View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14973_low_4 (Length: 250)

Name: NF14973_low_4
Description: NF14973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14973_low_4
NF14973_low_4
[»] scaffold0702 (2 HSPs)
scaffold0702 (85-201)||(560-682)
scaffold0702 (127-189)||(230-298)
[»] chr6 (41 HSPs)
chr6 (85-201)||(2377744-2377866)
chr6 (85-201)||(2579918-2580040)
chr6 (85-189)||(29518505-29518615)
chr6 (85-189)||(29518922-29519032)
chr6 (85-189)||(32741181-32741291)
chr6 (83-189)||(35210206-35210318)
chr6 (88-201)||(16454565-16454684)
chr6 (85-201)||(2578489-2578610)
chr6 (85-189)||(3409261-3409371)
chr6 (85-201)||(16107668-16107790)
chr6 (89-201)||(32460630-32460748)
chr6 (85-189)||(2378128-2378238)
chr6 (85-189)||(3058228-3058338)
chr6 (89-189)||(26544051-26544157)
chr6 (87-189)||(593757-593865)
chr6 (85-203)||(5832073-5832196)
chr6 (87-189)||(14748386-14748494)
chr6 (32-129)||(22605248-22605345)
chr6 (88-201)||(6999845-6999964)
chr6 (85-198)||(10074409-10074528)
chr6 (88-201)||(16454897-16455016)
chr6 (85-189)||(1846750-1846860)
chr6 (85-198)||(10074037-10074156)
chr6 (87-201)||(2843544-2843665)
chr6 (85-187)||(3415462-3415570)
chr6 (85-198)||(10073662-10073779)
chr6 (85-189)||(3409662-3409772)
chr6 (106-201)||(16108053-16108154)
chr6 (88-185)||(1127366-1127469)
chr6 (89-202)||(1950235-1950354)
chr6 (19-107)||(9362834-9362922)
chr6 (85-198)||(2578881-2578999)
chr6 (87-185)||(9062398-9062501)
chr6 (89-189)||(10911567-10911674)
chr6 (19-127)||(22605000-22605108)
chr6 (79-129)||(21130097-21130147)
chr6 (88-199)||(6071124-6071241)
chr6 (156-201)||(2579228-2579273)
chr6 (85-186)||(2579538-2579645)
chr6 (85-129)||(11637767-11637811)
chr6 (85-141)||(12092528-12092584)
[»] chr7 (57 HSPs)
chr7 (85-201)||(7517570-7517692)
chr7 (85-201)||(30244260-30244382)
chr7 (88-201)||(1085665-1085784)
chr7 (85-201)||(11845183-11845303)
chr7 (85-201)||(7554015-7554137)
chr7 (85-201)||(30245067-30245189)
chr7 (89-201)||(45434626-45434744)
chr7 (85-201)||(47129085-47129207)
chr7 (88-189)||(22566711-22566818)
chr7 (85-201)||(23423-23545)
chr7 (85-189)||(29157567-29157677)
chr7 (85-196)||(6054555-6054672)
chr7 (88-204)||(24177422-24177544)
chr7 (85-201)||(34218080-34218202)
chr7 (85-189)||(37533057-37533166)
chr7 (85-201)||(45433231-45433353)
chr7 (85-201)||(45754706-45754827)
chr7 (88-202)||(118350-118470)
chr7 (83-189)||(36939777-36939889)
chr7 (85-198)||(8128487-8128606)
chr7 (85-202)||(16569185-16569308)
chr7 (85-202)||(16596354-16596477)
chr7 (85-157)||(37533410-37533482)
chr7 (88-201)||(40094823-40094942)
chr7 (85-189)||(14681512-14681622)
chr7 (85-189)||(22567085-22567194)
chr7 (83-201)||(1085292-1085417)
chr7 (85-183)||(19122740-19122843)
chr7 (44-129)||(27391774-27391859)
chr7 (88-201)||(36534833-36534952)
chr7 (85-189)||(40230337-40230447)
chr7 (85-204)||(9901632-9901755)
chr7 (86-189)||(36622962-36623071)
chr7 (41-126)||(48071457-48071542)
chr7 (89-201)||(30032557-30032675)
chr7 (85-155)||(30253534-30253604)
chr7 (89-201)||(24838751-24838870)
chr7 (109-198)||(28301613-28301708)
chr7 (19-129)||(8802568-8802678)
chr7 (124-203)||(30245482-30245567)
chr7 (155-201)||(36967351-36967397)
chr7 (102-201)||(41910657-41910762)
chr7 (102-201)||(43241485-43241590)
chr7 (124-201)||(30255329-30255412)
chr7 (44-129)||(8802272-8802357)
chr7 (85-130)||(21416187-21416232)
chr7 (156-201)||(30244691-30244736)
chr7 (85-141)||(4124134-4124190)
chr7 (88-151)||(28300302-28300366)
chr7 (89-128)||(23569052-23569091)
chr7 (155-201)||(20599304-20599350)
chr7 (129-200)||(36109007-36109084)
chr7 (156-189)||(14681289-14681322)
chr7 (85-130)||(21619091-21619136)
chr7 (85-130)||(36675651-36675696)
chr7 (85-138)||(37167840-37167893)
chr7 (89-189)||(41854637-41854742)
[»] chr5 (58 HSPs)
chr5 (83-185)||(41170640-41170748)
chr5 (85-201)||(15370089-15370211)
chr5 (85-202)||(40296361-40296484)
chr5 (85-201)||(26074602-26074724)
chr5 (88-189)||(18603169-18603276)
chr5 (89-189)||(32487396-32487501)
chr5 (86-201)||(6224186-6224307)
chr5 (88-198)||(13415809-13415925)
chr5 (85-207)||(25327919-25328047)
chr5 (88-201)||(299479-299598)
chr5 (85-198)||(26074192-26074311)
chr5 (100-201)||(26075223-26075330)
chr5 (85-202)||(42405642-42405765)
chr5 (85-189)||(36492263-36492373)
chr5 (22-115)||(5963765-5963858)
chr5 (85-189)||(6500453-6500562)
chr5 (85-189)||(6500825-6500934)
chr5 (86-201)||(12662699-12662820)
chr5 (19-129)||(41341523-41341633)
chr5 (85-157)||(9498700-9498772)
chr5 (85-198)||(41632775-41632894)
chr5 (102-199)||(42508604-42508707)
chr5 (85-189)||(3295061-3295170)
chr5 (88-201)||(34753074-34753193)
chr5 (85-189)||(35150009-35150118)
chr5 (89-184)||(11417027-11417128)
chr5 (88-201)||(26074830-26074950)
chr5 (88-198)||(36568616-36568732)
chr5 (19-115)||(41340361-41340456)
chr5 (85-189)||(624198-624308)
chr5 (85-189)||(27502082-27502192)
chr5 (19-126)||(34103625-34103732)
chr5 (89-188)||(3295395-3295498)
chr5 (88-198)||(1028566-1028682)
chr5 (85-130)||(13042606-13042651)
chr5 (88-153)||(15370446-15370511)
chr5 (85-179)||(33747783-33747883)
chr5 (89-198)||(36521946-36522061)
chr5 (88-189)||(29549304-29549411)
chr5 (89-199)||(36527145-36527249)
chr5 (85-188)||(36522283-36522392)
chr5 (85-130)||(13112604-13112649)
chr5 (88-157)||(26590959-26591028)
chr5 (87-201)||(35914839-35914959)
chr5 (89-186)||(38427553-38427655)
chr5 (89-198)||(13786051-13786166)
chr5 (117-189)||(26074320-26074398)
chr5 (156-198)||(39309677-39309719)
chr5 (90-188)||(2411010-2411114)
chr5 (156-189)||(5723914-5723947)
chr5 (156-201)||(35150737-35150782)
chr5 (156-201)||(35151028-35151073)
chr5 (154-188)||(13785730-13785764)
chr5 (85-139)||(32445943-32445997)
chr5 (156-201)||(300949-300994)
chr5 (156-201)||(26900093-26900138)
chr5 (159-199)||(31509615-31509655)
chr5 (102-190)||(42524718-42524811)
[»] chr1 (56 HSPs)
chr1 (85-199)||(17294569-17294689)
chr1 (85-189)||(44290504-44290614)
chr1 (85-201)||(37556101-37556223)
chr1 (85-201)||(26661568-26661690)
chr1 (85-201)||(34364915-34365037)
chr1 (85-189)||(44290870-44290981)
chr1 (85-189)||(3550722-3550832)
chr1 (85-189)||(29798201-29798311)
chr1 (85-204)||(37850646-37850771)
chr1 (85-188)||(50052069-50052178)
chr1 (85-199)||(41157367-41157487)
chr1 (85-201)||(26661944-26662066)
chr1 (89-201)||(31767211-31767329)
chr1 (85-189)||(32594762-32594872)
chr1 (89-201)||(34364497-34364615)
chr1 (85-201)||(41156981-41157103)
chr1 (102-189)||(41142374-41142467)
chr1 (103-201)||(41184489-41184593)
chr1 (87-200)||(40082398-40082516)
chr1 (89-201)||(11977270-11977388)
chr1 (85-189)||(41759485-41759595)
chr1 (91-202)||(34649427-34649544)
chr1 (88-186)||(3537648-3537752)
chr1 (88-198)||(22077544-22077660)
chr1 (85-201)||(39066246-39066368)
chr1 (118-189)||(3537226-3537303)
chr1 (85-189)||(5320011-5320121)
chr1 (85-183)||(14318875-14318979)
chr1 (85-199)||(38804401-38804521)
chr1 (89-187)||(9955911-9956017)
chr1 (89-157)||(22077160-22077228)
chr1 (85-198)||(24600360-24600479)
chr1 (85-189)||(48588534-48588644)
chr1 (88-199)||(3875380-3875497)
chr1 (85-189)||(45494020-45494135)
chr1 (88-157)||(5575144-5575213)
chr1 (88-152)||(66136-66200)
chr1 (19-111)||(25293565-25293657)
chr1 (85-153)||(44043818-44043886)
chr1 (117-201)||(21378119-21378209)
chr1 (92-199)||(66525-66638)
chr1 (85-200)||(37555721-37555841)
chr1 (122-189)||(45084384-45084457)
chr1 (85-201)||(45839617-45839743)
chr1 (88-157)||(22077878-22077946)
chr1 (88-136)||(32168747-32168795)
chr1 (88-198)||(19283504-19283620)
chr1 (91-189)||(30630690-30630794)
chr1 (156-201)||(35154162-35154207)
chr1 (100-181)||(5528815-5528902)
chr1 (159-198)||(22077248-22077287)
chr1 (89-199)||(22793270-22793387)
chr1 (103-141)||(41184152-41184190)
chr1 (159-189)||(50051777-50051807)
chr1 (120-157)||(4956231-4956268)
chr1 (85-126)||(11977015-11977056)
[»] chr2 (59 HSPs)
chr2 (88-201)||(15880253-15880372)
chr2 (85-201)||(6421375-6421497)
chr2 (85-189)||(36178651-36178761)
chr2 (83-189)||(37106190-37106302)
chr2 (88-189)||(14745716-14745823)
chr2 (85-201)||(28254283-28254405)
chr2 (88-201)||(36005929-36006047)
chr2 (92-201)||(38796673-38796788)
chr2 (88-189)||(41283524-41283631)
chr2 (89-189)||(962600-962706)
chr2 (85-189)||(5542671-5542781)
chr2 (85-189)||(5543044-5543154)
chr2 (86-198)||(28531361-28531479)
chr2 (85-189)||(37105926-37106036)
chr2 (85-201)||(40733507-40733629)
chr2 (88-185)||(14745343-14745446)
chr2 (89-201)||(31468800-31468914)
chr2 (91-189)||(35580776-35580879)
chr2 (89-201)||(6712966-6713085)
chr2 (85-198)||(37632643-37632762)
chr2 (88-189)||(42514651-42514758)
chr2 (85-204)||(15511541-15511664)
chr2 (88-195)||(29874072-29874185)
chr2 (90-189)||(36178320-36178425)
chr2 (88-198)||(40679678-40679794)
chr2 (85-186)||(33731653-33731760)
chr2 (86-157)||(36178218-36178289)
chr2 (90-201)||(16542439-16542556)
chr2 (119-201)||(38796298-38796386)
chr2 (85-157)||(6422150-6422222)
chr2 (109-201)||(31899496-31899594)
chr2 (83-183)||(37895105-37895211)
chr2 (85-201)||(40733873-40733994)
chr2 (85-135)||(6421793-6421843)
chr2 (122-189)||(7598611-7598684)
chr2 (88-198)||(5367448-5367564)
chr2 (156-201)||(6421294-6421339)
chr2 (156-201)||(36785686-36785731)
chr2 (89-198)||(33561501-33561616)
chr2 (85-189)||(1769894-1770004)
chr2 (90-157)||(9231289-9231356)
chr2 (88-199)||(30313170-30313286)
chr2 (88-199)||(30323456-30323573)
chr2 (87-157)||(31259664-31259734)
chr2 (156-201)||(3673075-3673120)
chr2 (156-201)||(29676893-29676938)
chr2 (85-157)||(7598268-7598340)
chr2 (85-141)||(36784306-36784362)
chr2 (100-155)||(31385779-31385834)
chr2 (85-180)||(40163418-40163520)
chr2 (85-135)||(6421688-6421738)
chr2 (102-198)||(16590881-16590978)
chr2 (89-155)||(29873587-29873653)
chr2 (156-201)||(3672709-3672754)
chr2 (149-198)||(33954377-33954426)
chr2 (85-125)||(3672773-3672813)
chr2 (89-141)||(3673124-3673176)
chr2 (89-157)||(23346277-23346344)
chr2 (93-133)||(35580494-35580534)
[»] chr4 (74 HSPs)
chr4 (85-201)||(25483326-25483448)
chr4 (83-201)||(1731689-1731813)
chr4 (85-201)||(34646693-34646815)
chr4 (85-189)||(49880162-49880272)
chr4 (88-201)||(4955364-4955483)
chr4 (88-201)||(22183311-22183430)
chr4 (100-201)||(52884877-52884984)
chr4 (85-189)||(3340809-3340919)
chr4 (85-201)||(10245910-10246031)
chr4 (85-201)||(22028005-22028127)
chr4 (85-198)||(36629230-36629349)
chr4 (85-189)||(50630799-50630909)
chr4 (89-189)||(54017643-54017749)
chr4 (85-189)||(55933168-55933278)
chr4 (85-188)||(49302907-49303018)
chr4 (85-202)||(36608705-36608828)
chr4 (85-201)||(36572009-36572131)
chr4 (85-201)||(39404388-39404510)
chr4 (85-201)||(54936190-54936308)
chr4 (85-199)||(41707509-41707628)
chr4 (85-198)||(52884688-52884808)
chr4 (85-198)||(39792904-39793023)
chr4 (85-189)||(41370359-41370469)
chr4 (85-189)||(50002428-50002538)
chr4 (85-201)||(50459711-50459833)
chr4 (83-198)||(20825829-20825950)
chr4 (85-176)||(54108928-54109024)
chr4 (88-198)||(2740693-2740809)
chr4 (88-189)||(2741073-2741180)
chr4 (89-198)||(3244499-3244614)
chr4 (83-182)||(44620362-44620467)
chr4 (85-176)||(45496820-45496917)
chr4 (40-129)||(1868119-1868208)
chr4 (89-189)||(34004633-34004737)
chr4 (87-189)||(44620662-44620769)
chr4 (85-157)||(18932793-18932865)
chr4 (85-201)||(22028413-22028537)
chr4 (90-198)||(54741227-54741341)
chr4 (83-157)||(44621042-44621116)
chr4 (88-141)||(31691208-31691261)
chr4 (103-201)||(49076510-49076614)
chr4 (89-189)||(16888864-16888970)
chr4 (85-189)||(16889580-16889690)
chr4 (88-196)||(39404013-39404127)
chr4 (88-201)||(43174496-43174616)
chr4 (89-201)||(54017750-54017870)
chr4 (85-157)||(54108576-54108649)
chr4 (89-141)||(3271843-3271895)
chr4 (88-185)||(6975503-6975606)
chr4 (85-141)||(23817725-23817781)
chr4 (89-157)||(32941171-32941239)
chr4 (89-201)||(3341118-3341236)
chr4 (89-201)||(4390149-4390267)
chr4 (87-130)||(10396483-10396526)
chr4 (89-185)||(20826223-20826325)
chr4 (108-157)||(10246387-10246436)
chr4 (85-130)||(11197293-11197338)
chr4 (156-201)||(19504695-19504740)
chr4 (156-201)||(45489452-45489497)
chr4 (85-141)||(43827496-43827551)
chr4 (85-157)||(49076875-49076946)
chr4 (156-199)||(3700357-3700400)
chr4 (155-201)||(11706641-11706687)
chr4 (89-151)||(18879852-18879914)
chr4 (89-155)||(23556914-23556980)
chr4 (156-201)||(44620934-44620980)
chr4 (85-130)||(922485-922530)
chr4 (101-134)||(29802604-29802637)
chr4 (156-201)||(44620286-44620331)
chr4 (100-141)||(45484775-45484816)
chr4 (156-189)||(50788104-50788137)
chr4 (82-131)||(51681604-51681653)
chr4 (85-141)||(760245-760300)
chr4 (87-134)||(34544169-34544217)
[»] chr8 (60 HSPs)
chr8 (88-201)||(3038339-3038458)
chr8 (85-157)||(20870619-20870691)
chr8 (89-201)||(70324-70441)
chr8 (85-201)||(30359261-30359383)
chr8 (85-201)||(33113413-33113535)
chr8 (85-189)||(3669689-3669799)
chr8 (85-201)||(34834866-34834988)
chr8 (85-201)||(34835199-34835321)
chr8 (88-188)||(147454-147560)
chr8 (85-189)||(3670062-3670172)
chr8 (85-201)||(9309345-9309467)
chr8 (85-201)||(37544536-37544658)
chr8 (85-157)||(9483233-9483305)
chr8 (100-201)||(25561877-25561984)
chr8 (85-201)||(8794101-8794223)
chr8 (85-201)||(30359599-30359721)
chr8 (89-189)||(40518584-40518690)
chr8 (85-189)||(45122103-45122213)
chr8 (87-201)||(9482652-9482770)
chr8 (85-189)||(30441083-30441197)
chr8 (88-199)||(40518061-40518180)
chr8 (87-196)||(1513963-1514078)
chr8 (89-189)||(5420653-5420759)
chr8 (89-201)||(8918814-8918932)
chr8 (85-201)||(43274825-43274947)
chr8 (89-201)||(45121706-45121823)
chr8 (83-201)||(6876906-6877031)
chr8 (83-157)||(18372038-18372112)
chr8 (88-198)||(9608738-9608854)
chr8 (85-184)||(18371707-18371807)
chr8 (86-187)||(18380064-18380171)
chr8 (85-157)||(34835515-34835587)
chr8 (85-157)||(34835781-34835853)
chr8 (88-189)||(45121959-45122066)
chr8 (88-157)||(9507822-9507891)
chr8 (88-157)||(9609125-9609194)
chr8 (88-157)||(32305517-32305586)
chr8 (88-157)||(45122664-45122733)
chr8 (100-198)||(9308970-9309076)
chr8 (85-157)||(40579552-40579624)
chr8 (101-198)||(41972151-41972254)
chr8 (89-189)||(1013921-1014027)
chr8 (85-189)||(1014291-1014401)
chr8 (85-136)||(5915928-5915979)
chr8 (90-188)||(32640583-32640682)
chr8 (119-184)||(41416251-41416322)
chr8 (93-189)||(45123008-45123108)
chr8 (75-126)||(12156694-12156745)
chr8 (155-201)||(147819-147865)
chr8 (85-189)||(6731906-6732007)
chr8 (125-188)||(18372785-18372854)
chr8 (85-134)||(27856194-27856243)
chr8 (85-129)||(147888-147932)
chr8 (156-188)||(18372494-18372526)
chr8 (85-136)||(6651555-6651606)
chr8 (100-155)||(40991795-40991850)
chr8 (85-115)||(8919190-8919220)
chr8 (125-188)||(18372342-18372411)
chr8 (89-157)||(18372656-18372720)
chr8 (155-200)||(5915863-5915908)
[»] chr3 (67 HSPs)
chr3 (85-201)||(22304001-22304116)
chr3 (85-198)||(35946515-35946634)
chr3 (85-201)||(43346837-43346959)
chr3 (85-201)||(37990685-37990807)
chr3 (89-201)||(52634666-52634783)
chr3 (85-201)||(32462946-32463069)
chr3 (88-201)||(29644951-29645070)
chr3 (85-201)||(12114608-12114730)
chr3 (85-189)||(15772856-15772966)
chr3 (85-189)||(22304571-22304681)
chr3 (85-201)||(37991023-37991145)
chr3 (85-201)||(45901703-45901826)
chr3 (85-199)||(54017862-54017982)
chr3 (85-198)||(8327897-8328016)
chr3 (89-202)||(25739475-25739594)
chr3 (88-189)||(29644630-29644737)
chr3 (85-189)||(39389072-39389182)
chr3 (85-201)||(39914242-39914364)
chr3 (89-201)||(42342438-42342556)
chr3 (88-201)||(32462607-32462727)
chr3 (91-201)||(32589694-32589809)
chr3 (88-198)||(33803301-33803417)
chr3 (91-189)||(1634366-1634471)
chr3 (89-201)||(15773182-15773300)
chr3 (85-189)||(54018244-54018354)
chr3 (85-184)||(3135119-3135224)
chr3 (83-139)||(22303703-22303759)
chr3 (85-201)||(49336733-49336855)
chr3 (85-201)||(53577354-53577476)
chr3 (49-127)||(16868393-16868471)
chr3 (91-189)||(21832395-21832499)
chr3 (88-157)||(41359814-41359883)
chr3 (89-182)||(39935005-39935104)
chr3 (85-189)||(4823657-4823767)
chr3 (85-201)||(31190007-31190121)
chr3 (90-189)||(39336280-39336385)
chr3 (32-129)||(17731897-17731994)
chr3 (32-129)||(19033128-19033225)
chr3 (85-199)||(45395699-45395819)
chr3 (85-198)||(9240142-9240261)
chr3 (85-201)||(3135500-3135629)
chr3 (156-203)||(11661523-11661570)
chr3 (85-201)||(53118021-53118142)
chr3 (88-198)||(47964567-47964683)
chr3 (89-198)||(33175711-33175829)
chr3 (88-141)||(42342139-42342192)
chr3 (65-129)||(16870985-16871049)
chr3 (88-201)||(25755384-25755503)
chr3 (156-204)||(43346637-43346685)
chr3 (120-189)||(51886563-51886638)
chr3 (121-189)||(50612534-50612608)
chr3 (20-126)||(16869778-16869884)
chr3 (75-129)||(17735027-17735081)
chr3 (75-129)||(19036296-19036350)
chr3 (95-157)||(33362349-33362411)
chr3 (87-141)||(52634996-52635050)
chr3 (85-127)||(54017594-54017636)
chr3 (156-189)||(22304248-22304281)
chr3 (100-157)||(44160605-44160662)
chr3 (85-130)||(48127861-48127906)
chr3 (159-199)||(12747878-12747918)
chr3 (83-155)||(46546369-46546441)
chr3 (88-155)||(12749211-12749278)
chr3 (85-181)||(42584868-42584970)
chr3 (156-189)||(37726506-37726539)
chr3 (85-130)||(53596027-53596072)
chr3 (85-130)||(53596342-53596387)
[»] scaffold0078 (2 HSPs)
scaffold0078 (85-199)||(5349-5469)
scaffold0078 (85-201)||(4972-5094)
[»] scaffold0391 (3 HSPs)
scaffold0391 (85-201)||(1152-1274)
scaffold0391 (85-150)||(1737-1802)
scaffold0391 (156-201)||(3108-3153)
[»] scaffold0734 (2 HSPs)
scaffold0734 (107-201)||(5767-5867)
scaffold0734 (85-201)||(5386-5509)
[»] scaffold0504 (1 HSPs)
scaffold0504 (120-201)||(10192-10279)
[»] scaffold0171 (1 HSPs)
scaffold0171 (102-201)||(17519-17624)
[»] scaffold0014 (1 HSPs)
scaffold0014 (50-127)||(197799-197874)
[»] scaffold0113 (1 HSPs)
scaffold0113 (159-199)||(39830-39870)
[»] scaffold0027 (1 HSPs)
scaffold0027 (85-157)||(47400-47472)


Alignment Details
Target: scaffold0702 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 560 - 682
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      ||||| |||||||||||||||||    
T  560 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatata 659  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||    
T  660 actcacacttgtgcacaacaaca 682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 230 - 298
Alignment:
Q  127 ggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttg 189  Q
    ||||||||||||||| || ||||||||||||      ||||||||||||||||||||||||||||||||    
T  230 ggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 2377866 - 2377744
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      ||||| |||||||||||||||||    
T  2377866 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatata 2377767  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||    
T  2377766 actcacacttgtgcacaacaaca 2377744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 2579918 - 2580040
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||      |||||||||||||||||||||||    
T  2579918 acaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatata 2580017  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  2580018 actcacacttgcacacaacaaca 2580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 29518615 - 29518505
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  29518615 acaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatata 29518516  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  29518515 actcacacttg 29518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 29519032 - 29518922
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  29519032 acaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatata 29518933  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  29518932 actcacacttg 29518922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 32741291 - 32741181
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  32741291 acaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatata 32741192  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  32741191 actcacacttg 32741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 35210318 - 35210206
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||      |||||||||||||| ||||||    
T  35210318 aaacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacata 35210219  T
Q  177 taactcacacttg 189  Q
    |||||||||||||    
T  35210218 taactcacacttg 35210206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 16454684 - 16454565
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||| |      ||||||| ||||||||||| ||||||    
T  16454684 ccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataact 16454585  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||| ||||||||||    
T  16454584 cacacttgtacacaacaaca 16454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 2578489 - 2578610
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| |  ||||||||||      ||||||||| |||||||||||||    
T  2578489 acaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatata 2578587  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  2578588 actcacacttgtacacaacaaca 2578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3409371 - 3409261
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || ||||||||||      ||||||| |||||||||||||||    
T  3409371 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatata 3409272  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3409271 actcacacttg 3409261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 16107790 - 16107668
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| || |||| ||||      |||||||||||||||  |||||||    
T  16107790 acaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatata 16107691  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  16107690 actcacacttgtacacaacaaca 16107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 32460630 - 32460748
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||||||||| || ||||||||||      |||||| ||||||||||||||||||||    
T  32460630 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactc 32460729  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||| | ||||||||||||    
T  32460730 acacctttgcacaacaaca 32460748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 2378238 - 2378128
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||| ||||| | |||||||||||| | ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  2378238 acaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatata 2378139  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  2378138 actcacacttg 2378128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3058338 - 3058228
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||      |||||||||||||||||||||||    
T  3058338 acaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatata 3058239  T
Q  179 actcacacttg 189  Q
    ||| |||||||    
T  3058238 actaacacttg 3058228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 26544157 - 26544051
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||||||||| |  ||||||||||      |||||||||||||||||||||||||||    
T  26544157 cacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactc 26544058  T
Q  183 acacttg 189  Q
    |||||||    
T  26544057 acacttg 26544051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 593757 - 593865
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataac 180  Q
    |||||||| ||| |||||||||||||||||| |||||||| |||||||||||||| || ||||||||||      ||||||||||||||||||||| |||    
T  593757 accacactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaac 593856  T
Q  181 tcacacttg 189  Q
    |||||||||    
T  593857 tcacacttg 593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 5832073 - 5832196
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||| ||| |||||| |||||||  |||| ||||||||||||||||||||| || ||||||||||||      |||||| ||||||||||||||    
T  5832073 acaccacacttttacccaaaatcttaaggg-gtggctttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtgggacatata 5832171  T
Q  179 actcacacttgtgcacaacaacagt 203  Q
    ||| |||||||||||||||||||||    
T  5832172 acttacacttgtgcacaacaacagt 5832196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 14748386 - 14748494
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataac 180  Q
    |||||||||||| |||||||||||| ||| || ||||||||||||||||| |||| || ||||||||||      |||||||||||||||||||||||||    
T  14748386 accacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataac 14748485  T
Q  181 tcacacttg 189  Q
    |||||||||    
T  14748486 tcacacttg 14748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 22605248 - 22605345
Alignment:
Q  32 gggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    |||||||| || ||||| |||||||||||| |||| ||| || |||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  22605248 gggagccccgggagcggcaatgggccaaacgtccaagaccataagagacttaaacaccacattcttacccaaaaccttaaggcaatgggtttatgggt 22605345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 6999845 - 6999964
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttca------acctttttatccgatgtgggacatataact 181  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| || ||||||      || |||||||||||||| ||||||||||||    
T  6999845 ccacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataact 6999944  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||| | ||||| ||||    
T  6999945 cacacttatacacaataaca 6999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 10074409 - 10074528
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || |||||||||      ||| ||||||||||||||| | ||    
T  10074409 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctcta 10074508  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  10074509 actcacacttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 16455016 - 16454897
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| | |||||||||||||| |||||||| || ||||||||||      ||||||| ||||||||||| ||||||    
T  16455016 ccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtgggacacataact 16454917  T
Q  182 cacacttgtgcacaacaaca 201  Q
    |||| |||| ||||||||||    
T  16454916 cacatttgtacacaacaaca 16454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 1846860 - 1846750
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| || ||||||||||      |||||||||||||| |||||| |    
T  1846860 acaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacataga 1846761  T
Q  179 actcacacttg 189  Q
    | |||||||||    
T  1846760 attcacacttg 1846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 10074037 - 10074156
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttt-tatccgatgtgggacatata 178  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||     ||||| |||||||||||||| |||||    
T  10074037 acaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatata 10074136  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||| ||||  |||||||    
T  10074137 actcacccttgcacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 2843665 - 2843544
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttat-gggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataa 179  Q
    |||||||||||| |||||||||||||||| || |||||| |||||||||||||||| || |||||||| |      ||||||||||||||  ||||||||    
T  2843665 accacactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataa 2843566  T
Q  180 ctcacacttgtgcacaacaaca 201  Q
    |||||| |||||||||||||||    
T  2843565 ctcacaattgtgcacaacaaca 2843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 3415570 - 3415462
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||||||||  | ||||||||||      ||||||  |||||||||||||||    
T  3415570 acaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatata 3415471  T
Q  179 actcacact 187  Q
    |||||||||    
T  3415470 actcacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 10073662 - 10073779
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct----ttttatccgatgtgggacatataac 180  Q
    |||||||||||||| |||||| |||||| || || |||||||| ||||||||||||| || ||||||||||    |||| ||||||||||||||||||||    
T  10073662 acaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttacttttctccgatgtgggacatataac 10073761  T
Q  181 tcacacttgtgcacaaca 198  Q
    | |||||||  |||||||    
T  10073762 taacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3409772 - 3409662
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||  | |||||| ||||||||||||||||||||||||| ||||||||||| |      ||||||| ||||||| |||||||    
T  3409772 acaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatata 3409673  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3409672 actcacacttg 3409662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 16108154 - 16108053
Alignment:
Q  106 ccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgcacaacaa 199  Q
    |||||||||| ||||||||||||||||||||||||| || |||||||| |      ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  16108154 ccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaa 16108055  T
Q  200 ca 201  Q
    ||    
T  16108054 ca 16108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 1127469 - 1127366
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||| | |||||||||| |||||||||||||| || ||||||||||      ||||| ||||||||||| ||||||||    
T  1127469 ccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtgggatatataact 1127370  T
Q  182 caca 185  Q
    ||||    
T  1127369 caca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 1950235 - 1950354
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    ||||||||||  ||||||||||||||| | | ||||||| ||||||||||| | || ||||||||||||      |||||||||||||||||||||||||    
T  1950235 cacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactc 1950334  T
Q  183 acacttgtgcacaacaacag 202  Q
    |||||| | | |||||||||    
T  1950335 acacttatacgcaacaacag 1950354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 9362834 - 9362922
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaacc 107  Q
    ||||||||||||||||||||| || ||||| |||||| ||||| |||||||| || |||||||||||||||| ||| ||| ||||||||    
T  9362834 gttggggagtccagggagccccgggagcggcaatgggacaaacgtccaggaccataagagacttaaacaccatactattacccaaaacc 9362922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 2578881 - 2578999
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttttatccgatgtgggacatataa 179  Q
    |||||||||||||| |||||||||||||| | || |||||||| |||||||| |||| || | ||||||     |||||||||||||| |||||||||||    
T  2578881 acaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttttatccgatgagggacatataa 2578980  T
Q  180 ctcacacttgtgcacaaca 198  Q
     |||||||||  |||||||    
T  2578981 atcacacttgctcacaaca 2578999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 9062398 - 9062501
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataac 180  Q
    |||||||| ||| ||||||| ||||| || || ||||||| |||||||||||||| |||||||||||||      |||||||||||||||||||||||||    
T  9062398 accacacttttacccaaaac-ttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataac 9062496  T
Q  181 tcaca 185  Q
    |||||    
T  9062497 tcaca 9062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 10911674 - 10911567
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc-------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||| |||||||| || ||||||| |||||||||||||| || |||||||||       |||||||| ||||| ||||||||||||    
T  10911674 cacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataact 10911575  T
Q  182 cacacttg 189  Q
    ||||||||    
T  10911574 cacacttg 10911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 22605000 - 22605108
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtg 118  Q
    ||||||||| || ||||||||  ||||||| |||||||||||  |||| ||| || ||||| ||||||||| ||||||||||||||| ||||||  | ||    
T  22605000 gttggggagcccggggagccccagaagcggcaatgggccaaatgtccaagaccataagagagttaaacacctcactcttatccaaaagcttaagaaaatg 22605099  T
Q  119 ggtttatgg 127  Q
    |||||||||    
T  22605100 ggtttatgg 22605108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 21130097 - 21130147
Alignment:
Q  79 acttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  21130097 acttaaacaccacactcttatccaaaaccttaaggcaatggatttatgggt 21130147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 6071241 - 6071124
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    |||||||||||||||||| ||||||||| || |||||||| || ||| |||||| |  |||||||||      ||| ||| | |||||||||||||||||    
T  6071241 ccacactcttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttttctattcaatgtgggacatataact 6071142  T
Q  182 cacacttgtgcacaacaa 199  Q
    ||||||||  ||||||||    
T  6071141 cacacttgcacacaacaa 6071124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 2579228 - 2579273
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  2579228 ttttatccgatgtgggacatataactaacacttgtacacaacaaca 2579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 2579538 - 2579645
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||| ||| ||| |||||||||||||||| || ||||||||| |||||||||||| || | | | |||      ||||| ||||||||||||||||||    
T  2579538 acaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatata 2579637  T
Q  179 actcacac 186  Q
    ||||||||    
T  2579638 actcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 11637767 - 11637811
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||||||||||||||| |||||| || |||||||||||||    
T  11637767 acaccacactcttatccaaaatcttaagacaatgggtttatgggt 11637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 12092528 - 12092584
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||| |||||  ||||||||||||||| || |||||||| |||||| ||||||    
T  12092528 acaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctctcacttat 12092584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 7517692 - 7517570
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  7517692 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatata 7517593  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  7517592 actcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 30244382 - 30244260
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| || | ||||||||      |||||||||||||||||||||||    
T  30244382 acaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatata 30244283  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  30244282 actcacacttgtacacaacaaca 30244260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 1085665 - 1085784
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||      ||||||||||||||||||||||||||    
T  1085665 ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataact 1085764  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||  ||||||||||    
T  1085765 cacacttgcacacaacaaca 1085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 11845303 - 11845183
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||      ||||||||||||||| |||||||    
T  11845303 acaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatata 11845204  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||  ||||||||||||||||||    
T  11845203 act--cacttgtgcacaacaaca 11845183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 7554137 - 7554015
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  7554137 acaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatata 7554038  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  7554037 actcacacttgcacacaacaaca 7554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 30245189 - 30245067
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||||||||| |||||||||| || ||||||||||      ||||||||||||||| |||||||    
T  30245189 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatata 30245090  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  30245089 actcacacttgtacacaacaaca 30245067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 45434744 - 45434626
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||| || |||||||||      |||||||||||||||||||||||||||     
T  45434744 cacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataactt 45434645  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||| ||||||||||    
T  45434644 acacttgtacacaacaaca 45434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 47129207 - 47129085
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||| || |||||||||||| ||  ||||||||||||||||||||||||| ||| |||||||||      |||||||||||||| ||||||||    
T  47129207 acaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatata 47129108  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||    
T  47129107 actcacacttgtgcacaacaaca 47129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 22566711 - 22566818
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||| |||    
T  22566711 ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattact 22566810  T
Q  182 cacacttg 189  Q
    ||||||||    
T  22566811 cacacttg 22566818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 23423 - 23545
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| || ||||||||||      || |||||||||||| |||||||    
T  23423 acaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatata 23522  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    ||||||| |||  ||||||||||    
T  23523 actcacaattgcacacaacaaca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 29157677 - 29157567
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||| || ||||||||||      ||||||||| |||||||||||||    
T  29157677 acaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatata 29157578  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  29157577 actcacacttg 29157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 6054672 - 6054555
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || |||||||| |      |||||||||||||| ||||||||    
T  6054672 acaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatata 6054573  T
Q  179 actcacacttgtgcacaa 196  Q
    ||| |||||||| |||||    
T  6054572 actaacacttgtccacaa 6054555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 24177544 - 24177422
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| | ||||| |||||||| ||||||||||||||| ||||||||| || |||||| |||      ||||||||||||||||||||||||||    
T  24177544 ccacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataact 24177445  T
Q  182 cacacttgtgcacaacaacagtt 204  Q
    || |||||  |||||||||||||    
T  24177444 catacttgcacacaacaacagtt 24177422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 34218080 - 34218202
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttca------acctttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||||||| |||||| || ||||||      || ||||||||||||||| ||||||||    
T  34218080 acaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatata 34218179  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    ||||||| |||| ||||||||||    
T  34218180 actcacatttgtacacaacaaca 34218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 37533057 - 37533166
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||| ||| |||||||||||||||| || |||||||||||||||||||||| || ||||||||||      |||||||| ||||||||||||||    
T  37533057 acaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatata 37533155  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  37533156 actcacacttg 37533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 45433353 - 45433231
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| ||||||||| | |||||||| || ||||||||||| || ||||||||||      |||||||||||||||  ||||||    
T  45433353 acaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatata 45433254  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  45433253 actcacacttgtacacaacaaca 45433231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 45754827 - 45754706
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  |||||||||| ||| |||||||||| || |||||||| |      ||||||||||||| |||||||||    
T  45754827 acaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgt-ggacatata 45754729  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  45754728 actcacacttgtacacaacaaca 45754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 118350 - 118470
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||| || | ||||||||||| |||||||||||||||| |||||||||      ||| |||| ||||||||||||||||||    
T  118350 ccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataact 118449  T
Q  182 cacacttgtgcacaacaacag 202  Q
     |||||||  |||||||||||    
T  118450 tacacttgcacacaacaacag 118470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 36939777 - 36939889
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||| || |||||||| |      |||||| |||| |||||||||    
T  36939777 aaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacata 36939876  T
Q  177 taactcacacttg 189  Q
    |||||||||||||    
T  36939877 taactcacacttg 36939889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 8128487 - 8128606
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||||||||| ||| || |||||||||      ||| |||||||| |||||||||||    
T  8128487 acaccacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatata 8128586  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  8128587 actcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 16569308 - 16569185
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||| || | ||||||||      || ||||||||||| ||||||||    
T  16569308 acaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatata 16569209  T
Q  179 actcacacttgtgcacaacaacag 202  Q
    |||||||||||   ||||||||||    
T  16569208 actcacacttgcatacaacaacag 16569185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 16596354 - 16596477
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||| || | ||||||||      || ||||||||||| ||||||||    
T  16596354 acaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatata 16596453  T
Q  179 actcacacttgtgcacaacaacag 202  Q
    |||||||||||   ||||||||||    
T  16596454 actcacacttgcatacaacaacag 16596477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 37533410 - 37533482
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  37533410 acaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaaccttt 37533482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 40094823 - 40094942
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||||| |  ||||||||||||||||||||||||| || |||| |||||      |||||| ||||||| |||||||||||    
T  40094823 ccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataact 40094922  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||  ||||||||||    
T  40094923 cacacttgcacacaacaaca 40094942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 14681622 - 14681512
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || |||||||||||| |||||||||||  || ||||||||||      ||||||| |||||||||||||||    
T  14681622 acaccacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatata 14681523  T
Q  179 actcacacttg 189  Q
    ||| |||||||    
T  14681522 acttacacttg 14681512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 22567085 - 22567194
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| | |||||||||||||| || |||||||||||||||||||||| || ||||||||||      ||||||||||||| ||||||||     
T  22567085 acaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgt-ggacatatt 22567183  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  22567184 actcacacttg 22567194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 1085292 - 1085417
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacat- 175  Q
    |||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||| || |||||||| |      ||||||||||| ||||||||     
T  1085292 aaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatgggacata 1085391  T
Q  176 ataactcacacttgtgcacaacaaca 201  Q
    | ||||||||||||  ||||||||||    
T  1085392 aaaactcacacttgcacacaacaaca 1085417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 19122843 - 19122740
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||| || ||||||||||      ||||||||||||| |||||||||    
T  19122843 acaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatata 19122745  T
Q  179 actca 183  Q
    |||||    
T  19122744 actca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 27391774 - 27391859
Alignment:
Q  44 agcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||| |||| ||||||| | || |||||| |||||||||||||||||||||||| | |||||||||||||||||| |||||||||    
T  27391774 agcggcaatgagccaaacgttcaagactataagagacttaaacaccacactcttacctaaaaccttaaggcagtggatttatgggt 27391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 36534833 - 36534952
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||||| |  | ||||||||||||||||||||||| || ||||||||||      |||||||||| ||||||||||||| |    
T  36534833 ccacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagt 36534932  T
Q  182 cacacttgtgcacaacaaca 201  Q
     |||||||  ||||||||||    
T  36534933 tacacttgcacacaacaaca 36534952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 40230337 - 40230447
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttca------acctttttatccgatgtgggacatata 178  Q
    |||||| ||| ||| ||||||||||||| |  ||||||||||||||||||||||||| |||||||||      || ||||||| ||||||||||||||||    
T  40230337 acaccagacttttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatata 40230436  T
Q  179 actcacacttg 189  Q
    ||| |||||||    
T  40230437 acttacacttg 40230447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 9901755 - 9901632
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || || |||||||| ||||| ||| ||| |||||||||||||      ||||||||||||| |||||||||    
T  9901755 acaccacactcttacccaaaaccttaagacaatgagtttatggatcctc-tacgtataagatgttcaacctttactgttttatccgatgt-ggacatata 9901658  T
Q  179 actcacacttgtgcacaacaacagtt 204  Q
    |||||||||| | ||||| |||||||    
T  9901657 actcacacttatacacaataacagtt 9901632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 36623071 - 36622962
Alignment:
Q  86 caccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataa 179  Q
    ||||| |||| || |||||||||||||||| ||| ||||||| ||||| ||||||| | ||||| |||||||      ||||||||||||||||||||||    
T  36623071 caccatactcctacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataa 36622972  T
Q  180 ctcacacttg 189  Q
    ||||||||||    
T  36622971 ctcacacttg 36622962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 48071542 - 48071457
Alignment:
Q  41 ggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatg 126  Q
    |||||||| |||||||||||| |||| ||  || ||||||||||||| |||||||||||||||||||||||| || | ||||||||    
T  48071542 ggaagcggcaatgggccaaacgtccaagatcataagagacttaaacatcacactcttatccaaaaccttaagacaataggtttatg 48071457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 30032675 - 30032557
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-ct-----ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||  | ||||||||| | ||||||||||| || |||||||| ||     |||||| ||||||||||||||||||||    
T  30032675 cacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaacacttactcttttattcgatgtgggacatataactc 30032576  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||| ||| | ||||||||    
T  30032575 acacatgtacgcaacaaca 30032557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 30253604 - 30253534
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    |||||||||||||| |||||||||||||||| || |||||||||| ||||||||||| || | ||||||||    
T  30253604 acaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 24838751 - 24838870
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcc-tcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    |||||||||| ||||||||||||| ||  |||||||||| ||| |||||||||| || ||||||||||      |||||| ||||||| |||||||||||    
T  24838751 cacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataact 24838850  T
Q  182 cacacttgtgcacaacaaca 201  Q
     |||||| | ||||||||||    
T  24838851 tacacttatacacaacaaca 24838870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 28301613 - 28301708
Alignment:
Q  109 taaggcagtgggtttatgggtcctcttacttattagatgttca------acctttttatccgatgtgggacatataactcacacttgtgcacaaca 198  Q
    ||||||| ||||||||||||||||||||||||| || ||||||      || ||| ||||||||||| |||||||||||||||||||  |||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 8802678 - 8802568
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtg 118  Q
    ||||||||||||  || |||| |  ||||| |||||| ||||  |||| ||| || |||||||||||||||||||||||| |||||| |||||  |||||    
T  8802678 gttggggagtccgcggtgccccgcgagcggcaatgggtcaaatgtccatgaccataagagacttaaacaccacactcttacccaaaatcttaaaacagtg 8802579  T
Q  119 ggtttatgggt 129  Q
     ||||||||||    
T  8802578 agtttatgggt 8802568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 30245567 - 30245482
Alignment:
Q  124 atgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcacaacaacagt 203  Q
    ||||| |||||||||||| || ||||||||||||      ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  30245567 atgggccctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaacagt 30245482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 36967351 - 36967397
Alignment:
Q  155 tttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  36967351 tttttatccgatgtgagacatataactcacacttgtacacaacaaca 36967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 41910657 - 41910762
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcaca 195  Q
    |||| |||||| || |||||||||||||||||| | |||| || | ||||||||||      |||||||||||||||||||||||||||||||   ||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacaca 41910756  T
Q  196 acaaca 201  Q
    ||||||    
T  41910757 acaaca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 43241590 - 43241485
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcaca 195  Q
    ||||||||||| || |  ||||||| ||||| |||||||| || ||||||||||||      ||||||||||||| ||||||||||||||||||  ||||    
T  43241590 aaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacaca 43241491  T
Q  196 acaaca 201  Q
    ||||||    
T  43241490 acaaca 43241485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 30255412 - 30255329
Alignment:
Q  124 atgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||| |||||||||||| || ||||||||||||      ||||||||||||||||||||||| ||||||||  ||||||||||    
T  30255412 atgggccctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaaca 30255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 8802357 - 8802272
Alignment:
Q  44 agcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||| |||||||||||| |||| ||| || ||||||||||||||||| ||||||  |||||| | ||| || || ||||||||||    
T  8802357 agcggcaatgggccaaacgtccaagaccataagagacttaaacaccacgctcttactcaaaacataaagacaatgagtttatgggt 8802272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 21416187 - 21416232
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  21416187 acaccacactcttacccaaaaccctaaggcaatgggtttatgggtc 21416232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 30244736 - 30244691
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||    
T  30244736 ttttatccaatgtgggacatataactcacacttgcacacaacaaca 30244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 4124134 - 4124190
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||| |||||||||||||||| ||| || |||||| |||||||| ||||||    
T  4124134 acaccacacttttatccaaaaccttaatgcaatgagtttattggtcctctcacttat 4124190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 28300302 - 28300366
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttat-gggtcctcttacttattagatgttca 151  Q
    ||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||||| || ||||||    
T  28300302 ccacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 23569052 - 23569091
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatggg 128  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  23569052 cacactcttacccaaaaccttaaggcaatgggtttatggg 23569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 20599350 - 20599304
Alignment:
Q  155 tttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||||||||||||| |  |||||||||    
T  20599350 tttttatccgatatgggacatataactcacacttatagacaacaaca 20599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 36109007 - 36109084
Alignment:
Q  129 tcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcacaacaac 200  Q
    ||||||||||||| || ||||||||||||      |||||||||||| || ||||||||||||||||  |||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 14681322 - 14681289
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttg 189  Q
    |||||||| |||||||||||||||||||||||||    
T  14681322 ttttatccaatgtgggacatataactcacacttg 14681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 21619091 - 21619136
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||| ||| ||||||||||||| || ||||||||||||||    
T  21619091 acaccacacttttacccaaaaccttaagacaatgggtttatgggtc 21619136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 36675696 - 36675651
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||| |||||||||| | ||||||||||| ||||||||||    
T  36675696 acaccacactattatccaaaatcctaaggcagtggatttatgggtc 36675651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 37167893 - 37167840
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttact 138  Q
    |||||||||||||| ||||||| ||||| || ||| ||||||| ||||||||||    
T  37167893 acaccacactcttacccaaaactttaagtcaatggatttatggatcctcttact 37167840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 41854742 - 41854637
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctt-----tttatccgatgtgggacatataactca 183  Q
    |||||||||| |||||||||||||||| |   ||||| |||| |||| ||||| || |||||||||||     |||  | ||||||||||||||||||||    
T  41854742 cacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacctttactcttttactgatgtgggacatataactca 41854643  T
Q  184 cacttg 189  Q
     |||||    
T  41854642 tacttg 41854637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 41170748 - 41170640
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||      |||||||||||||||||||||    
T  41170748 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacata 41170649  T
Q  177 taactcaca 185  Q
    |||||||||    
T  41170648 taactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 15370211 - 15370089
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||      |||||| ||||||||||||||||    
T  15370211 acaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatata 15370112  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  15370111 actcacacttgcacacaacaaca 15370089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 40296361 - 40296484
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  40296361 acaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatata 40296460  T
Q  179 actcacacttgtgcacaacaacag 202  Q
    |||||||||||  |||| ||||||    
T  40296461 actcacacttgcacacaccaacag 40296484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 26074724 - 26074602
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      ||||||||||| ||| |||||||    
T  26074724 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatata 26074625  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||| ||||    
T  26074624 actcacacttgtacacaaaaaca 26074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 18603169 - 18603276
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      ||||||| ||||||||||||||||||    
T  18603169 ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataact 18603268  T
Q  182 cacacttg 189  Q
    ||||||||    
T  18603269 cacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 32487501 - 32487396
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||      |||||||||||||||||||||||||||    
T  32487501 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactta-taggtgttcaacctttactattttatccgatgtgggacatataactc 32487403  T
Q  183 acacttg 189  Q
    |||||||    
T  32487402 acacttg 32487396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 6224307 - 6224186
Alignment:
Q  86 caccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataa 179  Q
    ||||||||||||| | |||||||||||||  || |||||||||||||||||||||| || ||||||||||      |||||||||| |||||||||||||    
T  6224307 caccacactcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataa 6224208  T
Q  180 ctcacacttgtgcacaacaaca 201  Q
    ||||||||||| ||||||||||    
T  6224207 ctcacacttgtacacaacaaca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 13415809 - 13415925
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctt------tttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||| | | ||||||||||||||||||||||| || |||||||||||      |||||||||||||||||||||||||    
T  13415809 ccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataact 13415908  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||  |||||||    
T  13415909 cacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 25328047 - 25327919
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| || |||||||| |      ||||||||||||| |||||||||    
T  25328047 acaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtaggacatata 25327948  T
Q  179 actcacacttgtgcacaacaacagttcta 207  Q
    ||||||||||   ||||||||||| ||||    
T  25327947 actcacacttagacacaacaacaggtcta 25327919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 299598 - 299479
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataact 181  Q
    |||||||||||  ||||||||||||||  || ||||||||||| |||||||||| || ||||||||||||      ||||||||||||||||||||||||    
T  299598 ccacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataact 299499  T
Q  182 cacacttgtgcacaacaaca 201  Q
    |||||||| |||||||||||    
T  299498 cacacttgcgcacaacaaca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 26074192 - 26074311
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||| || |||||||||      ||||||||||||||| ||||||||    
T  26074192 acaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatata 26074291  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  26074292 actcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 26075223 - 26075330
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgca 193  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||| ||||||||| |||||||||| ||    
T  26075223 ccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtaca 26075322  T
Q  194 caacaaca 201  Q
    ||||||||    
T  26075323 caacaaca 26075330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 42405642 - 42405765
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| | |||||||| ||||| |||||| | || ||||||||||      ||||||||||||| |||||||||    
T  42405642 acaccacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatata 42405741  T
Q  179 actcacacttgtgcacaacaacag 202  Q
    |||||||||||| |||||||||||    
T  42405742 actcacacttgtacacaacaacag 42405765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 36492263 - 36492373
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||||||||||||| |||| | || |||||| ||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  36492263 acaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatata 36492362  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  36492363 actcacacttg 36492373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 5963858 - 5963765
Alignment:
Q  22 ggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggca 115  Q
    ||||||||| |||||||| || ||||| |||||| ||||| |||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  5963858 ggggagtccggggagccccgggagcggcaatgggtcaaacgtccaggaccataagagacttaaacaccacactcttacccaaaaccttaaggca 5963765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 6500562 - 6500453
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| || ||||||||||      ||||||||||||| |||||||||    
T  6500562 acaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatata 6500464  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  6500463 actcacacttg 6500453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 6500934 - 6500825
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||| ||| |||| || ||||||||||      ||||||||||||| |||||||||    
T  6500934 acaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgt-ggacatata 6500836  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  6500835 actcacacttg 6500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 12662699 - 12662820
Alignment:
Q  86 caccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataa 179  Q
    ||||||||||||| |||||| |||||| || ||| |||||||||  |||||||||| | |||||||||||||      ||||||||||||||||||||||    
T  12662699 caccacactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataa 12662798  T
Q  180 ctcacacttgtgcacaacaaca 201  Q
    ||||||||||  ||||||||||    
T  12662799 ctcacacttgcacacaacaaca 12662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 41341633 - 41341523
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtg 118  Q
    |||||||||| | ||||||||  | ||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||| | |||||||||||||| ||    
T  41341633 gttggggagtacggggagccccaggagcggcaatgggccaaacgtccaggactataagagacttaaacaccacattcttaccaaaaaccttaaggcaatg 41341534  T
Q  119 ggtttatgggt 129  Q
     || |||||||    
T  41341533 agtgtatgggt 41341523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 9498700 - 9498772
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  9498700 acaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttt 9498772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 41632894 - 41632775
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||| || |||||||||      ||| ||||||||||| ||||||||    
T  41632894 acaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatata 41632795  T
Q  179 actcacacttgtgcacaaca 198  Q
    ||| |||||||  |||||||    
T  41632794 acttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 42508707 - 42508604
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactcacacttgtgcaca 195  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| ||||      ||| |||||||||||||| |||||| |||||||||| ||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtacaca 42508608  T
Q  196 acaa 199  Q
    ||||    
T  42508607 acaa 42508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 3295061 - 3295170
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||| || ||||||||| |||||| |||||||||||||| |||||||||| || ||||||||||      ||||||||||||||||||||||     
T  3295061 acaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatat- 3295159  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3295160 actcacacttg 3295170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 34753074 - 34753193
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttt-tatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| | |||||||||||| |||||||||| || ||||||||     ||||| ||||| |||||||||||||||||    
T  34753074 ccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataact 34753173  T
Q  182 cacacttgtgcacaacaaca 201  Q
     ||| |||| ||||||||||    
T  34753174 tacatttgtacacaacaaca 34753193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 35150118 - 35150009
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||| ||| ||||||||||||| || ||| ||||||||| ||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  35150118 acaccacacttttacccaaaaccttaagacaatggatttatgggt-ctcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatata 35150020  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  35150019 actcacacttg 35150009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 11417027 - 11417128
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    ||||||||||  ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||      ||||||||||||||| |||||||||||    
T  11417027 cacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactc 11417126  T
Q  183 ac 184  Q
    ||    
T  11417127 ac 11417128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 26074830 - 26074950
Alignment:
Q  88 ccacactctt-atccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataac 180  Q
    |||||||||| | ||||||||||||| || | ||||||||||||||| |||||||    ||||||||||||      |||||||||||||||||||||||    
T  26074830 ccacactctttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataac 26074929  T
Q  181 tcacacttgtgcacaacaaca 201  Q
    |||||||||| ||||||||||    
T  26074930 tcacacttgtacacaacaaca 26074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 36568616 - 36568732
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttt-tatccgatgtgggacatataact 181  Q
    ||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| || ||||||||     ||||| |||||||||||||||||||||||    
T  36568616 ccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataact 36568715  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||  |||||||    
T  36568716 cacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 41340456 - 41340361
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggca 115  Q
    |||||||||||| |||||||  || ||||| ||||||| |||| |||| ||| || ||||||||||||||||||||||||||||||| |||||||||    
T  41340456 gttggggagtccggggagcctcgggagcggcaatgggc-aaacgtccaagaccataagagacttaaacaccacactcttatccaaaatcttaaggca 41340361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 624308 - 624198
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||| |||||  |||||||||||||| |||||||||| |  ||||||||||      |||||| | ||||||||||||||    
T  624308 acaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatata 624209  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  624208 actcacacttg 624198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 27502082 - 27502192
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||| ||| | |||| ||||||||| | ||||||||||||||||||||||| || |||| |||||      |||||||| ||||||||||||||    
T  27502082 acaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatata 27502181  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  27502182 actcacacttg 27502192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 34103732 - 34103625
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtg 118  Q
    |||||||||||| | |||||| || ||||| |||||| ||||| || ||| | || ||||| ||||||||||||||||||| ||||||||||||||| ||    
T  34103732 gttggggagtccggagagccccgggagcggcaatgggtcaaacgtctaggtccataagagatttaaacaccacactcttattcaaaaccttaaggcaatg 34103633  T
Q  119 ggtttatg 126  Q
     |||||||    
T  34103632 agtttatg 34103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 3295395 - 3295498
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||| || ||||||||||      ||||||||||||||| |||||| ||||    
T  3295395 cacactctta-ccaaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat-actc 3295492  T
Q  183 acactt 188  Q
    ||||||    
T  3295493 acactt 3295498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 1028566 - 1028682
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttt------tatccgatgtgggacatataact 181  Q
    ||||||||||| | ||||||||||||   | ||||||||||||||||||||||| |  |||||| |||||       |||||||||||||||||||||||    
T  1028566 ccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataact 1028665  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||| |||||||    
T  1028666 cacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 13042651 - 13042606
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  13042651 acaccacactcttatccaaaaccttaaggcaatgggtttatgggtc 13042606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 15370511 - 15370446
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac 153  Q
    |||||||||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||||||    
T  15370511 ccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaac 15370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 33747883 - 33747783
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||| |  | || |||||      |||||||||||||||||||||||    
T  33747883 acaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtgggacatata 33747784  T
Q  179 a 179  Q
    |    
T  33747783 a 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 36521946 - 36522061
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattaga-tgttcaacc------tttttatccgatgtgggacatataact 181  Q
    |||||||||| |||||||||||||||| | |||||||||||||||| | |||  ||| |||||||||      ||| |||| ||||||||||||||||||    
T  36521946 cacactcttacccaaaaccttaaggcaattggtttatgggtcctctcattta-aagagtgttcaacctcaacttttctatctgatgtgggacatataact 36522044  T
Q  182 cacacttgtgcacaaca 198  Q
    |||||||| ||||||||    
T  36522045 cacacttgcgcacaaca 36522061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 29549304 - 29549411
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    |||||||||||||||||||||||||| | || ||||||||||| ||||||||||  | |||||| |||      ||||||| ||| ||| ||||||||||    
T  29549304 ccacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataact 29549403  T
Q  182 cacacttg 189  Q
    ||||||||    
T  29549404 cacacttg 29549411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 36527145 - 36527249
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttttatccgatgtgggacatataactcacactt 188  Q
    ||||||||||||||||| ||||||||| || |||||||| |||||| |||||        || || ||| |||| |||||||||||||||||||||||||    
T  36527145 cacactcttatccaaaatcttaaggcaatgcgtttatggatcctctcacttacg------tccacttttctatctgatgtgggacatataactcacactt 36527238  T
Q  189 gtgcacaacaa 199  Q
    || ||||||||    
T  36527239 gtacacaacaa 36527249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 36522283 - 36522392
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac------ctttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||  | ||||||||| |||||||| |||||| | |||||||||       ||| ||||| ||||| ||||||||    
T  36522283 acaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttttctatccaatgtgagacatata 36522382  T
Q  179 actcacactt 188  Q
    ||||||||||    
T  36522383 actcacactt 36522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 13112649 - 13112604
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  13112649 acaccacactcttatccaaaaccttaagacaatgggtttatgggtc 13112604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 26590959 - 26591028
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||  ||||||||||||||| ||  ||||||| ||||||||||||| || ||||||||||||    
T  26590959 ccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaaccttt 26591028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 35914959 - 35914839
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataac 180  Q
    |||||| |||||||||| |  ||| |||| ||| |||| ||||| |||||||||| | |||||||||||||      |||||||||||| ||||||||||    
T  35914959 accacattcttatccaataatttagggcaatggatttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataac 35914860  T
Q  181 tcacacttgtgcacaacaaca 201  Q
    ||| |||| | ||||||||||    
T  35914859 tcatacttatacacaacaaca 35914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 38427655 - 38427553
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactc 182  Q
    ||||||||||  |||||||||||| || ||| || |||||||||| ||||||| ||||||||||||      ||| ||||| ||||||||||||||||||    
T  38427655 cacactcttacacaaaaccttaagacaatggattaatgggtcctc-tacttataagatgttcaacctttacttttctatccaatgtgggacatataactc 38427557  T
Q  183 acac 186  Q
    ||||    
T  38427556 acac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 13786051 - 13786166
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttttatccgatgtgggacat-ataactc 182  Q
    ||||||||||||||||| |||||| || | | |||| ||||| |||||||||| |  ||||||||     ||||||||||||||||  |||| || ||||    
T  13786051 cacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttataaagtgttcaaccatcactttttatccgatgtgaaacataattactc 13786150  T
Q  183 acacttgtgcacaaca 198  Q
    ||||||||||||||||    
T  13786151 acacttgtgcacaaca 13786166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 26074398 - 26074320
Alignment:
Q  117 tgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactcacacttg 189  Q
    ||||||||||||||||||||||||| || ||||||| |      ||| |||| ||||||||||||||||||||||||||    
T  26074398 tgggtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 39309719 - 39309677
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaaca 198  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  39309719 ttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 2411114 - 2411010
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctt------tttatccgatgtgggacatataactca 183  Q
    |||||||||  ||||||||||||||| |  |||||||||| ||||||||||  ||||||||||| ||      | ||||| |||| ||||||||||||||    
T  2411114 acactcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggacatataactca 2411015  T
Q  184 cactt 188  Q
    |||||    
T  2411014 cactt 2411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 5723914 - 5723947
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttg 189  Q
    ||||||||||||||||||||||||||||||||||    
T  5723914 ttttatccgatgtgggacatataactcacacttg 5723947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 35150782 - 35150737
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||    
T  35150782 ttttattcgatgtgggacatataactcacacttgcacacaacaaca 35150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 35151073 - 35151028
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||    
T  35151073 ttttattcgatgtgggacatataactcacacttgcacacaacaaca 35151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 13785730 - 13785764
Alignment:
Q  154 ctttttatccgatgtgggacatataactcacactt 188  Q
    ||||||||||||| |||||||||||||||||||||    
T  13785730 ctttttatccgatttgggacatataactcacactt 13785764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 32445997 - 32445943
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttactt 139  Q
    |||||||||| | | |||||||||||||||  |||||||||||||||||| ||||    
T  32445997 acaccacactttaacccaaaaccttaaggcgttgggtttatgggtcctctcactt 32445943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 300994 - 300949
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||| ||||||||||||||||| ||||||||| ||||| ||||    
T  300994 ttttatctgatgtgggacatataacccacacttgtacacaaaaaca 300949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 26900093 - 26900138
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||| |||||||||||||||||||| | |||| ||||||||||    
T  26900093 ttttatctgatgtgggacatataactcaaatttgtacacaacaaca 26900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 31509655 - 31509615
Alignment:
Q  159 tatccgatgtgggacatataactcacacttgtgcacaacaa 199  Q
    ||||||||||| |||||||||||||||||||  ||||||||    
T  31509655 tatccgatgtgagacatataactcacacttgcacacaacaa 31509615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 42524811 - 42524718
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac----ctttt-tatccgatgtgggacatataactcacacttgt 190  Q
    |||||||| || || ||| |||||| ||||||||| | || |||||||||||    ||||| ||||||||||| ||||||||| ||||||||||    
T  42524811 aaaaccttcagacaatggatttatgagtcctcttattcataagatgttcaactttacttttctatccgatgtgagacatataattcacacttgt 42524718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 17294689 - 17294569
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||      |||||||||||||||||||||||    
T  17294689 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatata 17294590  T
Q  179 actcacacttgtgcacaacaa 199  Q
    |||||||||||| ||||||||    
T  17294589 actcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 44290504 - 44290614
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||      |||||||||||||||||||||||    
T  44290504 acaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatata 44290603  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  44290604 actcacacttg 44290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 37556223 - 37556101
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc-------tttttatccgatgtgggacatat 177  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||| ||||||||||||       |||||||||||||||||||||||    
T  37556223 acaccacactcttacccaaaaccttaaggctatgggtttat-ggtcctcttacttataagatgttcaacctttactatttttatccgatgtgggacatat 37556125  T
Q  178 aactcacacttgtgcacaacaaca 201  Q
    ||||||||||||| ||||||||||    
T  37556124 aactcacacttgtacacaacaaca 37556101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 26661568 - 26661690
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||| |||||| || ||||||||||      ||||| |||||||||||||||||    
T  26661568 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatata 26661667  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  26661668 actcacacttgtacacaacaaca 26661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 34365037 - 34364915
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| || ||||||||||      |||||||||||||| ||||||||    
T  34365037 acaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatata 34364938  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  34364937 actcacacttgcacacaacaaca 34364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 44290870 - 44290981
Alignment:
Q  85 acaccacactctt-atccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatat 177  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      ||||||||||||||||||||||    
T  44290870 acaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 44290969  T
Q  178 aactcacacttg 189  Q
    ||||||||||||    
T  44290970 aactcacacttg 44290981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3550832 - 3550722
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||||||||| || ||||||||||      ||||||| |||||||||||||||    
T  3550832 acaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatata 3550733  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3550732 actcacacttg 3550722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 29798311 - 29798201
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||      |||||||| |||| |||||||||    
T  29798311 acaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatata 29798212  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  29798211 actcacacttg 29798201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 37850646 - 37850771
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||| |||||||||  || | ||||||||||| ||||||||||| || ||||||||||      |||||| ||||||||||||||||    
T  37850646 acaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatata 37850745  T
Q  179 actcacacttgtgcacaacaacagtt 204  Q
    |||||||||||  |||||||||||||    
T  37850746 actcacacttgcacacaacaacagtt 37850771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 50052069 - 50052178
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| |||||  | | ||||||||||||||||||||||| |||||||||||||      |||||||||||||||||||||||    
T  50052069 acaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatata 50052168  T
Q  179 actcacactt 188  Q
    ||||||||||    
T  50052169 actcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 41157487 - 41157367
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||  |||||||| |||||| ||||||||||||||||||||||||| || |||||||| |      ||||||| |||||||||||||||    
T  41157487 acaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatata 41157388  T
Q  179 actcacacttgtgcacaacaa 199  Q
    |||||||||||  ||||||||    
T  41157387 actcacacttgcacacaacaa 41157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 26661944 - 26662066
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| | |||||||||||| ||| |||||| || ||||||||||      ||||||| ||| ||||| |||||    
T  26661944 acaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgatatgggatatata 26662043  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  26662044 actcacacttgtacacaacaaca 26662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 31767211 - 31767329
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| | |||| |||||||||||||||||| || ||||||||||      ||||||||||||||| ||||||||| |    
T  31767211 cacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataaccc 31767310  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  31767311 acacttgcacacaacaaca 31767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 32594762 - 32594872
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || || |||||||||||||||||||||| || ||||||||||      ||||||| ||||| |||||||||    
T  32594762 acaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatata 32594861  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  32594862 actcacacttg 32594872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 34364615 - 34364497
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||  |||||||| || ||||||||||||| || ||||||||||      |||||||||||||| ||||||||||||    
T  34364615 cacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 34364516  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  34364515 acacttgcacacaacaaca 34364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 41157103 - 41156981
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||| ||| || |||||||||||||||||||||| || ||||||||||      ||||||||| | |||||||||||    
T  41157103 acaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggacatata 41157004  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    | |||||||||  ||||||||||    
T  41157003 attcacacttgcacacaacaaca 41156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 41142467 - 41142374
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||| |||||||||||||||| |||||||| || ||||||||||      ||||||||||||||||||||||||||||||||||    
T  41142467 aaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttg 41142374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 41184489 - 41184593
Alignment:
Q  103 aaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgcacaa 196  Q
    ||||||||||||| ||||||||||||||||||||||||| |  ||||||||||      |||||||||||||| |||||||||||||||||||  |||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T
Q  197 caaca 201  Q
    |||||    
T  41184589 caaca 41184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 40082516 - 40082398
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataac 180  Q
    |||||||||||| |||||||||||||||| ||  ||||||  ||||||||||||| || ||||||||||||      ||||||||||| |||||||||||    
T  40082516 accacactcttacccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataac 40082418  T
Q  181 tcacacttgtgcacaacaac 200  Q
    ||||||||| ||||||||||    
T  40082417 tcacacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 11977388 - 11977270
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| | |||||||| || ||||||||||| || |||||||| |      ||||| |||||||||||||||||||||    
T  11977388 cacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactc 11977289  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||| |||| |||||    
T  11977288 acacttgtacacagcaaca 11977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 41759595 - 41759485
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||| ||||||| || |||||||||| || |||||||| |      |||||||||||||| ||||||||    
T  41759595 acaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatata 41759496  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  41759495 actcacacttg 41759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 34649544 - 34649427
Alignment:
Q  91 cactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcac 184  Q
    |||||||| |||||||||||||||| | ||||||||||| ||   |||||| || ||||||||||||      |||||||||||||||||||||||||||    
T  34649544 cactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcac 34649445  T
Q  185 acttgtgcacaacaacag 202  Q
    ||||||  ||||||||||    
T  34649444 acttgtatacaacaacag 34649427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 3537648 - 3537752
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||||| || ||||||||| |||||||||||| || || ||||||||||      ||||||||||||||||||||||||||    
T  3537648 ccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtgggacatataact 3537747  T
Q  182 cacac 186  Q
     ||||    
T  3537748 aacac 3537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 22077544 - 22077660
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||   | |||||||||||||||||||||| || |||||||||      ||| ||||||||||| |||||||||||    
T  22077544 ccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataact 22077643  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||  |||||||    
T  22077644 cacacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 39066246 - 39066368
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||||||||||||||||| || ||  |||||||||| ||||| |||| || |||||||||      ||| |||||||||||| | |||||    
T  39066246 acaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaatatata 39066345  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  39066346 actcacacttgcacacaacaaca 39066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 3537226 - 3537303
Alignment:
Q  118 gggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||||||||||||| || ||||||||||||      ||||||||||||||||||||||||||||||||    
T  3537226 gggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 3537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 5320011 - 5320121
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttt-tatccgatgtgggacatata 178  Q
    |||| ||||||||| |||||||||||||||  || ||||||||||||||| |||||| || ||||||||     ||||| |||||||||||| |||||||    
T  5320011 acactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatata 5320110  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  5320111 actcacacttg 5320121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 14318979 - 14318875
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| | | |||||||||| |||||||||| || ||||||||||      |||||||||| |||| |||||||    
T  14318979 acaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatata 14318880  T
Q  179 actca 183  Q
    |||||    
T  14318879 actca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 38804401 - 38804521
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||| ||||||||| ||||||||||||||   ||||||||||| ||||||||||||| |  ||||||||||      |||||| ||||||||||| ||||    
T  38804401 acactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtgggacgtata 38804500  T
Q  179 actcacacttgtgcacaacaa 199  Q
    ||||||||||||  |||||||    
T  38804501 actcacacttgtaaacaacaa 38804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 9956017 - 9955911
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggttt-atgggtcctcttacttattagatgttcaacc-------tttttatccgatgtgggacatataac 180  Q
    |||||||||| |||||||||||||||| | ||||| |||||||||||||||||| |  |||||||||       |||||||| |||||||||||||||||    
T  9956017 cacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataac 9955918  T
Q  181 tcacact 187  Q
    |||||||    
T  9955917 tcacact 9955911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 22077160 - 22077228
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||||||||||| |||| || |||||||||||||||||||||| || | ||||||||||    
T  22077160 cacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaaccttt 22077228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 24600360 - 24600479
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    ||||||||||||||  |||||||||||| || || ||||||| || ||||||||||| | ||||||||||      ||| |||||||| |||||||||||    
T  24600360 acaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatata 24600459  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  24600460 actcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 48588534 - 48588644
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||| |||||||| |||||||||||||||| ||  |||| ||||| |||||||||| || ||||||||||      ||||||||||||| ||||||| |    
T  48588534 acaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcggacataga 48588633  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  48588634 actcacacttg 48588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 3875380 - 3875497
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||| ||||| | |||||||||||||| |||||||||| |||||||||||||| || ||| |||||      ||||||||||||||| |||||||||||    
T  3875380 ccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataact 3875479  T
Q  182 cacacttgtgcacaacaa 199  Q
     || ||||  ||||||||    
T  3875480 gactcttgcacacaacaa 3875497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 45494020 - 45494135
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat-ta---gatgttcaacct------ttttatccgatgtgggaca 174  Q
    |||||||||||||||||||||| |||||||| ||||||||||| || |||||||||| ||   | ||||||||||      |||||||||||||||||||    
T  45494020 acaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaacctttactattttatccgatgtgggaca 45494119  T
Q  175 tat-aactcacacttg 189  Q
    ||| ||||||||||||    
T  45494120 tataaactcacacttg 45494135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 5575213 - 5575144
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||||||||||||| ||  ||| ||||| ||||||||||||||| || ||||||||||||    
T  5575213 ccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaaccttt 5575144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 66136 - 66200
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaa 152  Q
    ||||||||||| |||||||||||||||  | ||||||||||||||||||||||| || |||||||    
T  66136 ccacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaa 66200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 25293565 - 25293657
Alignment:
Q  19 gttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaa 111  Q
    ||||||||||||  ||||||| |  ||||| |||||| ||||| | |||||| || |||||||| ||||||||||||||| ||||||||||||    
T  25293565 gttggggagtccgaggagccccgagagcggcaatgggtcaaacatacaggaccataagagacttgaacaccacactcttacccaaaaccttaa 25293657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 44043818 - 44043886
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac 153  Q
    |||||||||||||| |||||| |||||| || |||||||||||||| |||||||||| || ||||||||    
T  44043818 acaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaac 44043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 21378119 - 21378209
Alignment:
Q  117 tgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||||||||||||| |||| ||||||||      || |||||||| |||||||||||||| |||||||  ||||||||||    
T  21378119 tgggtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaaca 21378209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 66525 - 66638
Alignment:
Q  92 actcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactcaca 185  Q
    ||||||| |||||||||||||||  |  |||||||| ||||||||||||| || |||||||||      ||| |||||||| ||| ||||||||||||||    
T  66525 actcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcaca 66624  T
Q  186 cttgtgcacaacaa 199  Q
    ||||  ||||||||    
T  66625 cttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 37555841 - 37555721
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctt------tttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||   || |||| || ||||||||||||| |  | |||||||||      ||||||||||||||||| ||||    
T  37555841 acaccacactcttacccaaaaccttaaggctaaggatttaagg-tcctcttacttataatgtattcaaccttcactattttatccgatgtgggacttata 37555743  T
Q  179 actcacacttgtgcacaacaac 200  Q
    |||||||||| | |||||||||    
T  37555742 actcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 45084457 - 45084384
Alignment:
Q  122 ttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||||||||| || ||||||||||||      ||||||||||||||| ||||||||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttg 45084384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 45839743 - 45839617
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttc-----aaccttttt-----atccgatgtgggaca 174  Q
    |||||||| ||||| |||||||||||||||| |   |||||||||| |||||||||| || |||||     ||||||| |     |||||||||||||||    
T  45839743 acaccacaatcttacccaaaaccttaaggcattacatttatgggtcttcttacttataaggtgttcgattcaacctttattttctatccgatgtgggaca 45839644  T
Q  175 tataactcacacttgtgcacaacaaca 201  Q
    ||||||||| |||||| ||||||||||    
T  45839643 tataactcatacttgtacacaacaaca 45839617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 22077878 - 22077946
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||||| || |||||||| |||  || |||||||||||||||||||||| |||||||||||||||    
T  22077878 ccacactcttaccccaaacctta-ggctatgagtttatgggtcctcttacttataagatgttcaaccttt 22077946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 32168747 - 32168795
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctctta 136  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  32168747 ccacactcttacccaaaacctcaaggcaatgggtttatgggtcctctta 32168795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 19283504 - 19283620
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    |||||||||||||||||||||||||||  || ||||||| ||||||| | |||  |  || ||||||      ||| |||||| ||||||||||||||||    
T  19283504 ccacactcttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataact 19283603  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||  |||||||    
T  19283604 cacacttgcacacaaca 19283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 30630690 - 30630794
Alignment:
Q  91 cactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactcac 184  Q
    |||||||| ||||||| |||||||| || |||||||||| ||||||||||| |  |||  ||||      ||||||||||||||| ||||||||| ||||    
T  30630690 cactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcac 30630789  T
Q  185 acttg 189  Q
    |||||    
T  30630790 acttg 30630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 35154162 - 35154207
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  35154162 ttttatctgatgtgggacatataactcacacttgcacacaacaaca 35154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 5528815 - 5528902
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    |||||||||||||  | || ||||||| ||||||||| |||| |||||||||||||      |||||||||||||| |||||||||||    
T  5528815 ccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 22077248 - 22077287
Alignment:
Q  159 tatccgatgtgggacatataactcacacttgtgcacaaca 198  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  22077248 tatccgatgtgggacatataactcacacttgcacacaaca 22077287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 22793387 - 22793270
Alignment:
Q  89 cacactcttatccaaaaccttaaggcag-tgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||  ||||||| |||||||  ||||||||||| |||||| |||||| |  | ||||||||      || ||| |||||||||||||||||||    
T  22793387 cacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctctacttttctatacgatgtgggacatataact 22793288  T
Q  182 cacacttgtgcacaacaa 199  Q
    ||||||||  ||||||||    
T  22793287 cacacttgctcacaacaa 22793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 41184152 - 41184190
Alignment:
Q  103 aaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  41184152 aaaccttaaggcaatgggtttatggatcctcttacttat 41184190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Original strand, 50051777 - 50051807
Alignment:
Q  159 tatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||||||||||||||||||||    
T  50051777 tatccgatgtgggacatataactcacacttg 50051807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 4956268 - 4956231
Alignment:
Q  120 gtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  4956268 gtttatggatcctcttacttataagatgttcaaccttt 4956231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 11977056 - 11977015
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatg 126  Q
    |||||||||||||| |||||||||||||||| | ||||||||    
T  11977056 acaccacactcttacccaaaaccttaaggcattaggtttatg 11977015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 15880372 - 15880253
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      ||||||||||||||| ||||||||||    
T  15880372 ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataact 15880273  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||| ||||||||||    
T  15880272 cacacttgtacacaacaaca 15880253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 6421497 - 6421375
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||| |||||| || ||||||| |||||||||||||| || ||||||||||||      |||||||||||||||||||||    
T  6421497 acaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatata 6421398  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||    
T  6421397 actcacacttgtgcacaacaaca 6421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 36178651 - 36178761
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  36178651 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatata 36178750  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  36178751 actcacacttg 36178761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 37106302 - 37106190
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||    
T  37106302 aaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacata 37106203  T
Q  177 taactcacacttg 189  Q
    |||||||||||||    
T  37106202 taactcacacttg 37106190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 14745716 - 14745823
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||| |||||||||||||||||    
T  14745716 ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataact 14745815  T
Q  182 cacacttg 189  Q
    ||||||||    
T  14745816 cacacttg 14745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 28254283 - 28254405
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||||      ||| ||||||||||||||||||||    
T  28254283 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatata 28254382  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    | ||||||| |  ||||||||||    
T  28254383 agtcacactggcacacaacaaca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 36005929 - 36006047
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttttatccgatgtgggacatataactc 182  Q
    ||||||| ||| |||||||||||||||| || |||||||||||||||||||||| || ||||||||     |||| ||| ||||||||||||||||||||    
T  36005929 ccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttactttctattcgatgtgggacatataactc 36006028  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||| ||||||||||    
T  36006029 acacttgtacacaacaaca 36006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 38796673 - 38796788
Alignment:
Q  92 actcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcaca 185  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||||| || ||||||||||      ||||||| ||||||||||||||||||||||    
T  38796673 actcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcaca 38796772  T
Q  186 cttgtgcacaacaaca 201  Q
    ||||  ||||||||||    
T  38796773 cttgcacacaacaaca 38796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 41283524 - 41283631
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| | |||||||||||||| || |||||||||||||||||||||| || ||||||||||      ||||||||||| ||||||||||||||    
T  41283524 ccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataact 41283623  T
Q  182 cacacttg 189  Q
    ||||||||    
T  41283624 cacacttg 41283631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 962706 - 962600
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||||||| || |||||||||||||||||| |||||| || |||||||||      ||| ||||||||||||||||||||||||    
T  962706 cacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactc 962607  T
Q  183 acacttg 189  Q
    |||||||    
T  962606 acacttg 962600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 5542671 - 5542781
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| | |||||||||||||| | ||||||||||||||||||||||| || ||||||||||      |||||| |||| |||||||||||    
T  5542671 acaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatata 5542770  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  5542771 actcacacttg 5542781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 5543044 - 5543154
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| ||||||||| | ||||||||| ||||||||||||| || ||||||||||      ||||||| |||||||||||||||    
T  5543044 acaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatata 5543143  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  5543144 actcacacttg 5543154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 28531361 - 28531479
Alignment:
Q  86 caccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataa 179  Q
    ||||||||||||| |||||| ||||||||| || ||||||||| |||||||||||| || |||||||||      ||| |||||||||||||||||||||    
T  28531361 caccacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataa 28531460  T
Q  180 ctcacacttgtgcacaaca 198  Q
    ||||||||||  |||||||    
T  28531461 ctcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 37106036 - 37105926
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| ||||||||| || |||||||||||| ||||||||| || ||||||||||      |||||| ||||||||||||||||    
T  37106036 acaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatata 37105937  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  37105936 actcacacttg 37105926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 40733629 - 40733507
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttca------acctttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| ||||||  || ||||||||||||||||||||||| || ||||||      || |||||||| |||||||||||||||    
T  40733629 acaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatata 40733530  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||| ||||    
T  40733529 actcacacttgtacacaataaca 40733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 14745343 - 14745446
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||       |||||| |||||||||||||||||||    
T  14745343 ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataact 14745442  T
Q  182 caca 185  Q
    ||||    
T  14745443 caca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 31468800 - 31468914
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||    | |||| ||||||||||      |||||||||||||||||||||||||    
T  31468800 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataactc 31468895  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  31468896 acacttgcacacaacaaca 31468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 35580776 - 35580879
Alignment:
Q  91 cactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcac 184  Q
    |||||||| |||||||||||||||| ||||||||| |||||||| |||||| || |||||||| |      |||||||||||||||||||||||||||||    
T  35580776 cactcttacccaaaaccttaaggcaatgggtttat-ggtcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcac 35580874  T
Q  185 acttg 189  Q
    |||||    
T  35580875 acttg 35580879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 6713085 - 6712966
Alignment:
Q  89 cacactcttatccaaaa-ccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataact 181  Q
    |||||||||| |||||| |||||| ||| | ||||||||||||||||||||||| || |||||||| |||      |||||||||||| |||||||||||    
T  6713085 cacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataact 6712986  T
Q  182 cacacttgtgcacaacaaca 201  Q
    |||||||||  |||||||||    
T  6712985 cacacttgtatacaacaaca 6712966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 37632643 - 37632762
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||| |   ||||||||||||||||||||||||| | ||||  |||||      ||||||||||||| |||||||||    
T  37632643 acaccacactcttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatata 37632742  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  37632743 actcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 42514758 - 42514651
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||||||||||||| || |||||||||      ||| |||| ||||| ||||||||||||    
T  42514758 ccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataact 42514659  T
Q  182 cacacttg 189  Q
    ||||||||    
T  42514658 cacacttg 42514651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 15511541 - 15511664
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| |||||| || ||||||||||||||||||||||||| |  ||||||||||      ||||||||| |||| ||||||||    
T  15511541 acaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatata 15511640  T
Q  179 actcacacttgtgcacaacaacagtt 204  Q
    |||  ||||||  |||||||||||||    
T  15511641 act--cacttgcacacaacaacagtt 15511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 29874072 - 29874185
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  | |||| |  |||||||||      ||| |||| |||||||||||||||||     
T  29874072 ccacactcttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttctatctgatgtgggacatataaca 29874171  T
Q  182 cacacttgtgcaca 195  Q
    ||||||||| ||||    
T  29874172 cacacttgtacaca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 36178320 - 36178425
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactca 183  Q
    ||||||||| ||||||||||||| || |||||||||| |||| ||||||||| || ||||| ||||      |||||||||| |||||||||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactca 36178419  T
Q  184 cacttg 189  Q
    ||||||    
T  36178420 cacttg 36178425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 40679678 - 40679794
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||| || |||||||||      ||| |||||||| ||||||||||||||    
T  40679678 ccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataact 40679777  T
Q  182 cacacttgtgcacaaca 198  Q
    |||| |||  |||||||    
T  40679778 cacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 33731760 - 33731653
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||| ||||||| |||||||||||||||| | ||||||||| ||||||||||||| || || |||||||      |||||||||||||| || |||||    
T  33731760 acaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatata 33731661  T
Q  179 actcacac 186  Q
    ||||||||    
T  33731660 actcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 36178218 - 36178289
Alignment:
Q  86 caccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||| | ||||||||| || ||||||||||||    
T  36178218 caccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaaccttt 36178289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 16542556 - 16542439
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactca 183  Q
    |||||||||  ||||| ||||||||| || ||||||  ||||||||| |||| || ||||||||||||      |||||||||||||||| |||||||||    
T  16542556 acactcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactca 16542457  T
Q  184 cacttgtgcacaacaaca 201  Q
    ||||||  ||||||||||    
T  16542456 cacttgcacacaacaaca 16542439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 38796298 - 38796386
Alignment:
Q  119 ggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||| ||||||||||||||| || |||||||| |||      ||||||||||||||||||||||||||||||||  ||||||||||    
T  38796298 ggtttataggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaaca 38796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 6422222 - 6422150
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| | |||||||||||||  |||||||||||||||||||| |||| |  ||||||||||||    
T  6422222 acaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaaccttt 6422150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 31899496 - 31899594
Alignment:
Q  109 taaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||| || |||||||||||||||||||||| || |||||||| |||      ||||||||||||| |||||||||||||||||   ||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 37895105 - 37895211
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac------ctttttatccgatgtgggacata 176  Q
    |||||||||||||||| |||||||||||||||| |||||||||| || || |||||| | || | ||||||       ||| ||||||||||||||||||    
T  37895105 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacata 37895204  T
Q  177 taactca 183  Q
    |||||||    
T  37895205 taactca 37895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 40733994 - 40733873
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| | |||||||||||| || |||| || ||||      |||| ||||||||||||||||    
T  40733994 acaccacactcttacccaaaactttaaggctgtaggtt-atgagccctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatata 40733896  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||| ||||    
T  40733895 actcacacttgtacacaataaca 40733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 6421843 - 6421793
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctctt 135  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  6421843 acaccacactcttacccaaaaccttaaggcaataggtttatgggtcctctt 6421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 7598684 - 7598611
Alignment:
Q  122 ttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||||||||| || ||||||||||||      ||||| ||||||||||||||||||||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttg 7598611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 5367564 - 5367448
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||||||   || ||| |||| || |||||||||| || ||||||||||      ||||||||||| |||||||||||  |    
T  5367564 ccacactcttacccaaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatat 5367465  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||| |||||||    
T  5367464 cacacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 6421339 - 6421294
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  6421339 ttttatccgatgtgggacatataacttacacttgtacacaacaaca 6421294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 36785686 - 36785731
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||    
T  36785686 ttttatccgatgtgggacatataactcacacttgcacacaacaaca 36785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 33561501 - 33561616
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||||||| || || ||||||||||||||| |||||| |  |||| ||||      ||| |||| ||||||| |||||||||||    
T  33561501 cacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactc 33561600  T
Q  183 acacttgtgcacaaca 198  Q
    |||||||  |||||||    
T  33561601 acacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 1770004 - 1769894
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    ||||||||||||||| |||| | | || ||  || ||||||| |||||||||||||| || |||||||| |||      |||||||||||| ||||||||    
T  1770004 acaccacactcttattcaaagcttcaaagctatgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatata 1769905  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  1769904 actcacacttg 1769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 9231356 - 9231289
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||| ||||||| ||||||| ||||||| |||| |||||||| |||| | |||||||||||||    
T  9231356 acactcttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaaccttt 9231289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 30313286 - 30313170
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||| ||||||||| || |||| |||||||||| |||||| || |||||||||      ||| ||||||||||| ||||||||||     
T  30313286 ccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataag-tgttcaacctccacttttctatccgatgtgagacatataaca 30313188  T
Q  182 cacacttgtgcacaacaa 199  Q
    ||| ||||  ||||||||    
T  30313187 cacgcttgcacacaacaa 30313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 30323573 - 30323456
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| || |||||| |||||||| |||| | |  |||||||||      ||| |||| ||| |||||||||||||     
T  30323573 ccacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggacatataaca 30323474  T
Q  182 cacacttgtgcacaacaa 199  Q
    ||||||||  ||||||||    
T  30323473 cacacttgcacacaacaa 30323456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 31259664 - 31259734
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||| ||||||||||||||   | |||||||||||| |||||||||| || |||| |||||||    
T  31259664 accacactcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaaccttt 31259734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 3673120 - 3673075
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||    
T  3673120 ttttatccaatgtgggacatataactcacacttgcacacaacaaca 3673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 29676938 - 29676893
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||    
T  29676938 ttttatccgatgtgggacatataactcacacctgcacacaacaaca 29676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 7598340 - 7598268
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||| | ||||| |||||||||||||||  || ||||||||||||||||| |||| || |||| |||||||    
T  7598340 acaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaaccttt 7598268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 36784306 - 36784362
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||| ||||| ||||||||||||||||| ||  ||||||||||||| ||||||||||    
T  36784306 acacaacacttttatccaaaaccttaagacaaagggtttatgggtcatcttacttat 36784362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 31385834 - 31385779
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    |||||||||||||||| |||||||||||||||| | |||||| || || |||||||    
T  31385834 ccaaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacct 31385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 180
Target Start/End: Original strand, 40163418 - 40163520
Alignment:
Q  85 acaccacactcttatccaaaaccttaagg-cagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatat 177  Q
    |||||||||| ||| |||||||||||| | || | |||| ||||||| |||||||||| || |||||||||      ||| |||||||||||||||||||    
T  40163418 acaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatat 40163517  T
Q  178 aac 180  Q
    |||    
T  40163518 aac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 6421738 - 6421688
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctctt 135  Q
    |||||||||||||| |||||||||| || || | |||||||||||||||||    
T  6421738 acaccacactcttacccaaaacctttagtcaataggtttatgggtcctctt 6421688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 16590978 - 16590881
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc-------tttttatccgatgtgggacatataactcacacttgtgcac 194  Q
    |||||||||||||| || ||||||||||||||||||||      |||||||||       |||||||  ||||||||||||||||||||||||||  |||    
T  16590978 aaaaccttaaggcaatgtgtttatgggtcctcttactt------tgttcaacctttactttttttatttgatgtgggacatataactcacacttgcacac 16590885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 29873587 - 29873653
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    ||||||||||  ||||||||||||||| || ||||||| ||||||  |||||| | |||||||||||    
T  29873587 cacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacct 29873653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 3672754 - 3672709
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||| ||||||||||||||||||||| |||||  ||||||||||    
T  3672754 ttttattcgatgtgggacatataactcatacttgcacacaacaaca 3672709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 33954377 - 33954426
Alignment:
Q  149 tcaacctttttatccgatgtgggacatataactcacacttgtgcacaaca 198  Q
    ||||| ||| |||| ||||||||||||||||||||||||||  |||||||    
T  33954377 tcaacttttctatctgatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 3672813 - 3672773
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttat 125  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  3672813 acaccacactcttacccaaaatcttaaggcaatgggtttat 3672773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 3673176 - 3673124
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||| |||||| ||||| ||| || |||||||| |||||||||||||    
T  3673176 cacactcttagccaaaatcttaaagcaatgagtttatggatcctcttacttat 3673124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 23346344 - 23346277
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||| | |||||||||||||  |||||||||||| ||||||| |||| || |||| |||||||    
T  23346344 cacactcttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaaccttt 23346277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 35580494 - 35580534
Alignment:
Q  93 ctcttatccaaaaccttaaggcagtgggtttatgggtcctc 133  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  35580494 ctcttacccaaaaccttaaggcaatgagtttatgggtcctc 35580534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 25483448 - 25483326
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||      |||||||||||||| ||||||||    
T  25483448 acaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatata 25483349  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  25483348 actcacacttgcacacaacaaca 25483326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 1731689 - 1731813
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||||| |||||||||||||||| | |||||||||||||||||| |||| |||||||||||||      ||||||| |||||||||||||    
T  1731689 aaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacata 1731788  T
Q  177 taactcacacttgtgcacaacaaca 201  Q
    ||||||||| |||  ||||||||||    
T  1731789 taactcacatttgcacacaacaaca 1731813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 34646693 - 34646815
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||||| ||||||||| |||| || |||||||| |||      |||||||||||||||||||||    
T  34646693 acaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatata 34646792  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  34646793 actcacacttgtacacaacaaca 34646815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 49880272 - 49880162
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||      |||||| | ||||||||||||||    
T  49880272 acaccacgctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatata 49880173  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  49880172 actcacacttg 49880162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 4955364 - 4955483
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||||||| || ||||||||||      ||||||||||| || |||||||||||    
T  4955364 ccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataact 4955463  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||  ||||||||||    
T  4955464 cacacttgcacacaacaaca 4955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 22183311 - 22183430
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||| |  |||||||| |      ||||||||||||||||| ||||||||    
T  22183311 ccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataact 22183410  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||  ||||||||||    
T  22183411 cacacttgcacacaacaaca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 52884984 - 52884877
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgca 193  Q
    |||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||      ||||||||||||||||||||||||||||||||||  ||    
T  52884984 ccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaca 52884885  T
Q  194 caacaaca 201  Q
    ||||||||    
T  52884884 caacaaca 52884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3340919 - 3340809
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || || |||||||      ||| ||| |||| ||||||||||    
T  3340919 acaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatata 3340820  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3340819 actcacacttg 3340809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 10246031 - 10245910
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||| || ||||||||||      |||||||||||||||| ||||||    
T  10246031 acaccacactcttacccaaaaccttaaggctttgggtttat-ggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatata 10245933  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  10245932 actcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 22028005 - 22028127
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||| ||||| |||||||||||||||| |  |||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  22028005 acaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatata 22028104  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    | |||||||||  ||||||||||    
T  22028105 agtcacacttgcacacaacaaca 22028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 36629349 - 36629230
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttt-tatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || |||| |||     ||||| ||||||||||||||||||||    
T  36629349 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatata 36629250  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  36629249 actcacacttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 50630799 - 50630909
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||      ||||||||||||| |||||||||    
T  50630799 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatata 50630898  T
Q  179 actcacacttg 189  Q
    |||||| ||||    
T  50630899 actcacgcttg 50630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 54017643 - 54017749
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||      ||||||| || ||||||||||||||||    
T  54017643 cacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactc 54017742  T
Q  183 acacttg 189  Q
    |||||||    
T  54017743 acacttg 54017749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 55933168 - 55933278
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| || |||||||||       ||||||||||||| |||||||||    
T  55933168 acaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatata 55933267  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  55933268 actcacacttg 55933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 49303018 - 49302907
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttac--ttattagatgttcaacc------tttttatccgatgtgggacata 176  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||      |||||||  |||||||||||||    
T  49303018 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacata 49302919  T
Q  177 taactcacactt 188  Q
    ||||||||||||    
T  49302918 taactcacactt 49302907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 36608705 - 36608828
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || ||| ||||||| ||||||||||||| || |||||||| |      ||||||||||||| |||||||||    
T  36608705 acaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatata 36608804  T
Q  179 actcacacttgtgcacaacaacag 202  Q
    |||||||||||  |||||||||||    
T  36608805 actcacacttgcacacaacaacag 36608828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 36572131 - 36572009
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||| ||||| | |||||||||||||||| ||| |||||||||| |||||||||| || |||||||| |||      |||| ||||||||||||||||    
T  36572131 acaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatata 36572032  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  36572031 actcacacttgtacacaacaaca 36572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 39404510 - 39404388
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||| ||||  |||||||||||||||  | ||||||||||||||||||||||| || ||||| ||||||      ||||| |||||||||||||||    
T  39404510 acaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatata 39404411  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  39404410 actcacacttgtacacaacaaca 39404388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 54936308 - 54936190
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  || ||||||||||      ||||||| ||||||||    |||    
T  54936308 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtggg----ata 54936213  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  54936212 actcacacttgtacacaacaaca 54936190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 41707509 - 41707628
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || || |||||||||| || ||||||||  | ||||||||||||      |||||||||||||||||||||    
T  41707509 acaccacactctta-ccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatata 41707607  T
Q  179 actcacacttgtgcacaacaa 199  Q
    |||||||||||| ||||||||    
T  41707608 actcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 52884808 - 52884688
Alignment:
Q  85 acaccacactcttatcc-aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatat 177  Q
    |||||||||||||| || |||||||||||||| ||||||||| | || |||||||||| || ||||||||||      ||||||||||||||||||||||    
T  52884808 acaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 52884709  T
Q  178 aactcacacttgtgcacaaca 198  Q
    ||||||||||||  |||||||    
T  52884708 aactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 39792904 - 39793023
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaac-----ctttt-tatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||| || ||||||| ||||| || ||||||||     ||||| |||| |||||||||||||||    
T  39792904 acaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatata 39793003  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||| |||||||    
T  39793004 actcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 41370469 - 41370359
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||||| || | |||||| |      ||||||||||| |||||||||||    
T  41370469 acactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatata 41370370  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  41370369 actcacacttg 41370359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 50002538 - 50002428
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||  |  ||||||||||      |||||||||||||| ||||||||    
T  50002538 acaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatata 50002439  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  50002438 actcacacttg 50002428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 50459833 - 50459711
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||| |||||| | |||||||||||  | |||||||||| |||||||||||||| |||||||||||||      ||||| ||||||||| |||||||    
T  50459833 acaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatata 50459734  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||| ||||| ||||||    
T  50459733 actcacacttatgcactacaaca 50459711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 20825950 - 20825829
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||||| |||||||||||||||    ||||||||||| |||||| |||| || ||||||||||      ||||||||||||||| |||||    
T  20825950 aaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacata 20825851  T
Q  177 taactcacacttgtgcacaaca 198  Q
    ||||||||| |||| |||||||    
T  20825850 taactcacatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 54109024 - 54108928
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||    
T  54109024 acaccacactcttacccaaaac-ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 2740809 - 2740693
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    |||||||||||   |||||||||||||  ||||||||| ||||||||||||||| || ||||||||||      || |||||||||||||||||||||||    
T  2740809 ccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataact 2740710  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||  |||||||    
T  2740709 cacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 2741180 - 2741073
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| |||  |||||||||||||||||||| || | ||||||||      || |||| ||||||||||||||||||    
T  2741180 ccacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataact 2741081  T
Q  182 cacacttg 189  Q
    ||||||||    
T  2741080 cacacttg 2741073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 3244499 - 3244614
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactc 182  Q
    |||| ||||| ||||||| ||||| || || |||||||||||||||||||||| ||||||||||||      ||| ||||||||||| ||||||||||||    
T  3244499 cacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactc 3244598  T
Q  183 acacttgtgcacaaca 198  Q
    |||||||  |||||||    
T  3244599 acacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 44620467 - 44620362
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||  |||||| |||| || ||||||||||      ||||||||||||||| |||||    
T  44620467 aaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacata 44620368  T
Q  177 taactc 182  Q
    ||||||    
T  44620367 taactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 45496917 - 45496820
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacata 176  Q
    |||||||||||||| ||||||||||||| || || |||||| ||||||||||||||| || ||||||||||      |||||||||||||||||||||    
T  45496917 acaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 1868208 - 1868119
Alignment:
Q  40 tggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||| |||||||||||| |||||||  || |||||||||| ||  ||||||||| ||||||| |||||||| |||||||||||||    
T  1868208 tggaagcggcaatgggccaaacgtccaggatcataagagacttaatcataacactcttacccaaaactttaaggcaatgggtttatgggt 1868119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 34004633 - 34004737
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt-----ttatccgatgtgggacatataactca 183  Q
    |||||||||||| |||||||||||| | || |||||||||||||||||||||| || ||||||||||||     |||||  ||||| |||||||||||||    
T  34004633 cacactcttatcgaaaaccttaaggaa-tgagtttatgggtcctcttacttataagttgttcaacctttagtttttatcatatgtgtgacatataactca 34004731  T
Q  184 cacttg 189  Q
    ||||||    
T  34004732 cacttg 34004737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 44620769 - 44620662
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataac 180  Q
    |||||||||||| ||||||||||||||   ||| ||||||||||||||||||||| |  ||||||||||      ||| |||||||||||||||||||||    
T  44620769 accacactcttacccaaaaccttaaggttatgg-tttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataac 44620671  T
Q  181 tcacacttg 189  Q
    |||||||||    
T  44620670 tcacacttg 44620662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 18932793 - 18932865
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||| |||| || | ||||||||||    
T  18932793 acaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaaccttt 18932865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 22028413 - 22028537
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc--------tttttatccgatgtgggacata 176  Q
    |||||||||||||| ||||||| ||||| || || ||||||||||||||||||| || || |||||||||        |||||||||||||| |||||||    
T  22028413 acaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacata 22028512  T
Q  177 taactcacacttgtgcacaacaaca 201  Q
    ||| | |||||||  ||||||||||    
T  22028513 taagtaacacttgcacacaacaaca 22028537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 54741227 - 54741341
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactca 183  Q
    ||||||||||||||||||||||| || |  || ||||||||||||||||||| || |||||||||      ||| ||||||||||| ||||||||| |||    
T  54741227 acactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattca 54741326  T
Q  184 cacttgtgcacaaca 198  Q
    ||||||  |||||||    
T  54741327 cacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 44621116 - 44621042
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||||| ||||||||||||| || || ||||||| | |||||||||||| || ||||||||||||    
T  44621116 aaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaaccttt 44621042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 31691261 - 31691208
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  31691261 ccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttat 31691208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 49076510 - 49076614
Alignment:
Q  103 aaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgcacaa 196  Q
    |||| ||||| || ||||||||| ||||||||||||||| || ||||||||||      ||||||||||| ||| ||||||||||||||||||  |||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaa 49076609  T
Q  197 caaca 201  Q
    |||||    
T  49076610 caaca 49076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 16888864 - 16888970
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttt------tatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||| |||| || || |||||| ||| ||||||||||| || | ||||||||||       ||||||||||||||||||||||||    
T  16888864 cacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactc 16888963  T
Q  183 acacttg 189  Q
    |||||||    
T  16888964 acacttg 16888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 16889580 - 16889690
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||| ||||||| ||||||| |||||||||| ||||||||  ||||||||||||| || | |||||||      ||| |||||||| || ||||||||    
T  16889580 acaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatata 16889679  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  16889680 actcacacttg 16889690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 39404127 - 39404013
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||| ||  || ||||||| |||||||||||||| |  ||||||||||      |||||| | |||| ||||||||||||    
T  39404127 ccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataact 39404028  T
Q  182 cacacttgtgcacaa 196  Q
    ||||||||| |||||    
T  39404027 cacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 43174616 - 43174496
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt-------ttatccgatgtgggacatataac 180  Q
    ||||||||||| |||| || ||||||   | |||||||| |||||||||||||| || ||||||||||||       ||||| |||||| | ||||||||    
T  43174616 ccacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataac 43174517  T
Q  181 tcacacttgtgcacaacaaca 201  Q
    |||||||||| ||||||||||    
T  43174516 tcacacttgtacacaacaaca 43174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 54017750 - 54017870
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtggg--acatataac 180  Q
    |||||||||| | ||||||||||| || ||||  ||||||||||||||||||| || ||||||||||      ||||||||||||||||  | |||||||    
T  54017750 cacactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatatataac 54017849  T
Q  181 tcacacttgtgcacaacaaca 201  Q
    ||||| |||  ||||||||||    
T  54017850 tcacatttgcacacaacaaca 54017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 54108649 - 54108576
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtg-ggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| |||||||||||||||| ||   |||||||||||| |||||||| || ||||||||||||    
T  54108649 acaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaaccttt 54108576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 3271895 - 3271843
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||| |||||||||||||||| | ||||||||||| |||||||||||    
T  3271895 cacactcttacccaaaaccttaaggcaataggtttatgggttctcttacttat 3271843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 6975503 - 6975606
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||| ||||||  | ||| |||||| |||||||||||||| |||| ||||||||      ||||||| |||||| |||||||||||    
T  6975503 ccacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataact 6975602  T
Q  182 caca 185  Q
    ||||    
T  6975603 caca 6975606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 23817725 - 23817781
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||||||| |||||||||||||||| || |||||||  |||||||||||||    
T  23817725 acaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttat 23817781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 32941171 - 32941239
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||| |||||||||||||||| || ||||||| | ||||||| |||| || ||||||||||||    
T  32941171 cacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaaccttt 32941239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 3341236 - 3341118
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||| |||||  || ||   |||||||||||||||||||| |  |||| |||||||      |||||| ||||||||||||||||||    
T  3341236 cacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactc 3341137  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  3341136 acacttgcacacaacaaca 3341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 4390149 - 4390267
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||| ||| || | | | || ||||||||||||| || ||||||||||      ||||||| ||||||||| || ||||||    
T  4390149 cacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactc 4390248  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  4390249 acacttgcacacaacaaca 4390267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 10396526 - 10396483
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  10396526 accacactcttatccaaaaccctaaggcaatgggtttatgggtc 10396483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 20826325 - 20826223
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    |||||||||| | ||||  |||||||  ||||||||||||| ||||||||||| |  |||||||| |||      |||||||||||||||||||||||||    
T  20826325 cacactcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactc 20826226  T
Q  183 aca 185  Q
    |||    
T  20826225 aca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 10246436 - 10246387
Alignment:
Q  108 ttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||  |||||||||||||||||| |||||| |||||||||||||||    
T  10246436 ttaaggctatgggtttatgggtcctctaacttataagatgttcaaccttt 10246387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 11197338 - 11197293
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  11197338 acaccacactcttacccaaaaccctaaggcaatgggtttatgggtc 11197293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 19504740 - 19504695
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||    
T  19504740 ttttatccgatatgggacatataactcatacttgtacacaacaaca 19504695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 45489452 - 45489497
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||    
T  45489452 ttttatccgatgtgagacatataattcacacttgtacacaacaaca 45489497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 43827551 - 43827496
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||||||||||||| |||||||||| ||  |||||||||||||||| ||||    
T  43827551 acaccacactcttatccaaa-ccttaaggcaatgaatttatgggtcctcttatttat 43827496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 49076875 - 49076946
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||| | ||||||||||||||   ||||||||||||| ||||||| ||| || ||||||||||||    
T  49076875 acaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttac-tataaggtgttcaaccttt 49076946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 3700400 - 3700357
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaa 199  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||    
T  3700400 ttttatccgatgtaggacatataactcacacttgcacacaacaa 3700357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 11706641 - 11706687
Alignment:
Q  155 tttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||| ||||||| ||||  ||||||||||    
T  11706641 tttttatccgatgtgggacatacaactcacccttgcacacaacaaca 11706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 18879914 - 18879852
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttca 151  Q
    |||||||||| |||||||||||||| | | ||||||| |||| |||||||||| || ||||||    
T  18879914 cacactcttacccaaaaccttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 23556914 - 23556980
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    |||||||||||||||||| |||||||| ||  ||||||| | |||||| |||| | |||||||||||    
T  23556914 cacactcttatccaaaactttaaggcaatgattttatggattctcttatttataaaatgttcaacct 23556980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 44620980 - 44620934
Alignment:
Q  156 ttttatccgatgt-gggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  44620980 ttttatccgatgttgggacatctaactcacacttgtccacaacaaca 44620934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 922530 - 922485
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||||||||| || |||| || ||||||||||||||    
T  922530 acaccacactcttatccaaacccctaagacaatgggtttatgggtc 922485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 29802637 - 29802604
Alignment:
Q  101 caaaaccttaaggcagtgggtttatgggtcctct 134  Q
    ||||||||||||||| ||||||||||||||||||    
T  29802637 caaaaccttaaggcattgggtttatgggtcctct 29802604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 44620331 - 44620286
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||| ||||||||||||||||||| | |||| ||||||||||    
T  44620331 ttttatcccatgtgggacatataactcatatttgtacacaacaaca 44620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 45484816 - 45484775
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||||||||| ||||||||||||| |||| ||||||    
T  45484816 ccaaaaccttaaggcattgggtttatgggttctctcacttat 45484775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 50788104 - 50788137
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||||||||||||||| |||||||    
T  50788104 ttttatccgatgtgggacatataacttacacttg 50788137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 51681653 - 51681604
Alignment:
Q  82 taaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcc 131  Q
    ||||||||||||||||| |||||| ||||||||| ||||| |||| ||||    
T  51681653 taaacaccacactcttacccaaaatcttaaggcaatgggtatatgagtcc 51681604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 760300 - 760245
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||| ||| |||||| ||||||||| || ||||||||||||||| ||||||    
T  760300 acaccacactttta-ccaaaatcttaaggcaatgagtttatgggtcctctcacttat 760245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 34544217 - 34544169
Alignment:
Q  87 accacactcttatccaaaa-ccttaaggcagtgggtttatgggtcctct 134  Q
    |||||||||||| |||||| |||||||||| || |||||||||||||||    
T  34544217 accacactcttacccaaaaaccttaaggcaatgagtttatgggtcctct 34544169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 3038339 - 3038458
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |  ||||||||||      ||||||||||||||||||||||||||    
T  3038339 ccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataact 3038438  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||| ||||||||||    
T  3038439 cacacttgtacacaacaaca 3038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 20870619 - 20870691
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20870619 acaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaaccttt 20870691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 70324 - 70441
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||| |      |||||||||||||||||||||||||||    
T  70324 cacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactc 70423  T
Q  183 acacttgtgcacaacaaca 201  Q
    ||  |||| ||||||||||    
T  70424 ac-tttgtacacaacaaca 70441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 30359383 - 30359261
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||| || |||||||| |      |||||||||||||| ||||||||    
T  30359383 acaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatata 30359284  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  30359283 actcacacttgtacacaacaaca 30359261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 33113413 - 33113535
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| ||||||||| || |||||||||||||||||||||| ||| |||||||||      ||||||||||||| |||||||||    
T  33113413 acaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatata 33113512  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    ||||| |||||| ||||||||||    
T  33113513 actcaaacttgtacacaacaaca 33113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3669799 - 3669689
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||| || ||||||||||      ||||||| |||||||||||||||    
T  3669799 acaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatata 3669700  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3669699 actcacacttg 3669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 34834988 - 34834866
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||||| ||| |||||||||| || |||| |||||      |||||||| ||||||||||||||    
T  34834988 acaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatata 34834889  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  34834888 actcacacttgtacacaacaaca 34834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 34835321 - 34835199
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| |||||||| || |||||||||||||||||||||| || ||||||||||      ||||||| |||||||||||||||    
T  34835321 acaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatata 34835222  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||| ||||| |||| |||||    
T  34835221 actcacccttgtacacagcaaca 34835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 147560 - 147454
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||| |||||||| | |||||||||||||||||| |||| || ||||||||||      ||||||||||||||||||||||||||    
T  147560 ccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataact 147461  T
Q  182 cacactt 188  Q
    |||||||    
T  147460 cacactt 147454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 3670172 - 3670062
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||| | | ||||||||||||||| ||||||| || |||| |||||      |||||||||||||||||||||||    
T  3670172 acaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatata 3670073  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  3670072 actcacacttg 3670062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 9309467 - 9309345
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| || | ||||||||||| || ||||| |||||||||||||||| || |||||||| |||      |||||||||||||||||||||    
T  9309467 acaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatata 9309368  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  9309367 actcacacttgcacacaacaaca 9309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 37544536 - 37544658
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||| | | ||| ||||||||||||||| ||||| |  ||||||||||||      |||||||||||| ||| ||||    
T  37544536 acaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgacttata 37544635  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||||    
T  37544636 actcacacttgtgcacaacaaca 37544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 9483233 - 9483305
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||    
T  9483233 acaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaaccttt 9483305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 25561877 - 25561984
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgca 193  Q
    ||||||||||||| || || |||||||||||||||||||||| || |||||||| |||      |||||||||||||||||||||||||||||||||  |    
T  25561877 ccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtaga 25561976  T
Q  194 caacaaca 201  Q
    ||||||||    
T  25561977 caacaaca 25561984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 8794223 - 8794101
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    ||||| |||||| | |||||||||||||  | | |||||||| |||||||||||||| ||||||||||| |||      |||||||||||| ||||||||    
T  8794223 acaccgcactctcacccaaaaccttaagatattaggtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatata 8794124  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  8794123 actcacacttgtacacaacaaca 8794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 30359721 - 30359599
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| |||||||   |||||||||| |||||||||||||| || |||||||| |      ||||||| |||||| ||||||||    
T  30359721 acaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatata 30359622  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  30359621 actcacacttgtacacaacaaca 30359599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 40518690 - 40518584
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||| |||| || |||||||||      ||| |||| |||||||||||||||||||    
T  40518690 cacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactc 40518591  T
Q  183 acacttg 189  Q
    |||||||    
T  40518590 acacttg 40518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 45122103 - 45122213
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||  | || |||||||||| ||||||||||| || ||||||||||      |||||||||||||| ||||||||    
T  45122103 acaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatata 45122202  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  45122203 actcacacttg 45122213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 9482652 - 9482770
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataac 180  Q
    ||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||| || ||||||||||      |||||||| |||||| |||||||||    
T  9482652 accacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataac 9482751  T
Q  181 tcacacttgtgcacaacaaca 201  Q
    |  ||||||| ||||||||||    
T  9482752 t--cacttgtacacaacaaca 9482770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 30441197 - 30441083
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttactta----ttagatgttcaacct------ttttatccgatgtgggaca 174  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    | || ||||||||||      ||||| |||||||||||||    
T  30441197 acaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggaca 30441098  T
Q  175 tataactcacacttg 189  Q
    |||||||||||||||    
T  30441097 tataactcacacttg 30441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 40518180 - 40518061
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc--------tttttatccgatgtgggacatataa 179  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  |||||||| || |||||||||        ||||||||| |||||| ||||||||    
T  40518180 ccacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataa 40518081  T
Q  180 ctcacacttgtgcacaacaa 199  Q
    ||||||||||  ||||||||    
T  40518080 ctcacacttgaacacaacaa 40518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 1513963 - 1514078
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataac 180  Q
    |||||||| ||| ||||||||||||||   |||||||| |||||||||||||||| || ||||||||||      ||||||||||||||||| |||||||    
T  1513963 accacacttttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataac 1514062  T
Q  181 tcacacttgtgcacaa 196  Q
    ||| |||||| |||||    
T  1514063 tcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 5420759 - 5420653
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    ||||||||||   |||||||||||||| |||||||||| |||||||||||||| |||||||||||||      || |||||||||||||||||||||  |    
T  5420759 cacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataatac 5420660  T
Q  183 acacttg 189  Q
    |||||||    
T  5420659 acacttg 5420653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 8918814 - 8918932
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||||||| || | ||||||||||||||||||||||| |  ||||||||||||       |||| |||||||||||| ||||||    
T  8918814 cacactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactc 8918913  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  8918914 acacttgcacacaacaaca 8918932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 43274825 - 43274947
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||  |||||||||||| || | ||||||||||||||||||||||| | || ||||||||      ||||||| ||||||  |||||||    
T  43274825 acaccacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatata 43274924  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||| | ||||||||||    
T  43274925 actcacacttatacacaacaaca 43274947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 45121706 - 45121823
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    ||||||||||  |||||||||||||| || ||||||||| ||||||||||||| || || |||||||      ||||||||||||||||||| | |||||    
T  45121706 cacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtgggaca-acaactc 45121804  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||| ||||||||||    
T  45121805 acacttgtacacaacaaca 45121823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 6876906 - 6877031
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggac-at 175  Q
    |||||||||||||||| |||||||| |||| || || || |||||||| ||||| |||| || |||||||||      ||||||||||||||||||| ||    
T  6876906 aaacaccacactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactat 6877005  T
Q  176 ataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||  ||||||||||    
T  6877006 ataactcacacttgcacacaacaaca 6877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 18372038 - 18372112
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||||| |||||||||||| ||| || |||||||| ||||||||||||| || ||||||||||||    
T  18372038 aaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaaccttt 18372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 9608854 - 9608738
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataact 181  Q
    |||||||| || ||||||||||||||   |||||||||||||| |||||||||| || |||||||||      ||| |||||||| ||||||||||||||    
T  9608854 ccacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataact 9608755  T
Q  182 cacacttgtgcacaaca 198  Q
    ||||||||  |||||||    
T  9608754 cacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 18371707 - 18371807
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    |||||||||||      |||||||||||||| ||||||||    
T  18371707 acaccacactcttacccaaaaccttaaggca-tgggtttatgggtcttcttactta----atgttcaacctttactattttatccgatgtgtgacatata 18371801  T
Q  179 actcac 184  Q
    ||||||    
T  18371802 actcac 18371807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 18380064 - 18380171
Alignment:
Q  86 caccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataa 179  Q
    |||||||||||||  ||||||||||||| ||||||||||| || || ||||||||| || ||||||||||      |||||| |||||||||| ||||||    
T  18380064 caccacactcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttattcgatgtgggatatataa 18380163  T
Q  180 ctcacact 187  Q
    ||||||||    
T  18380164 ctcacact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 34835587 - 34835515
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| ||||||| |||||||| || |||||||||||||||||||||| || |||| |||||||    
T  34835587 acaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaaccttt 34835515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 34835853 - 34835781
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| ||||||| |||||||| || |||||||||||||||||||||| || |||| |||||||    
T  34835853 acaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaaccttt 34835781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 45121959 - 45122066
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||| ||| |||||| ||||||||| || ||||||| |||||||||||||| |  ||||||||||      |||||| |||||||||||||||||||    
T  45121959 ccacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataact 45122058  T
Q  182 cacacttg 189  Q
    ||||||||    
T  45122059 cacacttg 45122066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 9507891 - 9507822
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||||| |||||||||||||| | |||||||||| |||||||||||||| || | ||||||||||    
T  9507891 ccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaaccttt 9507822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 9609194 - 9609125
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||||| | ||||| |||||||  |||||||||||||| |||||||||| |||||||||||||||    
T  9609194 ccacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaaccttt 9609125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 32305586 - 32305517
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||||||| ||||||| | ||||||||| |||| |||||||||| || ||||||||||||    
T  32305586 ccacactcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaaccttt 32305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 45122733 - 45122664
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||| || ||||||||||||| || || |||||||||||||||||||||| || ||||||||||||    
T  45122733 ccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaaccttt 45122664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 198
Target Start/End: Complemental strand, 9309076 - 9308970
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtg--ggacatataactcacacttgtg 191  Q
    |||||||||| ||||| ||||||||||||||||||||||||| | ||||||||| |      ||||||| ||||||  ||||||||||||||||||||      
T  9309076 ccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgca 9308977  T
Q  192 cacaaca 198  Q
    |||||||    
T  9308976 cacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 40579552 - 40579624
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||||||| | |||||||||| ||| |  |||||||||||||||||||||| || ||||||||||||    
T  40579552 acaccacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaaccttt 40579624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 41972254 - 41972151
Alignment:
Q  101 caaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttt------tatccgatgtgggacatataactcacacttgtgcac 194  Q
    |||||| ||| |||| |||||||||||||||| | |||||| || ||||||||||||       |||||||||||||||||||||||||||||||  |||    
T  41972254 caaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacac 41972155  T
Q  195 aaca 198  Q
    ||||    
T  41972154 aaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 1013921 - 1014027
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    ||||||||||  ||||||  ||||||| ||||||||| |||||||||||||||  | |||||||| |||      ||||||||||||| |||||||||||    
T  1013921 cacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataactc 1014020  T
Q  183 acacttg 189  Q
    |||||||    
T  1014021 acacttg 1014027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 1014291 - 1014401
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| |||||| |  | ||||| |||||||||||||||| || ||||||||||      ||||||| |||||  ||||||||    
T  1014291 acaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatata 1014390  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  1014391 actcacacttg 1014401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 5915979 - 5915928
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctctta 136  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  5915979 acaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 32640583 - 32640682
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactca 183  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||| |     |||||||||||      |||||||||||||| |||| ||||||||    
T  32640583 acactcttacccaaaaccttaaggcaatgggtttatcggtcctcttacct-----atgttcaacctttactcttttatccgatgtgagacagataactca 32640677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 41416251 - 41416322
Alignment:
Q  119 ggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcac 184  Q
    ||||||||| ||||||||||||| || ||||||||||||      |||||||||||||||||||||||||||    
T  41416251 ggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 189
Target Start/End: Complemental strand, 45123108 - 45123008
Alignment:
Q  93 ctcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacac 186  Q
    |||||| |||||||||||||  | | |||||||||||| |||||||||  || |||| |||||||      |||||||||||||||||||||||||||||    
T  45123108 ctcttacccaaaaccttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactcacac 45123011  T
Q  187 ttg 189  Q
    |||    
T  45123010 ttg 45123008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 12156694 - 12156745
Alignment:
Q  75 agagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatg 126  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||||||||    
T  12156694 agagacttaaacatcacactcttacccaaaaccttaagacaatgggtttatg 12156745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 147865 - 147819
Alignment:
Q  155 tttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||    
T  147865 tttttatcagatgtgggacatataactcacacttgcacacaacaaca 147819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 6732007 - 6731906
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttttatccgatgtgggacatataactcac 184  Q
    ||||||||||||||  ||||||||||||||| ||  ||||||||| |||||||||   |  | | | |   |||||||||||||||||||||||||||||    
T  6732007 acaccacactcttactcaaaaccttaaggcaatgaatttatgggttctcttactttcaacctttacta---ttttatccgatgtgggacatataactcac 6731911  T
Q  185 acttg 189  Q
    |||||    
T  6731910 acttg 6731906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 18372785 - 18372854
Alignment:
Q  125 tgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacactt 188  Q
    ||||||||||||||||| || ||||||||||||      |||||||||||| ||||||||||||||||||    
T  18372785 tgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactt 18372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 27856243 - 27856194
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctct 134  Q
    |||| ||||| |||||||||| |||||||||||||||||||| |||||||    
T  27856243 acacaacacttttatccaaaatcttaaggcagtgggtttatgagtcctct 27856194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 147932 - 147888
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    |||||||||||||| |||||||||||||||| | |||||||||||    
T  147932 acaccacactcttacccaaaaccttaaggcaataggtttatgggt 147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 18372494 - 18372526
Alignment:
Q  156 ttttatccgatgtgggacatataactcacactt 188  Q
    |||||||||||||||||||||||||||||||||    
T  18372494 ttttatccgatgtgggacatataactcacactt 18372526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 6651606 - 6651555
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctctta 136  Q
    |||||||||||||| |||||||||||||||| ||  ||||||||| ||||||    
T  6651606 acaccacactcttacccaaaaccttaaggcaatgaatttatgggttctctta 6651555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 40991850 - 40991795
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |  ||||||||||    
T  40991850 ccaaaaccttgaggcattgggtttatgggtcctctcacttatgaagtgttcaacct 40991795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 8919190 - 8919220
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggca 115  Q
    |||||||||||||||||||||||||||||||    
T  8919190 acaccacactcttatccaaaaccttaaggca 8919220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 18372342 - 18372411
Alignment:
Q  125 tgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacactt 188  Q
    |||||| |||||||||| || ||||||||||||      |||||||||||| ||||||||||||||||||    
T  18372342 tgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 18372411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 18372656 - 18372720
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||||| |||||||||   |||| |||||||||| |||||||||||||| || ||||||||||||    
T  18372656 cacactcttacccaaaacct---ggcaatgggtttatgagtcctcttacttataag-tgttcaaccttt 18372720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 5915908 - 5915863
Alignment:
Q  155 tttttatccgatgtgggacatataactcacacttgtgcacaacaac 200  Q
    ||||||||| |||| ||||||||||||||||||||  |||||||||    
T  5915908 tttttatccaatgtaggacatataactcacacttgcacacaacaac 5915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 22304001 - 22304116
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttttatccgatgtgggacatataactcac 184  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||  ||  ||  ||||||| |||||||||||||||||||||    
T  22304001 acaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataagacctt-tactattttatctgatgtgggacatataactcac 22304099  T
Q  185 acttgtgcacaacaaca 201  Q
    |||||| ||||||||||    
T  22304100 acttgtacacaacaaca 22304116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 35946634 - 35946515
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||| || ||||||||||      |||||||||||||||||||||||    
T  35946634 acaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatata 35946535  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||| |||||||    
T  35946534 actcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 43346837 - 43346959
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||| ||||||||||| || ||||||||||      ||||||| |||||||||||||||    
T  43346837 acaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatata 43346936  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  43346937 actcacacttgtacacaacaaca 43346959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 37990685 - 37990807
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||| || |||||||| |      ||||||||||||||| |||||||    
T  37990685 acaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatata 37990784  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  37990785 actcacacttgtacacaacaaca 37990807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 52634783 - 52634666
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||  |||||||||||      |||||||||||||||||||||||||    
T  52634783 cacactcttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactc 52634685  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||| ||||||||||    
T  52634684 acacttgtacacaacaaca 52634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 32462946 - 32463069
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttt-------tatccgatgtgggacatat 177  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||| |||||||||| || | |||||||||||       |||||||||||||||||||    
T  32462946 acaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatat 32463045  T
Q  178 aactcacacttgtgcacaacaaca 201  Q
    ||||||||||||| ||||||||||    
T  32463046 aactcacacttgtacacaacaaca 32463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 29644951 - 29645070
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||||| || |||| |||||      ||||||||||||||||||||||||||    
T  29644951 ccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataact 29645050  T
Q  182 cacacttgtgcacaacaaca 201  Q
     |||||||  ||||||||||    
T  29645051 tacacttgcacacaacaaca 29645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 12114608 - 12114730
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| || |||||||||      ||| |||||||||||||| |||||    
T  12114608 acaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatata 12114707  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    ||| |||||||  ||||||||||    
T  12114708 acttacacttgcacacaacaaca 12114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 15772966 - 15772856
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| || |||||||| |      ||||||||||| |||||||||||    
T  15772966 acaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatata 15772867  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  15772866 actcacacttg 15772856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 22304681 - 22304571
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || | ||||||||      |||||||||||||||||||||||    
T  22304681 acaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatata 22304582  T
Q  179 actcacacttg 189  Q
     ||||||||||    
T  22304581 gctcacacttg 22304571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 37991023 - 37991145
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  || |||||| ||||||||||||||| || ||||||||||      |||||||| ||||| ||||||||    
T  37991023 acaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatata 37991122  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  37991123 actcacacttgtacacaacaaca 37991145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 45901826 - 45901703
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttttt-------atccgatgtgggacatat 177  Q
    |||||||||||||| | ||||| |||||||  || ||||||| |||||||||||||| || ||||||||||||||       ||||||||||||||||||    
T  45901826 acaccacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatat 45901727  T
Q  178 aactcacacttgtgcacaacaaca 201  Q
    ||||||||||||| ||||||||||    
T  45901726 aactcacacttgtacacaacaaca 45901703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 54017862 - 54017982
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  | |||||||| |||||||||||||| || ||||||||||      ||||||||||||| |||||||||    
T  54017862 acaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatata 54017961  T
Q  179 actcacacttgtgcacaacaa 199  Q
    |||||||||||  ||||||||    
T  54017962 actcacacttgcacacaacaa 54017982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 8328016 - 8327897
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||| |  |||||||||| ||||||||||| |||| |||| |||      |||||||||||||||||||||||    
T  8328016 acaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatata 8327917  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  8327916 actcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 25739475 - 25739594
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||| || ||| || ||||||||||||||||||||||  |||||||||| |||      |||||||||||||||||||||||||    
T  25739475 cacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactc 25739574  T
Q  183 acacttgtgcacaacaacag 202  Q
    |||||||  |||||||||||    
T  25739575 acacttgcacacaacaacag 25739594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 29644630 - 29644737
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| ||||||||||||| || ||||||||||||| ||||||||||| || ||||||||||      ||| ||||||||||||||||||||||    
T  29644630 ccacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataact 29644729  T
Q  182 cacacttg 189  Q
    ||||||||    
T  29644730 cacacttg 29644737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 39389182 - 39389072
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||| || | || ||||||||||      ||||||||||||| |||||||||    
T  39389182 acaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatata 39389083  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  39389082 actcacacttg 39389072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 39914364 - 39914242
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||||||||||  |||||||| | |||||||||||||||||| |||| || ||||||||||      ||||||| |||||| ||||||||    
T  39914364 acaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatata 39914265  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  39914264 actcacacttgcacacaacaaca 39914242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 42342438 - 42342556
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||||||||| || ||| ||||||||||||||||||||| || |||| |||||      ||||||| |||||||||||||||||||    
T  42342438 cacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactc 42342537  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  42342538 acacttgcacacaacaaca 42342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 32462607 - 32462727
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct-------ttttatccgatgtgggacatataac 180  Q
    |||||||||||||||||||||||| ||| | ||||||||| || |||||||||| || ||||||||||       ||| || ||||||||||||||||||    
T  32462607 ccacactcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataac 32462706  T
Q  181 tcacacttgtgcacaacaaca 201  Q
    |||||||||| ||||||||||    
T  32462707 tcacacttgtacacaacaaca 32462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 32589809 - 32589694
Alignment:
Q  91 cactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcac 184  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||  ||||||||||||| ||||||    
T  32589809 cactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatat-actcac 32589711  T
Q  185 acttgtgcacaacaaca 201  Q
    |||||  ||||||||||    
T  32589710 acttgcacacaacaaca 32589694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 33803301 - 33803417
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataact 181  Q
    ||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||  | ||||||||||      ||||||||||||||||||||||||||    
T  33803301 ccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataact 33803400  T
Q  182 cacacttgtgcacaaca 198  Q
    |||| |||  |||||||    
T  33803401 cacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 1634366 - 1634471
Alignment:
Q  91 cactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacctttt-------tatccgatgtgggacatataactca 183  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||| |  |||| ||||||||       |||||||||||||||||||||||||    
T  1634366 cactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactca 1634465  T
Q  184 cacttg 189  Q
    ||||||    
T  1634466 cacttg 1634471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 15773300 - 15773182
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    |||||||||| ||||||| |||||||| || | ||||| |||||||||||||| ||||||||||| |      |||||| ||||||||||||||||||||    
T  15773300 cacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactc 15773201  T
Q  183 acacttgtgcacaacaaca 201  Q
    |||||||  ||||||||||    
T  15773200 acacttgcacacaacaaca 15773182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 54018244 - 54018354
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||  | ||||||||||||||||||||||| || ||||||| ||      ||||||||||||  |||||||||    
T  54018244 acaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatata 54018343  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  54018344 actcacacttg 54018354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 3135119 - 3135224
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||  |||||||||| |||||||||||||||||| || |||||||| || |||||||| |      |||||||||||||||||||||||    
T  3135119 acaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatata 3135218  T
Q  179 actcac 184  Q
    ||||||    
T  3135219 actcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 22303703 - 22303759
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttactt 139  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  22303703 aaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 49336733 - 49336855
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||| ||| ||||| |  ||||||||||||||||||||||||| || || ||||||      ||| ||||||||||| ||||| ||    
T  49336733 acaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgta 49336832  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  49336833 actcacacttgtacacaacaaca 49336855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 53577476 - 53577354
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| |||| ||||||||||| |  |||||||| ||| |||| || | |||||||||||||||      |||||||||||| ||||||||    
T  53577476 acaccacactcttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatata 53577377  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  53577376 actcacacttgcacacaacaaca 53577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 16868393 - 16868471
Alignment:
Q  49 taatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgg 127  Q
    ||||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||||| ||||||||| || ||||||||    
T  16868393 taatgggccaaacgttcagaactataagagacttaaacatcacactcttatccaaaatcttaaggcaatgagtttatgg 16868471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 21832395 - 21832499
Alignment:
Q  91 cactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataactcac 184  Q
    |||||||| |||||||||||||||  || ||||||| |||||||||||||| || |||||||||      ||| ||||| ||||||||||||||||||||    
T  21832395 cactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcac 21832494  T
Q  185 acttg 189  Q
    |||||    
T  21832495 acttg 21832499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 41359814 - 41359883
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||    
T  41359814 ccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaaccttt 41359883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 39935005 - 39935104
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactc 182  Q
    ||||||||||  |||||| |||||||| ||||||||||| ||||||||||||| || ||||||||||      ||||||||||||| |||||||||||||    
T  39935005 cacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 4823767 - 4823657
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||| ||||||||| || |||||||||||||| ||||||| || |||| ||| |      |||||||||||||| ||| ||||    
T  4823767 acaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttata 4823668  T
Q  179 actcacacttg 189  Q
    |||||||||||    
T  4823667 actcacacttg 4823657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 31190121 - 31190007
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||||||||||        |||||||||||| |||||| || ||||||||||||      ||||||||||||||||||||     
T  31190121 acaccacactcttacccaaaaccttaaggc--------tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatc 31190030  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  31190029 actcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 39336280 - 39336385
Alignment:
Q  90 acactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactca 183  Q
    ||||| |||||||||||||||| ||| || |||||||| |||||| |||||| |  ||||||||||      || |||||||||||||||||||||||||    
T  39336280 acactattatccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactca 39336379  T
Q  184 cacttg 189  Q
    ||||||    
T  39336380 cacttg 39336385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 17731897 - 17731994
Alignment:
Q  32 gggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||||| ||||| |||||| ||||| |  | ||| || || ||||| |||||||||||||||  ||||||||||||||| |||||||||||||    
T  17731897 gggagccctgggagcggcaatgggtcaaacgtttaagaccataagtgacttgaacaccacactcttactcaaaaccttaaggcaatgggtttatgggt 17731994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 19033128 - 19033225
Alignment:
Q  32 gggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||||| ||||| |||||| ||||| |  | ||| || || ||||| |||||||||||||||  ||||||||||||||| |||||||||||||    
T  19033128 gggagccctgggagcggcaatgggtcaaacgtttaagaccataagtgacttgaacaccacactcttactcaaaaccttaaggcaatgggtttatgggt 19033225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 45395699 - 45395819
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| ||||||| ||||| || ||||||||||| ||||||||||||| |  |||| |||||      |||||| |||||||||| |||||    
T  45395699 acaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttattcgatgtgggatatata 45395798  T
Q  179 actcacacttgtgcacaacaa 199  Q
    ||| |||||||  ||||||||    
T  45395799 acttacacttgcacacaacaa 45395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 9240261 - 9240142
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttca------acctttttatccgatgtgggacatata 178  Q
    |||||||| |||||||| ||| ||||||| | ||| ||||||||||||||||||||| || ||||||      || | | |||||||||||| |||||||    
T  9240261 acaccacattcttatccgaaatcttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatata 9240162  T
Q  179 actcacacttgtgcacaaca 198  Q
    |||||||||||  |||||||    
T  9240161 actcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 3135500 - 3135629
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttat--gggtcctcttac-----ttattagatgttcaacct------ttttatccgatgtggg 171  Q
    |||||||||||||||| |||||||||||||| |||||||||  ||||||||||||     | || || |||||||| |      ||||||| || |||||    
T  3135500 acaccacactcttatctaaaaccttaaggcaatgggtttatgggggtcctcttactaatataataaggtgttcaacttttactcttttatctgaggtggg 3135599  T
Q  172 acatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||||||| ||||||||||    
T  3135600 acatataactcacacttgtacacaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 11661570 - 11661523
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaacagt 203  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  11661570 ttttatccgatgtgggacatataactcacacttgtacacaccaacagt 11661523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 53118021 - 53118142
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatata 178  Q
    |||| ||||||||| |||||| ||||||||| ||||||| ||  |||||| |||||| || ||||||||||||      ||||||||| ||| |||||||    
T  53118021 acactacactcttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatata 53118119  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||  ||||||||||    
T  53118120 actcacacttgcccacaacaaca 53118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 47964567 - 47964683
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat-tagatgttcaacc------tttttatccgatgtgggacatataac 180  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||| |||||| |||  ||||||||      ||| ||||||||| |||||||| |||    
T  47964567 ccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatag-cgttcaacctccacatttctatccgatgcgggacatacaac 47964665  T
Q  181 tcacacttgtgcacaaca 198  Q
    |||||||||  |||||||    
T  47964666 tcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 33175711 - 33175829
Alignment:
Q  89 cacactcttatccaaaaccttaaggcagtgggt---ttatgggtcctcttacttattagatgttcaacc------tttttatccgatgtgggacatataa 179  Q
    |||||||||| |||||||||||||||  || ||   |||||||| ||||||||||| || |||||||||      ||| |||| |||||| |||||||||    
T  33175711 cacactcttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataa 33175810  T
Q  180 ctcacacttgtgcacaaca 198  Q
    ||||||||||| |||||||    
T  33175811 ctcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 42342139 - 42342192
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    ||||||||||| |||||||||||||||| || ||||||| ||||||||||||||    
T  42342139 ccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttat 42342192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 16870985 - 16871049
Alignment:
Q  65 caggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    |||||| || |||||||||||||| ||||||||| | |||||||||||||| || ||||||||||    
T  16870985 caggaccataagagacttaaacacgacactcttacctaaaaccttaaggcaatgagtttatgggt 16871049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 25755503 - 25755384
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataact 181  Q
    ||||||| ||| ||| ||| ||| | || ||| |||||| |||||||||||||| || | ||||||||||      ||||| |||||| |||||||||||    
T  25755503 ccacacttttacccacaactttaggacaatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataact 25755404  T
Q  182 cacacttgtgcacaacaaca 201  Q
    ||||||||| ||||||||||    
T  25755403 cacacttgtacacaacaaca 25755384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 43346685 - 43346637
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaacagtt 204  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  43346685 ttttatccgatgtgggacatacaactcacacttgcacacaacaacagtt 43346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 51886638 - 51886563
Alignment:
Q  120 gtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttg 189  Q
    ||||||||||||||||||||||  ||||||||||||      |||||| ||||||| |||||||||||||||||||    
T  51886638 gtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttg 51886563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 50612534 - 50612608
Alignment:
Q  121 tttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttg 189  Q
    |||||| |||||||||||||| || ||||||| ||||      ||||||||||||||||||||||||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttg 50612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 16869778 - 16869884
Alignment:
Q  20 ttggggagtccagggagccctggaagcggtaatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgg 119  Q
    |||| |||||| |||||| |||| ||||| |||| || |||  |||| |||  | |||||||||||||||||||||||   ||||||||||||||| ||     
T  16869778 ttggagagtccggggagcgctgggagcggcaatgtgctaaatatccacgaccttaagagacttaaacaccacactcttgctcaaaaccttaaggcaatga 16869877  T
Q  120 gtttatg 126  Q
    |||||||    
T  16869878 gtttatg 16869884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 17735027 - 17735081
Alignment:
Q  75 agagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||||||||| |||||||| ||||||||||||| || || ||||||||||    
T  17735027 agagacttaaacaccgcactcttacccaaaaccttaagtcaatgagtttatgggt 17735081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 19036296 - 19036350
Alignment:
Q  75 agagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgggt 129  Q
    ||||||||||||||| |||||||| ||||||||||||| || || ||||||||||    
T  19036296 agagacttaaacaccgcactcttacccaaaaccttaagtcaatgagtttatgggt 19036350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 33362349 - 33362411
Alignment:
Q  95 cttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||| |||||| ||||||| | ||||||||||||||||||||||||| || | ||||||||||    
T  33362349 cttacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaaccttt 33362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 52635050 - 52634996
Alignment:
Q  87 accacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttat 141  Q
    |||||||||||| |||||| ||||||||| || ||||||||||||||||| ||||    
T  52635050 accacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttat 52634996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 54017594 - 54017636
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgg 127  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  54017594 acaccacactcttacccaaaaccttaaggcaatgggtttatgg 54017636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 22304281 - 22304248
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttg 189  Q
    ||||||||||||||||||||||||||||||||||    
T  22304281 ttttatccgatgtgggacatataactcacacttg 22304248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 44160605 - 44160662
Alignment:
Q  100 ccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    ||||||||||||| || ||||||||||| |||||||| |||| || ||||||||||||    
T  44160605 ccaaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaaccttt 44160662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 48127861 - 48127906
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  48127861 acaccacactcttatccaaaacattaaagcaatgggtttatgggtc 48127906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 12747878 - 12747918
Alignment:
Q  159 tatccgatgtgggacatataactcacacttgtgcacaacaa 199  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  12747878 tatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 46546369 - 46546441
Alignment:
Q  83 aaacaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    ||||| ||||||||||  ||||||||||||||| ||||||||||| | |||| |||||| |  ||||||||||    
T  46546369 aaacatcacactcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacct 46546441  T

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Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 12749278 - 12749211
Alignment:
Q  88 ccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct 155  Q
    ||||||||||||| |||||||||| ||| | |||||||||||||||  |||||| |  ||||||||||    
T  12749278 ccacactcttatcaaaaaccttaatgcaattggtttatgggtcctcacacttataaagtgttcaacct 12749211  T

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Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 42584868 - 42584970
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||   ||||| |||||| || | ||||||||| ||||||||||||| || ||||||| ||      || ||||||||||||||||||||    
T  42584868 acaccacactctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggacatata 42584967  T
Q  179 act 181  Q
    |||    
T  42584968 act 42584970  T

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Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 37726539 - 37726506
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttg 189  Q
    |||||||||||||| |||||||||||||||||||    
T  37726539 ttttatccgatgtgagacatataactcacacttg 37726506  T

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Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 53596072 - 53596027
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||| |||||||||||||| |  |||||||||||||    
T  53596072 acaccacactcttacccaaaaccttaaggtaacgggtttatgggtc 53596027  T

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Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 53596387 - 53596342
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtc 130  Q
    |||||||||||||| |||||||||||||| |  |||||||||||||    
T  53596387 acaccacactcttacccaaaaccttaaggtaacgggtttatgggtc 53596342  T

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Target: scaffold0078 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 5469 - 5349
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||      || |||||||||||| |||||||    
T  5469 acaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatata 5370  T
Q  179 actcacacttgtgcacaacaa 199  Q
    |||||||||||  ||||||||    
T  5369 actcacacttgcacacaacaa 5349  T

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Target: scaffold0078; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 5094 - 4972
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||||||||||| |||||||| ||||||| || ||||||||||| | |||||||| |||| || |||||      || | ||||||||| ||||||||    
T  5094 acaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatata 4995  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    | |||||||||  ||||||||||    
T  4994 attcacacttgcacacaacaaca 4972  T

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Target: scaffold0391 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 1152 - 1274
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatata 178  Q
    |||||| ||||||| |||||||||||||||| |||||||||| ||||| || ||||| || ||||||||||      |||||||| ||||||||||||||    
T  1152 acaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatata 1251  T
Q  179 actcacacttgtgcacaacaaca 201  Q
    |||||||||||| ||||||||||    
T  1252 actcacacttgtacacaacaaca 1274  T

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Target: scaffold0391; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 1737 - 1802
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttc 150  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||| |||||| || |||||    
T  1737 acaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

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Target: scaffold0391; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 3108 - 3153
Alignment:
Q  156 ttttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||    
T  3108 ttttatccgatgtgggacatataactcacacctgcacacaacaaca 3153  T

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Target: scaffold0734 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 5867 - 5767
Alignment:
Q  107 cttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgcacaacaac 200  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||      |||||||||||||| |||||||||||||||||||  |||||||||    
T  5867 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaac 5768  T
Q  201 a 201  Q
    |    
T  5767 a 5767  T

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Target: scaffold0734; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 5509 - 5386
Alignment:
Q  85 acaccacactcttatccaaaacctt-aaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatat 177  Q
    |||||||||||||| |||||| ||| ||| || |  ||||||||| |||||||||||| || ||||||||||||      ||||||||||| ||||||||    
T  5509 acaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatat 5410  T
Q  178 aactcacacttgtgcacaacaaca 201  Q
    ||||||||||||  ||||||||||    
T  5409 aactcacacttgcacacaacaaca 5386  T

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Target: scaffold0504 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 10192 - 10279
Alignment:
Q  120 gtttatgggtcctcttacttattagatgttcaaccttt------ttatccgatgtgggacatataactcacacttgtgcacaacaaca 201  Q
    |||||||||||||||||||||| || |||||||| |||      |||||||||||| |||||||||||||||||||||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaaca 10279  T

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Target: scaffold0171 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 17519 - 17624
Alignment:
Q  102 aaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaacct------ttttatccgatgtgggacatataactcacacttgtgcaca 195  Q
    |||||||||||||  ||||||||||||||||||||||||  || ||||||||||      ||||||| |||||| |||||||||||||||||||  ||||    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacaca 17618  T
Q  196 acaaca 201  Q
    ||||||    
T  17619 acaaca 17624  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 197874 - 197799
Alignment:
Q  50 aatgggccaaacttccaggactattagagacttaaacaccacactcttatccaaaaccttaaggcagtgggtttatgg 127  Q
    |||| ||||||| |||||||| || |||||||||||||||||||||||||||  || ||||||||| ||| |||||||    
T  197874 aatgagccaaacgtccaggaccataagagacttaaacaccacactcttatcc--aatcttaaggcaatggatttatgg 197799  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 39870 - 39830
Alignment:
Q  159 tatccgatgtgggacatataactcacacttgtgcacaacaa 199  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  39870 tatccgatgtgggacatataactcacacttgaacacaacaa 39830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 47472 - 47400
Alignment:
Q  85 acaccacactcttatccaaaaccttaaggcagtgggtttatgggtcctcttacttattagatgttcaaccttt 157  Q
    |||||||| | ||| ||||||| |||||||| ||||||||||| | ||||||||||| || ||||||| ||||    
T  47472 acaccacatttttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaacttt 47400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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