View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14973_low_6 (Length: 213)
Name: NF14973_low_6
Description: NF14973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14973_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 8518118 - 8518305
Alignment:
| Q |
13 |
attattctctttattttttctctttcaaggtgtgtgtatatatgggtgtcgaaataacatttttcatgataatattggttatatttataagtgaaagtaa |
112 |
Q |
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| T |
8518118 |
attattctctttattttttctctttcaaggtgtgtgtatatatgggtgtcgaaataacatttttcatgataatattggttatatttataagtgaaagtaa |
8518217 |
T |
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| Q |
113 |
ccccttactctaagattttcttataattatcgtattttggttgtatatgagacactacctatattgaagttcatacaaagttgaaagt |
200 |
Q |
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| T |
8518218 |
ccccttactctaagattttcttataattatcgtattttggttgtatatgagacactacctatattgaagttcatacaaagttgaaagt |
8518305 |
T |
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