View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14974_low_10 (Length: 207)
Name: NF14974_low_10
Description: NF14974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14974_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 12472698 - 12472867
Alignment:
| Q |
18 |
ctcaggaagcctgtgatgctgttgcaagatatcatgcaatgaccctccttccatttattccataacaaaactaaggtcaccagacacgcctttagtcaga |
117 |
Q |
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| T |
12472698 |
ctcaggaagcctgtgatgctgttgcaagatatcatgcaatgaccctccttccatttattccataacaaaactaaggtcaccaaacacgcctttagtctga |
12472797 |
T |
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| Q |
118 |
agtgtcggtgctacatatgttggaatgtaacaaactgcatgacaccttataatataaggagaatcaacga |
187 |
Q |
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| T |
12472798 |
agtgtcggtgctacatatgttggaatgtaacaaactgcatgacaccttacaatataaggagaatcaacga |
12472867 |
T |
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