaaaaaatagatagtgggtcttaccactaagtgggttccaccatcattaaatat 47922147  T
Q  295 attttatttt 304  Q
    ||||||||||    
T  47922148 attttatttt 47922157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 33524383 - 33524313
Alignment:
Q  176 ttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaa 246  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  33524383 ttgggtgaagatcctctccatttggcaaaataaatggagatttggaagttggagagagatagatacaaaaa 33524313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 56453816 - 56453898
Alignment:
Q  218 tgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||| || |||||| |||||||||||||| ||||| |||||    
T  56453816 tgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattatttttta 56453898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 34927596 - 34927488
Alignment:
Q  187 tcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    ||||||||||||   ||||||||||| ||||||||| ||  |||||||||||||||||| |||||||||||| |||||||| |||||  ||| || ||||    
T  34927596 tcctctccatttactaaaataaatggggttttgcaatttaaagagagatagacacaaaagaatagatggtgggtcctaccattaagtatgtctcatcatc 34927497  T
Q  286 attaattat 294  Q
    |||||||||    
T  34927496 attaattat 34927488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 5524527 - 5524444
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||| ||||||||  |||||| ||||| || |||||| |||||||||||||||||||| |||||    
T  5524527 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattatttttta 5524444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 37002246 - 37002329
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||| ||||||||||||||||||||  |||||| |||||  |||||||| |||||||||||||||||||| |||||    
T  37002246 ttgcaatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattatttttta 37002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 36688183 - 36688260
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||||| ||||||||||||||||||||||||||  || ||  ||||| ||||||||| ||||||||||||||||||||    
T  36688183 ttgcaatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattat 36688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 42010197 - 42010114
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||| ||||||||||  ||| || ||||| |||||| || |||||||||||||||||||| |||||    
T  42010197 ttgcaatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattatttttta 42010114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 26429061 - 26428971
Alignment:
Q  205 ataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||||||||||  |||||||||| | || ||| || |||||||||||||    
T  26429061 ataaatgaagttttgcaatttggagaaagatagacacaaaagaatagatggtgagtcctaccactgaatgggtctcatcatcattaattat 26428971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 31862246 - 31862298
Alignment:
Q  248 tagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  31862246 tagatggtggatcctaccactaagtgggtcccaccatcattaattatttttta 31862298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 293
Target Start/End: Complemental strand, 13493385 - 13493276
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagtt--ggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||||||| ||||| |||||||||||||| | ||||| ||   |||||||||||||||  ||||||||| |||| ||| |||||||||||||||||       
T  13493385 gatcctctctatttgacaaaataaatggag-tatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtcccttt 13493287  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  13493286 atcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 1015849 - 1015931
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttt 299  Q
    |||||| || |||||||||||||||||||||||  |||||| ||| | || || ||| |||||||||||||||||||| ||||    
T  1015849 ttgcaatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 12241440 - 12241486
Alignment:
Q  254 gtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  12241440 gtgggtcctaccactaagtgggtcccaccatcattaattatatttta 12241486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 48914480 - 48914596
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||| ||||||||| |||||||||||||||  | |||| || ||||||||| |||||| ||||||||| |||| ||||| ||  ||||| || || |     
T  48914480 aagatcttctccatttagcaaaataaatggagaat-gcaatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgct 48914578  T
Q  283 atcattaattatatttta 300  Q
    |||||||||||| |||||    
T  48914579 atcattaattatttttta 48914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 48084533 - 48084603
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||| |||| |||  |||||| | ||| ||||||||| |||||||||||||||||||| |||||    
T  48084533 agagatagacataaaacataagtggtgggttctagcactaagtgggtcccaccatcattaattatttttta 48084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 17493083 - 17493010
Alignment:
Q  217 ttgcaagttggagagagatagacacaa-aaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||||||||||||||||||| ||||||  |||||| ||||| |||||||||  | ||||||||||||    
T  17493083 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggattccaccatcatta 17493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 32146583 - 32146510
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||| |||||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  32146583 ttgcaatttggagagagatagatacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 32146510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 36532738 - 36532623
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||||||| ||  |||||||||||||||   ||| || |||||||||||||||| |||||| || |||| ||||| || | |||| || |||||    
T  36532738 aagatcctctccatctgataaaataaatggagttca-caatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttccacc 36532640  T
Q  283 atcattaattatatttta 300  Q
    || ||||||||| |||||    
T  36532639 at-attaattatttttta 36532623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 46239047 - 46238974
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||| |||||||||||||||||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  46239047 ttgcaatttgaagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 46238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 50483520 - 50483628
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    |||| ||||||||| ||||||||||| |||| | |||| ||||||| ||||||||||  |||||||||  | | ||| |||| |||||||||| ||  ||    
T  50483520 gatcatctccatttagcaaaataaattgagtat-gcaatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattat 50483618  T
Q  285 cattaattat 294  Q
    ||||||||||    
T  50483619 cattaattat 50483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 53526169 - 53526096
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||||| |||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  53526169 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 53526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 55160365 - 55160438
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||| |||||||||||||||||| ||  |||||| ||||| |||||||||  ||||||||||||||    
T  55160365 ttgcaatttggaaagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 55160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 25219070 - 25219003
Alignment:
Q  224 ttggagagagatagacacaaaaaataga--tggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||||||||||||||||||||| | |  |||||| ||||| |||||||||  ||||||||||||||    
T  25219070 ttggagagagatagacacaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 25219003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 40215455 - 40215515
Alignment:
Q  232 agatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatt 292  Q
    ||||| ||| ||||| |||||  ||| |||||||||| |||||||||||||||||||||||    
T  40215455 agatacacataaaaattagattatggatcctaccacttagtgagtcccaccatcattaatt 40215515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 33841768 - 33841830
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaat 248  Q
    |||||||||||||||  ||| |||||||||| |  ||| |||||||||||||||||||||||||    
T  33841768 gatcctctccatttgttaaagtaaatggagtata-caatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 23126827 - 23126885
Alignment:
Q  30 tttacactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaata 88  Q
    |||||||| |||||| ||| |||||| |||||||||| ||| ||| |||||||||||||    
T  23126827 tttacactatgtttgtttgcagagaaatagggaagagagagatagggaagagagaaata 23126885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 25442190 - 25442252
Alignment:
Q  238 acacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||||| |||| |||||||||||||||  || ||||  |||||||||| |||||    
T  25442190 acacaaaaaatagattgtgggtcctaccactaagtggatctcaccgacattaattatttttta 25442252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 5361506 - 5361457
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    |||||| ||||||||||||||||||||||||||  |||||| ||| ||||    
T  5361506 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccacca 5361457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 28701836 - 28701916
Alignment:
Q  224 ttggagagagatagacacaaaaaa-tagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||||||||||||||| |||||| ||  |||||| ||  | ||||||||| ||| |||||||||||||||| |||||||||    
T  28701836 ttggagagagatagacaaaaaaaaataagtggtgggtcaaatcactaagtgggtctcaccatcattaattat-ttttatttt 28701916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 44937700 - 44937659
Alignment:
Q  25 ggtcttttacactctgtttggttggagagaattagggaagag 66  Q
    ||||| |||||||||||||||||| |||||| ||||||||||    
T  44937700 ggtctattacactctgtttggttgaagagaaatagggaagag 44937659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 28069834 - 28069712
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  28069834 gaagatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccac 28069735  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  28069734 catcattaattatattttatttt 28069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 30426624 - 30426747
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  30426624 tgggtgaagaccctctccatttggcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggt 30426723  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||||||||||||||||||    
T  30426724 cccaccatcattaattatatttta 30426747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 10672468 - 10672590
Alignment:
Q  176 ttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgag 275  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  10672468 ttgggtgaagattctctccatttggcaaaataaatggagttttgcaagttggaga--gatagacacaaaaaatagatggtggatcctaccactaagtgag 10672565  T
Q  276 tcccaccatcattaattatatttta 300  Q
    |||||||||||||||||||||||||    
T  10672566 tcccaccatcattaattatatttta 10672590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 298
Target Start/End: Complemental strand, 36991471 - 36991355
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||| |||||||    
T  36991471 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccac 36991372  T
Q  282 catcattaattatattt 298  Q
    |||||||||||||||||    
T  36991371 catcattaattatattt 36991355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 44859129 - 44859249
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||   ||||||||||||||| | ||||||||||||| |||||||    
T  44859129 gaagatcctctctatttgacaaaataaatggagttttgcaagttagagagagatagact--aaaaatagatggtgggttctaccactaagtgggtcccac 44859226  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  44859227 catcattaattatattttatttt 44859249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 40695208 - 40695325
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  40695208 gaagatcttctccatttagcaaaataaatggagtttgg-aagttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccac 40695306  T
Q  282 catcattaattatatttta 300  Q
    |||||||| ||||||||||    
T  40695307 catcattagttatatttta 40695325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 10652577 - 10652694
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| || ||| ||||| || |||||||    
T  10652577 gaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattgggtcccac 10652676  T
Q  282 catcattaattatatttt 299  Q
    ||||||||||||||||||    
T  10652677 catcattaattatatttt 10652694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 45113385 - 45113263
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  ||||||||| | ||||||||| ||||||||| |||||||||||| |||||||||||| ||| ||||||||||| ||||||     
T  45113385 aagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgtcccat 45113286  T
Q  282 catcattaattatattttatttt 304  Q
    ||||||||||||| |||||||||    
T  45113285 catcattaattattttttatttt 45113263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 214 - 304
Target Start/End: Complemental strand, 24102099 - 24102009
Alignment:
Q  214 gttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  24102099 gttttgcaagtttaagagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattatatttcatttt 24102009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 41511373 - 41511259
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||||||| | ||||||||||| |||| ||||| |||||||||  | ||||||||    
T  41511373 atcctctccgtttaacaaaataaatggagttttgcaagttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatc 41511274  T
Q  286 attaattatatttta 300  Q
    |||||||||||||||    
T  41511273 attaattatatttta 41511259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 28318856 - 28318980
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaat------agatggtggctcctaccactaagtgag 275  Q
    ||||||| |||  |||||| |||||||||||||||||||||||| |||||||||| ||| |||||||      |||| |||| ||||||||||||||| |    
T  28318856 gaagatcttctttatttggtaaaataaatggagttttgcaagtttgagagagatatacaaaaaaaataaaaaaagatagtgggtcctaccactaagtggg 28318955  T
Q  276 tcccaccatcattaattatatttta 300  Q
    ||| |||||||||||||||||||||    
T  28318956 tccaaccatcattaattatatttta 28318980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 5033367 - 5033310
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagac 239  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5033367 gaagatcctttccatttggcaaaataaatggagttttgcaagttggagagagatagac 5033310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 37966405 - 37966520
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||||||||||||||||||||||||  ||||||| ||| ||||||||| ||||||||||||||| || | |||||||||||| |||  ||||      
T  37966405 aagatcctctccatttggcaaaataaatgga-atttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaattga-acccaat 37966502  T
Q  283 atcattaattatatttta 300  Q
    | ||||||||||||||||    
T  37966503 accattaattatatttta 37966520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 26749543 - 26749626
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  || ||| ||||| ||||||||| |||||||||||||||||||| |||||    
T  26749543 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattatttttta 26749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 6014309 - 6014191
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  ||||||||| ||||||||||| ||||||| |||||||||||||| |||||||| | | |||||||| ||||||  ||| |     
T  6014309 aagatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctat 6014210  T
Q  282 catcattaattatatttta 300  Q
     |||||||||||| |||||    
T  6014209 tatcattaattatgtttta 6014191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 34612634 - 34612562
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttt 299  Q
    |||||||||||||||||||||||  |||||| ||||| ||||||||| ||| |||||||||||||||| ||||    
T  34612634 gagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttt 34612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 42761808 - 42761710
Alignment:
Q  202 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||  |  |||| ||| ||||||||||||||| ||||||||| |||| |||||||||| |||| || ||| ||||||||||||| |||||    
T  42761808 aaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttccatcatcattaattatttttta 42761710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 12177572 - 12177625
Alignment:
Q  213 agttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  12177572 agttttgcaagttggagagagatagatacaaaaaatagatggtggatcccacca 12177625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 12422000 - 12422053
Alignment:
Q  213 agttttgcaagttggagagagatagacacaaaaaatagatggtggctcctacca 266  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  12422000 agttttgcaagttggagagagatagatacaaaaaatagatggtggatcccacca 12422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 1937149 - 1937233
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaataga-tggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||   | |||||| ||||| ||||||| | |||||||||||||||||||| |||||    
T  1937149 ttgcaatttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattatttttta 1937233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 18689597 - 18689495
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||| |||| |||||||||||||| | | |||| ||||||||||||| ||| | ||||||||| |||| |||||||| |||||| || ||| ||||||||    
T  18689597 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 18689499  T
Q  290 atta 293  Q
    ||||    
T  18689498 atta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 5033150 - 5033108
Alignment:
Q  231 gagatagacacaaaaaatagatggtggctcctaccactaagtg 273  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  5033150 gagatagacacaaaaaatagatggtgggtcctaccactaagtg 5033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 17867654 - 17867727
Alignment:
Q  217 ttgcaagttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||||||||||||||||| ||||||||  |||||| ||||| |||||||||  ||||||||||||||    
T  17867654 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 17867727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 21486993 - 21486926
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||| || | |||||||| || |||| | |||| | |||||||||||||||||||||||||||    
T  21486993 gagagagatggatataaaaaatatatagtgggttctactattaagtgagtcccaccatcattaattat 21486926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 24557177 - 24557252
Alignment:
Q  218 tgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatta 293  Q
    ||||| ||||| ||||||| | ||| ||||||| |  ||| |||||||| ||||||||||||| ||||||||||||    
T  24557177 tgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 6399991 - 6399921
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||||||||||||||||||| || ||  || |||||  |||||  |||||||||||| |||||    
T  6399991 agagatagacacaaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattatttttta 6399921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 30796344 - 30796275
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||| | ||||||| |||| || || || ||||||||| |||||||||||||||||||| |||||    
T  30796344 agagatagacgctaaaaataaatggcgggtc-tatcactaagtgggtcccaccatcattaattatttttta 30796275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 36748494 - 36748563
Alignment:
Q  224 ttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||| ||||||||||||||| ||||  | || |||||||| ||||||  |||||||||||||||||||    
T  36748494 ttggagatagatagacacaaaaa-tagacagcgggtcctaccattaagtggatcccaccatcattaattat 36748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 208178 - 208060
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||     
T  208178 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccat 208079  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  208078 catcattaattatatttta 208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 5e-50; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 43719901 - 43720029
Alignment:
Q  176 ttgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgag 275  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| |    
T  43719901 ttgggtgaagatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtggg 43720000  T
Q  276 tcccaccatcattaattatattttatttt 304  Q
    |||||||||||||||||||||||||||||    
T  43720001 tcccaccatcattaattatattttatttt 43720029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 19830386 - 19830509
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||| ||    
T  19830386 tgggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggt 19830485  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||||||||||||||||||    
T  19830486 cccaccatcattaattatatttta 19830509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 2230103 - 2229980
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |    
T  2230103 tgggtgaacatcctctccatttggcaaaataattggagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtt 2230004  T
Q  277 cccaccatcattaattatatttta 300  Q
     |||||||||||||||||||||||    
T  2230003 tccaccatcattaattatatttta 2229980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 27033771 - 27033648
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  |    
T  27033771 tgggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggat 27033672  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||||||||||||||||||    
T  27033671 cccaccatcattaattatatttta 27033648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 177 - 300
Target Start/End: Complemental strand, 34373951 - 34373828
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| |||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||    
T  34373951 tgggtgaagattctctccatttggcaaaataaattgtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggt 34373852  T
Q  277 cccaccatcattaattatatttta 300  Q
    ||||||||||||||||||||||||    
T  34373851 cccaccatcattaattatatttta 34373828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 46167504 - 46167390
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||     
T  46167504 atcctctccatttagcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccatt 46167405  T
Q  286 attaattatatttta 300  Q
    |||||||||||||||    
T  46167404 attaattatatttta 46167390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 34373559 - 34373663
Alignment:
Q  196 tttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattata 295  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  34373559 tttggcaaaataaatagagttttgcaagttccatagagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 34373658  T
Q  296 tttta 300  Q
    |||||    
T  34373659 tttta 34373663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 40851889 - 40851781
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||||||| |||| ||    
T  40851889 gaagatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctac 40851790  T
Q  282 catcattaa 290  Q
    |||||||||    
T  40851789 catcattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 24754772 - 24754673
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| |||||||    
T  24754772 gaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 24763769 - 24763670
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| |||||||    
T  24763769 gaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 48084934 - 48084812
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||     
T  48084934 aagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccat 48084835  T
Q  282 catcattaattatattttatttt 304  Q
    ||||||||||||| |||||||||    
T  48084834 catcattaattattttttatttt 48084812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 12403061 - 12402963
Alignment:
Q  202 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  12403061 aaaataaatagagttttgcaagttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccaccattattaattatatttta 12402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 550790 - 550894
Alignment:
Q  195 atttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||||||||||||||| |||| ||||||| ||||| | |||||||||||||||||| ||||| || |||||| |||||||||| |||| ||||    
T  550790 atttggcaaaataaatggagttt-gcaatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttat 550888  T
Q  295 atttta 300  Q
    ||||||    
T  550889 atttta 550894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 8322828 - 8322728
Alignment:
Q  50 agagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaattgtgaagagagaataaaa 149  Q
    |||||||||  |||||| ||||||||||||||||||| ||| ||||||||||| | ||||| |||||| ||||||||||| |||||| ||||||||||||    
T  8322828 agagaattaaagaagagagagttagtgaagagagaaagagaagagaagtatcatatttctcctgtttgaatagcaaagaatttgtgaggagagaataaaa 8322729  T
Q  150 a 150  Q
    |    
T  8322728 a 8322728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 31523663 - 31523746
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| |||||  |||||||| |||||||||||||||||||| |||||    
T  31523663 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattatttttta 31523746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 566746 - 566852
Alignment:
Q  194 catttggcaaaataaatggagttttgcaagttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatt 292  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||| |||| || ||||| || |||||| |||||||| | |||| ||    
T  566746 catttggcaaaataaatggag-tttgcaatttggagagagatagatacaaaaaaatatatggcggatcctatcattaagtgggtcccacctttattattt 566844  T
Q  293 atatttta 300  Q
    ||||||||    
T  566845 atatttta 566852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 42613160 - 42613077
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||| ||||||||||||| ||||||||  |||||| ||||| ||||||||| |||||||||||||||||||| |||||    
T  42613160 ttgcaatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattatttttta 42613077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 49679265 - 49679348
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  ||| || ||||| |||||| || |||||||||||||||||||| |||||    
T  49679265 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattatttttta 49679348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 24647958 - 24647905
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggaga 230  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24647958 tgggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggaga 24647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 40810357 - 40810438
Alignment:
Q  224 ttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||||||||||| ||| |||| |||||||||||| ||  ||||||||||| |||||| ||||||||||||| |||||||||    
T  40810357 ttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatcattaattattttttatttt 40810438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 10474402 - 10474509
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccat 284  Q
    ||||||||| ||||| || ||||||||||| | ||||| || |||||| ||||||||| |||||||||  ||| |||||| | ||||||||| ||||||     
T  10474402 gatcctctctatttgacataataaatggag-tatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccaccaa 10474500  T
Q  285 cattaatta 293  Q
    |||||||||    
T  10474501 cattaatta 10474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 28229365 - 28229472
Alignment:
Q  184 agatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacca 283  Q
    |||||||||||||||   |||||||||||||| | |||| | ||| ||| ||||||||||||||||| |||||  ||||| || ||| |||||| |||||    
T  28229365 agatcctctccatttattaaaataaatggagtgt-gcaattaggaaagatatagacacaaaaaataggtggtgagtcctatcattaaatgagtctcacca 28229463  T
Q  284 tcattaatt 292  Q
    |||||||||    
T  28229464 tcattaatt 28229472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 29586449 - 29586340
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||| ||||| ||| |||||||||||| | |||  ||||||||||||||||||| ||||||||| ||   || ||| | |||||| ||| ||||    
T  29586449 aagatcctcttcatttagcataataaatggagtat-gcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcacc 29586351  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  29586350 atcattaatta 29586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 33632935 - 33632855
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctac 264  Q
    |||||| ||||||||||| | |||||||||||  | |||| ||||||||||||||||||| ||||||||| |||| ||||||    
T  33632935 aagatcttctccatttggtataataaatggagcat-gcaatttggagagagatagacacataaaatagatagtggatcctac 33632855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 1995513 - 1995441
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||| | |||||||||  ||  |||||||| |||||||||| |||||||||||||||| |||||    
T  1995513 agagagatagacatagaaaatagataatgagtcctaccaataagtgagtctcaccatcattaattatttttta 1995441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 54911723 - 54911658
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatta 293  Q
    ||||||||||| ||| ||||||| | |||| |||||||| ||| ||||| ||||||||||||||||    
T  54911723 agagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 25285843 - 25285907
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatt 292  Q
    ||||||||||||||| ||||||||| |||| ||||| || ||| |||| ||||||||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaatt 25285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 46111000 - 46111073
Alignment:
Q  30 tttacactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaactt 107  Q
    ||||||||||||||||||||||||  |||  |||||  ||||||||||| ||||||||||| |||||||  |||||||    
T  46111000 tttacactctgtttggttggagag--ttaatgaaga--gagttagtgaacagagaaatagaagagaagtgccaaactt 46111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 44638044 - 44637935
Alignment:
Q  194 catttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatta 293  Q
    |||||| |||||||||||||| | ||||| || |||||||||| ||||| ||||||||| ||||  ||||| | |||||  |||| ||  |||||| |||    
T  44638044 catttgacaaaataaatggag-tatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtcattagtta 44637946  T
Q  294 tattttatttt 304  Q
    | |||||||||    
T  44637945 ttttttatttt 44637935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 48950671 - 48950613
Alignment:
Q  236 agacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||| ||||||| |||||| ||||| || ||| |||||| ||||||||||||||||    
T  48950671 agacacataaaataggtggtggatcctatcattaaatgagtctcaccatcattaattat 48950613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 51982547 - 51982656
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||||||||||||||   ||||||||||||    ||||| ||||||||||||||| ||| ||||||| | |||| | ||| || ||||||||| | | |    
T  51982547 aagatcctctccatttataaaaataaatgga-agatgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatc 51982645  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  51982646 atcattaatta 51982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 30235418 - 30235489
Alignment:
Q  185 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg 257  Q
    |||| ||| ||||||  |||||||||||||| | |||| ||| ||||||||||||| ||||||||||| ||||    
T  30235418 gatcatcttcatttgttaaaataaatggagtat-gcaatttgaagagagatagacataaaaaatagattgtgg 30235489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 33980001 - 33979937
Alignment:
Q  230 agagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||||||||||||||||||| ||||||  ||||| || ||| | |||| ||| ||||||||||||    
T  33980001 agagatagacacaaaaaataaatggtgaatcctatcattaaataagtctcactatcattaattat 33979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 16357 - 16479
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||     
T  16357 gaagatcctctccgttaggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccat 16456  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  16457 catcattaattatattttatttt 16479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 50294023 - 50294145
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||| ||    
T  50294023 gaagatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctac 50294122  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  50294123 catcattaattatattttatttt 50294145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 50484501 - 50484383
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||    
T  50484501 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccac 50484402  T
Q  282 catcattaattatatttta 300  Q
    | |||||||||||||||||    
T  50484401 cgtcattaattatatttta 50484383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 12151882 - 12151764
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||    
T  12151882 gaagatcttctccatttggcaaaataaatggagttttgccagttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccac 12151783  T
Q  282 catcattaattatatttta 300  Q
    |||||||||||||||||||    
T  12151782 catcattaattatatttta 12151764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 48327114 - 48327235
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccac 281  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||| || ||||    
T  48327114 gaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccac 48327212  T
Q  282 catcattaattatattttatttt 304  Q
    |||||||||||||||||||||||    
T  48327213 catcattaattatattttatttt 48327235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 23861907 - 23862037
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg---ctcctaccactaagtg 273  Q
    |||| ||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  23861907 tgggtgaatatcctctctatttagcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtggtgaatcctaccactaagtg 23862006  T
Q  274 agtcccaccatcattaattatattttatttt 304  Q
      |||||||||||||||||||||||||||||    
T  23862007 gatcccaccatcattaattatattttatttt 23862037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 46600962 - 46600822
Alignment:
Q  33 acactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaatt 132  Q
    |||||||||||||||||||||| |||  |||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||| |||||  ||    
T  46600962 acactctgtttggttggagagagttaaagaagagagagttagtgaagagagaaatacaagagaagtaacaaacttctcttgtttggataggaaagagttt 46600863  T
Q  133 gtgaagagagaataaaaataggtgagtcataccaccttttt 173  Q
    ||||||||||||||||||||||||   | ||||||||||||    
T  46600862 gtgaagagagaataaaaataggtggaccctaccaccttttt 46600822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 46086276 - 46086133
Alignment:
Q  30 tttacactctgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaa 129  Q
    |||||||||| |||||||||||||| |||  |||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||     
T  46086276 tttacactctctttggttggagagagttaaagaagagagagttagtgaagagagaaatagaagagaagtaacaaacttctgttgtttggataggaaagag 46086177  T
Q  130 attgtgaagagagaataaaaataggtgagtcataccaccttttt 173  Q
     ||||||| |||||||||||||||||| | | ||||||||||||    
T  46086176 tttgtgaatagagaataaaaataggtgggccctaccaccttttt 46086133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 40328394 - 40328275
Alignment:
Q  178 gggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||| ||| ||||||||||| ||     
T  40328394 gggcgaagatcctctccatttggcaaaataaatggagttttgcaaattg--gagagatagacac-aaaaatagatggtgggtcccaccactaagtgggtt 40328298  T
Q  278 ccaccatcattaattatatttta 300  Q
    |||||||||||| ||||||||||    
T  40328297 ccaccatcattagttatatttta 40328275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 12380837 - 12380907
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12380837 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 12384904 - 12384974
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12384904 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 183 - 304
Target Start/End: Original strand, 18976265 - 18976386
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagatggtggctcctaccactaagtgagtcccac 281  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||| |||| |||||  ||||||     
T  18976265 aagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggtcccat 18976364  T
Q  282 catcattaattatattttatttt 304  Q
    ||||||||||||| |||||||||    
T  18976365 catcattaattat-ttttatttt 18976386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 7840634 - 7840739
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| |||||||| |||| | ||    
T  7840634 tgggtgaagatcctattcatttggcagaataaatggagttttgtaagttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggt 7840733  T
Q  277 cccacc 282  Q
    ||||||    
T  7840734 cccacc 7840739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 24977343 - 24977233
Alignment:
Q  193 ccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatt 292  Q
    |||||| ||||||||||||  ||||  ||| || ||||||||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||| ||    
T  24977343 ccatttagcaaaataaatgatgttta-caatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagtt 24977245  T
Q  293 atattttatttt 304  Q
    ||||||||||||    
T  24977244 atattttatttt 24977233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 45978120 - 45978045
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg 257  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45978120 gaagatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgg 45978045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 32361271 - 32361377
Alignment:
Q  186 atcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatc 285  Q
    |||||||||||||||  |||||| | |||||||| ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||  |||||| ||||    
T  32361271 atcctctccatttggtgaaataattagagttttgtaagttggagagagatggacacaaaagatagatggtggatcctactactaagtaggtcccatcatc 32361370  T
Q  286 attaatt 292  Q
    |||||||    
T  32361371 attaatt 32361377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 12380924 - 12380988
Alignment:
Q  236 agacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatatttta 12380988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 12384991 - 12385055
Alignment:
Q  236 agacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatatttta 12385055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 30077639 - 30077722
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||||||||||||  |||||| | ||| ||||||||||||||||| |||||||||||| |||||    
T  30077639 ttgcaatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattatttttta 30077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 39426317 - 39426207
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    ||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| ||||||||| |||| |||||||||||| || ||||||| |||||||    
T  39426317 tctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcatta 39426218  T
Q  290 attatatttta 300  Q
    ||||| |||||    
T  39426217 attatttttta 39426207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 52280034 - 52280117
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||| ||||||||||||||||| ||||||||  |||||| ||||| |||||||||  ||||||||||||||||||| |||||    
T  52280034 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattatttttta 52280117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 5132101 - 5132180
Alignment:
Q  39 tgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttgg 118  Q
    ||||||||| ||||||| || | ||||| ||  ||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  5132101 tgtttggttagagagaaataagaaagagagatctagagaagagagaaatagaagagaagtagcaaacttctcttgtttgg 5132180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 24413291 - 24413354
Alignment:
Q  231 gagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||||||||||||||||| |||||||| ||||| || ||| || ||||||||||||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattat 24413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 31492373 - 31492452
Alignment:
Q  39 tgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttgg 118  Q
    |||||||||| |||||| || | ||||| || |||| ||||||||||||| | |||||||| ||||||||||||||||||    
T  31492373 tgtttggttgaagagaaataagaaagagagatttagagaagagagaaatataagagaagtagcaaacttctcttgtttgg 31492452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 1228501 - 1228563
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaa 245  Q
    |||||||||| |||||   ||||||||||||||||||||| ||||||||||| ||||||||||    
T  1228501 aagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacacaaaa 1228563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 5047377 - 5047463
Alignment:
Q  218 tgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatattttatttt 304  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| ||| |||||||||||||||||||| || ||||||    
T  5047377 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattattttatatttt 5047463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 32618913 - 32618805
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||| ||||||||| |||||||||||| |  ||| |||||||||||| |||| | ||| ||||| |||| |||||| | |||||  ||||||||    
T  32618913 aagatcctcttcatttggcataataaatggagtatc-caatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccacc 32618816  T
Q  283 atcattaatta 293  Q
    |||||||||||    
T  32618815 atcattaatta 32618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 30860741 - 30860794
Alignment:
Q  194 catttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 247  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  30860741 catttagcaaaatgaatggagttttgcaagttggagagatatagacataaaaaa 30860794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 26860056 - 26860128
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||||| ||||||||| || | ||||| |||||||||  |||||| |||||||||||| |||||    
T  26860056 agagagatagacacataaaatagatagtaggtcctatcactaagtggatcccacaatcattaattatttttta 26860128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 6948825 - 6948899
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaataga--tggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| ||||||||||||||||| |||||||| |  |||||| ||||| |||||||||  ||||||||||||||    
T  6948825 ttgcaatttggagagagatagacaaaaaaaatataagtggtgggtcctatcactaagtggatcccaccatcatta 6948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 32887785 - 32887852
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||| ||||||||||| |||||| || |||| |||||||| ||| || ||||||||||||||||||||    
T  32887785 gagaaagatagacacataaaataaatagtggatcctaccattaaatgggtcccaccatcattaattat 32887852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 18107316 - 18107389
Alignment:
Q  217 ttgcaagttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||||||||||||||||| ||||||||  |||||| ||||| |||||| ||  ||||||||||||||    
T  18107316 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaaatggatcccaccatcatta 18107389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 7845043 - 7844992
Alignment:
Q  242 aaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaatta 293  Q
    |||||||||||  ||| ||||||||||||||| |||||||||| ||||||||    
T  7845043 aaaaaatagatattggatcctaccactaagtgtgtcccaccattattaatta 7844992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 23916128 - 23916089
Alignment:
Q  255 tggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  23916128 tggctcctaccactacgtgggtcccaccatcattaattat 23916089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 46608409 - 46608455
Alignment:
Q  254 gtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||    
T  46608409 gtgggtcctaccactaagtgggacccaccatcattaattatttttta 46608455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 4796268 - 4796163
Alignment:
Q  39 tgtttggttggagagaattagggaagagcgagttagtgaagagagaaatagaggagaagtatcaaacttctcttgtttggatagcaaagaaattgtgaag 138  Q
    ||||||||| ||||||| ||| | |||| ||| ||| ||||||||||| ||| |||||||   | | |||||||||||||  || | |||||||| ||||    
T  4796268 tgtttggtttgagagaaatagaggagagagagatagagaagagagaaagagaagagaagttggagatttctcttgtttggtaagaagagaaattgagaag 4796169  T
Q  139 agagaa 144  Q
    ||||||    
T  4796168 agagaa 4796163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 46045767 - 46045690
Alignment:
Q  217 ttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattat 294  Q
    |||||| ||||||||||||  ||| ||||||||  || ||  ||||| |||||||||  |||||||||||||||||||    
T  46045767 ttgcaacttggagagagatgaacaaaaaaaataagtgatgagtcctatcactaagtgtatcccaccatcattaattat 46045690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 26372321 - 26372249
Alignment:
Q  228 agagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    ||||||||||||||  ||||||||   | | |||||||| |||||| ||||||||| |||||||||| |||||    
T  26372321 agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccaccattaattatttttta 26372249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 33441603 - 33441531
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttt 299  Q
    |||||||||||||||||||||||  |||||| || || |  ||| ||||||| | ||||||||||||| ||||    
T  33441603 gagagagatagacacaaaaaataagtggtggatcatatctttaattgagtcctatcatcattaattatttttt 33441531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 7266 - 7140
Alignment:
Q  182 gaagatcctctccatttggcaaaataaat----ggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtc 277  Q
    |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||     
T  7266 gaagatcctctccatttggcaaaataaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggtt 7167  T
Q  278 ccaccatcattaattatattttatttt 304  Q
    |||||||||||||||||||||||||||    
T  7166 ccaccatcattaattatattttatttt 7140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 9156 - 9276
Alignment:
Q  177 tgggcgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagt 276  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||  |    
T  9156 tgggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggat 9255  T
Q  277 cccaccatcattaattatatt 297  Q
     ||||||||||||||||||||    
T  9256 tccaccatcattaattatatt 9276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 22404 - 22520
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    |||||||||| ||||| |||||||||||||||||| |||| ||  | ||||||||||||||||||||||| |||| |||||||||||||||||| ||||     
T  22404 aagatcctctgcatttagcaaaataaatggagttt-gcaatttacaaagagatagacacaaaaaatagatagtggatcctaccactaagtgagttccaca 22502  T
Q  283 atcattaattatatttta 300  Q
    || |||||||||||||||    
T  22503 ataattaattatatttta 22520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 6396 - 6513
Alignment:
Q  183 aagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccacc 282  Q
    ||||||||||| |||| | |||||||||||  |||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||| || || | |||    
T  6396 aagatcctctctatttcgtaaaataaatgggattttgcaagttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggtacaacc 6495  T
Q  283 atcattaattatatttta 300  Q
    ||||||||||||||||||    
T  6496 atcattaattatatttta 6513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 73817 - 73892
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgg 257  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  73817 gaagatcctctctatttggcaaaataaatggtgttttgcaagttggagagagatagacgcaaaatatagatggtgg 73892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 13795 - 13710
Alignment:
Q  182 gaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagac-acaaaaaatagatggtggctcctacca 266  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||| ||| ||||    
T  13795 gaagatcttctccatttggcaaaataaatagagttttgctagttggagagagatagacaaaaaaaaatagatggtgggtcccacca 13710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 17311 - 17384
Alignment:
Q  227 gagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcattaattatatttta 300  Q
    |||||||||||||||||||||||  || ||| ||||| ||||||||| |||||||||||||||||||| |||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattatttttta 17384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 58786 - 58684
Alignment:
Q  190 tctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||| |||| |||||||||||||| | | |||| ||||||||||||| ||| | ||||||||| |||| |||||||| |||||| || ||| ||||||||    
T  58786 tctcgatttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 58688  T
Q  290 atta 293  Q
    ||||    
T  58687 atta 58684  T

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Target: scaffold0664 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 4695 - 4768
Alignment:
Q  217 ttgcaagttggagagagatagacac-aaaaaatagatggtggctcctaccactaagtgagtcccaccatcatta 289  Q
    |||||| |||||||||||||||||| ||||||||  |||||| ||||| |||||||||  ||||||||||||||    
T  4695 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 4768  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28316 - 28348
Alignment:
Q  1 gaacgctgacccgtgcgccgcacgggtctttta 33  Q
    |||||| ||||||||||||||||||||||||||    
T  28316 gaacgccgacccgtgcgccgcacgggtctttta 28348  T

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