View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14974_high_1 (Length: 341)

Name: NF14974_high_1
Description: NF14974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14974_high_1
NF14974_high_1
[»] chr2 (1 HSPs)
chr2 (55-341)||(32328045-32328325)


Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 55 - 341
Target Start/End: Original strand, 32328045 - 32328325
Alignment:
Q  55 tgtgattcattcacttcttcaagtacataaaaatgacatgtaacaaaggatatgttaatgtcactatgaaaaattttgaagtacaaaaggtccaaccagc 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||    
T  32328045 tgtgattcattcacttcttcaagtacataaaaatgacatgtaacaaaggatatgt------cactatgaaaaattttgaagtacaaaaggtccaaccagc 32328138  T
Q  155 tacgacaaactaacatcatggatgacatacacagaatagtagcacgatattgaacccttgatacaataatacattacaagccatcattagtattatggaa 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32328139 tacgacaaactaacatcatggatgacatacacagaatagtagcacgatattgaacccttcatacaataatacattacaagccatcattagtattatggaa 32328238  T
Q  255 gagaagaaaaaccaacatagaaaacgaccttcaaaatatcatgtccatagttcaaaactaaactaaacgacactattttctcttctc 341  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32328239 gagaagaaaaaccaacatagaaaacgaccttcaaaacatcatgtccatagttcaaaactaaactaaacgacactattttctcttctc 32328325  T

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